Query 036034
Match_columns 482
No_of_seqs 409 out of 3850
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:45:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.4E-43 4.7E-48 375.3 27.5 321 5-325 294-722 (768)
2 3rgz_A Protein brassinosteroid 100.0 3E-42 1E-46 365.1 27.7 320 2-321 340-742 (768)
3 3v47_A TOLL-like receptor 5B a 100.0 2.4E-39 8.3E-44 323.3 24.8 321 5-325 30-413 (455)
4 3v47_A TOLL-like receptor 5B a 100.0 9.8E-39 3.4E-43 318.9 23.1 303 1-303 50-412 (455)
5 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-37 1E-41 319.5 32.5 319 1-320 52-534 (606)
6 4eco_A Uncharacterized protein 100.0 9.7E-39 3.3E-43 330.8 20.9 317 1-325 202-583 (636)
7 3t6q_A CD180 antigen; protein- 100.0 2E-37 6.9E-42 320.7 30.5 319 6-325 34-443 (606)
8 4eco_A Uncharacterized protein 100.0 2.3E-38 7.7E-43 328.0 22.4 312 3-322 247-602 (636)
9 3vq2_A TLR4, TOLL-like recepto 100.0 4.8E-37 1.6E-41 317.8 29.4 320 5-325 32-515 (606)
10 2id5_A Lingo-1, leucine rich r 100.0 3.3E-37 1.1E-41 309.6 25.9 297 5-301 32-335 (477)
11 3t6q_A CD180 antigen; protein- 100.0 2E-36 6.8E-41 313.2 31.6 322 2-324 102-517 (606)
12 2z63_A TOLL-like receptor 4, v 100.0 4E-37 1.4E-41 316.1 26.1 160 164-324 345-511 (570)
13 4ecn_A Leucine-rich repeat pro 100.0 5.9E-37 2E-41 322.9 25.0 316 1-325 444-823 (876)
14 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-36 4.2E-41 308.9 25.2 306 5-321 21-458 (520)
15 2id5_A Lingo-1, leucine rich r 100.0 4.3E-36 1.5E-40 301.5 28.1 314 7-323 13-336 (477)
16 4ecn_A Leucine-rich repeat pro 100.0 7.6E-37 2.6E-41 322.1 23.0 298 21-325 440-800 (876)
17 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.7E-36 2.3E-40 306.0 28.1 305 5-320 52-486 (562)
18 3o6n_A APL1; leucine-rich repe 100.0 5.2E-36 1.8E-40 292.9 25.6 307 3-321 43-353 (390)
19 3oja_B Anopheles plasmodium-re 100.0 8E-36 2.7E-40 307.1 25.7 307 4-322 50-360 (597)
20 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-35 5.5E-40 316.7 28.1 318 4-321 23-415 (844)
21 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-34 4E-39 303.9 32.9 318 7-324 250-626 (680)
22 2z63_A TOLL-like receptor 4, v 100.0 3.8E-35 1.3E-39 301.5 27.8 318 6-325 29-488 (570)
23 2z81_A CD282 antigen, TOLL-lik 100.0 4.2E-36 1.4E-40 307.1 20.4 317 6-325 27-491 (549)
24 2z7x_B TOLL-like receptor 1, v 100.0 2.4E-35 8.2E-40 299.4 25.6 305 8-320 3-434 (520)
25 1ziw_A TOLL-like receptor 3; i 100.0 6.2E-35 2.1E-39 306.0 29.6 317 5-321 25-444 (680)
26 3j0a_A TOLL-like receptor 5; m 100.0 4.9E-35 1.7E-39 312.9 28.1 322 1-322 44-441 (844)
27 3o6n_A APL1; leucine-rich repe 100.0 7.4E-35 2.5E-39 284.7 24.2 288 3-303 67-356 (390)
28 4g8a_A TOLL-like receptor 4; l 100.0 6.9E-34 2.3E-38 295.8 32.1 318 6-323 53-583 (635)
29 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.6E-34 8.8E-39 294.3 28.0 309 5-321 31-464 (562)
30 3oja_B Anopheles plasmodium-re 100.0 1.8E-34 6.2E-39 297.0 25.2 288 3-303 73-362 (597)
31 1ogq_A PGIP-2, polygalacturona 100.0 3.6E-35 1.2E-39 277.5 17.9 249 29-297 50-302 (313)
32 4fmz_A Internalin; leucine ric 100.0 1.2E-33 4.1E-38 271.7 28.1 299 3-320 42-346 (347)
33 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-34 5.8E-39 295.2 20.6 290 5-299 5-423 (549)
34 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-34 4.1E-39 274.0 17.3 248 6-273 51-302 (313)
35 1o6v_A Internalin A; bacterial 100.0 2.7E-33 9.2E-38 280.0 27.1 299 2-321 65-389 (466)
36 4fmz_A Internalin; leucine ric 100.0 5.5E-33 1.9E-37 267.2 25.5 279 2-299 63-346 (347)
37 3bz5_A Internalin-J, INLJ; leu 100.0 8.4E-33 2.9E-37 274.4 27.3 295 2-321 39-353 (457)
38 1xku_A Decorin; proteoglycan, 100.0 2.1E-32 7E-37 261.1 27.9 287 6-317 32-329 (330)
39 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-32 4E-37 263.0 25.7 286 6-317 34-330 (332)
40 1o6v_A Internalin A; bacterial 100.0 2.5E-32 8.6E-37 272.9 25.7 281 1-301 86-390 (466)
41 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-31 3.8E-36 279.2 30.6 302 1-302 72-583 (635)
42 1xku_A Decorin; proteoglycan, 100.0 8.4E-32 2.9E-36 256.9 26.0 269 5-297 52-330 (330)
43 3bz5_A Internalin-J, INLJ; leu 100.0 8E-32 2.8E-36 267.3 25.7 299 2-325 61-392 (457)
44 2ft3_A Biglycan; proteoglycan, 100.0 8E-32 2.8E-36 257.2 23.0 269 4-297 53-331 (332)
45 2z66_A Variable lymphocyte rec 100.0 5.1E-31 1.7E-35 248.8 19.6 285 7-312 9-300 (306)
46 1jl5_A Outer protein YOPM; leu 100.0 2E-30 6.8E-35 257.1 23.0 250 3-276 9-291 (454)
47 1jl5_A Outer protein YOPM; leu 100.0 2.4E-29 8.2E-34 249.3 30.4 277 5-321 91-371 (454)
48 4fcg_A Uncharacterized protein 100.0 3.2E-30 1.1E-34 245.0 19.8 234 29-275 81-314 (328)
49 2z80_A TOLL-like receptor 2, v 100.0 1.3E-30 4.3E-35 251.1 15.6 280 5-303 31-318 (353)
50 2z66_A Variable lymphocyte rec 100.0 5.2E-30 1.8E-34 241.8 19.2 273 32-325 10-292 (306)
51 4fcg_A Uncharacterized protein 100.0 8.9E-30 3.1E-34 242.0 19.6 233 52-298 80-313 (328)
52 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-32 5.4E-37 274.5 -2.2 320 3-322 26-413 (461)
53 1z7x_W Ribonuclease inhibitor; 100.0 1.7E-32 5.9E-37 274.2 -2.0 318 4-321 2-384 (461)
54 3zyi_A Leucine-rich repeat-con 100.0 1.5E-28 5.2E-33 244.5 26.4 249 7-276 56-304 (452)
55 3zyj_A Leucine-rich repeat-con 100.0 1.8E-28 6.1E-33 243.2 26.7 249 7-276 45-293 (440)
56 1ozn_A Reticulon 4 receptor; N 100.0 3E-29 1E-33 234.0 18.8 257 8-309 14-271 (285)
57 1ozn_A Reticulon 4 receptor; N 100.0 3.4E-29 1.1E-33 233.7 18.9 208 4-228 31-239 (285)
58 3zyi_A Leucine-rich repeat-con 100.0 4E-28 1.4E-32 241.5 26.0 251 30-302 55-306 (452)
59 3zyj_A Leucine-rich repeat-con 100.0 5.3E-28 1.8E-32 239.8 26.2 250 30-301 44-294 (440)
60 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.6E-34 244.6 12.2 257 5-279 52-318 (353)
61 3g06_A SSPH2 (leucine-rich rep 100.0 5.2E-27 1.8E-31 239.6 28.1 262 6-307 41-305 (622)
62 1wwl_A Monocyte differentiatio 100.0 1E-29 3.4E-34 240.3 5.3 254 25-300 39-310 (312)
63 1wwl_A Monocyte differentiatio 100.0 1.4E-29 4.7E-34 239.3 5.7 248 4-276 42-310 (312)
64 3o53_A Protein LRIM1, AGAP0063 100.0 1.8E-29 6E-34 239.2 5.6 266 7-303 12-280 (317)
65 3o53_A Protein LRIM1, AGAP0063 99.9 4.6E-29 1.6E-33 236.3 5.6 245 3-278 32-279 (317)
66 3oja_A Leucine-rich immune mol 99.9 8.8E-28 3E-32 240.4 11.2 236 28-294 33-270 (487)
67 3oja_A Leucine-rich immune mol 99.9 5.1E-28 1.7E-32 242.2 9.4 230 51-311 32-263 (487)
68 2z62_A TOLL-like receptor 4, v 99.9 4.8E-25 1.6E-29 204.5 21.0 228 9-277 11-239 (276)
69 2z62_A TOLL-like receptor 4, v 99.9 5.6E-25 1.9E-29 204.1 21.0 227 33-303 11-241 (276)
70 3g06_A SSPH2 (leucine-rich rep 99.9 2.3E-24 7.8E-29 220.1 27.4 255 29-323 40-300 (622)
71 2o6q_A Variable lymphocyte rec 99.9 5.9E-24 2E-28 196.4 23.2 201 7-251 18-218 (270)
72 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4E-29 201.3 17.9 224 10-263 24-247 (272)
73 3rfs_A Internalin B, repeat mo 99.9 4.7E-25 1.6E-29 203.9 14.6 229 29-287 19-247 (272)
74 1p9a_G Platelet glycoprotein I 99.9 7.5E-24 2.6E-28 197.4 21.2 201 2-226 7-207 (290)
75 2o6q_A Variable lymphocyte rec 99.9 2E-23 6.8E-28 192.8 23.3 183 78-277 38-220 (270)
76 1p9a_G Platelet glycoprotein I 99.9 1.8E-23 6.1E-28 194.8 21.6 203 25-275 6-208 (290)
77 2ca6_A RAN GTPase-activating p 99.9 2.6E-26 8.8E-31 223.8 -1.9 115 188-302 185-319 (386)
78 3ogk_B Coronatine-insensitive 99.9 3.7E-26 1.2E-30 235.6 -0.8 316 4-321 163-527 (592)
79 2ast_B S-phase kinase-associat 99.9 4.2E-25 1.4E-29 211.1 5.7 254 6-283 48-314 (336)
80 2ca6_A RAN GTPase-activating p 99.9 8E-26 2.7E-30 220.3 0.5 116 162-277 183-318 (386)
81 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 7.8E-30 214.9 3.5 257 9-278 2-300 (362)
82 4glp_A Monocyte differentiatio 99.9 5E-24 1.7E-28 201.0 12.2 228 29-276 64-308 (310)
83 2ast_B S-phase kinase-associat 99.9 6.9E-25 2.4E-29 209.6 4.7 254 30-306 48-313 (336)
84 3goz_A Leucine-rich repeat-con 99.9 4.8E-25 1.7E-29 212.6 2.6 255 33-304 2-302 (362)
85 2xwt_C Thyrotropin receptor; s 99.9 6.3E-23 2.2E-27 185.9 15.1 206 19-249 24-237 (239)
86 3ogk_B Coronatine-insensitive 99.9 3.4E-25 1.2E-29 228.4 -0.1 299 3-304 190-531 (592)
87 2xwt_C Thyrotropin receptor; s 99.9 1.1E-22 3.8E-27 184.3 15.7 185 44-251 25-218 (239)
88 4glp_A Monocyte differentiatio 99.9 4.8E-23 1.6E-27 194.3 13.7 228 5-252 64-308 (310)
89 3m19_A Variable lymphocyte rec 99.9 6.8E-22 2.3E-26 180.4 20.0 179 6-204 15-193 (251)
90 1h6u_A Internalin H; cell adhe 99.9 4.6E-22 1.6E-26 187.1 15.7 195 25-252 37-231 (308)
91 3m19_A Variable lymphocyte rec 99.9 2.1E-21 7.1E-26 177.2 19.6 177 30-226 15-191 (251)
92 1h6u_A Internalin H; cell adhe 99.9 5E-22 1.7E-26 186.9 14.4 211 31-276 21-231 (308)
93 2o6s_A Variable lymphocyte rec 99.9 5.4E-22 1.8E-26 175.7 13.6 161 5-165 28-188 (208)
94 2p1m_B Transport inhibitor res 99.9 2E-24 6.7E-29 222.8 -4.3 314 4-319 104-493 (594)
95 2o6s_A Variable lymphocyte rec 99.9 8.2E-21 2.8E-25 168.1 16.2 179 8-213 10-188 (208)
96 4ay9_X Follicle-stimulating ho 99.9 1.2E-20 4.1E-25 180.9 18.5 122 8-132 12-135 (350)
97 4ay9_X Follicle-stimulating ho 99.9 1.5E-20 5.1E-25 180.3 18.2 244 32-300 12-260 (350)
98 2p1m_B Transport inhibitor res 99.8 3E-23 1E-27 214.0 -5.5 315 3-320 128-519 (594)
99 3cvr_A Invasion plasmid antige 99.8 2.9E-20 1E-24 187.5 16.3 187 30-261 60-253 (571)
100 3cvr_A Invasion plasmid antige 99.8 5.7E-20 2E-24 185.4 16.9 187 54-285 60-253 (571)
101 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.4E-24 168.8 13.6 173 25-228 42-214 (291)
102 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.1E-24 183.8 15.2 172 26-228 40-211 (605)
103 2v9t_B SLIT homolog 2 protein 99.8 8.7E-19 3E-23 156.2 16.7 123 8-133 14-136 (220)
104 1m9s_A Internalin B; cell inva 99.8 4.7E-19 1.6E-23 180.7 16.1 172 3-205 41-212 (605)
105 2xot_A Amphoterin-induced prot 99.8 4.3E-19 1.5E-23 170.8 14.3 176 32-227 21-202 (361)
106 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-18 5.2E-23 154.6 16.4 121 8-131 14-135 (220)
107 1h6t_A Internalin B; cell adhe 99.8 3.3E-19 1.1E-23 166.1 12.4 189 31-252 26-214 (291)
108 2v9t_B SLIT homolog 2 protein 99.8 2.2E-18 7.6E-23 153.5 16.8 153 145-300 14-166 (220)
109 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-18 8.4E-23 153.2 16.0 155 145-302 14-169 (220)
110 4ezg_A Putative uncharacterize 99.8 9.1E-19 3.1E-23 153.3 12.3 154 26-204 41-195 (197)
111 3e6j_A Variable lymphocyte rec 99.8 2.2E-18 7.6E-23 154.6 15.0 145 8-156 22-173 (229)
112 2xot_A Amphoterin-induced prot 99.8 1.9E-18 6.4E-23 166.3 14.6 176 8-203 21-202 (361)
113 3e6j_A Variable lymphocyte rec 99.8 7.1E-18 2.4E-22 151.3 17.4 155 145-303 22-176 (229)
114 1dce_A Protein (RAB geranylger 99.8 1.7E-21 5.9E-26 197.5 -8.8 204 74-293 346-567 (567)
115 1dce_A Protein (RAB geranylger 99.8 2E-21 7E-26 196.9 -9.2 203 50-269 346-567 (567)
116 4ezg_A Putative uncharacterize 99.7 8.5E-18 2.9E-22 147.1 12.5 152 141-300 43-195 (197)
117 1xeu_A Internalin C; cellular 99.7 1.4E-18 4.7E-23 159.3 7.5 165 7-203 21-185 (263)
118 1w8a_A SLIT protein; signaling 99.7 3.2E-17 1.1E-21 142.7 14.1 131 7-140 10-141 (192)
119 1xeu_A Internalin C; cellular 99.7 5.1E-18 1.7E-22 155.5 7.6 168 28-227 18-185 (263)
120 2ell_A Acidic leucine-rich nuc 99.7 1.2E-17 4.3E-22 142.2 9.3 134 3-138 22-160 (168)
121 4b8c_D Glucose-repressible alc 99.7 8.6E-19 2.9E-23 183.2 1.9 86 46-134 217-302 (727)
122 2je0_A Acidic leucine-rich nuc 99.7 1.1E-17 3.9E-22 139.3 7.7 129 3-133 15-148 (149)
123 3sb4_A Hypothetical leucine ri 99.7 6E-17 2E-21 153.8 13.7 279 5-293 25-328 (329)
124 1w8a_A SLIT protein; signaling 99.7 2.8E-17 9.6E-22 143.1 10.5 173 145-321 11-184 (192)
125 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 178.7 5.3 218 29-275 173-404 (727)
126 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.7E-21 136.7 14.1 128 8-139 13-140 (193)
127 3sb4_A Hypothetical leucine ri 99.7 3.1E-17 1.1E-21 155.7 7.0 256 4-268 48-327 (329)
128 2o6r_A Variable lymphocyte rec 99.7 3.3E-16 1.1E-20 134.5 11.8 135 7-144 9-143 (177)
129 4fdw_A Leucine rich hypothetic 99.6 2.4E-14 8.2E-19 138.8 23.4 240 6-275 114-358 (401)
130 2ell_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 131.9 10.5 132 166-299 24-160 (168)
131 2je0_A Acidic leucine-rich nuc 99.6 4.9E-16 1.7E-20 129.3 9.3 127 166-294 17-148 (149)
132 2wfh_A SLIT homolog 2 protein 99.6 6.5E-15 2.2E-19 128.0 14.4 127 170-300 14-140 (193)
133 1a9n_A U2A', U2A'; complex (nu 99.6 1E-15 3.6E-20 131.2 8.7 130 3-138 17-153 (176)
134 2o6r_A Variable lymphocyte rec 99.6 8.9E-15 3.1E-19 125.5 14.1 131 169-302 10-140 (177)
135 4fdw_A Leucine rich hypothetic 99.6 1.2E-13 4.2E-18 133.8 22.7 241 6-274 136-382 (401)
136 3g39_A Variable lymphocyte rec 99.5 6.4E-14 2.2E-18 119.1 11.9 105 7-114 11-115 (170)
137 1a9n_A U2A', U2A'; complex (nu 99.5 2.2E-14 7.6E-19 122.8 8.8 135 162-300 15-154 (176)
138 3g39_A Variable lymphocyte rec 99.5 5.8E-14 2E-18 119.4 10.2 111 30-143 10-120 (170)
139 2r9u_A Variable lymphocyte rec 99.5 1E-13 3.5E-18 118.2 11.8 104 8-114 15-118 (174)
140 1ds9_A Outer arm dynein; leuci 99.5 2E-16 6.8E-21 138.5 -6.2 162 4-179 17-185 (198)
141 4fs7_A Uncharacterized protein 99.5 2.8E-12 9.6E-17 124.7 21.9 279 2-294 68-374 (394)
142 2r9u_A Variable lymphocyte rec 99.5 2.9E-13 1E-17 115.3 12.0 108 31-141 14-121 (174)
143 1ds9_A Outer arm dynein; leuci 99.5 2.8E-16 9.7E-21 137.5 -7.1 112 161-277 43-155 (198)
144 4aoj_A High affinity nerve gro 99.4 1.2E-13 4E-18 129.9 8.6 76 404-482 41-122 (329)
145 4aw0_A HPDK1, 3-phosphoinositi 99.4 1.4E-13 4.9E-18 127.3 8.5 79 404-482 32-111 (311)
146 4gt4_A Tyrosine-protein kinase 99.4 9.1E-14 3.1E-18 129.4 7.1 77 404-482 26-108 (308)
147 4asz_A BDNF/NT-3 growth factor 99.4 1.2E-13 4E-18 128.1 7.6 76 404-482 13-94 (299)
148 3hyh_A Carbon catabolite-derep 99.4 2.2E-13 7.4E-18 124.3 8.2 80 403-482 12-92 (275)
149 4b9d_A Serine/threonine-protei 99.4 3.8E-13 1.3E-17 126.7 8.7 78 404-482 24-102 (350)
150 4fih_A Serine/threonine-protei 99.4 1.1E-12 3.7E-17 123.4 8.3 76 404-482 74-150 (346)
151 3un9_A NLR family member X1; l 99.4 1.4E-14 4.8E-19 139.1 -4.8 182 5-203 72-283 (372)
152 4fs7_A Uncharacterized protein 99.3 1.1E-10 3.8E-15 113.4 21.2 276 1-291 90-393 (394)
153 4fie_A Serine/threonine-protei 99.3 2.7E-12 9.2E-17 123.8 8.9 77 403-482 150-227 (423)
154 4g31_A Eukaryotic translation 99.3 3.8E-12 1.3E-16 118.1 9.3 72 403-476 4-76 (299)
155 3fpq_A Serine/threonine-protei 99.3 4.4E-12 1.5E-16 116.7 9.2 76 406-482 28-108 (290)
156 2ifg_A High affinity nerve gro 99.3 6.4E-12 2.2E-16 120.0 10.7 101 35-138 14-116 (347)
157 3un9_A NLR family member X1; l 99.3 2.9E-14 1E-18 136.9 -6.2 87 141-227 182-283 (372)
158 3omv_A RAF proto-oncogene seri 99.3 4.1E-12 1.4E-16 117.8 8.4 76 403-482 35-110 (307)
159 4gt6_A Cell surface protein; l 99.3 1.3E-09 4.6E-14 105.7 26.1 283 6-298 65-369 (394)
160 2ifg_A High affinity nerve gro 99.3 1.4E-11 4.7E-16 117.7 11.3 105 8-115 11-117 (347)
161 4gt6_A Cell surface protein; l 99.3 1.1E-09 3.9E-14 106.2 24.8 284 1-297 83-389 (394)
162 3hmm_A TGF-beta receptor type- 99.3 5E-12 1.7E-16 117.9 6.8 74 404-482 3-80 (303)
163 4g3f_A NF-kappa-beta-inducing 99.2 9.7E-12 3.3E-16 116.5 8.2 72 403-482 57-129 (336)
164 3ubd_A Ribosomal protein S6 ki 99.2 3.8E-12 1.3E-16 117.8 4.5 78 404-482 24-105 (304)
165 4b99_A Mitogen-activated prote 99.2 2.2E-11 7.6E-16 117.5 7.7 78 404-482 54-138 (398)
166 4ase_A Vascular endothelial gr 99.2 1.9E-11 6.3E-16 115.9 6.0 85 396-482 56-148 (353)
167 3uto_A Twitchin; kinase, muscl 99.1 2.1E-10 7.1E-15 116.3 9.5 77 403-482 156-233 (573)
168 2c30_A Serine/threonine-protei 99.1 4.6E-10 1.6E-14 105.8 11.3 89 391-482 22-121 (321)
169 3uqc_A Probable conserved tran 99.1 3.5E-10 1.2E-14 104.7 9.6 79 404-482 31-110 (286)
170 3uim_A Brassinosteroid insensi 99.1 7.8E-11 2.7E-15 111.4 4.8 90 391-482 17-106 (326)
171 3v5w_A G-protein coupled recep 99.0 2.8E-10 9.7E-15 115.2 8.5 80 403-482 188-271 (689)
172 1u5q_A Serine/threonine protei 99.0 4.7E-10 1.6E-14 106.9 9.5 80 403-482 53-133 (348)
173 4f9c_A Cell division cycle 7-r 99.0 2.2E-10 7.4E-15 109.3 7.0 78 400-482 17-99 (361)
174 2qkw_B Protein kinase; three-h 99.0 8.5E-11 2.9E-15 110.8 3.8 87 393-482 28-114 (321)
175 2nru_A Interleukin-1 receptor- 99.0 6.2E-10 2.1E-14 104.1 9.7 90 392-482 13-109 (307)
176 4eqm_A Protein kinase; transfe 99.0 7.8E-10 2.7E-14 102.8 9.8 79 404-482 11-90 (294)
177 3v8s_A RHO-associated protein 99.0 1.7E-10 6E-15 112.1 5.5 86 397-482 62-148 (410)
178 4h09_A Hypothetical leucine ri 99.0 8.7E-08 3E-12 92.4 24.3 131 161-295 212-342 (379)
179 3h4j_B AMPK kdaid, SNF1-like p 99.0 4E-10 1.4E-14 106.6 7.6 80 403-482 8-88 (336)
180 3niz_A Rhodanese family protei 99.0 5.1E-10 1.7E-14 104.9 7.8 80 402-482 19-98 (311)
181 1ob3_A PFPK5, cell division co 99.0 6.8E-10 2.3E-14 102.9 8.5 78 404-482 2-79 (288)
182 1o6l_A RAC-beta serine/threoni 99.0 7.1E-10 2.4E-14 105.0 8.7 80 403-482 4-84 (337)
183 3fe3_A MAP/microtubule affinit 99.0 9.5E-10 3.3E-14 103.8 9.6 80 402-482 13-93 (328)
184 4hcu_A Tyrosine-protein kinase 99.0 6.2E-10 2.1E-14 102.0 8.0 75 404-482 10-84 (269)
185 4aw2_A Serine/threonine-protei 99.0 1.9E-10 6.6E-15 112.6 4.8 88 395-482 65-153 (437)
186 3o0g_A Cell division protein k 99.0 1.2E-09 4.3E-14 101.3 9.8 78 404-482 2-80 (292)
187 4fr4_A YANK1, serine/threonine 99.0 6.6E-10 2.3E-14 107.0 7.8 80 403-482 14-94 (384)
188 1fot_A TPK1 delta, CAMP-depend 99.0 7.7E-10 2.6E-14 103.9 8.1 80 403-482 5-85 (318)
189 2eue_A Carbon catabolite derep 99.0 9.4E-10 3.2E-14 101.1 8.5 79 404-482 13-92 (275)
190 2vd5_A DMPK protein; serine/th 99.0 3E-10 1E-14 110.5 5.1 88 395-482 52-140 (412)
191 3c0i_A Peripheral plasma membr 99.0 8.8E-10 3E-14 105.2 8.2 80 403-482 23-105 (351)
192 3qd2_B Eukaryotic translation 99.0 1.4E-09 4.8E-14 102.8 9.6 73 402-476 4-77 (332)
193 3fdn_A Serine/threonine-protei 99.0 1E-09 3.4E-14 101.2 8.4 81 402-482 7-88 (279)
194 2wqm_A Serine/threonine-protei 99.0 1.8E-09 6.3E-14 101.1 10.2 81 402-482 30-111 (310)
195 2ra8_A Uncharacterized protein 99.0 1.8E-10 6.1E-15 109.6 3.3 200 5-225 107-341 (362)
196 3s95_A LIMK-1, LIM domain kina 99.0 1.9E-09 6.6E-14 100.9 10.4 77 403-482 9-86 (310)
197 2yab_A Death-associated protei 99.0 1.7E-09 5.8E-14 103.4 10.0 80 403-482 11-94 (361)
198 2rku_A Serine/threonine-protei 99.0 1.8E-09 6.2E-14 100.3 9.7 80 403-482 14-94 (294)
199 2bdw_A Hypothetical protein K1 99.0 1.8E-09 6E-14 103.5 9.8 80 402-482 27-107 (362)
200 3zgw_A Maternal embryonic leuc 99.0 1.2E-09 4.2E-14 103.7 8.6 79 402-482 8-87 (347)
201 3a8x_A Protein kinase C IOTA t 99.0 1.6E-09 5.5E-14 103.0 9.4 80 403-482 8-89 (345)
202 3gen_A Tyrosine-protein kinase 99.0 1.2E-09 4.2E-14 100.8 8.4 77 402-482 22-98 (283)
203 3sxs_A Cytoplasmic tyrosine-pr 99.0 1.1E-09 3.7E-14 100.3 7.9 76 403-482 7-82 (268)
204 3cok_A Serine/threonine-protei 99.0 1.3E-09 4.4E-14 100.4 8.4 81 402-482 9-90 (278)
205 1rdq_E PKA C-alpha, CAMP-depen 98.9 1.2E-09 4.1E-14 104.1 8.3 80 403-482 40-120 (350)
206 3fxz_A Serine/threonine-protei 98.9 2.3E-09 7.7E-14 99.8 9.9 77 403-482 19-96 (297)
207 3nyv_A Calmodulin-domain prote 98.9 1.9E-09 6.3E-14 107.8 9.8 80 403-482 25-105 (484)
208 3hko_A Calcium/calmodulin-depe 98.9 1.2E-09 4.2E-14 103.9 8.0 84 399-482 21-107 (345)
209 2owb_A Serine/threonine-protei 98.9 2.2E-09 7.6E-14 101.7 9.7 81 402-482 39-120 (335)
210 2pmi_A Negative RE, cyclin-dep 98.9 1.4E-09 4.9E-14 102.2 8.1 78 403-482 4-82 (317)
211 3p86_A Serine/threonine-protei 98.9 1.5E-09 5.1E-14 101.6 8.2 81 400-482 33-113 (309)
212 3cbl_A C-FES, proto-oncogene t 98.9 7.1E-10 2.4E-14 106.9 6.0 79 402-482 112-191 (377)
213 2y0a_A Death-associated protei 98.9 2.4E-09 8.1E-14 101.1 9.4 80 403-482 10-93 (326)
214 3tki_A Serine/threonine-protei 98.9 1.7E-09 6E-14 101.9 8.2 78 403-482 6-84 (323)
215 2h34_A Serine/threonine-protei 98.9 2.7E-09 9.1E-14 99.9 9.3 81 402-482 32-113 (309)
216 1tki_A Titin; serine kinase, m 98.9 2.3E-09 7.8E-14 100.9 8.8 76 403-482 4-80 (321)
217 2qol_A Ephrin receptor; recept 98.9 9.9E-10 3.4E-14 105.7 6.4 78 403-482 44-125 (373)
218 2ra8_A Uncharacterized protein 98.9 4.4E-10 1.5E-14 106.9 3.8 181 3-201 137-341 (362)
219 3kul_A Ephrin type-A receptor 98.9 1.5E-09 5.2E-14 102.4 7.3 78 403-482 48-129 (325)
220 2h6d_A 5'-AMP-activated protei 98.9 2.3E-09 7.7E-14 98.6 8.4 80 403-482 10-90 (276)
221 2y94_A 5'-AMP-activated protei 98.9 1.5E-09 5E-14 107.6 7.5 80 403-482 15-95 (476)
222 3uc3_A Serine/threonine-protei 98.9 2.2E-09 7.5E-14 102.8 8.5 76 403-482 19-95 (361)
223 3is5_A Calcium-dependent prote 98.9 3.1E-09 1.1E-13 98.2 9.2 77 404-482 22-99 (285)
224 3txo_A PKC-L, NPKC-ETA, protei 98.9 1.9E-09 6.6E-14 102.7 7.9 81 402-482 21-103 (353)
225 3t9t_A Tyrosine-protein kinase 98.9 2.2E-09 7.4E-14 98.2 7.9 76 403-482 7-82 (267)
226 3a62_A Ribosomal protein S6 ki 98.9 2.2E-09 7.5E-14 101.4 8.2 80 403-482 16-100 (327)
227 1qcf_A Haematopoetic cell kina 98.9 2.1E-09 7.3E-14 106.3 8.3 79 399-482 183-261 (454)
228 2acx_A G protein-coupled recep 98.9 2.1E-09 7E-14 108.3 8.3 80 403-482 183-263 (576)
229 3gni_B Strad alpha; kinase fol 98.9 3.9E-09 1.3E-13 102.2 9.9 80 402-482 23-105 (389)
230 4dc2_A Protein kinase C IOTA t 98.9 1.6E-09 5.6E-14 104.6 7.0 80 403-482 51-132 (396)
231 2zv2_A Calcium/calmodulin-depe 98.9 2.4E-09 8.2E-14 99.7 8.0 80 403-482 12-117 (298)
232 2psq_A Fibroblast growth facto 98.9 1.8E-09 6.2E-14 103.8 7.3 78 403-482 80-166 (370)
233 2vgo_A Serine/threonine-protei 98.9 2.8E-09 9.6E-14 98.4 8.3 80 403-482 13-93 (284)
234 3ork_A Serine/threonine protei 98.9 1.2E-09 4.2E-14 102.3 5.9 80 403-482 11-95 (311)
235 4agu_A Cyclin-dependent kinase 98.9 4.6E-09 1.6E-13 98.3 9.8 78 404-482 3-81 (311)
236 3soa_A Calcium/calmodulin-depe 98.9 2.7E-09 9.2E-14 104.9 8.5 80 402-482 9-89 (444)
237 3q5i_A Protein kinase; CDPK, m 98.9 3.8E-09 1.3E-13 106.0 9.8 81 402-482 34-125 (504)
238 4h09_A Hypothetical leucine ri 98.9 6E-07 2.1E-11 86.4 24.7 268 5-285 46-355 (379)
239 3bhy_A Death-associated protei 98.9 4.9E-09 1.7E-13 96.7 9.4 79 404-482 5-87 (283)
240 3gbz_A Kinase, CMGC CDK; ssgci 98.9 2.8E-09 9.5E-14 100.8 7.9 82 400-482 30-112 (329)
241 1opk_A P150, C-ABL, proto-onco 98.9 1.3E-09 4.5E-14 108.9 5.9 77 402-482 218-295 (495)
242 3kk8_A Calcium/calmodulin depe 98.9 5.2E-09 1.8E-13 96.6 9.5 79 403-482 5-84 (284)
243 3dbq_A Dual specificity protei 98.9 4.1E-09 1.4E-13 100.2 9.0 79 403-482 8-88 (343)
244 3dtc_A Mitogen-activated prote 98.9 2.6E-09 8.7E-14 97.9 7.2 79 403-482 6-85 (271)
245 2a2a_A Death-associated protei 98.9 5.6E-09 1.9E-13 98.3 9.4 80 403-482 11-94 (321)
246 4euu_A Serine/threonine-protei 98.9 4.9E-09 1.7E-13 98.6 8.9 77 404-482 9-88 (319)
247 3f3z_A Calcium/calmodulin-depe 98.9 6.5E-09 2.2E-13 95.6 9.5 77 403-482 8-85 (277)
248 3pg1_A Mitogen-activated prote 98.9 2.6E-09 9E-14 102.4 7.1 88 395-482 13-113 (362)
249 3c4z_A Rhodopsin kinase; Ser/T 98.9 3.2E-09 1.1E-13 106.5 7.9 80 403-482 184-264 (543)
250 4ejn_A RAC-alpha serine/threon 98.9 1.7E-09 6E-14 106.7 5.9 80 403-482 147-227 (446)
251 1xjd_A Protein kinase C, theta 98.9 2.2E-09 7.7E-14 101.9 6.4 83 400-482 13-97 (345)
252 2zmd_A Dual specificity protei 98.9 4.7E-09 1.6E-13 101.6 8.8 78 404-482 56-135 (390)
253 2w4o_A Calcium/calmodulin-depe 98.9 3.4E-09 1.2E-13 101.0 7.6 76 402-482 51-127 (349)
254 1luf_A Muscle-specific tyrosin 98.9 2.8E-09 9.6E-14 101.3 7.0 80 401-482 44-129 (343)
255 1fmk_A C-SRC, P60-SRC, tyrosin 98.9 2.7E-09 9.1E-14 105.5 7.1 77 401-482 181-257 (452)
256 3kmu_A ILK, integrin-linked ki 98.8 2.3E-09 7.8E-14 98.2 6.1 78 403-482 9-88 (271)
257 2x4f_A Myosin light chain kina 98.8 5.3E-09 1.8E-13 100.5 8.8 74 406-482 91-165 (373)
258 1k9a_A Carboxyl-terminal SRC k 98.8 6E-09 2E-13 102.9 9.3 75 402-482 191-266 (450)
259 4aaa_A Cyclin-dependent kinase 98.8 6.5E-09 2.2E-13 98.3 9.0 79 403-482 24-103 (331)
260 1kob_A Twitchin; kinase, intra 98.8 8.2E-09 2.8E-13 99.6 9.8 77 403-482 50-127 (387)
261 2yex_A Serine/threonine-protei 98.8 8.2E-09 2.8E-13 94.8 9.4 79 402-482 5-84 (276)
262 2h8h_A Proto-oncogene tyrosine 98.8 3.5E-09 1.2E-13 106.9 7.5 77 401-482 264-340 (535)
263 3kfa_A Tyrosine-protein kinase 98.8 1.3E-09 4.5E-14 100.8 4.0 78 401-482 10-88 (288)
264 1x8b_A WEE1HU, WEE1-like prote 98.8 1.1E-08 3.7E-13 94.6 10.1 80 402-482 9-90 (289)
265 2r3i_A Cell division protein k 98.8 7.4E-09 2.5E-13 96.3 9.0 78 404-482 3-81 (299)
266 3lij_A Calcium/calmodulin depe 98.8 6.4E-09 2.2E-13 104.0 9.1 79 403-482 36-115 (494)
267 3dls_A PAS domain-containing s 98.8 1.8E-09 6.3E-14 102.2 4.8 81 402-482 22-108 (335)
268 3mwu_A Calmodulin-domain prote 98.8 5.1E-09 1.7E-13 104.6 8.2 80 402-482 20-100 (486)
269 2wei_A Calmodulin-domain prote 98.8 1E-08 3.5E-13 94.8 9.6 81 401-482 19-100 (287)
270 3l9p_A Anaplastic lymphoma kin 98.8 3.4E-09 1.2E-13 101.8 6.5 78 403-482 70-153 (367)
271 3p1a_A MYT1 kinase, membrane-a 98.8 1E-08 3.6E-13 95.9 9.6 78 404-482 57-136 (311)
272 2pml_X PFPK7, Ser/Thr protein 98.8 2.5E-09 8.5E-14 101.9 5.4 79 403-482 30-122 (348)
273 1ua2_A CAK, cell division prot 98.8 3.6E-09 1.2E-13 100.8 6.4 82 401-482 7-91 (346)
274 3vhe_A Vascular endothelial gr 98.8 2.3E-09 8E-14 102.6 5.0 87 394-482 12-106 (359)
275 2r5t_A Serine/threonine-protei 98.8 4E-09 1.4E-13 101.3 6.5 80 403-482 37-118 (373)
276 2i1m_A Macrophage colony-stimu 98.8 3.8E-09 1.3E-13 100.0 6.3 82 399-482 41-129 (333)
277 2i0e_A Protein kinase C-beta I 98.8 4.7E-09 1.6E-13 100.0 6.9 81 402-482 18-100 (353)
278 4eut_A Serine/threonine-protei 98.8 9E-09 3.1E-13 99.9 8.9 77 404-482 9-88 (396)
279 3soc_A Activin receptor type-2 98.8 4.7E-09 1.6E-13 98.9 6.7 75 403-482 23-101 (322)
280 3eqc_A Dual specificity mitoge 98.8 7.8E-09 2.7E-13 99.0 8.3 78 403-482 32-110 (360)
281 2ivs_A Proto-oncogene tyrosine 98.8 5.8E-09 2E-13 97.8 7.3 79 402-482 21-105 (314)
282 2jam_A Calcium/calmodulin-depe 98.8 1E-08 3.5E-13 95.6 8.9 78 402-482 7-85 (304)
283 1qpc_A LCK kinase; alpha beta 98.8 3.6E-09 1.2E-13 97.4 5.6 76 402-482 11-86 (279)
284 3a7i_A MST3 kinase, serine/thr 98.8 1.4E-08 4.6E-13 94.8 9.6 78 403-482 21-99 (303)
285 3rp9_A Mitogen-activated prote 98.8 4.4E-09 1.5E-13 104.3 6.4 78 404-482 53-136 (458)
286 3mtl_A Cell division protein k 98.8 2.5E-09 8.4E-14 100.9 4.3 77 404-482 2-79 (324)
287 2wtk_C Serine/threonine-protei 98.8 6.6E-09 2.3E-13 97.0 7.2 80 403-482 4-87 (305)
288 3lxp_A Non-receptor tyrosine-p 98.8 1.6E-08 5.6E-13 95.0 9.7 76 405-482 32-114 (318)
289 2clq_A Mitogen-activated prote 98.8 1.6E-08 5.6E-13 93.8 9.6 74 406-482 24-98 (295)
290 2w5a_A Serine/threonine-protei 98.8 1.6E-08 5.4E-13 93.1 9.4 79 403-482 5-86 (279)
291 1p4o_A Insulin-like growth fac 98.8 2.2E-09 7.5E-14 101.1 3.4 84 397-482 18-107 (322)
292 3n9x_A Phosphotransferase; mal 98.8 8.8E-09 3E-13 101.2 7.7 79 403-482 25-109 (432)
293 1t46_A HOMO sapiens V-KIT hard 98.8 6.4E-09 2.2E-13 97.4 6.4 79 402-482 21-106 (313)
294 3eb0_A Putative uncharacterize 98.8 6.5E-09 2.2E-13 100.5 6.6 69 400-475 3-72 (383)
295 3llt_A Serine/threonine kinase 98.8 4.2E-09 1.4E-13 100.9 5.2 85 394-482 25-115 (360)
296 4e5w_A Tyrosine-protein kinase 98.8 1.5E-08 5.1E-13 94.4 8.8 77 404-482 21-104 (302)
297 2pvf_A Fibroblast growth facto 98.8 7.6E-09 2.6E-13 98.0 6.8 78 403-482 34-120 (334)
298 2y7j_A Phosphorylase B kinase 98.8 1.8E-08 6.3E-13 96.5 9.5 87 396-482 86-179 (365)
299 3com_A Serine/threonine-protei 98.8 2E-08 6.7E-13 94.2 9.6 76 402-482 27-103 (314)
300 3i6u_A CDS1, serine/threonine- 98.8 8.2E-09 2.8E-13 100.9 7.1 81 401-482 132-218 (419)
301 2j7t_A Serine/threonine-protei 98.8 1.2E-08 4.1E-13 95.1 7.9 78 402-482 17-95 (302)
302 4fvq_A Tyrosine-protein kinase 98.8 1.2E-08 4E-13 94.5 7.7 77 403-482 7-91 (289)
303 2xrw_A Mitogen-activated prote 98.8 1.4E-08 4.9E-13 97.5 8.6 79 403-482 24-109 (371)
304 2ycf_A Serine/threonine-protei 98.8 1.3E-08 4.3E-13 95.9 8.0 80 402-482 8-93 (322)
305 3tt0_A Basic fibroblast growth 98.8 8.2E-09 2.8E-13 99.7 6.9 78 403-482 68-154 (382)
306 2ac3_A MAP kinase-interacting 98.8 2.4E-08 8.2E-13 93.6 9.9 76 404-482 12-90 (316)
307 3mi9_A Cell division protein k 98.8 1.5E-08 5.2E-13 96.6 8.6 79 403-482 16-103 (351)
308 1phk_A Phosphorylase kinase; g 98.8 1.3E-08 4.4E-13 94.6 8.0 81 402-482 15-103 (298)
309 3ttj_A Mitogen-activated prote 98.8 7.3E-09 2.5E-13 102.6 6.5 79 403-482 61-146 (464)
310 3ugc_A Tyrosine-protein kinase 98.8 8.3E-09 2.8E-13 95.8 6.5 76 404-482 10-92 (295)
311 4f0f_A Serine/threonine-protei 98.8 1.7E-08 5.7E-13 93.3 8.5 75 404-478 19-98 (287)
312 2x7f_A TRAF2 and NCK-interacti 98.8 6.5E-09 2.2E-13 98.0 5.8 84 395-482 15-106 (326)
313 1zy4_A Serine/threonine-protei 98.7 1.5E-08 5E-13 94.4 8.1 69 402-474 4-73 (303)
314 3kn6_A Ribosomal protein S6 ki 98.7 1.8E-08 6.2E-13 94.9 8.7 68 409-482 16-85 (325)
315 3qup_A Tyrosine-protein kinase 98.7 1.5E-08 5.2E-13 95.4 7.9 76 402-478 21-100 (323)
316 1t4h_A Serine/threonine-protei 98.7 2.9E-08 9.9E-13 91.9 9.7 78 404-482 26-108 (290)
317 3fme_A Dual specificity mitoge 98.7 2.4E-08 8.2E-13 92.4 9.0 79 403-482 6-85 (290)
318 2yfx_A Tyrosine-protein kinase 98.7 1.1E-08 3.6E-13 96.7 6.6 78 403-482 29-112 (327)
319 1u59_A Tyrosine-protein kinase 98.7 2.7E-08 9.2E-13 92.0 9.2 76 404-482 9-88 (287)
320 3an0_A Dual specificity mitoge 98.7 2.3E-08 7.7E-13 94.9 8.9 79 402-482 49-129 (340)
321 3cek_A Dual specificity protei 98.7 1.8E-08 6.2E-13 94.4 8.1 84 398-482 22-107 (313)
322 1rjb_A FL cytokine receptor; k 98.7 1E-08 3.6E-13 97.4 6.4 80 401-482 42-128 (344)
323 3oz6_A Mitogen-activated prote 98.7 2.1E-08 7.4E-13 97.0 8.7 81 401-482 6-90 (388)
324 1io0_A Tropomodulin; LRR prote 98.7 1.1E-09 3.9E-14 94.0 -0.4 117 22-138 29-164 (185)
325 3aln_A Dual specificity mitoge 98.7 2.6E-08 9.1E-13 93.9 8.9 78 403-482 21-100 (327)
326 2qr7_A Ribosomal protein S6 ki 98.7 9.7E-09 3.3E-13 97.5 5.7 74 402-482 20-95 (342)
327 2buj_A Serine/threonine-protei 98.7 1.9E-08 6.6E-13 94.3 7.7 77 403-482 28-109 (317)
328 1cm8_A Phosphorylated MAP kina 98.7 1.1E-08 3.7E-13 98.2 5.9 79 403-482 24-109 (367)
329 4exu_A Mitogen-activated prote 98.7 1.6E-08 5.5E-13 97.2 7.1 75 403-478 41-116 (371)
330 3lxl_A Tyrosine-protein kinase 98.7 3.8E-08 1.3E-12 92.8 9.5 76 404-482 23-105 (327)
331 1mqb_A Ephrin type-A receptor 98.7 1.7E-08 5.8E-13 95.5 7.0 77 404-482 44-125 (333)
332 2vwi_A Serine/threonine-protei 98.7 6.3E-09 2.2E-13 96.9 3.9 80 401-482 12-92 (303)
333 1mp8_A Focal adhesion kinase 1 98.7 2.8E-08 9.7E-13 91.5 8.2 78 402-482 13-94 (281)
334 2i6l_A Mitogen-activated prote 98.7 2.5E-08 8.5E-13 93.6 7.9 67 404-473 11-78 (320)
335 2izr_A Casein kinase I isoform 98.7 1.2E-08 4E-13 96.5 5.6 74 404-482 9-84 (330)
336 3e3p_A Protein kinase, putativ 98.7 1.8E-08 6E-13 96.5 6.9 76 397-476 16-92 (360)
337 2b9h_A MAP kinase FUS3, mitoge 98.7 2.1E-08 7.4E-13 95.6 7.3 78 403-482 10-93 (353)
338 3rgf_A Cyclin-dependent kinase 98.7 2.8E-08 9.6E-13 96.7 8.2 74 404-482 20-99 (405)
339 2fst_X Mitogen-activated prote 98.7 1.6E-08 5.4E-13 97.0 6.3 79 403-482 28-113 (367)
340 3byv_A Rhoptry kinase; malaria 98.7 7.9E-09 2.7E-13 99.6 4.2 74 402-475 71-155 (377)
341 3nsz_A CK II alpha, casein kin 98.7 3.2E-08 1.1E-12 93.4 8.3 73 404-482 36-112 (330)
342 3gxj_A TGF-beta receptor type- 98.7 2.4E-08 8.3E-13 92.9 7.3 72 404-482 3-80 (303)
343 1fvr_A Tyrosine-protein kinase 98.7 3.1E-08 1.1E-12 93.4 8.1 77 404-482 25-105 (327)
344 3coi_A Mitogen-activated prote 98.7 2.2E-08 7.5E-13 95.6 7.1 73 404-477 24-97 (353)
345 3poz_A Epidermal growth factor 98.7 2.7E-08 9.2E-13 93.9 7.5 75 404-480 15-94 (327)
346 3qyz_A Mitogen-activated prote 98.7 2.5E-08 8.5E-13 95.6 7.3 79 402-482 25-109 (364)
347 2xir_A Vascular endothelial gr 98.7 1.7E-08 5.7E-13 94.7 5.9 86 395-482 18-111 (316)
348 1byg_A CSK, protein (C-termina 98.7 2.6E-08 8.9E-13 91.6 7.1 74 403-482 20-94 (278)
349 1xbb_A Tyrosine-protein kinase 98.7 4.4E-08 1.5E-12 90.7 8.6 78 403-482 15-96 (291)
350 2w1i_A JAK2; chromosomal rearr 98.7 3.8E-08 1.3E-12 92.8 8.3 77 403-482 40-123 (326)
351 1io0_A Tropomodulin; LRR prote 98.7 2.1E-09 7.1E-14 92.3 -0.4 112 44-155 27-164 (185)
352 2eva_A TAK1 kinase - TAB1 chim 98.7 1.3E-08 4.5E-13 95.1 5.0 71 404-482 8-78 (307)
353 3pls_A Macrophage-stimulating 98.7 3.4E-08 1.2E-12 91.7 7.8 76 405-482 22-102 (298)
354 2ozo_A Tyrosine-protein kinase 98.7 2.5E-08 8.6E-13 102.2 7.5 69 411-482 343-414 (613)
355 3lm5_A Serine/threonine-protei 98.7 4.9E-08 1.7E-12 92.0 8.8 88 394-482 18-108 (327)
356 1u46_A ACK-1, activated CDC42 98.7 1.7E-08 5.7E-13 93.5 5.4 78 403-481 17-98 (291)
357 2dyl_A Dual specificity mitoge 98.7 5.6E-08 1.9E-12 91.1 9.0 79 403-482 24-103 (318)
358 1vzo_A Ribosomal protein S6 ki 98.6 1.6E-08 5.3E-13 96.7 4.9 80 403-482 53-138 (355)
359 3og7_A AKAP9-BRAF fusion prote 98.6 5.1E-08 1.8E-12 90.2 8.1 76 403-482 23-98 (289)
360 2vuw_A Serine/threonine-protei 98.6 3.1E-08 1E-12 93.8 6.6 70 403-473 19-102 (336)
361 3brb_A Proto-oncogene tyrosine 98.6 3E-08 1E-12 92.8 6.5 75 401-476 31-109 (313)
362 2a19_B Interferon-induced, dou 98.6 3.7E-08 1.3E-12 90.8 7.0 66 402-474 9-75 (284)
363 1j1b_A Glycogen synthase kinas 98.6 2.3E-08 7.9E-13 97.8 5.6 64 404-474 54-118 (420)
364 2pzi_A Probable serine/threoni 98.6 2.9E-08 9.9E-13 103.3 6.6 77 404-482 80-163 (681)
365 3g33_A Cell division protein k 98.6 3.5E-08 1.2E-12 92.2 6.5 81 402-482 7-98 (308)
366 4fl3_A Tyrosine-protein kinase 98.6 5.5E-08 1.9E-12 100.0 8.5 71 410-482 375-448 (635)
367 3q4u_A Activin receptor type-1 98.6 6.9E-08 2.4E-12 89.8 8.3 73 403-482 7-85 (301)
368 1b6c_B TGF-B superfamily recep 98.6 1.5E-07 5E-12 89.3 9.9 76 400-482 38-119 (342)
369 3f66_A Hepatocyte growth facto 98.6 5.8E-08 2E-12 90.2 7.0 77 404-482 25-106 (298)
370 3lb7_A RAF proto-oncogene seri 98.6 8.6E-08 3E-12 89.5 8.2 76 403-482 35-110 (307)
371 2iwi_A Serine/threonine-protei 98.6 2E-08 6.9E-13 94.0 3.8 83 400-482 27-117 (312)
372 3c1x_A Hepatocyte growth facto 98.6 2.9E-08 1E-12 95.3 4.8 76 405-482 90-170 (373)
373 3lzb_A Epidermal growth factor 98.6 9.3E-08 3.2E-12 90.1 8.2 75 404-480 15-94 (327)
374 3cc6_A Protein tyrosine kinase 98.6 5.7E-08 2E-12 89.4 6.5 78 402-482 10-91 (281)
375 1blx_A Cyclin-dependent kinase 98.6 4.5E-08 1.5E-12 92.2 5.8 81 401-482 8-98 (326)
376 3ll6_A Cyclin G-associated kin 98.6 7E-08 2.4E-12 91.3 6.9 68 403-473 27-96 (337)
377 4e7w_A Glycogen synthase kinas 98.6 8.9E-08 3E-12 92.8 7.7 72 404-482 40-117 (394)
378 3e7e_A HBUB1, BUB1A, mitotic c 98.6 6.8E-08 2.3E-12 92.6 6.9 75 402-482 63-146 (365)
379 3pfq_A PKC-B, PKC-beta, protei 98.6 5E-08 1.7E-12 101.0 6.2 81 402-482 339-421 (674)
380 3mdy_A Bone morphogenetic prot 98.6 1.9E-07 6.5E-12 88.3 9.7 76 400-482 33-114 (337)
381 3kvw_A DYRK2, dual specificity 98.6 9.6E-08 3.3E-12 93.6 7.8 76 403-482 96-178 (429)
382 2rio_A Serine/threonine-protei 98.5 7.3E-08 2.5E-12 94.6 6.8 72 405-482 16-88 (434)
383 3p23_A Serine/threonine-protei 98.5 9.7E-08 3.3E-12 93.5 7.0 74 403-482 23-97 (432)
384 1csn_A Casein kinase-1; phosph 98.5 1.2E-07 4.3E-12 87.9 7.3 75 403-482 9-85 (298)
385 3kex_A Receptor tyrosine-prote 98.5 5.3E-08 1.8E-12 91.7 4.6 75 404-481 13-92 (325)
386 1wak_A Serine/threonine-protei 98.5 5.7E-08 2E-12 94.2 4.8 76 403-482 36-124 (397)
387 3m2w_A MAP kinase-activated pr 98.5 2.6E-07 9E-12 85.8 8.7 71 404-482 17-94 (299)
388 3a99_A Proto-oncogene serine/t 98.5 5.1E-08 1.8E-12 91.6 3.5 82 401-482 40-127 (320)
389 2v62_A Serine/threonine-protei 98.5 1.3E-07 4.5E-12 89.8 6.3 79 404-482 37-131 (345)
390 1nxk_A MAP kinase-activated pr 98.5 2.8E-07 9.7E-12 89.3 8.7 71 404-482 61-138 (400)
391 2j0j_A Focal adhesion kinase 1 98.5 1.5E-07 5.2E-12 97.1 7.0 78 402-482 388-469 (656)
392 2y4i_B KSR2, HKSR2, kinase sup 98.5 4.5E-08 1.6E-12 91.9 2.8 83 397-482 26-108 (319)
393 3op5_A Serine/threonine-protei 98.4 3E-07 1E-11 88.0 7.5 81 402-482 33-131 (364)
394 3rw6_A Nuclear RNA export fact 98.4 1.5E-08 5.1E-13 91.3 -1.8 64 51-116 168-235 (267)
395 2jii_A Serine/threonine-protei 98.4 9.7E-08 3.3E-12 91.0 3.7 71 404-482 42-137 (352)
396 3q60_A ROP5B; pseudokinase, tr 98.4 3.8E-07 1.3E-11 87.6 7.8 66 403-469 61-130 (371)
397 1z57_A Dual specificity protei 98.4 2.2E-07 7.6E-12 87.8 5.6 75 404-482 14-96 (339)
398 1q8y_A SR protein kinase; tran 98.4 1.9E-07 6.4E-12 89.7 4.9 75 404-482 19-109 (373)
399 3rw6_A Nuclear RNA export fact 98.4 1.6E-07 5.6E-12 84.6 3.8 80 26-107 167-257 (267)
400 3e4g_A ATP synthase subunit S, 98.3 6E-08 2.1E-12 81.0 0.3 92 21-112 53-150 (176)
401 3uzp_A CKI-delta, CKID, casein 98.3 6.8E-07 2.3E-11 82.7 7.4 75 403-482 8-84 (296)
402 3qa8_A MGC80376 protein; kinas 98.3 5.5E-08 1.9E-12 99.2 -0.4 78 403-482 13-97 (676)
403 2vx3_A Dual specificity tyrosi 98.3 5.5E-07 1.9E-11 86.8 6.3 77 402-482 52-135 (382)
404 3e4g_A ATP synthase subunit S, 98.3 1.1E-07 3.9E-12 79.4 1.1 92 45-136 53-150 (176)
405 3g2f_A Bone morphogenetic prot 98.3 8E-07 2.7E-11 84.0 7.0 73 403-482 12-91 (336)
406 3fhr_A MAP kinase-activated pr 98.3 1.6E-06 5.3E-11 82.0 8.4 73 403-482 27-105 (336)
407 4hgt_A Casein kinase I isoform 98.3 7.9E-07 2.7E-11 82.3 5.9 76 402-482 7-84 (296)
408 2eu9_A Dual specificity protei 98.3 7.5E-07 2.6E-11 84.8 5.6 76 403-482 18-101 (355)
409 3en9_A Glycoprotease, O-sialog 98.2 2.7E-06 9.1E-11 85.6 9.4 75 407-482 339-418 (540)
410 3sv0_A Casein kinase I-like; t 98.2 1.9E-06 6.4E-11 85.4 7.6 75 403-482 6-82 (483)
411 1zar_A RIO2 kinase; serine kin 98.1 2.4E-06 8.3E-11 78.4 6.0 82 397-482 83-179 (282)
412 3dzo_A Rhoptry kinase domain; 97.7 2.5E-05 8.7E-10 75.9 4.9 61 402-462 76-137 (413)
413 1pgv_A TMD-1, tropomodulin TMD 97.6 1.1E-05 3.7E-10 68.7 0.8 114 25-138 37-170 (197)
414 1pgv_A TMD-1, tropomodulin TMD 97.6 1.3E-05 4.3E-10 68.3 0.6 111 45-155 33-170 (197)
415 1zth_A RIO1 serine protein kin 97.5 0.00015 5.1E-09 65.4 7.4 61 405-465 48-132 (258)
416 4azs_A Methyltransferase WBDD; 97.3 0.00018 6.2E-09 72.7 5.9 71 412-482 242-321 (569)
417 4gyi_A RIO2 kinase; protein ki 96.9 0.00017 5.8E-09 68.4 0.8 39 400-438 91-129 (397)
418 3rfe_A Platelet glycoprotein I 96.7 0.0026 8.8E-08 50.3 6.2 55 9-65 12-67 (130)
419 3rfe_A Platelet glycoprotein I 96.6 0.0052 1.8E-07 48.6 6.8 56 218-275 12-68 (130)
420 3tm0_A Aminoglycoside 3'-phosp 95.6 0.034 1.2E-06 49.8 8.2 80 399-482 9-89 (263)
421 1nd4_A Aminoglycoside 3'-phosp 94.1 0.061 2.1E-06 47.8 5.6 75 402-482 18-94 (264)
422 3d1u_A Putative fructosamine-3 93.8 0.095 3.3E-06 47.6 6.3 62 407-471 18-82 (288)
423 2ks1_B Epidermal growth factor 93.6 0.2 6.7E-06 30.4 5.2 23 343-365 15-37 (44)
424 3cxl_A N-chimerin; SH2, RHO-GA 91.6 0.019 6.5E-07 56.2 -1.8 62 409-474 147-215 (463)
425 2l2t_A Receptor tyrosine-prote 91.4 0.37 1.3E-05 29.1 4.4 18 349-366 20-37 (44)
426 2jwa_A Receptor tyrosine-prote 87.7 0.83 2.9E-05 27.6 3.9 8 342-349 14-21 (44)
427 3f7w_A Putative fructosamine-3 82.5 2.1 7.3E-05 38.4 6.3 54 405-461 16-69 (288)
428 3dxp_A Putative acyl-COA dehyd 81.0 1.2 4.2E-05 41.5 4.2 71 409-482 43-120 (359)
429 2olc_A MTR kinase, methylthior 76.0 2.3 7.9E-05 40.3 4.4 72 409-482 35-114 (397)
430 2k1k_A Ephrin type-A receptor 74.1 4.2 0.00014 23.7 3.5 10 342-351 13-22 (38)
431 2ks1_B Epidermal growth factor 69.5 7.7 0.00026 23.4 4.0 33 336-368 11-43 (44)
432 3jr1_A Putative fructosamine-3 66.0 12 0.00042 33.9 6.7 67 409-482 41-110 (312)
433 2lz0_A Uncharacterized protein 63.1 19 0.00067 26.2 6.1 42 44-86 11-52 (100)
434 2l2t_A Receptor tyrosine-prote 61.9 6.1 0.00021 23.8 2.5 31 339-369 13-43 (44)
435 2lz0_A Uncharacterized protein 60.6 12 0.0004 27.4 4.5 48 15-63 6-53 (100)
436 4gkh_A Aminoglycoside 3'-phosp 58.0 38 0.0013 29.4 8.5 65 412-482 32-99 (272)
437 3r70_A Aminoglycoside phosphot 51.3 16 0.00055 33.1 4.9 49 405-462 38-86 (320)
438 3ovc_A Hygromycin-B 4-O-kinase 51.0 47 0.0016 30.7 8.1 66 408-482 45-113 (362)
439 2l9u_A Receptor tyrosine-prote 43.5 33 0.0011 19.1 3.3 21 346-366 13-33 (40)
440 3tdw_A Gentamicin resistance p 27.1 85 0.0029 28.0 5.5 64 410-482 25-92 (306)
441 3ats_A Putative uncharacterize 26.1 20 0.00069 33.0 1.1 67 409-475 25-102 (357)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-43 Score=375.27 Aligned_cols=321 Identities=38% Similarity=0.626 Sum_probs=258.3
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCcc-ccCCCCCCeeecccCcceeccCccc----------
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPST-LGHLTQLTTLAIASNHINVSIPLEI---------- 73 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~---------- 73 (482)
++|++|+|++|.+++.+|..|+.+++|++|+|++|++++.+|.. +.++++|++|++++|.+++.+|..+
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 66666666666666666666666666666666666666555544 5666666666666665554444443
Q ss_pred ---------------cC--CCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEccccc
Q 036034 74 ---------------GN--LNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNL 136 (482)
Q Consensus 74 ---------------~~--l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 136 (482)
.. +++|++|++++|.+++.+|..++++++|++|++++|++++..|..++++++|++|++++|.
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 33 5567777777777776777778888888888888888887888888888888888888887
Q ss_pred Ccc-------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCcc
Q 036034 137 INA-------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLE 209 (482)
Q Consensus 137 i~~-------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 209 (482)
+.+ .+++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|.+++.+++|+.|++++|.+++.+|..
T Consensus 454 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 533 (768)
T 3rgz_A 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGG
T ss_pred ccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHH
Confidence 763 2568899999999999888988999999999999999999889999999999999999999999899999
Q ss_pred CcCCCCCCeeeccCCcccCCCCccC-------------------------------------------------------
Q 036034 210 IGNLKRVEAVKLYDNKLDGPIPPEL------------------------------------------------------- 234 (482)
Q Consensus 210 ~~~l~~L~~L~l~~n~l~~~~~~~~------------------------------------------------------- 234 (482)
++.+++|+.|++++|++.+.+|..+
T Consensus 534 l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 613 (768)
T 3rgz_A 534 LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613 (768)
T ss_dssp GGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCS
T ss_pred HcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence 9999999999999998887766543
Q ss_pred ---------------cCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccc
Q 036034 235 ---------------MNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 235 ---------------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
..+++|+.|++++|+++|.+|..++.++.|+.|++++|.+++.+|..++.+++|+.||+++|+++
T Consensus 614 ~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~ 693 (768)
T 3rgz_A 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693 (768)
T ss_dssp CTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred ccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCccc
Confidence 23467889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCC---CCCeEeccCCcCcccCCC
Q 036034 300 GSIPKSVR---KVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 300 ~~~p~~~~---~l~~l~~~~n~~~~~~~~ 325 (482)
|.+|..+. .+..+++++|++.|.+|.
T Consensus 694 g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp ECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred CcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99998754 577899999999999886
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3e-42 Score=365.10 Aligned_cols=320 Identities=38% Similarity=0.534 Sum_probs=279.8
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCC-CCCEEeCcCCcccccCCccccC--CCCCCeeecccCcceeccCccccCCCC
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLS-KLENLHLSSNSLVGNIPSTLGH--LTQLTTLAIASNHINVSIPLEIGNLNF 78 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~ 78 (482)
+++++|++|++++|.+++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|++++|.+++.+|..++++++
T Consensus 340 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~ 419 (768)
T 3rgz_A 340 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419 (768)
T ss_dssp TTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTT
T ss_pred hcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCC
Confidence 3456666666666666656666666555 6666666666666666666655 678888999999998889999999999
Q ss_pred CCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEccc
Q 036034 79 LQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHY 151 (482)
Q Consensus 79 L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~ 151 (482)
|++|++++|.+++.+|..++.+++|++|++++|.+.+.+|..+..+++|++|++++|.+.+ .+++|+.|++++
T Consensus 420 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 499 (768)
T 3rgz_A 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499 (768)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred CCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccC
Confidence 9999999999999999999999999999999999999999999999999999999999874 367899999999
Q ss_pred CeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccC---------------------
Q 036034 152 NNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEI--------------------- 210 (482)
Q Consensus 152 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--------------------- 210 (482)
|.+++.+|..++.+++|+.|++++|.+.+.+|..++.+++|+.|++++|.++|.+|..+
T Consensus 500 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~ 579 (768)
T 3rgz_A 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 579 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEE
T ss_pred CccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999987776543
Q ss_pred -------------------------------------------------cCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 211 -------------------------------------------------GNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 211 -------------------------------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
+.+++|+.|++++|+++|.+|..++.++.|+
T Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 659 (768)
T 3rgz_A 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 659 (768)
T ss_dssp CCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCC
T ss_pred cccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCC
Confidence 3357789999999999999999999999999
Q ss_pred EEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCcc--CCCCCeEeccCCc-
Q 036034 242 ELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKS--VRKVPHLDVLGNN- 318 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~--~~~l~~l~~~~n~- 318 (482)
.|+|++|.++|.+|..++.+++|+.||+++|+++|.+|..+..++.|+.+++++|+++|.+|.. +..+....+.+|+
T Consensus 660 ~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~ 739 (768)
T 3rgz_A 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 739 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTE
T ss_pred EEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCch
Confidence 9999999999999999999999999999999999999999999999999999999999999975 4456667777886
Q ss_pred Ccc
Q 036034 319 LEG 321 (482)
Q Consensus 319 ~~~ 321 (482)
++|
T Consensus 740 Lcg 742 (768)
T 3rgz_A 740 LCG 742 (768)
T ss_dssp EES
T ss_pred hcC
Confidence 444
No 3
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.4e-39 Score=323.29 Aligned_cols=321 Identities=20% Similarity=0.210 Sum_probs=271.3
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccC-CccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNI-PSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|++++|.+++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67999999999999888999999999999999999987544 67799999999999999999988899999999999999
Q ss_pred ccCCcccccCCcc--CcCCCCCCEEeCcCCcccccCCcc-ccCCCCCCEEEcccccCccc---------ccCcCEEEccc
Q 036034 84 LSGNEIRGSIPST--FGHLKRLKSLDLSQNKLVGPIPSS-LGHLTQLTTLNMRSNLINAS---------LVNLTSLSLHY 151 (482)
Q Consensus 84 L~~n~~~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~l~~n~i~~~---------~~~L~~L~l~~ 151 (482)
|++|.+++..+.. +..+++|++|++++|++.+..|.. +.++++|++|++++|.+... ..+++.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755554 899999999999999999877776 89999999999999988642 14567777777
Q ss_pred CeecccCCcc--------CcCCCCCCEEEccCCccccCCCcCC-------------------------------------
Q 036034 152 NNLTGPIPST--------LGHLNRIRILDLSENKLVGPIPSSV------------------------------------- 186 (482)
Q Consensus 152 n~~~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~~~~~------------------------------------- 186 (482)
|.+.+..+.. +..+++|+.|++++|.+.+..|..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 7766543322 2244667777777776654322211
Q ss_pred c--CCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCC
Q 036034 187 G--HLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQEL 264 (482)
Q Consensus 187 ~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L 264 (482)
. ..++|+.|++++|.+.+..|..++.+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 1 12689999999999998889999999999999999999998888899999999999999999998888889999999
Q ss_pred CEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCcc---CCCCCeEeccCCcCcccCCC
Q 036034 265 YYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKS---VRKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 265 ~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~---~~~l~~l~~~~n~~~~~~~~ 325 (482)
+.|++++|.+.+..+..+..+++|++|++++|++++..+.. +.+++.+++++|++.+.+|.
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999999999888889999999999999999999866644 45688999999999887664
No 4
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.8e-39 Score=318.91 Aligned_cols=303 Identities=23% Similarity=0.255 Sum_probs=264.8
Q ss_pred CCCCCCCCEEeccCCccccCC-CcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCcc--ccCCC
Q 036034 1 MGRLRNLVHLDLSDNYLWGYI-PPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLE--IGNLN 77 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~l~ 77 (482)
++++++|++|++++|.+.+.+ +..|..+++|++|+|++|.+++..|..|+++++|++|++++|.+++..+.. +..++
T Consensus 50 ~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~ 129 (455)
T 3v47_A 50 FSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLT 129 (455)
T ss_dssp TSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCT
T ss_pred hccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcc
Confidence 467999999999999987444 677999999999999999999899999999999999999999998755544 89999
Q ss_pred CCCEEEccCCcccccCCcc-CcCCCCCCEEeCcCCcccccCCccccCC--CCCCEEEcccccCccc--------------
Q 036034 78 FLQVLDLSGNEIRGSIPST-FGHLKRLKSLDLSQNKLVGPIPSSLGHL--TQLTTLNMRSNLINAS-------------- 140 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~l~~n~i~~~-------------- 140 (482)
+|++|+|++|.+++..|.. +..+++|++|++++|++.+..|..+..+ .+|+.|++++|.+...
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~ 209 (455)
T 3v47_A 130 SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPF 209 (455)
T ss_dssp TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTT
T ss_pred cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccccc
Confidence 9999999999999877776 8999999999999999998888887766 5677777777766531
Q ss_pred -ccCcCEEEcccCeecccCCccCc---------------------------------------CCCCCCEEEccCCcccc
Q 036034 141 -LVNLTSLSLHYNNLTGPIPSTLG---------------------------------------HLNRIRILDLSENKLVG 180 (482)
Q Consensus 141 -~~~L~~L~l~~n~~~~~~~~~~~---------------------------------------~l~~L~~L~l~~n~l~~ 180 (482)
+++|+.|++++|.+++..|..+. ..++|+.|++++|.+.+
T Consensus 210 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp TTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred ccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc
Confidence 24577777777766543332221 12689999999999998
Q ss_pred CCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccC
Q 036034 181 PIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGK 260 (482)
Q Consensus 181 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 260 (482)
..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..|..+..
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 88999999999999999999999888999999999999999999999888889999999999999999999888999999
Q ss_pred ccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 261 LQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 261 ~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
+++|++|++++|++.+..+..+..+++|+.+++++|++++..|
T Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999999999998777778999999999999999999887
No 5
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-37 Score=319.45 Aligned_cols=319 Identities=21% Similarity=0.242 Sum_probs=214.3
Q ss_pred CCCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCC
Q 036034 1 MGRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQ 80 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 80 (482)
+.++++|++|++++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|++++|.+++..+..++++++|+
T Consensus 52 ~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 131 (606)
T 3vq2_A 52 FSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLK 131 (606)
T ss_dssp TTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCC
T ss_pred ccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCC
Confidence 35677777777777777766677777777777777777777766677777777777777777777765556677777777
Q ss_pred EEEccCCcccc-cCCccCcCCCCCCEEeCcCCcccccCCccccCC-----------------------------------
Q 036034 81 VLDLSGNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHL----------------------------------- 124 (482)
Q Consensus 81 ~L~L~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l----------------------------------- 124 (482)
+|++++|.+.+ .+|..++++++|++|++++|++++..|..++.+
T Consensus 132 ~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L 211 (606)
T 3vq2_A 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTL 211 (606)
T ss_dssp EEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred EEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeec
Confidence 77777777764 457777777777777777777665433322111
Q ss_pred --------------------------------------------------------------------------------
Q 036034 125 -------------------------------------------------------------------------------- 124 (482)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (482)
T Consensus 212 ~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~ 291 (606)
T 3vq2_A 212 RGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMS 291 (606)
T ss_dssp ESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEE
T ss_pred cCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEE
Confidence
Q ss_pred ---------------CCCCEEEcccccCc--------------------------ccccCcCEEEcccCeeccc--CCcc
Q 036034 125 ---------------TQLTTLNMRSNLIN--------------------------ASLVNLTSLSLHYNNLTGP--IPST 161 (482)
Q Consensus 125 ---------------~~L~~L~l~~n~i~--------------------------~~~~~L~~L~l~~n~~~~~--~~~~ 161 (482)
++|++|++.+|.+. ..+++|+.|++++|.+++. .+..
T Consensus 292 l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 371 (606)
T 3vq2_A 292 LAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYS 371 (606)
T ss_dssp EESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHH
T ss_pred ecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhh
Confidence 12222222222211 0134566666666666644 3666
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccC-ccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIP-LEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
+..+++|+.|++++|.+.+ +|..+..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+..|..+..+++|
T Consensus 372 ~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 450 (606)
T 3vq2_A 372 DLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 450 (606)
T ss_dssp HHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred hccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCC
Confidence 6777777777777777763 55667777777777777777776555 566677777777777777776666667777777
Q ss_pred CEEEcCCCcCcc-cCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCC---CCCeEeccC
Q 036034 241 MELELGNNLLRG-SIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVR---KVPHLDVLG 316 (482)
Q Consensus 241 ~~L~l~~n~l~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~---~l~~l~~~~ 316 (482)
++|++++|.+++ .+|..++.+++|+.|++++|.+.+..+..+..+++|+.|++++|++++..|..+. +++.+++++
T Consensus 451 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 530 (606)
T 3vq2_A 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSF 530 (606)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCC
Confidence 777777777765 3566667777777777777777766666677777777777777777766665543 356677777
Q ss_pred CcCc
Q 036034 317 NNLE 320 (482)
Q Consensus 317 n~~~ 320 (482)
|.+.
T Consensus 531 N~l~ 534 (606)
T 3vq2_A 531 NRIE 534 (606)
T ss_dssp SCCC
T ss_pred CcCc
Confidence 7665
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.7e-39 Score=330.75 Aligned_cols=317 Identities=20% Similarity=0.311 Sum_probs=248.1
Q ss_pred CCCCCCCCEEeccCCccccC-----------------CCcccC--CCCCCCEEeCcCCcccccCCccccCCCCCCeeecc
Q 036034 1 MGRLRNLVHLDLSDNYLWGY-----------------IPPTLG--RLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIA 61 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~-----------------~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 61 (482)
++++++|++|+|++|.+++. +|+.++ .+++|++|+|++|++.+.+|..|+++++|++|+++
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 35788999999999999875 888888 99999999999999999999999999999999999
Q ss_pred cCc-cee-ccCccccCC------CCCCEEEccCCcccccCCc--cCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEE
Q 036034 62 SNH-INV-SIPLEIGNL------NFLQVLDLSGNEIRGSIPS--TFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLN 131 (482)
Q Consensus 62 ~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~~~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 131 (482)
+|+ +++ .+|..++++ ++|++|++++|.++ .+|. .++++++|++|++++|++.+.+| .+..+++|++|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 887 788887776 88999999999988 7887 88899999999999999988888 888888888888
Q ss_pred cccccCcc------cccC-cCEEEcccCeecccCCccCcCCC--CCCEEEccCCccccCCCcCCc-------CCCCCCEE
Q 036034 132 MRSNLINA------SLVN-LTSLSLHYNNLTGPIPSTLGHLN--RIRILDLSENKLVGPIPSSVG-------HLTQLNTL 195 (482)
Q Consensus 132 l~~n~i~~------~~~~-L~~L~l~~n~~~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L 195 (482)
+++|.+.. .+++ |+.|++++|.++ .+|..+..+. +|+.|++++|.+.+..|..+. .+++|+.|
T Consensus 360 L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L 438 (636)
T 4eco_A 360 LAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSI 438 (636)
T ss_dssp CCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEE
T ss_pred CCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEE
Confidence 88887763 2456 888888888888 6777766654 788888888888877777777 66788888
Q ss_pred eccCCccccccCcc-CcCCCCCCeeeccCCcccCCCCccCcC-C-------CCCCEEEcCCCcCcccCCcccc--CccCC
Q 036034 196 NMYSNQINGSIPLE-IGNLKRVEAVKLYDNKLDGPIPPELMN-C-------SKLMELELGNNLLRGSIPSEIG--KLQEL 264 (482)
Q Consensus 196 ~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~-~-------~~L~~L~l~~n~l~~~~~~~~~--~~~~L 264 (482)
++++|.++ .+|.. +..+++|+.|++++|.++ .+|..... . ++|+.|++++|.++ .+|..+. .+++|
T Consensus 439 ~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L 515 (636)
T 4eco_A 439 NLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYL 515 (636)
T ss_dssp ECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTC
T ss_pred ECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCc
Confidence 88888887 34443 445778888888888777 44443322 2 27788888888777 6676665 77788
Q ss_pred CEEeccCCcCccccchhhcCCCCCCEEEC------CCCccccccCccC---CCCCeEeccCCcCcccCCC
Q 036034 265 YYLDLSHNFINGKILSELGAIPSIDTVDL------SMNNLSGSIPKSV---RKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 265 ~~L~l~~n~l~~~~~~~~~~~~~L~~l~l------~~n~l~~~~p~~~---~~l~~l~~~~n~~~~~~~~ 325 (482)
+.|++++|++.+ +|..+..+++|+.|++ ++|++.+.+|..+ .+++.+++++|.+ +..|.
T Consensus 516 ~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 516 VGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp CEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred CEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCH
Confidence 888888888776 6677777788888877 4566677777654 4466777777777 44444
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-37 Score=320.67 Aligned_cols=319 Identities=21% Similarity=0.189 Sum_probs=201.2
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
++++|++++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 46666666666666556666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcC-------------
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLT------------- 145 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~------------- 145 (482)
+|.+++..+..++.+++|++|++++|.+.+..+..+..+++|++|++++|.+.. .+++|+
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 666665545566666666666666666665333333346666666666665542 133333
Q ss_pred ----------------------------------------------------------------EEEcccCeecccCCcc
Q 036034 146 ----------------------------------------------------------------SLSLHYNNLTGPIPST 161 (482)
Q Consensus 146 ----------------------------------------------------------------~L~l~~n~~~~~~~~~ 161 (482)
.|++++|.+++..+..
T Consensus 194 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~ 273 (606)
T 3t6q_A 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273 (606)
T ss_dssp ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTT
T ss_pred cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHH
Confidence 4444444444444444
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCc-cCcCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPP-ELMNCSKL 240 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~~~L 240 (482)
+..+++|+.|++++|.++ .+|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+.++. .+..+++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 666667777777777766 5666666677777777777777665566666677777777777766655443 36666777
Q ss_pred CEEEcCCCcCcccC--CccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCcc----CCCCCeEec
Q 036034 241 MELELGNNLLRGSI--PSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKS----VRKVPHLDV 314 (482)
Q Consensus 241 ~~L~l~~n~l~~~~--~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~----~~~l~~l~~ 314 (482)
++|++++|.+++.. +..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+.+..|.. +.+++.+++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 77777777666544 556666777777777777766666666666677777777777766554432 344666677
Q ss_pred cCCcCcccCCC
Q 036034 315 LGNNLEGEIPS 325 (482)
Q Consensus 315 ~~n~~~~~~~~ 325 (482)
++|.+.+..|.
T Consensus 433 ~~n~l~~~~~~ 443 (606)
T 3t6q_A 433 SHSLLDISSEQ 443 (606)
T ss_dssp TTCCCBTTCTT
T ss_pred CCCccCCcCHH
Confidence 77666554443
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.3e-38 Score=327.98 Aligned_cols=312 Identities=18% Similarity=0.320 Sum_probs=280.6
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCc-ccc-cCCccccCC------CCCCeeecccCcceeccCc--c
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNS-LVG-NIPSTLGHL------TQLTTLAIASNHINVSIPL--E 72 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~l~~n~l~~~~~~--~ 72 (482)
++++|++|+|++|.+.+.+|+.|+++++|++|+|++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 89999999999999999999999999999999999998 998 899888876 99999999999999 7898 8
Q ss_pred ccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCC-CCEEEcccccCccc--------ccC
Q 036034 73 IGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQ-LTTLNMRSNLINAS--------LVN 143 (482)
Q Consensus 73 ~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~l~~n~i~~~--------~~~ 143 (482)
++++++|++|++++|.+++.+| .++.+++|++|++++|++. .+|..+..+++ |++|++++|.+... +++
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~ 403 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSV 403 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSC
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCc
Confidence 9999999999999999998999 9999999999999999999 78999999999 99999999998732 237
Q ss_pred cCEEEcccCeecccCCccCc-------CCCCCCEEEccCCccccCCCc-CCcCCCCCCEEeccCCccccccCccCcC---
Q 036034 144 LTSLSLHYNNLTGPIPSTLG-------HLNRIRILDLSENKLVGPIPS-SVGHLTQLNTLNMYSNQINGSIPLEIGN--- 212 (482)
Q Consensus 144 L~~L~l~~n~~~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~--- 212 (482)
|+.|++++|.+++..|..+. .+.+|+.|++++|.++ .+|. .+..+++|+.|++++|.++ .+|..+..
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~ 481 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDEN 481 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETT
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcccc
Confidence 99999999999999998888 7889999999999998 4554 4566899999999999999 56655433
Q ss_pred -----CCCCCeeeccCCcccCCCCccCc--CCCCCCEEEcCCCcCcccCCccccCccCCCEEec------cCCcCccccc
Q 036034 213 -----LKRVEAVKLYDNKLDGPIPPELM--NCSKLMELELGNNLLRGSIPSEIGKLQELYYLDL------SHNFINGKIL 279 (482)
Q Consensus 213 -----l~~L~~L~l~~n~l~~~~~~~~~--~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l------~~n~l~~~~~ 279 (482)
+++|+.|++++|.++ .+|..+. .+++|+.|++++|.+++ +|..+..+++|+.|++ ++|++.+.+|
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p 559 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCC
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccCh
Confidence 239999999999999 6888876 89999999999999997 8999999999999999 5678888999
Q ss_pred hhhcCCCCCCEEECCCCccccccCccC-CCCCeEeccCCcCccc
Q 036034 280 SELGAIPSIDTVDLSMNNLSGSIPKSV-RKVPHLDVLGNNLEGE 322 (482)
Q Consensus 280 ~~~~~~~~L~~l~l~~n~l~~~~p~~~-~~l~~l~~~~n~~~~~ 322 (482)
..+..+++|+.|++++|++ +.+|..+ ..+..+++++|++...
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred HHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 9999999999999999999 5666644 5699999999988653
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.8e-37 Score=317.82 Aligned_cols=320 Identities=20% Similarity=0.182 Sum_probs=275.6
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|.+++..|..|+++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 67999999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccCcccc-------c--------------
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINASL-------V-------------- 142 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~~~-------~-------------- 142 (482)
++|.+++..+..++++++|++|++++|.+.+ .+|..++++++|++|++++|.+.... .
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999997777899999999999999999986 57999999999999999999765321 0
Q ss_pred -------------CcCEEEcccCeec------------------------------------------------------
Q 036034 143 -------------NLTSLSLHYNNLT------------------------------------------------------ 155 (482)
Q Consensus 143 -------------~L~~L~l~~n~~~------------------------------------------------------ 155 (482)
+|+.|++++|.++
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence 2333344333221
Q ss_pred ------------------------------------------------ccCC--------------------ccCcCCCC
Q 036034 156 ------------------------------------------------GPIP--------------------STLGHLNR 167 (482)
Q Consensus 156 ------------------------------------------------~~~~--------------------~~~~~l~~ 167 (482)
+.+| ..+..+++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCC
Confidence 1111 02234567
Q ss_pred CCEEEccCCccccC--CCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCC-ccCcCCCCCCEEE
Q 036034 168 IRILDLSENKLVGP--IPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIP-PELMNCSKLMELE 244 (482)
Q Consensus 168 L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~ 244 (482)
|+.|++++|.+++. .+..+..+++|+.|++++|.+.+ +|..+..+++|+.|++++|.+.+..+ ..+..+++|+.|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 88888888888755 37788899999999999999885 67889999999999999999998877 6889999999999
Q ss_pred cCCCcCcccCCccccCccCCCEEeccCCcCccc-cchhhcCCCCCCEEECCCCccccccCccC---CCCCeEeccCCcCc
Q 036034 245 LGNNLLRGSIPSEIGKLQELYYLDLSHNFINGK-ILSELGAIPSIDTVDLSMNNLSGSIPKSV---RKVPHLDVLGNNLE 320 (482)
Q Consensus 245 l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~l~l~~n~l~~~~p~~~---~~l~~l~~~~n~~~ 320 (482)
+++|.+.+..|..+..+++|++|++++|.+.+. .+..+..+++|+.|++++|++++..|..+ .+++.+++++|.+.
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 999999998999999999999999999999974 67789999999999999999999888765 45889999999998
Q ss_pred ccCCC
Q 036034 321 GEIPS 325 (482)
Q Consensus 321 ~~~~~ 325 (482)
+..|.
T Consensus 511 ~~~~~ 515 (606)
T 3vq2_A 511 FLDSS 515 (606)
T ss_dssp CEEGG
T ss_pred CcCHH
Confidence 76554
No 10
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=309.56 Aligned_cols=297 Identities=22% Similarity=0.231 Sum_probs=174.0
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 34566666666665555556666666666666666666555666666666666666666665443444556666666666
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeeccc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTGP 157 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~~ 157 (482)
++|.+.+..+..+..+++|++|++++|.+.+..+..|.++++|++|++++|.+.. .+++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 6666665555566666666666666666665555566666666666666665542 244566666666666555
Q ss_pred CCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCC
Q 036034 158 IPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNC 237 (482)
Q Consensus 158 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 237 (482)
.+..+..+++|+.|++++|...+.++.......+|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 55555556666666666655554555444444456666666665553322345555666666666666555555555556
Q ss_pred CCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccc
Q 036034 238 SKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGS 301 (482)
Q Consensus 238 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~ 301 (482)
++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.+++++|++.+.
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 6666666666666555555555666666666666666554444555556666666666665543
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-36 Score=313.19 Aligned_cols=322 Identities=23% Similarity=0.230 Sum_probs=201.5
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCC-
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQ- 80 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~- 80 (482)
+++++|++|++++|.+++..+..++.+++|++|++++|.+++.....+..+++|++|++++|.+++..|..++.+++|+
T Consensus 102 ~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3t6q_A 102 SGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181 (606)
T ss_dssp SSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCS
T ss_pred cccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccce
Confidence 4566777777777776655455666666677777777666654333344466666666666666654455555555555
Q ss_pred -EEEccCCccc---------------------------------------------------------------------
Q 036034 81 -VLDLSGNEIR--------------------------------------------------------------------- 90 (482)
Q Consensus 81 -~L~L~~n~~~--------------------------------------------------------------------- 90 (482)
+|++++|.+.
T Consensus 182 l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l 261 (606)
T 3t6q_A 182 LSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINL 261 (606)
T ss_dssp EEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEEC
T ss_pred eEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEe
Confidence 4444444433
Q ss_pred ------ccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeeccc
Q 036034 91 ------GSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTGP 157 (482)
Q Consensus 91 ------~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~~ 157 (482)
+..+..|+.+++|++|++++|+++ .+|..+.++++|++|++++|.+.. .+++|+.|++++|.+.+.
T Consensus 262 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 340 (606)
T 3t6q_A 262 QKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340 (606)
T ss_dssp TTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCB
T ss_pred ecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccc
Confidence 223333566677777777777776 567777777777777777777653 255677777777766654
Q ss_pred CCc-cCcCCCCCCEEEccCCccccCC--CcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCc-c
Q 036034 158 IPS-TLGHLNRIRILDLSENKLVGPI--PSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPP-E 233 (482)
Q Consensus 158 ~~~-~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~ 233 (482)
++. .+..+++|+.|++++|.+.+.. +..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..+. .
T Consensus 341 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 420 (606)
T 3t6q_A 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSP 420 (606)
T ss_dssp CCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCT
T ss_pred cchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchh
Confidence 443 3666677777777777666443 55566667777777777766666666666666777777777766655443 3
Q ss_pred CcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCcccc---chhhcCCCCCCEEECCCCccccccCccCC---
Q 036034 234 LMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKI---LSELGAIPSIDTVDLSMNNLSGSIPKSVR--- 307 (482)
Q Consensus 234 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~---~~~~~~~~~L~~l~l~~n~l~~~~p~~~~--- 307 (482)
+..+++|+.|++++|.+++..|..+..+++|++|++++|++.+.. +..+..+++|+.|++++|.+++..|..+.
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 566666777777766666666666666666666666666665422 23455666666666666666665555443
Q ss_pred CCCeEeccCCcCcccCC
Q 036034 308 KVPHLDVLGNNLEGEIP 324 (482)
Q Consensus 308 ~l~~l~~~~n~~~~~~~ 324 (482)
+++.+++++|.+.+..|
T Consensus 501 ~L~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSI 517 (606)
T ss_dssp TCCEEECCSSCCCGGGG
T ss_pred CCCEEECCCCccCcCCh
Confidence 35566666666655443
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=316.15 Aligned_cols=160 Identities=19% Similarity=0.195 Sum_probs=99.9
Q ss_pred CCCCCCEEEccCCccccCC--CcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCC-ccCcCCCCC
Q 036034 164 HLNRIRILDLSENKLVGPI--PSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIP-PELMNCSKL 240 (482)
Q Consensus 164 ~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L 240 (482)
.+++|+.|++++|.+++.. +..+..+++|+.|++++|.+.+..+ .+..+++|+.|++++|.+.+..+ ..+..+++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 4566777777777776432 4556666777777777776664333 36666667777776666665444 345666666
Q ss_pred CEEEcCCCcCcccCCccccCccCCCEEeccCCcCc-cccchhhcCCCCCCEEECCCCccccccCccCC---CCCeEeccC
Q 036034 241 MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFIN-GKILSELGAIPSIDTVDLSMNNLSGSIPKSVR---KVPHLDVLG 316 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~---~l~~l~~~~ 316 (482)
++|++++|.+.+..|..+..+++|+.|++++|.+. +.+|..+..+++|+.|++++|++++..|..+. +++.+++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 66666666666666666666666666666666665 34555566666666666666666665554443 355666666
Q ss_pred CcCcccCC
Q 036034 317 NNLEGEIP 324 (482)
Q Consensus 317 n~~~~~~~ 324 (482)
|.+.+..+
T Consensus 504 n~l~~~~~ 511 (570)
T 2z63_A 504 NQLKSVPD 511 (570)
T ss_dssp SCCSCCCT
T ss_pred CcCCCCCH
Confidence 66655443
No 13
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.9e-37 Score=322.88 Aligned_cols=316 Identities=20% Similarity=0.301 Sum_probs=233.7
Q ss_pred CCCCCCCCEEeccCCcccc-----------------CCCcccC--CCCCCCEEeCcCCcccccCCccccCCCCCCeeecc
Q 036034 1 MGRLRNLVHLDLSDNYLWG-----------------YIPPTLG--RLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIA 61 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~-----------------~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 61 (482)
++++++|++|+|++|.+++ .+|+.++ .+++|++|+|++|++.+.+|..|+++++|++|+|+
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls 523 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIA 523 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECT
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECc
Confidence 3578899999999999987 3888877 89999999999999998999999999999999999
Q ss_pred cCc-cee-ccCccccCC-------CCCCEEEccCCcccccCCc--cCcCCCCCCEEeCcCCcccccCCccccCCCCCCEE
Q 036034 62 SNH-INV-SIPLEIGNL-------NFLQVLDLSGNEIRGSIPS--TFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTL 130 (482)
Q Consensus 62 ~n~-l~~-~~~~~~~~l-------~~L~~L~L~~n~~~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 130 (482)
+|+ +++ .+|..++++ ++|++|+|++|.++ .+|. .++++++|+.|+|++|+++ .+| .++.+++|++|
T Consensus 524 ~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 998 887 677655544 48999999999988 7887 8888999999999999888 677 88888889999
Q ss_pred EcccccCcc------cccC-cCEEEcccCeecccCCccCcCCCC--CCEEEccCCccccCCCcCC---c--CCCCCCEEe
Q 036034 131 NMRSNLINA------SLVN-LTSLSLHYNNLTGPIPSTLGHLNR--IRILDLSENKLVGPIPSSV---G--HLTQLNTLN 196 (482)
Q Consensus 131 ~l~~n~i~~------~~~~-L~~L~l~~n~~~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~---~--~l~~L~~L~ 196 (482)
++++|.+.. .+++ |+.|++++|.++ .+|..+..+.. |+.|++++|.+.+.+|... . .+++|+.|+
T Consensus 601 ~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 601 KLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp ECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred ECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 998888763 2456 888888888888 67777766544 8888888888876554322 2 234677777
Q ss_pred ccCCccccccCccCc-CCCCCCeeeccCCcccCCCCccCcC--------CCCCCEEEcCCCcCcccCCcccc--CccCCC
Q 036034 197 MYSNQINGSIPLEIG-NLKRVEAVKLYDNKLDGPIPPELMN--------CSKLMELELGNNLLRGSIPSEIG--KLQELY 265 (482)
Q Consensus 197 l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~--------~~~L~~L~l~~n~l~~~~~~~~~--~~~~L~ 265 (482)
+++|.++ .+|..+. .+++|+.|++++|.+. .+|..+.. +++|+.|+|++|.++ .+|..+. .+++|+
T Consensus 680 Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~ 756 (876)
T 4ecn_A 680 LSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS 756 (876)
T ss_dssp CCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC
T ss_pred ccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC
Confidence 7777776 4554443 6677777777777776 44443332 226777777777776 5666665 677777
Q ss_pred EEeccCCcCccccchhhcCCCCCCEEECCC------CccccccCccC---CCCCeEeccCCcCcccCCC
Q 036034 266 YLDLSHNFINGKILSELGAIPSIDTVDLSM------NNLSGSIPKSV---RKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 266 ~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~------n~l~~~~p~~~---~~l~~l~~~~n~~~~~~~~ 325 (482)
.|++++|.+.+ +|..+..+++|+.|++++ |.+.+.+|..+ .+++.+++++|.+ +..|.
T Consensus 757 ~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDE 823 (876)
T ss_dssp EEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred EEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCH
Confidence 77777777775 566666777777777755 56666666544 3466677777777 44444
No 14
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=308.90 Aligned_cols=306 Identities=23% Similarity=0.286 Sum_probs=210.1
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++|++|++++|.+++..|..|..+++|++|+|++|++++..|..|+++++|++|++++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57888888888887766678888888888888888888777888888888888888888887 45555 7888888888
Q ss_pred cCCcccc-cCCccCcCCCCCCEEeCcCCcccccCCccccCCCCC--CEEEcccccC------------------------
Q 036034 85 SGNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQL--TTLNMRSNLI------------------------ 137 (482)
Q Consensus 85 ~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~l~~n~i------------------------ 137 (482)
++|.+++ .+|..++.+++|++|++++|++.+ ..+..+++| ++|++++|.+
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 8888876 467888888888888888887764 234444444 5555555544
Q ss_pred ----------------------------------------------------------cc----------cccCcCEEEc
Q 036034 138 ----------------------------------------------------------NA----------SLVNLTSLSL 149 (482)
Q Consensus 138 ----------------------------------------------------------~~----------~~~~L~~L~l 149 (482)
.. ..++|+.|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 10 0126778888
Q ss_pred ccCeecccCCccC-----cCCCCCCEEEccCCccccCCCc--------------------------CCcCCCCCCEEecc
Q 036034 150 HYNNLTGPIPSTL-----GHLNRIRILDLSENKLVGPIPS--------------------------SVGHLTQLNTLNMY 198 (482)
Q Consensus 150 ~~n~~~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~~--------------------------~~~~l~~L~~L~l~ 198 (482)
++|.+++.+|..+ ..+++|+.+++++|.+ .+|. .+..+++|++|+++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred ecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 8888887777766 4454444444444443 1120 01456777777777
Q ss_pred CCccccccCccCcCCCCCCeeeccCCcccC--CCCccCcCCCCCCEEEcCCCcCcccCCc-cccCccCCCEEeccCCcCc
Q 036034 199 SNQINGSIPLEIGNLKRVEAVKLYDNKLDG--PIPPELMNCSKLMELELGNNLLRGSIPS-EIGKLQELYYLDLSHNFIN 275 (482)
Q Consensus 199 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~L~l~~n~l~ 275 (482)
+|.+++..|..++.+++|+.|++++|++++ .+|..+..+++|+.|++++|.+++.+|. .+..+++|+.|++++|.+.
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 777777677777777777777777777765 3455667777777777777777764554 3566677777777777776
Q ss_pred cccchhhcCCCCCCEEECCCCccccccCcc---CCCCCeEeccCCcCcc
Q 036034 276 GKILSELGAIPSIDTVDLSMNNLSGSIPKS---VRKVPHLDVLGNNLEG 321 (482)
Q Consensus 276 ~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~---~~~l~~l~~~~n~~~~ 321 (482)
+..+..+. ++|+.|++++|+++ .+|.. +.+++.+++++|.+..
T Consensus 413 ~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 413 DTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp GGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred cchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 55554433 56777777777776 44442 3456677777777663
No 15
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=301.47 Aligned_cols=314 Identities=18% Similarity=0.147 Sum_probs=284.0
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
-+.++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 367888888886 5676653 6899999999999998899999999999999999999988899999999999999999
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeecccCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTGPIP 159 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~~~~ 159 (482)
|.++...+..|.++++|++|++++|.+.+..+..+.++++|++|++++|.+.. .+++|+.|++++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99997666778999999999999999998889999999999999999998864 36799999999999997766
Q ss_pred ccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCC
Q 036034 160 STLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSK 239 (482)
Q Consensus 160 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 239 (482)
..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|...+.++.......+|+.|++++|.+++..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 77899999999999999999888888999999999999999988888888877889999999999999655567889999
Q ss_pred CCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccC---CCCCeEeccC
Q 036034 240 LMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSV---RKVPHLDVLG 316 (482)
Q Consensus 240 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~---~~l~~l~~~~ 316 (482)
|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+ .+++.+++.+
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 9999999999998888889999999999999999999888999999999999999999998776554 4588999999
Q ss_pred CcCcccC
Q 036034 317 NNLEGEI 323 (482)
Q Consensus 317 n~~~~~~ 323 (482)
|++.+.+
T Consensus 330 N~l~c~c 336 (477)
T 2id5_A 330 NPLACDC 336 (477)
T ss_dssp SCEECSG
T ss_pred CCccCcc
Confidence 9987654
No 16
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.6e-37 Score=322.07 Aligned_cols=298 Identities=23% Similarity=0.346 Sum_probs=256.6
Q ss_pred CCcccCCCCCCCEEeCcCCcccc-----------------cCCcccc--CCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 21 IPPTLGRLSKLENLHLSSNSLVG-----------------NIPSTLG--HLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 21 ~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
+|..|+++++|++|+|++|++++ .+|..++ ++++|++|+|++|.+.+.+|..|+++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78889999999999999999998 3899988 9999999999999999999999999999999
Q ss_pred EEccCCc-ccc-cCCccCcCCC-------CCCEEeCcCCcccccCCc--cccCCCCCCEEEcccccCcc-----cccCcC
Q 036034 82 LDLSGNE-IRG-SIPSTFGHLK-------RLKSLDLSQNKLVGPIPS--SLGHLTQLTTLNMRSNLINA-----SLVNLT 145 (482)
Q Consensus 82 L~L~~n~-~~~-~~~~~l~~l~-------~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~l~~n~i~~-----~~~~L~ 145 (482)
|+|++|+ +++ .+|..++.++ +|++|++++|++. .+|. .++++++|++|++++|.+.. .+++|+
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp~~~~L~~L~ 598 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLEAFGTNVKLT 598 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCCCCCTTSEES
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccchhhcCCCcce
Confidence 9999998 887 7887666554 9999999999999 7888 89999999999999999873 257899
Q ss_pred EEEcccCeecccCCccCcCCCC-CCEEEccCCccccCCCcCCcCCCC--CCEEeccCCccccccCcc---Cc--CCCCCC
Q 036034 146 SLSLHYNNLTGPIPSTLGHLNR-IRILDLSENKLVGPIPSSVGHLTQ--LNTLNMYSNQINGSIPLE---IG--NLKRVE 217 (482)
Q Consensus 146 ~L~l~~n~~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~---~~--~l~~L~ 217 (482)
.|++++|.++ .+|..+..+++ |+.|++++|.+. .+|..+..++. |+.|++++|.+.+.+|.. +. .+++|+
T Consensus 599 ~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~ 676 (876)
T 4ecn_A 599 DLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAS 676 (876)
T ss_dssp EEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEE
T ss_pred EEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcC
Confidence 9999999999 88989999999 999999999998 78888877654 999999999999866533 22 345899
Q ss_pred eeeccCCcccCCCCccC-cCCCCCCEEEcCCCcCcccCCccccC--------ccCCCEEeccCCcCccccchhhc--CCC
Q 036034 218 AVKLYDNKLDGPIPPEL-MNCSKLMELELGNNLLRGSIPSEIGK--------LQELYYLDLSHNFINGKILSELG--AIP 286 (482)
Q Consensus 218 ~L~l~~n~l~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~~~~~~--------~~~L~~L~l~~n~l~~~~~~~~~--~~~ 286 (482)
.|++++|.+. .+|..+ ..+++|+.|+|++|.++ .+|..+.. +++|+.|+|++|++. .+|..+. .++
T Consensus 677 ~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~ 753 (876)
T 4ecn_A 677 TVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLP 753 (876)
T ss_dssp EEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCT
T ss_pred EEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCC
Confidence 9999999999 566554 58999999999999998 66655433 349999999999999 6777776 899
Q ss_pred CCCEEECCCCccccccCcc---CCCCCeEeccC------CcCcccCCC
Q 036034 287 SIDTVDLSMNNLSGSIPKS---VRKVPHLDVLG------NNLEGEIPS 325 (482)
Q Consensus 287 ~L~~l~l~~n~l~~~~p~~---~~~l~~l~~~~------n~~~~~~~~ 325 (482)
+|+.|++++|++++ +|.. +.+++.+++++ |.+.+..|.
T Consensus 754 ~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~ 800 (876)
T 4ecn_A 754 YLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPT 800 (876)
T ss_dssp TCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCT
T ss_pred CcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChH
Confidence 99999999999998 5654 45688899976 666666664
No 17
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.7e-36 Score=306.04 Aligned_cols=305 Identities=24% Similarity=0.279 Sum_probs=168.1
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+++++|++++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|++++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 45667777777766555566677777777777777777666666777777777777777766 34544 5667777777
Q ss_pred cCCcccc-cCCccCcCCCCCCEEeCcCCcccccCCccccCCCCC--CEEEcccccC--ccc-------------------
Q 036034 85 SGNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQL--TTLNMRSNLI--NAS------------------- 140 (482)
Q Consensus 85 ~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~l~~n~i--~~~------------------- 140 (482)
++|.+++ ..|..++++++|++|++++|++.+. .+..+++| ++|++++|.+ ...
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 7777664 2346666777777777777666542 23333333 5666555544 100
Q ss_pred ---------------------------------------------------------------------ccCcCEEEccc
Q 036034 141 ---------------------------------------------------------------------LVNLTSLSLHY 151 (482)
Q Consensus 141 ---------------------------------------------------------------------~~~L~~L~l~~ 151 (482)
..+|+.|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 01455556666
Q ss_pred CeecccCCccC-----cCC--------------------------CCCCEEEccCCccccCCCcCCcCCCCCCEEeccCC
Q 036034 152 NNLTGPIPSTL-----GHL--------------------------NRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSN 200 (482)
Q Consensus 152 n~~~~~~~~~~-----~~l--------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 200 (482)
|.+++.+|..+ ..+ .+|+.|++++|.+.... ....+++|++|++++|
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCC
Confidence 66655555443 111 11222222222221100 0144556666666666
Q ss_pred ccccccCccCcCCCCCCeeeccCCcccCC--CCccCcCCCCCCEEEcCCCcCcccCCc-cccCccCCCEEeccCCcCccc
Q 036034 201 QINGSIPLEIGNLKRVEAVKLYDNKLDGP--IPPELMNCSKLMELELGNNLLRGSIPS-EIGKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 201 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~L~l~~n~l~~~ 277 (482)
.+++..|..+..+++|+.|++++|++++. +|..+..+++|+.|++++|.+++.+|. .+..+++|+.|++++|.+.+.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 66655555666666666666666666542 234455566666666666666553433 345556666666666665544
Q ss_pred cchhhcCCCCCCEEECCCCccccccCcc---CCCCCeEeccCCcCc
Q 036034 278 ILSELGAIPSIDTVDLSMNNLSGSIPKS---VRKVPHLDVLGNNLE 320 (482)
Q Consensus 278 ~~~~~~~~~~L~~l~l~~n~l~~~~p~~---~~~l~~l~~~~n~~~ 320 (482)
.+..+. ++|+.|++++|+++ .+|.. +.++..+++++|.+.
T Consensus 444 ~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 444 VFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp GGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred hhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 433322 45666666666555 23332 234555566666555
No 18
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-36 Score=292.88 Aligned_cols=307 Identities=19% Similarity=0.200 Sum_probs=269.4
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..+..|.++++|++|++++|.+++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 36889999999999976555668899999999999999998888899999999999999999998888889999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc----cccCcCEEEcccCeecccC
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA----SLVNLTSLSLHYNNLTGPI 158 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L~~L~l~~n~~~~~~ 158 (482)
++++|.++...+..+..+++|++|++++|++.+..|..+..+++|++|++++|.+.. .+++|+.|++++|.+++.
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~- 201 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL- 201 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc-
Confidence 999999985555557999999999999999998888889999999999999999874 478999999999988742
Q ss_pred CccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCC
Q 036034 159 PSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCS 238 (482)
Q Consensus 159 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 238 (482)
....+|+.|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..|..+..++
T Consensus 202 ----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (390)
T 3o6n_A 202 ----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272 (390)
T ss_dssp ----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccc
Confidence 3346799999999999754 332 347899999999999864 5788999999999999999988888999999
Q ss_pred CCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCCCCCeEeccCCc
Q 036034 239 KLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVRKVPHLDVLGNN 318 (482)
Q Consensus 239 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~~l~~l~~~~n~ 318 (482)
+|+.|++++|.+++ +|..+..+++|+.|++++|++. .++..+..+++|+.|++++|+++......+.+++.+++++|+
T Consensus 273 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 273 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHND 350 (390)
T ss_dssp SCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSC
T ss_pred cCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCC
Confidence 99999999999985 5666778999999999999998 456667888999999999999998877778889999999998
Q ss_pred Ccc
Q 036034 319 LEG 321 (482)
Q Consensus 319 ~~~ 321 (482)
+.+
T Consensus 351 ~~~ 353 (390)
T 3o6n_A 351 WDC 353 (390)
T ss_dssp EEH
T ss_pred ccc
Confidence 864
No 19
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8e-36 Score=307.15 Aligned_cols=307 Identities=20% Similarity=0.205 Sum_probs=266.2
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
+++++.|++++|.+....+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57889999999999776666788899999999999999988888999999999999999999988888889999999999
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc----cccCcCEEEcccCeecccCC
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA----SLVNLTSLSLHYNNLTGPIP 159 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L~~L~l~~n~~~~~~~ 159 (482)
|++|.++...+..|+.+++|++|+|++|.+.+..|..++.+++|++|++++|.+.. .+++|+.|++++|.+++.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l-- 207 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL-- 207 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEE--
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccc--
Confidence 99999996666667999999999999999998888889999999999999999874 478999999999988742
Q ss_pred ccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCC
Q 036034 160 STLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSK 239 (482)
Q Consensus 160 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 239 (482)
....+|+.|++++|.+... +..+ .++|+.|++++|.+++ +..+..+++|+.|++++|.+.+..|..+..+++
T Consensus 208 ---~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 208 ---AIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp ---ECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred ---cCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccC
Confidence 3456789999999998743 3322 3689999999999986 467888999999999999999888888999999
Q ss_pred CCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCCCCCeEeccCCcC
Q 036034 240 LMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVRKVPHLDVLGNNL 319 (482)
Q Consensus 240 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~~l~~l~~~~n~~ 319 (482)
|+.|++++|.+++ +|..+..+++|+.|++++|.+. .+|..+..+++|+.|++++|++++..+..+..+..+++++|++
T Consensus 280 L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~ 357 (597)
T 3oja_B 280 LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDW 357 (597)
T ss_dssp CCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCE
T ss_pred CCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCC
Confidence 9999999999985 5666778899999999999998 5667778889999999999999988777888899999999998
Q ss_pred ccc
Q 036034 320 EGE 322 (482)
Q Consensus 320 ~~~ 322 (482)
.+.
T Consensus 358 ~~~ 360 (597)
T 3oja_B 358 DCN 360 (597)
T ss_dssp EHH
T ss_pred CCh
Confidence 754
No 20
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=316.71 Aligned_cols=318 Identities=25% Similarity=0.280 Sum_probs=227.3
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccC-CccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNI-PSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.+++++|||++|.+++..|..|..+++|++|+|++|...+.+ |..|+++++|++|+|++|.+++..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 467899999999998888889999999999999999655454 7889999999999999999998889999999999999
Q ss_pred EccCCcccccCCcc--CcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCccc-------c--cCcCEEEcc
Q 036034 83 DLSGNEIRGSIPST--FGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINAS-------L--VNLTSLSLH 150 (482)
Q Consensus 83 ~L~~n~~~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~-------~--~~L~~L~l~ 150 (482)
+|++|.+++.+|.. ++++++|++|+|++|.+.+..+ ..++++++|++|++++|.+... + ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999998766655 8899999999999999987654 5789999999999999987542 2 567777777
Q ss_pred cCeecccCCccCcCCCC------CCEEEccCCccccCCCcCCcC------------------------------------
Q 036034 151 YNNLTGPIPSTLGHLNR------IRILDLSENKLVGPIPSSVGH------------------------------------ 188 (482)
Q Consensus 151 ~n~~~~~~~~~~~~l~~------L~~L~l~~n~l~~~~~~~~~~------------------------------------ 188 (482)
+|.+.+..|..+..+.+ |+.|++++|.+.+..+..+..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 77777666655554443 666666666554433322211
Q ss_pred --CCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCE
Q 036034 189 --LTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYY 266 (482)
Q Consensus 189 --l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 266 (482)
.++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..|..+..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 145666666666666555666666666666666666666555556666666666666666666555666666666666
Q ss_pred EeccCCcCccccchhhcCCCCCCEEECCCCcccc------------------ccCccCCCCCeEeccCCcCcc
Q 036034 267 LDLSHNFINGKILSELGAIPSIDTVDLSMNNLSG------------------SIPKSVRKVPHLDVLGNNLEG 321 (482)
Q Consensus 267 L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~------------------~~p~~~~~l~~l~~~~n~~~~ 321 (482)
|++++|.+.+..+..+..+++|+.|++++|.+++ .+|.....+..+++++|.+.+
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~ 415 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLEN 415 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCS
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCcccc
Confidence 6666666655555555666666666666665553 233344456667777776665
No 21
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-34 Score=303.93 Aligned_cols=318 Identities=25% Similarity=0.253 Sum_probs=190.8
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCccee-----ccCc----cccCCC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINV-----SIPL----EIGNLN 77 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----~~~~----~~~~l~ 77 (482)
|++|++++|.+++..|..|+.+++|++|++++|.+++..|..|.++++|++|++++|...+ .+|. .|..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 5555555555555555555555555555555555555555555555555555554433221 1111 344555
Q ss_pred CCCEEEccCCcccccCCccCcCCCCCCEEeCcCC----------------------------cccccCCccccCCCCCCE
Q 036034 78 FLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQN----------------------------KLVGPIPSSLGHLTQLTT 129 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n----------------------------~l~~~~~~~l~~l~~L~~ 129 (482)
+|++|++++|.+.+..+..+..+++|++|++++| ++.+..|..+..+++|++
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 5666666666665555555555555555544443 344444455555666666
Q ss_pred EEcccccCcc--------cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccc--cCCCcCCcCCCCCCEEeccC
Q 036034 130 LNMRSNLINA--------SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLV--GPIPSSVGHLTQLNTLNMYS 199 (482)
Q Consensus 130 L~l~~n~i~~--------~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~ 199 (482)
|++++|.+.+ .+++|+.|++++|.+.+..+..+..+++|+.|++++|.+. +..|..+..+++|+.|++++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 6666665542 1345666666666666555556666666666666666654 34566667777777777777
Q ss_pred CccccccCccCcCCCCCCeeeccCCcccCCC--------CccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccC
Q 036034 200 NQINGSIPLEIGNLKRVEAVKLYDNKLDGPI--------PPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSH 271 (482)
Q Consensus 200 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 271 (482)
|.+++..+..+..+++|+.|++++|++++.. +..+..+++|+.|++++|.++...+..+..+++|+.|++++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 7777655566677777777777777765421 12356667777777777777743334567777777777777
Q ss_pred CcCccccchhhcCCCCCCEEECCCCccccccCc----cCCCCCeEeccCCcCcccCC
Q 036034 272 NFINGKILSELGAIPSIDTVDLSMNNLSGSIPK----SVRKVPHLDVLGNNLEGEIP 324 (482)
Q Consensus 272 n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~----~~~~l~~l~~~~n~~~~~~~ 324 (482)
|++++..+..+..+++|+.|++++|.+++..|. .+.++..+++.+|++.+.++
T Consensus 570 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 570 NNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777765555667777777777777777766554 34567777777777766554
No 22
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=301.48 Aligned_cols=318 Identities=22% Similarity=0.250 Sum_probs=189.1
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
++++|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|.++...|..|.++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 46666666666655555566666666666666666665555566666666666666666665555566666666666666
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccCccc-------ccCc----CEEEcccCe
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINAS-------LVNL----TSLSLHYNN 153 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~~-------~~~L----~~L~l~~n~ 153 (482)
+|.++...+..++++++|++|++++|.+.+ .+|..++++++|++|++++|.+... +.+| ..+++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 666654444456666666666666666554 2455566666666666665554321 1112 222222222
Q ss_pred ec------------------------------------------------------------------------------
Q 036034 154 LT------------------------------------------------------------------------------ 155 (482)
Q Consensus 154 ~~------------------------------------------------------------------------------ 155 (482)
++
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 11
Q ss_pred ---ccCCccCcCCCCCCEEEccCCccccCCCcCC------------------------------------------cCCC
Q 036034 156 ---GPIPSTLGHLNRIRILDLSENKLVGPIPSSV------------------------------------------GHLT 190 (482)
Q Consensus 156 ---~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------------------------------------~~l~ 190 (482)
+..|..+..+++|+.|++++|.+. .+|..+ ..++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCT
T ss_pred hhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCC
Confidence 111122222333333333333332 111111 3456
Q ss_pred CCCEEeccCCcccccc--CccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCC-ccccCccCCCEE
Q 036034 191 QLNTLNMYSNQINGSI--PLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIP-SEIGKLQELYYL 267 (482)
Q Consensus 191 ~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L 267 (482)
+|+.|++++|.+++.. +..+..+++|+.|++++|.+.+..+ .+..+++|+.|++++|.+.+..+ ..+..+++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 7777777777776543 5566777778888888877765433 37777788888888877776554 456777788888
Q ss_pred eccCCcCccccchhhcCCCCCCEEECCCCccc-cccCccC---CCCCeEeccCCcCcccCCC
Q 036034 268 DLSHNFINGKILSELGAIPSIDTVDLSMNNLS-GSIPKSV---RKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 268 ~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~-~~~p~~~---~~l~~l~~~~n~~~~~~~~ 325 (482)
++++|.+.+..+..+..+++|+.|++++|.+. +.+|..+ .+++.+++++|.+.+..|.
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 488 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChh
Confidence 88888777777777777788888888888776 4556544 4466777777777766544
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.2e-36 Score=307.13 Aligned_cols=317 Identities=21% Similarity=0.262 Sum_probs=166.2
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+|++|++++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|++++|.+++..|..|+++++|++|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 45555555555555555555555555555555555555555555555555555555555554444445555555555555
Q ss_pred CCcccc-cCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCcc------------------------
Q 036034 86 GNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINA------------------------ 139 (482)
Q Consensus 86 ~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~------------------------ 139 (482)
+|.+++ ..|..++++++|++|++++|.+.+.+| ..+.++++|++|++++|.+.+
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 555543 234445555555555555554222222 344444444444444444331
Q ss_pred -------cccCcCEEEcccCeecccC--Ccc-----------------------------CcC-----------------
Q 036034 140 -------SLVNLTSLSLHYNNLTGPI--PST-----------------------------LGH----------------- 164 (482)
Q Consensus 140 -------~~~~L~~L~l~~n~~~~~~--~~~-----------------------------~~~----------------- 164 (482)
.+++|+.|++++|.+++.. +.. +..
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~ 266 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECC
T ss_pred cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccc
Confidence 1456666666666655421 000 000
Q ss_pred ------------------------------------------CCCCCEEEccCCccccCCCcCC-cCCCCCCEEeccCCc
Q 036034 165 ------------------------------------------LNRIRILDLSENKLVGPIPSSV-GHLTQLNTLNMYSNQ 201 (482)
Q Consensus 165 ------------------------------------------l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~ 201 (482)
..+|+.|++++|.+. .+|..+ ..+++|+.|++++|.
T Consensus 267 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp SCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSC
T ss_pred ccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCc
Confidence 122333333333332 233333 345666666666666
Q ss_pred cccccC---ccCcCCCCCCeeeccCCcccCCCC--ccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 202 INGSIP---LEIGNLKRVEAVKLYDNKLDGPIP--PELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 202 l~~~~~---~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+++..| ..++.+++|+.|++++|++++..+ ..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 655442 234555666666666666553221 23455556666666666555 445555555555555555555432
Q ss_pred ccch-----------------hhcCCCCCCEEECCCCccccccCc--cCCCCCeEeccCCcCcccCCC
Q 036034 277 KILS-----------------ELGAIPSIDTVDLSMNNLSGSIPK--SVRKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 277 ~~~~-----------------~~~~~~~L~~l~l~~n~l~~~~p~--~~~~l~~l~~~~n~~~~~~~~ 325 (482)
.... ....+++|+.|++++|+++ .+|. .+.++..+++++|.+.+..|.
T Consensus 425 l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~ 491 (549)
T 2z81_A 425 VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDG 491 (549)
T ss_dssp CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTT
T ss_pred ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHH
Confidence 1100 0135778888888888887 3443 255688888888888776554
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=299.38 Aligned_cols=305 Identities=23% Similarity=0.274 Sum_probs=260.3
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
++||+++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|++++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 68999999997 5777665 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccCcc----cccCc--CEEEcccCee--cccC
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINA----SLVNL--TSLSLHYNNL--TGPI 158 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L--~~L~l~~n~~--~~~~ 158 (482)
.++ .+|.. .+++|++|++++|.+++ .+|..++++++|++|++++|.+.. .+++| +.|++++|.+ .+..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~ 156 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCC
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccc
Confidence 998 56666 89999999999999987 478999999999999999999874 35677 9999999988 5566
Q ss_pred CccCcCCC------------------------------------------------------------------------
Q 036034 159 PSTLGHLN------------------------------------------------------------------------ 166 (482)
Q Consensus 159 ~~~~~~l~------------------------------------------------------------------------ 166 (482)
|..+..+.
T Consensus 157 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHH
T ss_pred cccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHH
Confidence 65555432
Q ss_pred -----------CCCEEEccCCccccCCCcCC-----cCCCCCCEEeccCCccccccC-----------------------
Q 036034 167 -----------RIRILDLSENKLVGPIPSSV-----GHLTQLNTLNMYSNQINGSIP----------------------- 207 (482)
Q Consensus 167 -----------~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~----------------------- 207 (482)
+|+.|++++|.+.+.+|..+ ..+++|+.++++.|.+ .+|
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l 314 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRM 314 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcc
Confidence 67777777777777777777 6666666666655554 222
Q ss_pred --cc-CcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcc--cCCccccCccCCCEEeccCCcCccccch-h
Q 036034 208 --LE-IGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRG--SIPSEIGKLQELYYLDLSHNFINGKILS-E 281 (482)
Q Consensus 208 --~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~ 281 (482)
.. ...+++|+.|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.+.+.+|. .
T Consensus 315 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 315 VHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394 (520)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS
T ss_pred ccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch
Confidence 01 1678899999999999999899999999999999999999986 5567789999999999999999985555 4
Q ss_pred hcCCCCCCEEECCCCccccccCccC-CCCCeEeccCCcCc
Q 036034 282 LGAIPSIDTVDLSMNNLSGSIPKSV-RKVPHLDVLGNNLE 320 (482)
Q Consensus 282 ~~~~~~L~~l~l~~n~l~~~~p~~~-~~l~~l~~~~n~~~ 320 (482)
+..+++|+.|++++|.+++..|..+ .+++.+++++|.+.
T Consensus 395 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 395 CSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred hccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 7889999999999999999888887 58999999999987
No 25
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.2e-35 Score=306.03 Aligned_cols=317 Identities=23% Similarity=0.237 Sum_probs=188.6
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|++++|.++...+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 46777777777776655566777777777777777777766777777777777777777777444445777777777777
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc---------ccCcCEEEcccCeec
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS---------LVNLTSLSLHYNNLT 155 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~---------~~~L~~L~l~~n~~~ 155 (482)
++|.+++..|..|+++++|++|++++|.+.+..|..+.++++|++|++++|.+.+. +++|+.|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 77777665666777777777777777777766666677777777777777765431 245556666655555
Q ss_pred ccCC---------------------------------------------------ccCcCCCC--CCEEEccCCccccCC
Q 036034 156 GPIP---------------------------------------------------STLGHLNR--IRILDLSENKLVGPI 182 (482)
Q Consensus 156 ~~~~---------------------------------------------------~~~~~l~~--L~~L~l~~n~l~~~~ 182 (482)
+..| ..+..+.. |+.|++++|.+.+..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 4433 33333322 666666666665555
Q ss_pred CcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC-----CCCc----cCcCCCCCCEEEcCCCcCccc
Q 036034 183 PSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG-----PIPP----ELMNCSKLMELELGNNLLRGS 253 (482)
Q Consensus 183 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----~~~~----~~~~~~~L~~L~l~~n~l~~~ 253 (482)
|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|...+ .+|. .+..+++|++|++++|.+++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 5556666666666666666655555555554444444444433221 1111 344455556666666655555
Q ss_pred CCccccCccCCCEEeccCC----------------------------cCccccchhhcCCCCCCEEECCCCccccccCc-
Q 036034 254 IPSEIGKLQELYYLDLSHN----------------------------FINGKILSELGAIPSIDTVDLSMNNLSGSIPK- 304 (482)
Q Consensus 254 ~~~~~~~~~~L~~L~l~~n----------------------------~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~- 304 (482)
.+..+..+++|++|++++| .+.+..+..+..+++|+.|++++|.+++.+|.
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 5555555555555444443 33333444455555666666666666554431
Q ss_pred c---CCCCCeEeccCCcCcc
Q 036034 305 S---VRKVPHLDVLGNNLEG 321 (482)
Q Consensus 305 ~---~~~l~~l~~~~n~~~~ 321 (482)
. +.++..+++++|.+.+
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~ 444 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQ 444 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEE
T ss_pred cccCcccccEEecCCCCcce
Confidence 2 2335555555555443
No 26
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=312.94 Aligned_cols=322 Identities=23% Similarity=0.230 Sum_probs=256.4
Q ss_pred CCCCCCCCEEeccCCccccCC-CcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCcc--ccCCC
Q 036034 1 MGRLRNLVHLDLSDNYLWGYI-PPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLE--IGNLN 77 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~l~ 77 (482)
++++++|++|+|++|...+.+ |..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|.. +.+++
T Consensus 44 ~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~ 123 (844)
T 3j0a_A 44 FPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123 (844)
T ss_dssp CSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCS
T ss_pred CcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccC
Confidence 467899999999999655555 788999999999999999999999999999999999999999998766655 89999
Q ss_pred CCCEEEccCCcccccCC-ccCcCCCCCCEEeCcCCcccccCCccccCC--CCCCEEEcccccCcccc-------c-----
Q 036034 78 FLQVLDLSGNEIRGSIP-STFGHLKRLKSLDLSQNKLVGPIPSSLGHL--TQLTTLNMRSNLINASL-------V----- 142 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~l~~n~i~~~~-------~----- 142 (482)
+|++|+|++|.+++..+ ..|+++++|++|++++|.+++..+..+..+ ++|+.|+++.|.+.... .
T Consensus 124 ~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 203 (844)
T 3j0a_A 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203 (844)
T ss_dssp SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTT
T ss_pred CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCcccc
Confidence 99999999999987654 679999999999999999988888888777 78888888888776421 1
Q ss_pred -CcCEEEcccCeecccCCccCcC--------------------------------------CCCCCEEEccCCccccCCC
Q 036034 143 -NLTSLSLHYNNLTGPIPSTLGH--------------------------------------LNRIRILDLSENKLVGPIP 183 (482)
Q Consensus 143 -~L~~L~l~~n~~~~~~~~~~~~--------------------------------------l~~L~~L~l~~n~l~~~~~ 183 (482)
.|+.|++++|.+++..+..+.. .++|+.|++++|.+.+..+
T Consensus 204 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp CCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred CceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 2788888888766544433221 2568888888888887777
Q ss_pred cCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccC
Q 036034 184 SSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQE 263 (482)
Q Consensus 184 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~ 263 (482)
..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 78888888888888888888777778888888888888888888777778888888888888888887766777788888
Q ss_pred CCEEeccCCcCccccc--------------hh-hcCCCCCCEEECCCCccccccCc----cCCCCCeEeccCCcCccc
Q 036034 264 LYYLDLSHNFINGKIL--------------SE-LGAIPSIDTVDLSMNNLSGSIPK----SVRKVPHLDVLGNNLEGE 322 (482)
Q Consensus 264 L~~L~l~~n~l~~~~~--------------~~-~~~~~~L~~l~l~~n~l~~~~p~----~~~~l~~l~~~~n~~~~~ 322 (482)
|+.|++++|.+.+... .. ......++.+++++|.+.+.... .+.+++.+++++|.+.+.
T Consensus 364 L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~ 441 (844)
T 3j0a_A 364 LQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSC 441 (844)
T ss_dssp CCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCC
T ss_pred CCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccc
Confidence 8888888887764211 00 01134577888888888864321 467799999999999854
No 27
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.4e-35 Score=284.69 Aligned_cols=288 Identities=20% Similarity=0.207 Sum_probs=256.3
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
++++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|++|++++|.++...+..|.++++|++|
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 57899999999999988878899999999999999999998888899999999999999999995444557999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc--cccCcCEEEcccCeecccCCc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA--SLVNLTSLSLHYNNLTGPIPS 160 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~--~~~~L~~L~l~~n~~~~~~~~ 160 (482)
++++|.+++..+..+..+++|++|++++|++++. .+..+++|++|++++|.+.. ...+|+.|++++|.+... |.
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~ 222 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RG 222 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-EC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccccCCCCcceEEECCCCeeeec-cc
Confidence 9999999988888999999999999999999864 46778999999999999875 467899999999999855 32
Q ss_pred cCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 161 TLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 161 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++ ++..+..+++|
T Consensus 223 ~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L 297 (390)
T 3o6n_A 223 P--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 297 (390)
T ss_dssp C--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTC
T ss_pred c--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCC
Confidence 2 357899999999999853 678899999999999999998889999999999999999999985 56667789999
Q ss_pred CEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 241 MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
+.|++++|.++ .+|..+..+++|+.|++++|++.... +..+++|+.+++++|++.+...
T Consensus 298 ~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 298 KVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp CEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH
T ss_pred CEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhH
Confidence 99999999998 67777889999999999999998542 6778999999999999987543
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.9e-34 Score=295.84 Aligned_cols=318 Identities=23% Similarity=0.230 Sum_probs=239.0
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
++++|||++|.+++..+..|.++++|++|+|++|++++..+.+|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68999999999987777889999999999999999998888889999999999999999987666778999999999999
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccCccc------------------------
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINAS------------------------ 140 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~~------------------------ 140 (482)
+|.+++..+..|+++++|++|++++|.+.+ ..|..++.+++|++|++++|.+.+.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999987777788999999999999998875 3577788889999998888765310
Q ss_pred --------------------------------------------------------------------------------
Q 036034 141 -------------------------------------------------------------------------------- 140 (482)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (482)
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence
Q ss_pred ----------------------------------ccCcCEEEcccCeecccCCc-------------------cCcCCCC
Q 036034 141 ----------------------------------LVNLTSLSLHYNNLTGPIPS-------------------TLGHLNR 167 (482)
Q Consensus 141 ----------------------------------~~~L~~L~l~~n~~~~~~~~-------------------~~~~l~~ 167 (482)
...++.|++.+|.+.+..+. ....+++
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~ 372 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 372 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTT
T ss_pred ccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccc
Confidence 00123333333333211110 1113445
Q ss_pred CCEEEccCCccc-------------------------------------------------cC-CCcCCcCCCCCCEEec
Q 036034 168 IRILDLSENKLV-------------------------------------------------GP-IPSSVGHLTQLNTLNM 197 (482)
Q Consensus 168 L~~L~l~~n~l~-------------------------------------------------~~-~~~~~~~l~~L~~L~l 197 (482)
|+.|+++.|.+. .. .+..+..+++++.+++
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~l 452 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEEC
T ss_pred cccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 556665555431 11 1123445666777777
Q ss_pred cCCccccccCccCcCCCCCCeeeccCCccc-CCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 198 YSNQINGSIPLEIGNLKRVEAVKLYDNKLD-GPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 198 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+.|.+.+..+..+..+++++.|++++|.+. +..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++.+
T Consensus 453 s~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~ 532 (635)
T 4g8a_A 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532 (635)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCB
T ss_pred cccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCC
Confidence 777777767777777888888888888743 3466778888888888888888888888888888888888888888888
Q ss_pred ccchhhcCCCCCCEEECCCCccccccCccCC----CCCeEeccCCcCcccC
Q 036034 277 KILSELGAIPSIDTVDLSMNNLSGSIPKSVR----KVPHLDVLGNNLEGEI 323 (482)
Q Consensus 277 ~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~----~l~~l~~~~n~~~~~~ 323 (482)
..+..+..+++|+.|++++|++++..|..+. +++.+++++|++.+.+
T Consensus 533 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 533 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 7777888888888888888888888777653 4677888888887654
No 29
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.6e-34 Score=294.29 Aligned_cols=309 Identities=22% Similarity=0.240 Sum_probs=253.8
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
...+++|+++|.+++ +|..+. ++|++|+|++|.+++..|..|.++++|++|++++|++++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 345899999999974 777664 89999999999999888889999999999999999999888999999999999999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccCcc----cccCc--CEEEcccCee--c
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLINA----SLVNL--TSLSLHYNNL--T 155 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L--~~L~l~~n~~--~ 155 (482)
++|.++ .+|.. .+++|++|++++|++.+ ..|..++++++|++|++++|.+.. .+++| +.|++++|.+ +
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeeccccccc
Confidence 999998 56666 89999999999999986 346899999999999999999874 34566 9999999988 6
Q ss_pred ccCCccCcCCC---------------------------------------------------------------------
Q 036034 156 GPIPSTLGHLN--------------------------------------------------------------------- 166 (482)
Q Consensus 156 ~~~~~~~~~l~--------------------------------------------------------------------- 166 (482)
+..|..+..+.
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHH
Confidence 66665554432
Q ss_pred ------------CCCEEEccCCccccCCCcCC-----cCC--------------------------CCCCEEeccCCccc
Q 036034 167 ------------RIRILDLSENKLVGPIPSSV-----GHL--------------------------TQLNTLNMYSNQIN 203 (482)
Q Consensus 167 ------------~L~~L~l~~n~l~~~~~~~~-----~~l--------------------------~~L~~L~l~~n~l~ 203 (482)
+|++|++++|.+.+.+|..+ ..+ .+|+.|++++|.+.
T Consensus 265 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~ 344 (562)
T 3a79_B 265 CSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI 344 (562)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcc
Confidence 55666666666666666554 222 23455555555443
Q ss_pred cccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCccc--CCccccCccCCCEEeccCCcCccccch-
Q 036034 204 GSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGS--IPSEIGKLQELYYLDLSHNFINGKILS- 280 (482)
Q Consensus 204 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~- 280 (482)
... ....+++|+.|++++|.+++..|..+..+++|+.|++++|.+++. +|..+..+++|+.|++++|.+.+.++.
T Consensus 345 ~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 345 HMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422 (562)
T ss_dssp CCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC
T ss_pred ccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh
Confidence 211 116789999999999999998999999999999999999999863 356788999999999999999985554
Q ss_pred hhcCCCCCCEEECCCCccccccCccC-CCCCeEeccCCcCcc
Q 036034 281 ELGAIPSIDTVDLSMNNLSGSIPKSV-RKVPHLDVLGNNLEG 321 (482)
Q Consensus 281 ~~~~~~~L~~l~l~~n~l~~~~p~~~-~~l~~l~~~~n~~~~ 321 (482)
.+..+++|+.|++++|.+++..|..+ .+++.+++++|.+..
T Consensus 423 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ 464 (562)
T 3a79_B 423 TCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMS 464 (562)
T ss_dssp CCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCC
T ss_pred hhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcc
Confidence 57889999999999999999888888 589999999999874
No 30
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-34 Score=297.04 Aligned_cols=288 Identities=20% Similarity=0.206 Sum_probs=258.7
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|+++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 57899999999999998888899999999999999999999888899999999999999999996555667999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc--cccCcCEEEcccCeecccCCc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA--SLVNLTSLSLHYNNLTGPIPS 160 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~--~~~~L~~L~l~~n~~~~~~~~ 160 (482)
+|++|.+++..|..|+.+++|++|++++|.+++. .++.+++|+.|++++|.+.. ...+|+.|++++|.+....+.
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~ 229 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 229 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc
Confidence 9999999988888999999999999999999864 36778999999999999875 467899999999998854333
Q ss_pred cCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 161 TLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 161 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
. .++|+.|++++|.+++ +..+..+++|+.|++++|.+++..|..++.+++|+.|++++|.+++ +|..+..+++|
T Consensus 230 ~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L 303 (597)
T 3oja_B 230 V---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 303 (597)
T ss_dssp C---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTC
T ss_pred c---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCC
Confidence 2 3689999999999985 4778999999999999999999999999999999999999999986 56677789999
Q ss_pred CEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 241 MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
+.|++++|.++ .+|..+..+++|+.|++++|.+.+.. +..+++|+.|++++|++.+..+
T Consensus 304 ~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 304 KVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH
T ss_pred cEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhH
Confidence 99999999998 67888899999999999999998643 6778999999999999987543
No 31
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.6e-35 Score=277.53 Aligned_cols=249 Identities=29% Similarity=0.472 Sum_probs=147.3
Q ss_pred CCCCEEeCcCCcccc--cCCccccCCCCCCeeeccc-CcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCE
Q 036034 29 SKLENLHLSSNSLVG--NIPSTLGHLTQLTTLAIAS-NHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKS 105 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 105 (482)
.++++|+|++|.+++ .+|..|.++++|++|++++ |.+.+.+|..|.++++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 355666666666665 5566666666666666663 5665556666666666666666666666556666666666666
Q ss_pred EeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC-CCCEEEccCCccccCCCc
Q 036034 106 LDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN-RIRILDLSENKLVGPIPS 184 (482)
Q Consensus 106 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~ 184 (482)
|++++|.+.+.+|..+..+++|++|++++|.+ ++.+|..+..+. +|+.|++++|.+.+..|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-----------------~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~ 192 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRI-----------------SGAIPDSYGSFSKLFTSMTISRNRLTGKIPP 192 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCC-----------------EEECCGGGGCCCTTCCEEECCSSEEEEECCG
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcc-----------------cCcCCHHHhhhhhcCcEEECcCCeeeccCCh
Confidence 66666666655666666666655555544433 233444455554 555555555555555555
Q ss_pred CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCC
Q 036034 185 SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQEL 264 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L 264 (482)
.+..+. |+.|++++|.+++..|..+..+++|+.|++++|.+++.++. +..+++|++|++++|.+++.+|..+..+++|
T Consensus 193 ~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 270 (313)
T 1ogq_A 193 TFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270 (313)
T ss_dssp GGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTC
T ss_pred HHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCC
Confidence 555554 55566666555555555555556666666666655544433 4555666666666666666666666666666
Q ss_pred CEEeccCCcCccccchhhcCCCCCCEEECCCCc
Q 036034 265 YYLDLSHNFINGKILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 265 ~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~ 297 (482)
++|++++|++.+.+|.. ..+++|+.+++++|+
T Consensus 271 ~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 271 HSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred CEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 66666666666555544 555666666666666
No 32
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-33 Score=271.74 Aligned_cols=299 Identities=26% Similarity=0.396 Sum_probs=257.7
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.+++|++|++++|.+.. ++ .+..+++|++|++++|++++. +. +.++++|++|++++|.++. + ..+.++++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEE
T ss_pred hcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEE
Confidence 46789999999999964 44 488899999999999999954 43 9999999999999999985 4 469999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-----cccCcCEEEcccCeeccc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-----SLVNLTSLSLHYNNLTGP 157 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-----~~~~L~~L~l~~n~~~~~ 157 (482)
++++|.+.+. +. +..+++|++|++++|..... +..+..+++|++|++++|.+.. .+++|+.|++++|.+.+.
T Consensus 116 ~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 116 YLNEDNISDI-SP-LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp ECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCC
T ss_pred ECcCCcccCc-hh-hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccc
Confidence 9999999854 43 88999999999999976543 4458999999999999998864 468999999999999854
Q ss_pred CCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCC
Q 036034 158 IPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNC 237 (482)
Q Consensus 158 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 237 (482)
.+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++. +.+..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 33 7889999999999999985433 7889999999999999986443 88999999999999999863 568899
Q ss_pred CCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC-ccCCCCCeEeccC
Q 036034 238 SKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP-KSVRKVPHLDVLG 316 (482)
Q Consensus 238 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p-~~~~~l~~l~~~~ 316 (482)
++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+..+..+++|+.+++++|++++..| ..+.+++.+++++
T Consensus 265 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~ 342 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFAN 342 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSC
T ss_pred CCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhh
Confidence 9999999999999854 458889999999999999998888899999999999999999998877 4577899999999
Q ss_pred CcCc
Q 036034 317 NNLE 320 (482)
Q Consensus 317 n~~~ 320 (482)
|+++
T Consensus 343 N~i~ 346 (347)
T 4fmz_A 343 QVIK 346 (347)
T ss_dssp C---
T ss_pred hccc
Confidence 9874
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-34 Score=295.22 Aligned_cols=290 Identities=23% Similarity=0.228 Sum_probs=191.7
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+..-..|.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|++++|++++..|..|+++++|++|+|
T Consensus 5 ~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 5 DASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp CTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 34445677777775 4565543 67888888888888777777888888888888888887777777888888888888
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccc-cCCccccCCCCCCEEEcccccC-c-------ccccCcCEEEcccCeec
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVG-PIPSSLGHLTQLTTLNMRSNLI-N-------ASLVNLTSLSLHYNNLT 155 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i-~-------~~~~~L~~L~l~~n~~~ 155 (482)
++|.+++..|..++.+++|++|++++|.+++ ..|..++++++|++|++++|.+ . ..+++|+.|++++|.++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 8888876666667888888888888888775 3456777888888888887763 2 12567778888888877
Q ss_pred ccCCccCcC------------------------CCCCCEEEccCCccccCC--Cc-CCcCCC------------------
Q 036034 156 GPIPSTLGH------------------------LNRIRILDLSENKLVGPI--PS-SVGHLT------------------ 190 (482)
Q Consensus 156 ~~~~~~~~~------------------------l~~L~~L~l~~n~l~~~~--~~-~~~~l~------------------ 190 (482)
+..|..+.. +++|+.|++++|.+.+.. +. ....++
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 766665544 345555555555554321 00 001111
Q ss_pred ---------------------------------------------------------------------CCCEEeccCCc
Q 036034 191 ---------------------------------------------------------------------QLNTLNMYSNQ 201 (482)
Q Consensus 191 ---------------------------------------------------------------------~L~~L~l~~n~ 201 (482)
+|+.|++++|.
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence 22223333333
Q ss_pred cccccCccC-cCCCCCCeeeccCCcccCCCC---ccCcCCCCCCEEEcCCCcCcccCC--ccccCccCCCEEeccCCcCc
Q 036034 202 INGSIPLEI-GNLKRVEAVKLYDNKLDGPIP---PELMNCSKLMELELGNNLLRGSIP--SEIGKLQELYYLDLSHNFIN 275 (482)
Q Consensus 202 l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~L~l~~n~l~~~~~--~~~~~~~~L~~L~l~~n~l~ 275 (482)
+. .+|..+ ..+++|+.|++++|.+.+.+| ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|++.
T Consensus 322 l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (549)
T 2z81_A 322 VF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400 (549)
T ss_dssp CC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc
Confidence 22 233333 356778888888888776553 235677888888888887764322 34677788888888888777
Q ss_pred cccchhhcCCCCCCEEECCCCccc
Q 036034 276 GKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 276 ~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
.+|..+..+++|+.|++++|.++
T Consensus 401 -~lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 401 -PMPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp -CCCSCCCCCTTCCEEECTTSCCS
T ss_pred -cCChhhcccccccEEECCCCCcc
Confidence 45556666666777766666665
No 34
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-34 Score=274.00 Aligned_cols=248 Identities=31% Similarity=0.472 Sum_probs=123.4
Q ss_pred CCCEEeccCCcccc--CCCcccCCCCCCCEEeCcC-CcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 6 NLVHLDLSDNYLWG--YIPPTLGRLSKLENLHLSS-NSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 6 ~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
+++.|+|++|.+++ .+|..+..+++|++|+|++ |.+.+.+|..|+++++|++|++++|.+++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 44555555555544 4455555555555555552 45554555555555555555555555554455555555555555
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCC-CCCEEEcccccCcccccCcCEEEcccCeecccCCcc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLT-QLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~ 161 (482)
++++|.+++.+|..+..+++|++|++++|++++.+|..+..++ +|++|+++ +|.+++..|..
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~-----------------~N~l~~~~~~~ 193 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS-----------------RNRLTGKIPPT 193 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC-----------------SSEEEEECCGG
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc-----------------CCeeeccCChH
Confidence 5555555544555555555555555555555544454444443 33333322 23333344444
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
+..+. |+.|++++|.+.+..|..+..+++|+.|++++|.+++..|. +..+++|+.|++++|.+++.+|..+..+++|+
T Consensus 194 ~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 271 (313)
T 1ogq_A 194 FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271 (313)
T ss_dssp GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCC
T ss_pred HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCC
Confidence 44443 55555555555544444555555555555555555433332 44445555555555555544555555555555
Q ss_pred EEEcCCCcCcccCCccccCccCCCEEeccCCc
Q 036034 242 ELELGNNLLRGSIPSEIGKLQELYYLDLSHNF 273 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 273 (482)
.|++++|.+++.+|.. ..+++|+.+++++|+
T Consensus 272 ~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 272 SLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred EEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 5555555555444443 445555555555554
No 35
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.7e-33 Score=279.97 Aligned_cols=299 Identities=30% Similarity=0.422 Sum_probs=171.4
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..+++|++|++++|.+++. +. +..+++|++|++++|.+++..+ +.++++|++|++++|.+++. +. +..+++|++
T Consensus 65 ~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~ 138 (466)
T 1o6v_A 65 EYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNR 138 (466)
T ss_dssp GGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSE
T ss_pred hhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCE
Confidence 3467778888888877644 33 7777888888888887775443 77778888888888877743 32 777778888
Q ss_pred EEccCCcccccCCc--------------------cCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc--
Q 036034 82 LDLSGNEIRGSIPS--------------------TFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-- 139 (482)
Q Consensus 82 L~L~~n~~~~~~~~--------------------~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-- 139 (482)
|++++|.+.+ ++. .+..+++|++|++++|.+.+. ..+..+++|++|++++|.+..
T Consensus 139 L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~ 215 (466)
T 1o6v_A 139 LELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDIT 215 (466)
T ss_dssp EEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred EECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccc
Confidence 8888777764 221 133444455555555544421 234455555555555554432
Q ss_pred ---cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCC
Q 036034 140 ---SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRV 216 (482)
Q Consensus 140 ---~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 216 (482)
.+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|
T Consensus 216 ~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 289 (466)
T 1o6v_A 216 PLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL 289 (466)
T ss_dssp GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC
T ss_pred cccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCcc
Confidence 134555555555555432 234455555555555555553322 4555556666666655554322 4555566
Q ss_pred CeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCC
Q 036034 217 EAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMN 296 (482)
Q Consensus 217 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 296 (482)
+.|++++|++.+..+ +..+++|+.|++++|.+++..| +..+++|+.|++++|.+.+. ..+..+++|+.|++++|
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN 363 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCC
Confidence 666666665554322 4555666666666666554433 45556666666666665543 34555666666666666
Q ss_pred ccccccCc-cCCCCCeEeccCCcCcc
Q 036034 297 NLSGSIPK-SVRKVPHLDVLGNNLEG 321 (482)
Q Consensus 297 ~l~~~~p~-~~~~l~~l~~~~n~~~~ 321 (482)
++++..|. .+.++..+++.+|++.+
T Consensus 364 ~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 364 QISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred ccCccchhhcCCCCCEEeccCCcccC
Confidence 66655441 23345556666665554
No 36
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.5e-33 Score=267.16 Aligned_cols=279 Identities=28% Similarity=0.395 Sum_probs=242.1
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..+++|++|++++|.+++. +. +..+++|++|++++|.+++ + ..+.++++|++|++++|.++. ++. +..+++|++
T Consensus 63 ~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~ 136 (347)
T 4fmz_A 63 EYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYS 136 (347)
T ss_dssp GGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCE
T ss_pred hhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccC-chh-hccCCceeE
Confidence 4688999999999999754 44 9999999999999999985 3 469999999999999999985 443 899999999
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-----cccCcCEEEcccCeecc
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-----SLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-----~~~~L~~L~l~~n~~~~ 156 (482)
|++++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.+.. .+++|+.+++++|.+++
T Consensus 137 L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 137 LNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCC
Confidence 999999765444 448999999999999999985433 8899999999999999874 36799999999999986
Q ss_pred cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcC
Q 036034 157 PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMN 236 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 236 (482)
..+ +..+++|+.|++++|.+++. +. +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. +.+..
T Consensus 214 ~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~ 285 (347)
T 4fmz_A 214 ITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNN 285 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred Cch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcC
Confidence 544 78899999999999999854 33 88999999999999999853 5688999999999999999864 56888
Q ss_pred CCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccc
Q 036034 237 CSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 237 ~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
+++|+.|++++|.+++..+..+..+++|+.|++++|++.+..+ +..+++|+.+++++|+++
T Consensus 286 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 286 LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999998888889999999999999999987655 888999999999999875
No 37
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.4e-33 Score=274.39 Aligned_cols=295 Identities=21% Similarity=0.232 Sum_probs=238.6
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
+++++|++|++++|.+++. | .++.+++|++|+|++|.+++. | ++++++|++|++++|.+++. + ++++++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 3578999999999999864 5 689999999999999999964 4 89999999999999999864 3 899999999
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc-----ccccCcCEEEcccCeecc
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN-----ASLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-----~~~~~L~~L~l~~n~~~~ 156 (482)
|++++|.+++ +| ++.+++|++|++++|++++. .++.+++|++|++++|... ..+++|+.|++++|++++
T Consensus 111 L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 111 LNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp EECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC
T ss_pred EECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce
Confidence 9999999986 44 89999999999999999873 3889999999999999433 246889999999999986
Q ss_pred cCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcC
Q 036034 157 PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMN 236 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 236 (482)
+| +..+++|+.|++++|.+++. .++.+++|+.|++++|.+++ +| ++.+++|+.|++++|++++..+..+..
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSK 255 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCC
Confidence 44 78899999999999999864 37889999999999999987 55 788999999999999998764443333
Q ss_pred CC-------CCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccch--------hhcCCCCCCEEECCCCccccc
Q 036034 237 CS-------KLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILS--------ELGAIPSIDTVDLSMNNLSGS 301 (482)
Q Consensus 237 ~~-------~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~--------~~~~~~~L~~l~l~~n~l~~~ 301 (482)
+. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|+.|++++|++++.
T Consensus 256 L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 256 LTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL 333 (457)
T ss_dssp CCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC
T ss_pred CCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc
Confidence 32 44555555555554444 45678888999988886665543 245567888888888888885
Q ss_pred cCccCCCCCeEeccCCcCcc
Q 036034 302 IPKSVRKVPHLDVLGNNLEG 321 (482)
Q Consensus 302 ~p~~~~~l~~l~~~~n~~~~ 321 (482)
.-..+.+++.+++++|.+.+
T Consensus 334 ~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 334 DVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCTTCTTCSEEECCSSCCCB
T ss_pred ccccCCcCcEEECCCCCCCC
Confidence 44445668888888888876
No 38
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.1e-32 Score=261.14 Aligned_cols=287 Identities=21% Similarity=0.268 Sum_probs=192.9
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|.+++..|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 6788888888775 4565543 678888888888887777778888888888888888887667888888888888888
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL 165 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l 165 (482)
+|.++ .+|..+. ++|++|++++|.+.+..+..+.++++|++|++++|.+.. .+..+..+..+
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------~~~~~~~~~~l 170 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS---------------SGIENGAFQGM 170 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG---------------GGBCTTGGGGC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc---------------cCcChhhccCC
Confidence 88887 4555554 678888888888876666667778888888777776532 12344556666
Q ss_pred CCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEc
Q 036034 166 NRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELEL 245 (482)
Q Consensus 166 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 245 (482)
++|+.|++++|.++ .+|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++
T Consensus 171 ~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 247 (330)
T 1xku_A 171 KKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247 (330)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred CCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEEC
Confidence 66777777766665 3444333 56677777777666665666666677777777777666655556666677777777
Q ss_pred CCCcCcccCCccccCccCCCEEeccCCcCccccchhhcC------CCCCCEEECCCCcccc--ccCccCC---CCCeEec
Q 036034 246 GNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGA------IPSIDTVDLSMNNLSG--SIPKSVR---KVPHLDV 314 (482)
Q Consensus 246 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~l~l~~n~l~~--~~p~~~~---~l~~l~~ 314 (482)
++|.++ .+|..+..+++|++|++++|++++..+..+.. .+.++.+++++|++.. ..|..+. .+..+++
T Consensus 248 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L 326 (330)
T 1xku_A 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 326 (330)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC
T ss_pred CCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEe
Confidence 777666 56666666677777777777766554444432 2566677777776643 2233332 3445555
Q ss_pred cCC
Q 036034 315 LGN 317 (482)
Q Consensus 315 ~~n 317 (482)
++|
T Consensus 327 ~~N 329 (330)
T 1xku_A 327 GNY 329 (330)
T ss_dssp ---
T ss_pred ccc
Confidence 554
No 39
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-32 Score=262.98 Aligned_cols=286 Identities=22% Similarity=0.251 Sum_probs=188.6
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+++.++++++.++ .+|..+ .++|++|+|++|.+++..|..|.++++|++|++++|.+++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777777777775 456554 3577777777777776666777777777777777777776667777777777777777
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL 165 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l 165 (482)
+|.++ .+|..+. ++|++|++++|++....+..+.++++|++|++++|.+.. .+..+..+..+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~---------------~~~~~~~~~~l 172 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN---------------SGFEPGAFDGL 172 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG---------------GGSCTTSSCSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc---------------CCCCcccccCC
Confidence 77776 4555444 677777777777775555567777777777776665532 12344555555
Q ss_pred CCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEc
Q 036034 166 NRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELEL 245 (482)
Q Consensus 166 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 245 (482)
+|+.|++++|.+++ +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++
T Consensus 173 -~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 173 -KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp -CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred -ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 67777777777663 444433 56777777777776666666777777777777777776665556667777777777
Q ss_pred CCCcCcccCCccccCccCCCEEeccCCcCccccchhhcC------CCCCCEEECCCCccc--cccCccC---CCCCeEec
Q 036034 246 GNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGA------IPSIDTVDLSMNNLS--GSIPKSV---RKVPHLDV 314 (482)
Q Consensus 246 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~l~l~~n~l~--~~~p~~~---~~l~~l~~ 314 (482)
++|.++ .+|..+..+++|+.|++++|++++..+..+.. .+.|+.+++++|++. +..|..+ ..+..+++
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l 327 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQF 327 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhc
Confidence 777776 56666777777777777777776555544433 355677777777765 3334333 33555565
Q ss_pred cCC
Q 036034 315 LGN 317 (482)
Q Consensus 315 ~~n 317 (482)
.+|
T Consensus 328 ~~n 330 (332)
T 2ft3_A 328 GNY 330 (332)
T ss_dssp ---
T ss_pred ccc
Confidence 554
No 40
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.5e-32 Score=272.92 Aligned_cols=281 Identities=30% Similarity=0.432 Sum_probs=239.3
Q ss_pred CCCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccC----------
Q 036034 1 MGRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIP---------- 70 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---------- 70 (482)
++++++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +.++++|++|++++|.+++...
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L 161 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQL 161 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEE
T ss_pred hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEe
Confidence 3578899999999998875433 8889999999999998885533 8889999999999888764211
Q ss_pred ---------ccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc--
Q 036034 71 ---------LEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-- 139 (482)
Q Consensus 71 ---------~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-- 139 (482)
..+.++++|++|++++|.+.+. ..+..+++|++|++++|.+.+..| ++.+++|++|++++|.+..
T Consensus 162 ~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 237 (466)
T 1o6v_A 162 SFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG 237 (466)
T ss_dssp EEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred ecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccch
Confidence 1266788999999999998743 458899999999999999986544 7889999999999998874
Q ss_pred ---cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCC
Q 036034 140 ---SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRV 216 (482)
Q Consensus 140 ---~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 216 (482)
.+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+.. . +..+++|+.|++++|.+.+..+ +..+++|
T Consensus 238 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 311 (466)
T 1o6v_A 238 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS-P-LAGLTALTNLELNENQLEDISP--ISNLKNL 311 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG-G-GTTCTTCSEEECCSSCCSCCGG--GGGCTTC
T ss_pred hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccc-c-ccCCCccCeEEcCCCcccCchh--hcCCCCC
Confidence 47899999999999986654 888999999999999998643 3 8889999999999999986544 7899999
Q ss_pred CeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCC
Q 036034 217 EAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMN 296 (482)
Q Consensus 217 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 296 (482)
+.|++++|++.+..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++.+..| +..+++|+.+++++|
T Consensus 312 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 312 TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred CEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 999999999987655 78899999999999999864 468899999999999999998766 889999999999999
Q ss_pred ccccc
Q 036034 297 NLSGS 301 (482)
Q Consensus 297 ~l~~~ 301 (482)
++++.
T Consensus 386 ~~~~~ 390 (466)
T 1o6v_A 386 AWTNA 390 (466)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 99974
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.1e-31 Score=279.16 Aligned_cols=302 Identities=23% Similarity=0.242 Sum_probs=247.9
Q ss_pred CCCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCC
Q 036034 1 MGRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQ 80 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 80 (482)
|.++++|++|||++|.+++..++.|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|+
T Consensus 72 f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~ 151 (635)
T 4g8a_A 72 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 151 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred HhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccC
Confidence 46799999999999999887788899999999999999999987788899999999999999999977677899999999
Q ss_pred EEEccCCcccc-cCCccCcCCCCCCEEeCcCCcccccCCcccc-------------------------------------
Q 036034 81 VLDLSGNEIRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLG------------------------------------- 122 (482)
Q Consensus 81 ~L~L~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~------------------------------------- 122 (482)
+|+|++|.++. ..|..++.+++|++|++++|++.+..+..+.
T Consensus 152 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l 231 (635)
T 4g8a_A 152 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTL 231 (635)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred eeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhh
Confidence 99999999975 4688899999999999999977543222110
Q ss_pred --------------------------------------------------------------------------------
Q 036034 123 -------------------------------------------------------------------------------- 122 (482)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (482)
T Consensus 232 ~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l 311 (635)
T 4g8a_A 232 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSF 311 (635)
T ss_dssp ESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEE
T ss_pred hcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccc
Confidence
Q ss_pred --------------CCCCCCEEEcccccCcc--------------------------cccCcCEEEcccCee--------
Q 036034 123 --------------HLTQLTTLNMRSNLINA--------------------------SLVNLTSLSLHYNNL-------- 154 (482)
Q Consensus 123 --------------~l~~L~~L~l~~n~i~~--------------------------~~~~L~~L~l~~n~~-------- 154 (482)
...+|+.|++.+|.+.. .+++|+.+++++|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~ 391 (635)
T 4g8a_A 312 SLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ 391 (635)
T ss_dssp EEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCH
T ss_pred cccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccccccc
Confidence 11123334333332210 123445555544433
Q ss_pred -----------------------------------------ccc-CCccCcCCCCCCEEEccCCccccCCCcCCcCCCCC
Q 036034 155 -----------------------------------------TGP-IPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQL 192 (482)
Q Consensus 155 -----------------------------------------~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 192 (482)
... .+..+..+.+++.++++.|.+.+..+..+..++.|
T Consensus 392 ~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L 471 (635)
T 4g8a_A 392 SDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 471 (635)
T ss_dssp HHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred chhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh
Confidence 211 12345667788899999999998888889999999
Q ss_pred CEEeccCCccc-cccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccC
Q 036034 193 NTLNMYSNQIN-GSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSH 271 (482)
Q Consensus 193 ~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 271 (482)
+.|++++|.+. +..|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 472 ~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 551 (635)
T 4g8a_A 472 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 551 (635)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTT
T ss_pred hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCC
Confidence 99999999754 45788899999999999999999998899999999999999999999988888999999999999999
Q ss_pred CcCccccchhhcCC-CCCCEEECCCCcccccc
Q 036034 272 NFINGKILSELGAI-PSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 272 n~l~~~~~~~~~~~-~~L~~l~l~~n~l~~~~ 302 (482)
|++++..+..+..+ ++|+.|++++|++.+..
T Consensus 552 N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 552 NHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp SCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999889887 58999999999998754
No 42
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.4e-32 Score=256.89 Aligned_cols=269 Identities=21% Similarity=0.240 Sum_probs=213.9
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+++++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57999999999998877778999999999999999999888999999999999999999998 5666654 79999999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccc--cCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVG--PIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
++|.+++..+..+..+++|+.|++++|.+.. ..+..+.++++|++|++++|.+.. +|..+
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~------------------l~~~~ 190 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT------------------IPQGL 190 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS------------------CCSSC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc------------------CCccc
Confidence 9999998888889999999999999999964 667788899999999888877642 33322
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCE
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLME 242 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 242 (482)
. ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.++ .+|..+..+++|++
T Consensus 191 ~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~ 267 (330)
T 1xku_A 191 P--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQV 267 (330)
T ss_dssp C--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCE
T ss_pred c--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCE
Confidence 2 56777777777777666677777777777777777777666667777777888888887777 56677777788888
Q ss_pred EEcCCCcCcccCCccccC------ccCCCEEeccCCcCcc--ccchhhcCCCCCCEEECCCCc
Q 036034 243 LELGNNLLRGSIPSEIGK------LQELYYLDLSHNFING--KILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 243 L~l~~n~l~~~~~~~~~~------~~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~l~l~~n~ 297 (482)
|++++|.+++..+..+.. .+.++.+++++|++.. ..+..+..++.++.+++++|+
T Consensus 268 L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 268 VYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp EECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred EECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 888888877655555532 3677888888888763 445667778888888888874
No 43
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8e-32 Score=267.33 Aligned_cols=299 Identities=22% Similarity=0.243 Sum_probs=243.3
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
+++++|++|++++|.+++. | ++.+++|++|++++|.+++. + ++++++|++|++++|++++ +| ++.+++|++
T Consensus 61 ~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~ 131 (457)
T 3bz5_A 61 EKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTY 131 (457)
T ss_dssp GGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCE
T ss_pred cccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCE
Confidence 5689999999999999864 4 88999999999999999964 3 8999999999999999986 44 899999999
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc----cccCcCEEEcccCeeccc
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA----SLVNLTSLSLHYNNLTGP 157 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~L~~L~l~~n~~~~~ 157 (482)
|++++|.+++. + ++.+++|++|++++|+..+.+ .+..+++|++|++++|.++. .+++|+.|++++|.+++.
T Consensus 132 L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 132 LNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp EECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCC
T ss_pred EECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCee
Confidence 99999999863 3 889999999999999655555 58899999999999999875 467899999999999975
Q ss_pred CCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCC-------CCCeeeccCCcccCCC
Q 036034 158 IPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLK-------RVEAVKLYDNKLDGPI 230 (482)
Q Consensus 158 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------~L~~L~l~~n~l~~~~ 230 (482)
.++.+++|+.|++++|++++ +| +..+++|+.|++++|.+++..+..+..+. +|+.+++++|.+.+.+
T Consensus 207 ---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 207 ---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYF 280 (457)
T ss_dssp ---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred ---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcc
Confidence 38889999999999999986 55 78899999999999999976554444443 4566666677666555
Q ss_pred CccCcCCCCCCEEEcCCCcCcccCCc--------cccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccccc
Q 036034 231 PPELMNCSKLMELELGNNLLRGSIPS--------EIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 231 ~~~~~~~~~L~~L~l~~n~l~~~~~~--------~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 302 (482)
| +..+++|+.|++++|...+.+|. .++.+++|+.|++++|++++. .+..+++|+.|++++|++++..
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~l~ 355 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQDFS 355 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCBCT
T ss_pred c--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCCcc
Confidence 5 46789999999999987665543 256678999999999999974 3888999999999999998721
Q ss_pred Cc--------------cCCCCCeEeccCCcCcccCCC
Q 036034 303 PK--------------SVRKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 303 p~--------------~~~~l~~l~~~~n~~~~~~~~ 325 (482)
.- .+..++.++++.|.++|.+|.
T Consensus 356 ~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 356 SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCT
T ss_pred ccccccccCCcEEecceeeecCccccccCcEEEEcCh
Confidence 10 012245566666777766654
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8e-32 Score=257.19 Aligned_cols=269 Identities=20% Similarity=0.223 Sum_probs=214.9
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLD 83 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 83 (482)
.+++++|++++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|++++|.++ .+|..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 357999999999998877889999999999999999999888999999999999999999998 5666655 8999999
Q ss_pred ccCCcccccCCccCcCCCCCCEEeCcCCcccc--cCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCcc
Q 036034 84 LSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVG--PIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 84 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~ 161 (482)
+++|.++...+..+..+++|++|++++|.+.. ..+..+..+ +|++|++++|.+.. +|..
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~------------------l~~~ 190 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG------------------IPKD 190 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS------------------CCSS
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc------------------cCcc
Confidence 99999997777789999999999999999963 566777776 77777777666542 3333
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
+. ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|+
T Consensus 191 ~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 191 LP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ 267 (332)
T ss_dssp SC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCC
T ss_pred cc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCC
Confidence 32 57778888888887666677778888888888888887766667778888888888888877 6777777888888
Q ss_pred EEEcCCCcCcccCCccccC------ccCCCEEeccCCcCc--cccchhhcCCCCCCEEECCCCc
Q 036034 242 ELELGNNLLRGSIPSEIGK------LQELYYLDLSHNFIN--GKILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~~~~~------~~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~l~l~~n~ 297 (482)
.|++++|.+++..+..+.. .+.|+.|++++|++. +..+..+..++.|+.+++++|.
T Consensus 268 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp EEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred EEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 8888888887665555543 367888888888876 4556677888888888888774
No 45
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.1e-31 Score=248.75 Aligned_cols=285 Identities=20% Similarity=0.226 Sum_probs=210.0
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceec--cCccccCCCCCCEEEc
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVS--IPLEIGNLNFLQVLDL 84 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L 84 (482)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|++++|.++.. .+..+..+++|++|++
T Consensus 9 ~~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CCEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 367888888885 566654 36899999999999865556688999999999999998743 3566777899999999
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLG 163 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~ 163 (482)
++|.+. .+|..+..+++|++|++++|++.+..+ ..+..+++|++|++++|. +.+..+..+.
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~-----------------l~~~~~~~~~ 147 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH-----------------TRVAFNGIFN 147 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC-----------------CEECSTTTTT
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc-----------------CCccchhhcc
Confidence 999887 467778889999999999998876544 456677776666655544 4445666677
Q ss_pred CCCCCCEEEccCCcccc-CCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCE
Q 036034 164 HLNRIRILDLSENKLVG-PIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLME 242 (482)
Q Consensus 164 ~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 242 (482)
.+++|+.|++++|.+.+ ..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 78888888888888875 46777788888888888888888777777778888888888888887666666777888888
Q ss_pred EEcCCCcCcccCCccccCcc-CCCEEeccCCcCccccch--hhcCCCCCCEEECCCCccccccCccCCCCCeE
Q 036034 243 LELGNNLLRGSIPSEIGKLQ-ELYYLDLSHNFINGKILS--ELGAIPSIDTVDLSMNNLSGSIPKSVRKVPHL 312 (482)
Q Consensus 243 L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~--~~~~~~~L~~l~l~~n~l~~~~p~~~~~l~~l 312 (482)
|++++|.+++..|..+..++ +|++|++++|++.+.... -...+...+.+.+..+.+.+..|..+.+.+..
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~~~ 300 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVL 300 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCBGG
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCceee
Confidence 88888888877777777774 788888888887754321 11223334444555666777777666554433
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=2e-30 Score=257.10 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=152.2
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCC-------------CeeecccCcceecc
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQL-------------TTLAIASNHINVSI 69 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~l~~n~l~~~~ 69 (482)
+.++|++|++++|.+ +.+|+.++.+++|++|++++|.+.+.+|.+++++++| ++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 346778888888887 6778888888888888888888887788777776653 666666666553 2
Q ss_pred Cccc-----------------cCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEc
Q 036034 70 PLEI-----------------GNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNM 132 (482)
Q Consensus 70 ~~~~-----------------~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 132 (482)
|... ..+++|++|++++|.+++ ++.. .++|++|++++|++++ +| .++++++|++|++
T Consensus 87 p~~~~~L~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 87 PELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp CSCCTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCcCCCCEEEccCCcCCccccccCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 3211 012344555555554442 2211 1578888888888885 66 5888999999999
Q ss_pred ccccCcc---cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCcc
Q 036034 133 RSNLINA---SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLE 209 (482)
Q Consensus 133 ~~n~i~~---~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 209 (482)
++|.+++ ...+|+.|++++|.+++ +| .++.+++|+.|++++|.+++ +|... ++|++|++++|.+. .+| .
T Consensus 161 ~~N~l~~lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~ 232 (454)
T 1jl5_A 161 DNNSLKKLPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-E 232 (454)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-C
T ss_pred CCCcCcccCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-c
Confidence 9998874 34689999999998886 55 58888899999999988874 44432 47888888888877 566 4
Q ss_pred CcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 210 IGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 210 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
++.+++|+.|++++|++.+ +|.. +++|+.|++++|.+++ +|.. +++|+.|++++|.+.+
T Consensus 233 ~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 233 LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 7788888888888888774 3332 3566677777666664 3332 2455566666665554
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=2.4e-29 Score=249.34 Aligned_cols=277 Identities=23% Similarity=0.333 Sum_probs=193.8
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++|++|++++|.+++ +|+. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .++++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 456666666666654 4432 3667777777776663 2221 2678888888888885 66 5888888888888
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc---cccCcCEEEcccCeecccCCcc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA---SLVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~---~~~~L~~L~l~~n~~~~~~~~~ 161 (482)
++|.+++ +|..+ .+|++|++++|++.+ +| .++++++|++|++++|.+.+ ..++|+.|++++|.++ .+| .
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~-~lp-~ 232 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE-ELP-E 232 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS-SCC-C
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCC-ccc-c
Confidence 8888874 55433 588888888888885 55 68889999999999988774 3458899999999888 566 4
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
++.+++|+.|++++|.+.+ +|.. +++|+.|++++|.+++ +|.. .++|+.|++++|.+++. +. -.++|+
T Consensus 233 ~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~---~~~~L~ 300 (454)
T 1jl5_A 233 LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SE---LPPNLY 300 (454)
T ss_dssp CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SC---CCTTCC
T ss_pred cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cC---cCCcCC
Confidence 8888999999999998874 4543 3688888998888875 4443 36788888888888752 11 114667
Q ss_pred EEEcCCCcCcccCCccccCc-cCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCCCCCeEeccCCcCc
Q 036034 242 ELELGNNLLRGSIPSEIGKL-QELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVRKVPHLDVLGNNLE 320 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~~l~~l~~~~n~~~ 320 (482)
.|++++|.+++ ++ .+ ++|+.|++++|++.+ +|.. +++|+.+++++|.++. +|..+.+++.+++++|.+.
T Consensus 301 ~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 301 YLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPELPQNLKQLHVEYNPLR 370 (454)
T ss_dssp EEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred EEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccchhhhccEEECCCCCCC
Confidence 77777776663 11 22 467777777777764 3322 4667777777777764 4445556777777777776
Q ss_pred c
Q 036034 321 G 321 (482)
Q Consensus 321 ~ 321 (482)
+
T Consensus 371 ~ 371 (454)
T 1jl5_A 371 E 371 (454)
T ss_dssp S
T ss_pred c
Confidence 6
No 48
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.2e-30 Score=245.05 Aligned_cols=234 Identities=21% Similarity=0.340 Sum_probs=157.2
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDL 108 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 108 (482)
.+++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45566666666655 55555555666666666666665 55555666666666666666665 45556666666666666
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcC
Q 036034 109 SQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGH 188 (482)
Q Consensus 109 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 188 (482)
++|++.+.+|..+........ -..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+. .+|..+..
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~--------~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~ 227 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGE--------HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHH 227 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCC--------EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGG
T ss_pred CCCCCccccChhHhhccchhh--------hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhcc
Confidence 665555555554433000000 012233333444444444 56677777888888888888887 46666778
Q ss_pred CCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEe
Q 036034 189 LTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 189 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
+++|+.|++++|.+.+.+|..++.+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..++++++|+.++
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~ 307 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIIL 307 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEE
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEe
Confidence 88888888888888878888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCcCc
Q 036034 269 LSHNFIN 275 (482)
Q Consensus 269 l~~n~l~ 275 (482)
+..+.+.
T Consensus 308 l~~~~~~ 314 (328)
T 4fcg_A 308 VPPHLQA 314 (328)
T ss_dssp CCGGGSC
T ss_pred CCHHHHH
Confidence 8877654
No 49
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=251.12 Aligned_cols=280 Identities=23% Similarity=0.195 Sum_probs=193.2
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
+.....+.+++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..|..|.++++|++|++
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 34455777777775 4566553 57888888888888766667888888888888888888766777888888888888
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCc
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLG 163 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~ 163 (482)
++|.+++..+..++.+++|++|++++|++....+ ..+.++++|++|++++|. .+++..+..+.
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~----------------~~~~~~~~~~~ 171 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD----------------TFTKIQRKDFA 171 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS----------------SCCEECTTTTT
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc----------------cccccCHHHcc
Confidence 8888875545557788888888888888774332 357777777777766552 12333455667
Q ss_pred CCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCc---CCCCC
Q 036034 164 HLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELM---NCSKL 240 (482)
Q Consensus 164 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~~~~L 240 (482)
.+++|+.|++++|.+.+..|..+..+++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+. ..+.+
T Consensus 172 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l 251 (353)
T 2z80_A 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLI 251 (353)
T ss_dssp TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCC
T ss_pred CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchh
Confidence 777777777777777766677777777777777777776533323334567777777777777654443322 34567
Q ss_pred CEEEcCCCcCcc----cCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 241 MELELGNNLLRG----SIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 241 ~~L~l~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
+.++++++.+.+ .+|..+..+++|+.|++++|++.......+..+++|+++++++|++.+..|
T Consensus 252 ~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 252 KKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 777777777665 355666777788888888887774333335777788888888887776554
No 50
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.2e-30 Score=241.83 Aligned_cols=273 Identities=23% Similarity=0.241 Sum_probs=225.8
Q ss_pred CEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCccccc--CCccCcCCCCCCEEeCc
Q 036034 32 ENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGS--IPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 32 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~--~~~~l~~l~~L~~L~L~ 109 (482)
+.++++++.++ .+|..+. ++|++|++++|+++...+..|.++++|++|+|++|.++.. .+..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888888 6666543 6899999999999854445578999999999999998733 36777789999999999
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCC-ccCcCCCCCCEEEccCCccccCCCcCCcC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIP-STLGHLNRIRILDLSENKLVGPIPSSVGH 188 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 188 (482)
+|.+. .+|..+..+++|++|++++|.+ ++..+ ..+..+++|++|++++|.+.+..+..+..
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l-----------------~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNL-----------------KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEE-----------------ESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcc-----------------cccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 99988 4666677777777777666544 43333 57888999999999999999888888999
Q ss_pred CCCCCEEeccCCcccc-ccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEE
Q 036034 189 LTQLNTLNMYSNQING-SIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYL 267 (482)
Q Consensus 189 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 267 (482)
+++|++|++++|.+.+ ..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 9999999999999987 578899999999999999999998888899999999999999999998777788999999999
Q ss_pred eccCCcCccccchhhcCCC-CCCEEECCCCccccccC-----ccCCCCCeEeccCCcCcccCCC
Q 036034 268 DLSHNFINGKILSELGAIP-SIDTVDLSMNNLSGSIP-----KSVRKVPHLDVLGNNLEGEIPS 325 (482)
Q Consensus 268 ~l~~n~l~~~~~~~~~~~~-~L~~l~l~~n~l~~~~p-----~~~~~l~~l~~~~n~~~~~~~~ 325 (482)
++++|++.+..+..+..++ +|+.+++++|++.+..+ .++...+.+.+..+.+.+..|.
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 9999999998888888885 99999999999987543 3344444445555555555443
No 51
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.9e-30 Score=241.97 Aligned_cols=233 Identities=21% Similarity=0.271 Sum_probs=156.8
Q ss_pred CCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEE
Q 036034 52 LTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLN 131 (482)
Q Consensus 52 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 131 (482)
.++++.|++++|.++ .+|..+..+++|++|+|++|.++ .+|..++.+++|++|++++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777776 56666666777777777777776 66777777777777777777776 5676777777777777
Q ss_pred cccccCccccc-CcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccC
Q 036034 132 MRSNLINASLV-NLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEI 210 (482)
Q Consensus 132 l~~n~i~~~~~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 210 (482)
+++|.+.+..+ .+... ..+..+..+++|+.|++++|.++ .+|..++.+++|+.|++++|.+++ +|..+
T Consensus 157 L~~n~~~~~~p~~~~~~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l 225 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI 225 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG
T ss_pred CCCCCCccccChhHhhc---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh
Confidence 77655433221 11111 11122444677777777777776 566667777777777777777763 55566
Q ss_pred cCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCE
Q 036034 211 GNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDT 290 (482)
Q Consensus 211 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 290 (482)
..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..+..+++|++|++++|++.+.+|..+..+++|+.
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~ 305 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCE
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceE
Confidence 77777777777777777777777777777777777777776677777777777777777777777777777777777777
Q ss_pred EECCCCcc
Q 036034 291 VDLSMNNL 298 (482)
Q Consensus 291 l~l~~n~l 298 (482)
+++..+.+
T Consensus 306 l~l~~~~~ 313 (328)
T 4fcg_A 306 ILVPPHLQ 313 (328)
T ss_dssp EECCGGGS
T ss_pred EeCCHHHH
Confidence 77765543
No 52
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.6e-32 Score=274.46 Aligned_cols=320 Identities=21% Similarity=0.183 Sum_probs=253.6
Q ss_pred CCCCCCEEeccCCcccc----CCCcccCCCCCCCEEeCcCCcccccCCccc-cCCC----CCCeeecccCccee----cc
Q 036034 3 RLRNLVHLDLSDNYLWG----YIPPTLGRLSKLENLHLSSNSLVGNIPSTL-GHLT----QLTTLAIASNHINV----SI 69 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~----~L~~L~l~~n~l~~----~~ 69 (482)
.+++|++|++++|.+++ .++..+..+++|++|+|++|.+.+..+..+ ..++ +|++|++++|.++. .+
T Consensus 26 ~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l 105 (461)
T 1z7x_W 26 LLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 105 (461)
T ss_dssp HHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred hcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHH
Confidence 46899999999999874 356778889999999999999886544333 3355 79999999999984 45
Q ss_pred CccccCCCCCCEEEccCCcccccCCccCc-----CCCCCCEEeCcCCcccccC----CccccCCCCCCEEEcccccCccc
Q 036034 70 PLEIGNLNFLQVLDLSGNEIRGSIPSTFG-----HLKRLKSLDLSQNKLVGPI----PSSLGHLTQLTTLNMRSNLINAS 140 (482)
Q Consensus 70 ~~~~~~l~~L~~L~L~~n~~~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~l~~n~i~~~ 140 (482)
+..+..+++|++|++++|.+++..+..+. ..++|++|++++|++++.. +..+..+++|++|++++|.+...
T Consensus 106 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEA 185 (461)
T ss_dssp HHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchH
Confidence 88899999999999999998765444332 3568999999999998643 55677789999999999998642
Q ss_pred ------------ccCcCEEEcccCeeccc----CCccCcCCCCCCEEEccCCccccCC-----CcCCcCCCCCCEEeccC
Q 036034 141 ------------LVNLTSLSLHYNNLTGP----IPSTLGHLNRIRILDLSENKLVGPI-----PSSVGHLTQLNTLNMYS 199 (482)
Q Consensus 141 ------------~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~ 199 (482)
.++|+.|++++|.+++. ++..+..+++|+.|++++|.+.+.. +..+..+++|++|++++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 34999999999999863 5677778899999999999987532 22334578999999999
Q ss_pred Cccccc----cCccCcCCCCCCeeeccCCcccCCCCccCc-----CCCCCCEEEcCCCcCccc----CCccccCccCCCE
Q 036034 200 NQINGS----IPLEIGNLKRVEAVKLYDNKLDGPIPPELM-----NCSKLMELELGNNLLRGS----IPSEIGKLQELYY 266 (482)
Q Consensus 200 n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~ 266 (482)
|.+++. ++..+..+++|+.|++++|.+++..+..+. ..++|+.|++++|.+++. ++..+..+++|++
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 345 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLE 345 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCE
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccE
Confidence 999864 566677789999999999998754333333 236999999999998865 4556677899999
Q ss_pred EeccCCcCccccchhhcC-----CCCCCEEECCCCcccc----ccCcc---CCCCCeEeccCCcCccc
Q 036034 267 LDLSHNFINGKILSELGA-----IPSIDTVDLSMNNLSG----SIPKS---VRKVPHLDVLGNNLEGE 322 (482)
Q Consensus 267 L~l~~n~l~~~~~~~~~~-----~~~L~~l~l~~n~l~~----~~p~~---~~~l~~l~~~~n~~~~~ 322 (482)
|++++|.+.+..+..+.. .++|+.|++++|.+++ .+|.. ..++..+++++|++.+.
T Consensus 346 L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 346 LQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred EEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 999999998766555442 6799999999999986 55554 46789999999988753
No 53
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.7e-32 Score=274.17 Aligned_cols=318 Identities=19% Similarity=0.138 Sum_probs=251.6
Q ss_pred CCCCCEEeccCCccccCCCcc-cCCCCCCCEEeCcCCcccc----cCCccccCCCCCCeeecccCcceeccCccc-cCCC
Q 036034 4 LRNLVHLDLSDNYLWGYIPPT-LGRLSKLENLHLSSNSLVG----NIPSTLGHLTQLTTLAIASNHINVSIPLEI-GNLN 77 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~ 77 (482)
+++|++|||++|.+++..... +..+++|++|+|++|++++ .++..+..+++|++|++++|.++...+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 467899999999987543333 7788999999999999885 356778889999999999999976444333 3344
Q ss_pred ----CCCEEEccCCcccc----cCCccCcCCCCCCEEeCcCCcccccCCcccc-----CCCCCCEEEcccccCccc----
Q 036034 78 ----FLQVLDLSGNEIRG----SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLG-----HLTQLTTLNMRSNLINAS---- 140 (482)
Q Consensus 78 ----~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~l~~n~i~~~---- 140 (482)
+|++|+|++|.++. .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|.++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999984 5688899999999999999998765444433 356899999999998752
Q ss_pred -------ccCcCEEEcccCeecccCCccCc-----CCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCcccc
Q 036034 141 -------LVNLTSLSLHYNNLTGPIPSTLG-----HLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQING 204 (482)
Q Consensus 141 -------~~~L~~L~l~~n~~~~~~~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 204 (482)
+++|+.|++++|.+++..+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 58999999999998765443332 356899999999999863 46667788999999999999876
Q ss_pred cc-----CccCcCCCCCCeeeccCCcccCC----CCccCcCCCCCCEEEcCCCcCcccCCccccC-----ccCCCEEecc
Q 036034 205 SI-----PLEIGNLKRVEAVKLYDNKLDGP----IPPELMNCSKLMELELGNNLLRGSIPSEIGK-----LQELYYLDLS 270 (482)
Q Consensus 205 ~~-----~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-----~~~L~~L~l~ 270 (482)
.. +.....+++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 43 22334688999999999998864 5666777999999999999987654444432 3699999999
Q ss_pred CCcCccc----cchhhcCCCCCCEEECCCCccccccCcc--------CCCCCeEeccCCcCcc
Q 036034 271 HNFINGK----ILSELGAIPSIDTVDLSMNNLSGSIPKS--------VRKVPHLDVLGNNLEG 321 (482)
Q Consensus 271 ~n~l~~~----~~~~~~~~~~L~~l~l~~n~l~~~~p~~--------~~~l~~l~~~~n~~~~ 321 (482)
+|.+.+. .+..+..+++|+.|++++|.+.+..+.. ...++.+++++|.+.+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 9999876 3455667899999999999998754432 3479999999998874
No 54
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.5e-28 Score=244.53 Aligned_cols=249 Identities=20% Similarity=0.200 Sum_probs=169.2
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
.+.++.+++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 356666666664 4555443 5677777777777766677777777777777777777766666777777777777777
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
|.++...+..+..+++|++|+|++|++....+..+.++++|++|++++|+. +....+..+..++
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~----------------l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK----------------LEYISEGAFEGLF 196 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT----------------CCEECTTTTTTCT
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCC----------------ccccChhhccCCC
Confidence 777755556677777777777777777655555666667776666665321 2222234566777
Q ss_pred CCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcC
Q 036034 167 RIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELG 246 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 246 (482)
+|+.|++++|.+++ +| .+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.|+|+
T Consensus 197 ~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 197 NLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp TCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 77777777777763 33 46667777777777777776667777777777777777777776666667777777777777
Q ss_pred CCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 247 NNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 247 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+|.+++..+..+..+++|+.|++++|++..
T Consensus 275 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 275 HNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp SSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 777775555666677777777777776653
No 55
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.8e-28 Score=243.17 Aligned_cols=249 Identities=21% Similarity=0.234 Sum_probs=170.3
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
.+.++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456666666664 4555443 5677777777777766667777777777777777777766666677777777777777
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
|.++...+..|..+++|++|++++|++....+..|.++++|++|++++|+. +....+..+..++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~----------------l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR----------------LSYISEGAFEGLS 185 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT----------------CCEECTTTTTTCS
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCC----------------cceeCcchhhccc
Confidence 777655555677777777777777777655555666666666666655321 2222334566777
Q ss_pred CCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcC
Q 036034 167 RIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELG 246 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 246 (482)
+|+.|++++|.++ .+| .+..+++|+.|++++|.+++..|..+..+++|+.|++++|++.+..+..+..+++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 7777777777776 344 36677777777777777776667777777777777777777776666677777777777777
Q ss_pred CCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 247 NNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 247 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+|.+++..+..+..+++|+.|++++|++..
T Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 264 HNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 777776666666777777777777777653
No 56
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3e-29 Score=234.02 Aligned_cols=257 Identities=23% Similarity=0.239 Sum_probs=140.2
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|++++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666664 344433 356666666666666555556666666666666666666555566666666666666666
Q ss_pred c-ccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 88 E-IRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 88 ~-~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
. +....|..+..+++|++|++++|++.+..|..+.++++|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L--------------------------------------- 131 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL--------------------------------------- 131 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC---------------------------------------
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCC---------------------------------------
Confidence 5 554445556666666666666666554444444444444
Q ss_pred CCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcC
Q 036034 167 RIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELG 246 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 246 (482)
++|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..|..+..+++|+.|+++
T Consensus 132 --~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 132 --QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp --CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred --CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 444444444443333334444555555555555443333344455555555555555555455555556666666666
Q ss_pred CCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCCCC
Q 036034 247 NNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVRKV 309 (482)
Q Consensus 247 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~~l 309 (482)
+|.+++..+..+..+++|+.|++++|++........ ....++.+..+.+.+.+..|..+.+.
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~-~~~~l~~~~~~~~~~~c~~p~~l~g~ 271 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARP-LWAWLQKFRGSSSEVPCSLPQRLAGR 271 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHH-HHHHHHHCCSEECCCBEEESGGGTTC
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHH-HHHHHHhcccccCccccCCchHhCCc
Confidence 666665444455666666666666666654332210 00112333455666677777665553
No 57
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.4e-29 Score=233.71 Aligned_cols=208 Identities=22% Similarity=0.231 Sum_probs=166.0
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCc-ceeccCccccCCCCCCEE
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNH-INVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L 82 (482)
.+++++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4689999999999988777889999999999999999998889999999999999999997 876668899999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
++++|.+++..|..+..+++|++|++++|++.+..+..+..+++|++|++++|.+ ++..+..+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-----------------~~~~~~~~ 173 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-----------------SSVPERAF 173 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------CEECTTTT
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc-----------------cccCHHHh
Confidence 9999999988889999999999999999999876666677777777776665544 32334456
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG 228 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 228 (482)
..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++..
T Consensus 174 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 174 RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 667777777777777776666667777777777777776665444445556666666666665543
No 58
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4e-28 Score=241.50 Aligned_cols=251 Identities=22% Similarity=0.237 Sum_probs=216.8
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCc
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~ 109 (482)
....++.++..++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4578888888888 6676554 689999999999998888899999999999999999998888999999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCC-ccccCCCcCCcC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSEN-KLVGPIPSSVGH 188 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~ 188 (482)
+|+++...+..+..+++|++|++++|.+ +...+..+..+++|+.|++++| .+....+..+..
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l-----------------~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~ 194 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPI-----------------ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG 194 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCC-----------------CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCc-----------------ceeCHhHHhcCCcccEEeCCCCCCccccChhhccC
Confidence 9999976667788888888887776655 3344567889999999999985 444334457889
Q ss_pred CCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEe
Q 036034 189 LTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 189 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
+++|+.|++++|.+++ +| .+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..+..+..+++|+.|+
T Consensus 195 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp CTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 9999999999999985 34 588899999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCcCccccchhhcCCCCCCEEECCCCcccccc
Q 036034 269 LSHNFINGKILSELGAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 269 l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 302 (482)
+++|++.+..+..+..+++|+.+++++|++.+..
T Consensus 273 L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 9999999877778889999999999999987643
No 59
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=5.3e-28 Score=239.78 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=217.6
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCc
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~ 109 (482)
..+.++.++..++ .+|..+. ++++.|+|++|+++...+..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678888888888 6776654 789999999999998888899999999999999999998888899999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCc-cccCCCcCCcC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENK-LVGPIPSSVGH 188 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~ 188 (482)
+|+++...+..|..+++|++|++++|.+ +...+..+..+++|+.|++++|. +....+..+..
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i-----------------~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~ 183 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPI-----------------ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG 183 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCC-----------------CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcc-----------------cccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc
Confidence 9999876666788888888887776655 33455678899999999999954 44344457889
Q ss_pred CCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEe
Q 036034 189 LTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 189 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
+++|+.|++++|.++ .+| .+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|+
T Consensus 184 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred ccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 999999999999998 455 578899999999999999988889999999999999999999998899999999999999
Q ss_pred ccCCcCccccchhhcCCCCCCEEECCCCccccc
Q 036034 269 LSHNFINGKILSELGAIPSIDTVDLSMNNLSGS 301 (482)
Q Consensus 269 l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~ 301 (482)
|++|++++..+..+..+++|+.+++++|++.+.
T Consensus 262 L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 262 LAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 999999987777889999999999999999764
No 60
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=244.63 Aligned_cols=257 Identities=21% Similarity=0.223 Sum_probs=207.3
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|++++..+..+.++++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 58999999999998777778999999999999999999888899999999999999999999655555899999999999
Q ss_pred cCCcccccCC-ccCcCCCCCCEEeCcCCc-ccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC
Q 036034 85 SGNEIRGSIP-STFGHLKRLKSLDLSQNK-LVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 85 ~~n~~~~~~~-~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
++|.++...+ ..+..+++|++|++++|+ +....+..+.++++|++|++++|.+ ++..|..+
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l-----------------~~~~~~~l 194 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL-----------------QSYEPKSL 194 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC-----------------CEECTTTT
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc-----------------CccCHHHH
Confidence 9999985433 478999999999999994 6666667788877777776665544 44567778
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCc---CCCCCCeeeccCCcccC----CCCccCc
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIG---NLKRVEAVKLYDNKLDG----PIPPELM 235 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~----~~~~~~~ 235 (482)
..+++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+. ..+.++.+++.++.+.+ .+|..+.
T Consensus 195 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~ 274 (353)
T 2z80_A 195 KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLN 274 (353)
T ss_dssp TTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHH
T ss_pred hccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHh
Confidence 8888888888888887633222344578888888888888765444333 35667888888887765 3667788
Q ss_pred CCCCCCEEEcCCCcCcccCCcc-ccCccCCCEEeccCCcCccccc
Q 036034 236 NCSKLMELELGNNLLRGSIPSE-IGKLQELYYLDLSHNFINGKIL 279 (482)
Q Consensus 236 ~~~~L~~L~l~~n~l~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~ 279 (482)
.+++|+.|++++|.++ .+|.. +..+++|++|++++|++.+..+
T Consensus 275 ~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 275 QISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8999999999999998 55555 5889999999999999987654
No 61
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.2e-27 Score=239.55 Aligned_cols=262 Identities=25% Similarity=0.341 Sum_probs=222.2
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+++.|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 5899999999997 6787665 89999999999999 5565 5799999999999998 4665 67999999999
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc---cccCcCEEEcccCeecccCCccC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA---SLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~---~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
+|.+++ +|. .+++|+.|++++|+++. +|.. +++|++|++++|.+.. .+.+|+.|++++|.+++ +|
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~-l~--- 177 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTS-LP--- 177 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CC---
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCC-Cc---
Confidence 999985 554 57899999999999985 5654 4899999999999875 46789999999999985 55
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCE
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLME 242 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 242 (482)
..+++|+.|++++|.+++ +|.. +++|+.|++++|.++ .+|.. +++|+.|++++|.+++ +| ..+++|+.
T Consensus 178 ~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~ 245 (622)
T 3g06_A 178 MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKE 245 (622)
T ss_dssp CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCE
T ss_pred ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcE
Confidence 457899999999999984 5543 478999999999998 45543 4789999999999986 55 45689999
Q ss_pred EEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccCC
Q 036034 243 LELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSVR 307 (482)
Q Consensus 243 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~~ 307 (482)
|++++|.++ .+|. .+++|+.|++++|.+. .+|..+..+++|+.|++++|++++..|..+.
T Consensus 246 L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 246 LMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp EECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred EECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 999999998 5665 6789999999999999 6788899999999999999999988776543
No 62
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1e-29 Score=240.28 Aligned_cols=254 Identities=21% Similarity=0.232 Sum_probs=185.6
Q ss_pred cCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcce-eccCcccc-------CCCCCCEEEccCCcccccCCcc
Q 036034 25 LGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHIN-VSIPLEIG-------NLNFLQVLDLSGNEIRGSIPST 96 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~-------~l~~L~~L~L~~n~~~~~~~~~ 96 (482)
++..++|+.|++++|.+ .+|..+... |+.|++++|.++ ..+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44556677788888877 566655433 777888888774 34555554 6778888888888887777776
Q ss_pred C--cCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEcc
Q 036034 97 F--GHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLS 174 (482)
Q Consensus 97 l--~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 174 (482)
+ ..+++|++|++++|++++. |..++.+... .+++|+.|++++|.+++..|..++.+++|++|+++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~------------~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 181 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQW------------LKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLS 181 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT------------CCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECC
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHh------------hcCCCcEEEeeCCCCccchHHHhccCCCCCEEECC
Confidence 5 7778888888888887765 6655554100 01444555555666666667888889999999999
Q ss_pred CCccccC--CCcCC--cCCCCCCEEeccCCcccc--ccC-ccCcCCCCCCeeeccCCcccCCCC-ccCcCCCCCCEEEcC
Q 036034 175 ENKLVGP--IPSSV--GHLTQLNTLNMYSNQING--SIP-LEIGNLKRVEAVKLYDNKLDGPIP-PELMNCSKLMELELG 246 (482)
Q Consensus 175 ~n~l~~~--~~~~~--~~l~~L~~L~l~~n~l~~--~~~-~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~ 246 (482)
+|.+.+. .+..+ ..+++|++|++++|.+++ .++ ..+..+++|+.|++++|.+.+..| ..+..+++|+.|+++
T Consensus 182 ~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 261 (312)
T 1wwl_A 182 DNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261 (312)
T ss_dssp SCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECT
T ss_pred CCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECC
Confidence 9987654 23333 778899999999998873 222 334567899999999999987664 455668899999999
Q ss_pred CCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccc
Q 036034 247 NNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 247 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 300 (482)
+|.++ .+|..+. ++|++|++++|++++. |. +..+++|+.+++++|++++
T Consensus 262 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 262 FTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 99998 7777666 8899999999999866 44 7888999999999998875
No 63
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.4e-29 Score=239.34 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=195.1
Q ss_pred CCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCccc-ccCCcccc-------CCCCCCeeecccCcceeccCccc--
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLV-GNIPSTLG-------HLTQLTTLAIASNHINVSIPLEI-- 73 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~-- 73 (482)
.++|++|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. ++++|++|++++|++++..|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 45789999999998 678776654 999999999994 45776665 79999999999999998888876
Q ss_pred cCCCCCCEEEccCCcccccCCccCcCC-----CCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEE
Q 036034 74 GNLNFLQVLDLSGNEIRGSIPSTFGHL-----KRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLS 148 (482)
Q Consensus 74 ~~l~~L~~L~L~~n~~~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~ 148 (482)
..+++|++|+|++|.+++. |..++.+ ++|++|++++|++.+..|..++++++|++|++++|.+.+..
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~------- 189 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER------- 189 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-------
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-------
Confidence 8999999999999999976 8878777 99999999999999888889999999999998888753210
Q ss_pred cccCeecccCCccC--cCCCCCCEEEccCCcccc--CCC-cCCcCCCCCCEEeccCCccccccC-ccCcCCCCCCeeecc
Q 036034 149 LHYNNLTGPIPSTL--GHLNRIRILDLSENKLVG--PIP-SSVGHLTQLNTLNMYSNQINGSIP-LEIGNLKRVEAVKLY 222 (482)
Q Consensus 149 l~~n~~~~~~~~~~--~~l~~L~~L~l~~n~l~~--~~~-~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~ 222 (482)
..+..+ ..+++|+.|++++|.+++ .++ ..+..+++|+.|++++|.+++..| ..+..+++|+.|+++
T Consensus 190 --------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 261 (312)
T 1wwl_A 190 --------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261 (312)
T ss_dssp --------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECT
T ss_pred --------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECC
Confidence 012222 667778888888887762 112 233466788888888888877654 445567888888888
Q ss_pred CCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCcc
Q 036034 223 DNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 223 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+|.++ .+|..+. ++|+.|++++|++++. |. +..+++|++|++++|++++
T Consensus 262 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 262 FTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 88887 5666665 7888888888888855 55 7888888888888888864
No 64
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-29 Score=239.15 Aligned_cols=266 Identities=21% Similarity=0.207 Sum_probs=177.6
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
++.++++++.+.......+..+++|++|+|++|++++..|..|.++++|++|++++|.+++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445555555544444455566678888888888877666777778888888888887775443 77777788888888
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
|.+++.. ..++|++|++++|++++..+.. + ++|+.|++++|.+++..+..+..++
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~-----------------~~L~~L~l~~N~l~~~~~~~~~~l~ 144 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---G-----------------QGKKNIYLANNKITMLRDLDEGCRS 144 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---C-----------------SSCEEEECCSSCCCSGGGBCTGGGS
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---c-----------------CCCCEEECCCCCCCCccchhhhccC
Confidence 7776422 2367777777777776443221 2 3344455555555555566677778
Q ss_pred CCCEEEccCCccccCCCcCC-cCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEc
Q 036034 167 RIRILDLSENKLVGPIPSSV-GHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELEL 245 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 245 (482)
+|+.|++++|.+.+..+..+ ..+++|++|++++|.+++. + ....+++|+.|++++|.+++ +|..+..+++|+.|++
T Consensus 145 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 145 RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (317)
T ss_dssp SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEEC
Confidence 88888888888876555555 3577888888888887754 2 22347777888888887774 3444777778888888
Q ss_pred CCCcCcccCCccccCccCCCEEeccCCcCc-cccchhhcCCCCCCEEECCC-CccccccC
Q 036034 246 GNNLLRGSIPSEIGKLQELYYLDLSHNFIN-GKILSELGAIPSIDTVDLSM-NNLSGSIP 303 (482)
Q Consensus 246 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~l~l~~-n~l~~~~p 303 (482)
++|.++ .+|..+..+++|+.|++++|++. +..+..+..++.|+.+++++ +.+.+..|
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 888777 45666777777888888888777 55555666777777777763 33444333
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.6e-29 Score=236.25 Aligned_cols=245 Identities=24% Similarity=0.219 Sum_probs=201.9
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ +.++++|++|++++|.+++. + ..++|++|
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L 104 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETL 104 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEE
Confidence 45789999999999998777899999999999999999997654 89999999999999999853 2 34899999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
++++|.+++..+.. +++|++|++++|++++..+..+..+++|++|++++|.+. +..+..+
T Consensus 105 ~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------~~~~~~~ 164 (317)
T 3o53_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-----------------TVNFAEL 164 (317)
T ss_dssp ECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC-----------------EEEGGGG
T ss_pred ECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC-----------------cccHHHH
Confidence 99999998765543 678999999999999877778888888877777766554 3334444
Q ss_pred -cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 163 -GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 163 -~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
..+++|+.|++++|.+++. + ....+++|++|++++|.+++ +|..+..+++|+.|++++|.++ .+|..+..+++|+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~ 240 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE 240 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCC
T ss_pred hhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCC
Confidence 3678899999999998754 3 33458899999999999985 5556888999999999999998 4677888899999
Q ss_pred EEEcCCCcCc-ccCCccccCccCCCEEeccCC-cCcccc
Q 036034 242 ELELGNNLLR-GSIPSEIGKLQELYYLDLSHN-FINGKI 278 (482)
Q Consensus 242 ~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n-~l~~~~ 278 (482)
.|++++|.+. +..|..+..+++|+.+++.++ .+.+..
T Consensus 241 ~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 241 HFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp EEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSS
T ss_pred EEEccCCCccCcCHHHHHhccccceEEECCCchhccCCc
Confidence 9999999998 777888899999999999854 444433
No 66
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.8e-28 Score=240.40 Aligned_cols=236 Identities=22% Similarity=0.220 Sum_probs=185.7
Q ss_pred CCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEe
Q 036034 28 LSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLD 107 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~ 107 (482)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3489999999999998888889999999999999999987655 8889999999999999885332 38899999
Q ss_pred CcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCc
Q 036034 108 LSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVG 187 (482)
Q Consensus 108 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 187 (482)
+++|.+++..+. .+++|++|+ +++|.+++..|..++.+++|+.|++++|.+++..|..+.
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~-----------------L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIY-----------------LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEE-----------------CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CcCCcCCCCCcc---ccCCCCEEE-----------------CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 999998865443 234455544 455555556677777888888888888888877777665
Q ss_pred -CCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCE
Q 036034 188 -HLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYY 266 (482)
Q Consensus 188 -~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 266 (482)
.+++|+.|++++|.+++.. ....+++|+.|++++|.+++ +|+.+..+++|+.|++++|.+++ +|..+..+++|+.
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~ 241 (487)
T 3oja_A 166 ASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH 241 (487)
T ss_dssp GGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE
T ss_pred hhCCcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCE
Confidence 6888889999988888652 23358889999999998886 44458888999999999999884 6777888899999
Q ss_pred EeccCCcCc-cccchhhcCCCCCCEEECC
Q 036034 267 LDLSHNFIN-GKILSELGAIPSIDTVDLS 294 (482)
Q Consensus 267 L~l~~n~l~-~~~~~~~~~~~~L~~l~l~ 294 (482)
|++++|++. +..+..+..++.|+.++++
T Consensus 242 L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 999999987 4555667777777777775
No 67
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.1e-28 Score=242.16 Aligned_cols=230 Identities=19% Similarity=0.206 Sum_probs=180.4
Q ss_pred CCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEE
Q 036034 51 HLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTL 130 (482)
Q Consensus 51 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 130 (482)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++.. ..++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L--- 101 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSI--- 101 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTC---
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCc---
Confidence 44477777777777776666777777777777777777765544 777777777777777776422 11444
Q ss_pred EcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccC
Q 036034 131 NMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEI 210 (482)
Q Consensus 131 ~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 210 (482)
+.|++++|.+++..+. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+++..|..+
T Consensus 102 --------------~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 164 (487)
T 3oja_A 102 --------------ETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (487)
T ss_dssp --------------CEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred --------------CEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHH
Confidence 4455555555544433 35789999999999998888889999999999999999999888887
Q ss_pred c-CCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCC
Q 036034 211 G-NLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSID 289 (482)
Q Consensus 211 ~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 289 (482)
. .+++|+.|++++|.+++. +....+++|+.|++++|.+++. |..+..+++|+.|++++|.+.+ +|..+..+++|+
T Consensus 165 ~~~l~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~ 240 (487)
T 3oja_A 165 AASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240 (487)
T ss_dssp GGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCC
T ss_pred hhhCCcccEEecCCCccccc--cccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCC
Confidence 6 799999999999999865 2344689999999999999965 4458899999999999999995 677788899999
Q ss_pred EEECCCCccc-cccCccCCCCCe
Q 036034 290 TVDLSMNNLS-GSIPKSVRKVPH 311 (482)
Q Consensus 290 ~l~l~~n~l~-~~~p~~~~~l~~ 311 (482)
.+++++|++. +.+|..+..++.
T Consensus 241 ~L~l~~N~l~c~~~~~~~~~l~~ 263 (487)
T 3oja_A 241 HFDLRGNGFHCGTLRDFFSKNQR 263 (487)
T ss_dssp EEECTTCCBCHHHHHHHHTTCHH
T ss_pred EEEcCCCCCcCcchHHHHHhCCC
Confidence 9999999998 556666655443
No 68
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.8e-25 Score=204.51 Aligned_cols=228 Identities=25% Similarity=0.267 Sum_probs=130.9
Q ss_pred EEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCc
Q 036034 9 HLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNE 88 (482)
Q Consensus 9 ~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 88 (482)
.++.++..++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++...+..|.++++|++|++++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3445555553 4555442 467777777777776666677777777777777777776555667777777777777777
Q ss_pred ccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCC
Q 036034 89 IRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRI 168 (482)
Q Consensus 89 ~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L 168 (482)
+++..+..+..+++|++|++++|++.+..+..+..+++|++|++++|.+.. ..+|..+..+++|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------~~l~~~~~~l~~L 151 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS----------------FKLPEYFSNLTNL 151 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC----------------CCCCGGGGGCTTC
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce----------------ecCchhhccCCCC
Confidence 776666667777777777777777665444455555555555544443321 0134455555555
Q ss_pred CEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCC-eeeccCCcccCCCCccCcCCCCCCEEEcCC
Q 036034 169 RILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVE-AVKLYDNKLDGPIPPELMNCSKLMELELGN 247 (482)
Q Consensus 169 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 247 (482)
+.|++++|.+++..+..+..+++|+ .+. .|++++|.+.+..+..+ ...+|+.|++++
T Consensus 152 ~~L~Ls~N~l~~~~~~~~~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~ 209 (276)
T 2z62_A 152 EHLDLSSNKIQSIYCTDLRVLHQMP---------------------LLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDT 209 (276)
T ss_dssp CEEECCSSCCCEECGGGGHHHHTCT---------------------TCCEEEECCSSCCCEECTTSS-CSCCEEEEECCS
T ss_pred CEEECCCCCCCcCCHHHhhhhhhcc---------------------ccceeeecCCCcccccCcccc-CCCcccEEECCC
Confidence 5555555555543333333333333 111 44555555543322222 233566666666
Q ss_pred CcCcccCCccccCccCCCEEeccCCcCccc
Q 036034 248 NLLRGSIPSEIGKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 248 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 277 (482)
|.+++..+..+..+++|+.|++++|++.+.
T Consensus 210 n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 210 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp SCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CceeecCHhHhcccccccEEEccCCccccc
Confidence 666644444456666666666666666543
No 69
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.6e-25 Score=204.07 Aligned_cols=227 Identities=21% Similarity=0.221 Sum_probs=146.2
Q ss_pred EEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCc
Q 036034 33 NLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNK 112 (482)
Q Consensus 33 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 112 (482)
.++..+..+. .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3444455555 4555442 467777777777776555567777777777777777776666667777777777777777
Q ss_pred ccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCC
Q 036034 113 LVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQL 192 (482)
Q Consensus 113 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 192 (482)
+.+..+..+.++++|++|++.+|.+. +..+..+..+++|+.|++++|.+.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~-----------------~~~~~~~~~l~~L~~L~l~~n~l~~~----------- 139 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLA-----------------SLENFPIGHLKTLKELNVAHNLIQSF----------- 139 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCC-----------------CSTTCCCTTCTTCCEEECCSSCCCCC-----------
T ss_pred cCccChhhhcCCccccEEECCCCCcc-----------------ccCchhcccCCCCCEEECcCCcccee-----------
Confidence 66555555555555555554444332 12222344445555555555554431
Q ss_pred CEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC----EEEcCCCcCcccCCccccCccCCCEEe
Q 036034 193 NTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM----ELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 193 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~----~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
.+|..+..+++|+.|++++|++++..+..+..+++|+ .|++++|.+++..+..+. ..+|+.|+
T Consensus 140 ------------~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~ 206 (276)
T 2z62_A 140 ------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELA 206 (276)
T ss_dssp ------------CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEE
T ss_pred ------------cCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEE
Confidence 1344455555555555555555544444454444454 899999999966555444 45899999
Q ss_pred ccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 269 LSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 269 l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
+++|.+.+..+..+..+++|+.+++++|++.+..|
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99999997777778899999999999999998665
No 70
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2.3e-24 Score=220.10 Aligned_cols=255 Identities=25% Similarity=0.337 Sum_probs=212.1
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDL 108 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 108 (482)
.++++|++++|.++ .+|..+. ++|++|++++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 46999999999999 7787765 89999999999998 5665 5789999999999998 4665 6799999999
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcc---cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcC
Q 036034 109 SQNKLVGPIPSSLGHLTQLTTLNMRSNLINA---SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSS 185 (482)
Q Consensus 109 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~---~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 185 (482)
++|++++ +|. .+++|++|++++|.+.. .+++|+.|++++|.+++ +|. .+.+|+.|++++|.+++ +|
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~-- 177 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP-- 177 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC--
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc--
Confidence 9999985 454 67899999999998875 35899999999999985 443 35789999999999985 55
Q ss_pred CcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCC
Q 036034 186 VGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELY 265 (482)
Q Consensus 186 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 265 (482)
..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|. .+++|+.|++++|.+++ +| ..+++|+
T Consensus 178 -~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~ 244 (622)
T 3g06_A 178 -MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELK 244 (622)
T ss_dssp -CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCC
T ss_pred -ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCc
Confidence 456899999999999985 4443 4789999999999984 443 35889999999999985 55 4568999
Q ss_pred EEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccC---CCCCeEeccCCcCcccC
Q 036034 266 YLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSV---RKVPHLDVLGNNLEGEI 323 (482)
Q Consensus 266 ~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~---~~l~~l~~~~n~~~~~~ 323 (482)
.|++++|.+.. +|. .+++|+.|++++|+++ .+|..+ .++..+++++|++.+..
T Consensus 245 ~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 245 ELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHH
T ss_pred EEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcC
Confidence 99999999984 443 6789999999999999 566654 56888999999988643
No 71
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=5.9e-24 Score=196.36 Aligned_cols=201 Identities=24% Similarity=0.285 Sum_probs=104.1
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
.+.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|.++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 455555555554 3444332 4555555555555544444555555555555555555533333345555555555555
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
|.++...+..+..+++|++|++++|++++..+..+ ..++
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----------------------------------------~~l~ 133 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVF-----------------------------------------DSLT 133 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTT-----------------------------------------TTCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHh-----------------------------------------CcCc
Confidence 55554444444555555555555555544333334 4444
Q ss_pred CCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcC
Q 036034 167 RIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELG 246 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 246 (482)
+|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|+++
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 45555555555443333334455555555555555554434445555555555555555554444445556666666666
Q ss_pred CCcCc
Q 036034 247 NNLLR 251 (482)
Q Consensus 247 ~n~l~ 251 (482)
+|.+.
T Consensus 214 ~N~~~ 218 (270)
T 2o6q_A 214 ENPWD 218 (270)
T ss_dssp SSCBC
T ss_pred CCCee
Confidence 66554
No 72
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.2e-24 Score=201.30 Aligned_cols=224 Identities=24% Similarity=0.307 Sum_probs=169.7
Q ss_pred EeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcc
Q 036034 10 LDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEI 89 (482)
Q Consensus 10 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 89 (482)
+++.++.+.+. ..+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++ + ..+..+++|++|++++|.+
T Consensus 24 l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l 97 (272)
T 3rfs_A 24 ANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQL 97 (272)
T ss_dssp HHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCC
T ss_pred HHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCcc
Confidence 44555555433 335567888888888888773 3 347788888888888888875 2 4678888888888888888
Q ss_pred cccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCC
Q 036034 90 RGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIR 169 (482)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 169 (482)
++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+ ++..+..+..+++|+
T Consensus 98 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l-----------------~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 98 QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL-----------------QSLPKGVFDKLTNLT 160 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------CCCCTTTTTTCTTCC
T ss_pred CccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCcc-----------------CccCHHHhccCccCC
Confidence 877777788888888888888888876666678888888777766554 334445567788888
Q ss_pred EEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCc
Q 036034 170 ILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNL 249 (482)
Q Consensus 170 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 249 (482)
.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+ .++.|+.|+++.|.
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~ 233 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINK 233 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHH
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHh
Confidence 88888888886666667888888888888888887777777888888888888887764 35678888888888
Q ss_pred CcccCCccccCccC
Q 036034 250 LRGSIPSEIGKLQE 263 (482)
Q Consensus 250 l~~~~~~~~~~~~~ 263 (482)
++|.+|..++.++.
T Consensus 234 ~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 234 HSGVVRNSAGSVAP 247 (272)
T ss_dssp TGGGBBCTTSCBCG
T ss_pred CCCcccCcccccCC
Confidence 88888887776543
No 73
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=4.7e-25 Score=203.94 Aligned_cols=229 Identities=21% Similarity=0.261 Sum_probs=185.1
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDL 108 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 108 (482)
.++..+++..+.+.+. ..+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++ + ..+..+++|++|++
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 3455666777766644 335678899999999998873 3 357889999999999999875 3 47888999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcC
Q 036034 109 SQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGH 188 (482)
Q Consensus 109 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 188 (482)
++|.+++..+..+..+++|++|++++|.+ ++..+..+..+++|++|++++|.+++..+..+..
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l-----------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 155 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQL-----------------QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK 155 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCC-----------------CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcC-----------------CccCHHHhccCCCCCEEECCCCccCccCHHHhcc
Confidence 99999877777788888888887776654 3345566788899999999999998766677788
Q ss_pred CCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEe
Q 036034 189 LTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 189 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+ .++.|+.++
T Consensus 156 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~ 228 (272)
T 3rfs_A 156 LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLS 228 (272)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHH
T ss_pred CccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHH
Confidence 9999999999999987777778889999999999999998777778889999999999998764 356788889
Q ss_pred ccCCcCccccchhhcCCCC
Q 036034 269 LSHNFINGKILSELGAIPS 287 (482)
Q Consensus 269 l~~n~l~~~~~~~~~~~~~ 287 (482)
++.|.+.|.+|..++.++.
T Consensus 229 ~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 229 EWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHHTGGGBBCTTSCBCG
T ss_pred HHHHhCCCcccCcccccCC
Confidence 9999999888887765543
No 74
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=7.5e-24 Score=197.38 Aligned_cols=201 Identities=26% Similarity=0.285 Sum_probs=114.4
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
+++++++++++++++++ .+|..+. +++++|+|++|.+++..+..|.++++|++|++++|.++...+ ...+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCE
Confidence 35666777777777765 3454442 567777777777776666667777777777777777664322 256666777
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCcc
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPST 161 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~ 161 (482)
|++++|.++ .+|..+..+++|++|++++|++++..+..|..+++|++|++++|.+ ++..+..
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l-----------------~~~~~~~ 143 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL-----------------KTLPPGL 143 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC-----------------CCCCTTT
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC-----------------CccChhh
Confidence 777777665 4566666666666666666666654445555555555555444433 2223334
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcc
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKL 226 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 226 (482)
+..+++|+.|++++|++++..+..+..+++|+.|++++|.++ .+|..+...++|+.+++++|.+
T Consensus 144 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 445555555555555555333333445555555555555554 3444444444444444444443
No 75
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2e-23 Score=192.83 Aligned_cols=183 Identities=24% Similarity=0.280 Sum_probs=135.1
Q ss_pred CCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeeccc
Q 036034 78 FLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGP 157 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~ 157 (482)
+|++|+|++|.++...+..|..+++|++|++++|.++...+..+.++++|++|++++|.+ ++.
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l-----------------~~~ 100 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL-----------------QAL 100 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCC-----------------CCC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcC-----------------CcC
Confidence 445555555555444444455555555555555555533333345555555555444433 223
Q ss_pred CCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCC
Q 036034 158 IPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNC 237 (482)
Q Consensus 158 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 237 (482)
.+..+..+++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+..+..+..+
T Consensus 101 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 180 (270)
T 2o6q_A 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180 (270)
T ss_dssp CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccC
Confidence 33456677888888888888887777788999999999999999997666678999999999999999998777778999
Q ss_pred CCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccc
Q 036034 238 SKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 238 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 277 (482)
++|+.|++++|.+++..+..+..+++|+.|++++|++...
T Consensus 181 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 9999999999999977677789999999999999998754
No 76
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.8e-23 Score=194.82 Aligned_cols=203 Identities=23% Similarity=0.215 Sum_probs=97.8
Q ss_pred cCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCC
Q 036034 25 LGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLK 104 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 104 (482)
+..++++++++++++.++ .+|..+. ++++.|++++|.+++..+..|.++++|++|+|++|.+++..+ .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 445566666666666665 3443332 455666666666655555555555666666666655553221 14455555
Q ss_pred EEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc
Q 036034 105 SLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS 184 (482)
Q Consensus 105 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 184 (482)
+|++++|++. .+|..+ ..+++|+.|++++|++++..+.
T Consensus 81 ~L~Ls~N~l~-~l~~~~-----------------------------------------~~l~~L~~L~l~~N~l~~l~~~ 118 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLG-----------------------------------------QTLPALTVLDVSFNRLTSLPLG 118 (290)
T ss_dssp EEECCSSCCS-SCCCCT-----------------------------------------TTCTTCCEEECCSSCCCCCCSS
T ss_pred EEECCCCcCC-cCchhh-----------------------------------------ccCCCCCEEECCCCcCcccCHH
Confidence 5555555544 233333 3344444444444444433333
Q ss_pred CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCC
Q 036034 185 SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQEL 264 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L 264 (482)
.+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++ .+|..+...++|
T Consensus 119 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L 197 (290)
T 1p9a_G 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLL 197 (290)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCC
T ss_pred HHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccC
Confidence 4444444444444444444333333344444444444444444333333444555555555555554 344444444455
Q ss_pred CEEeccCCcCc
Q 036034 265 YYLDLSHNFIN 275 (482)
Q Consensus 265 ~~L~l~~n~l~ 275 (482)
+.+++++|++.
T Consensus 198 ~~l~L~~Np~~ 208 (290)
T 1p9a_G 198 PFAFLHGNPWL 208 (290)
T ss_dssp SEEECCSCCBC
T ss_pred CeEEeCCCCcc
Confidence 55555555443
No 77
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=2.6e-26 Score=223.76 Aligned_cols=115 Identities=21% Similarity=0.225 Sum_probs=66.5
Q ss_pred CCCCCCEEeccCCcccc-----ccCccCcCCCCCCeeeccCCccc----CCCCccCcCCCCCCEEEcCCCcCccc----C
Q 036034 188 HLTQLNTLNMYSNQING-----SIPLEIGNLKRVEAVKLYDNKLD----GPIPPELMNCSKLMELELGNNLLRGS----I 254 (482)
Q Consensus 188 ~l~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~~~~L~~L~l~~n~l~~~----~ 254 (482)
.+++|+.|++++|.++. ..+..+..+++|+.|++++|.++ ..+|..+..+++|+.|+|++|.+++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 34444444444444431 12224445555555555555553 33455566666677777777766644 3
Q ss_pred Cccc--cCccCCCEEeccCCcCcc----ccchhh-cCCCCCCEEECCCCcccccc
Q 036034 255 PSEI--GKLQELYYLDLSHNFING----KILSEL-GAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 255 ~~~~--~~~~~L~~L~l~~n~l~~----~~~~~~-~~~~~L~~l~l~~n~l~~~~ 302 (482)
+..+ +.+++|+.|++++|.+.+ .++..+ ..+++|+.|++++|++++..
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 4444 236777777777777776 355555 45677888888887777554
No 78
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=3.7e-26 Score=235.63 Aligned_cols=316 Identities=14% Similarity=0.088 Sum_probs=189.3
Q ss_pred CCCCCEEeccCCccccCC----CcccCCCCCCCEEeCcCCccc----ccCCccccCCCCCCeeecccCcceeccCccccC
Q 036034 4 LRNLVHLDLSDNYLWGYI----PPTLGRLSKLENLHLSSNSLV----GNIPSTLGHLTQLTTLAIASNHINVSIPLEIGN 75 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~----~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 75 (482)
+++|++|+|++|.+++.. +..+..+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 455555555555544331 122334455555555555554 1223333445555555555555542 4444555
Q ss_pred CCCCCEEEccCCccc---ccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc--------ccccCc
Q 036034 76 LNFLQVLDLSGNEIR---GSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN--------ASLVNL 144 (482)
Q Consensus 76 l~~L~~L~L~~n~~~---~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~--------~~~~~L 144 (482)
+++|++|+++..... ...+..+..+++|+.|++.++.. ..+|..+..+++|++|++++|.+. ..+++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 555555555432211 12334455556666666665432 245666667778888888877754 236778
Q ss_pred CEEEcccCeecccCCccCcCCCCCCEEEccC-----------CccccC-CCcCCcCCCCCCEEeccCCccccccCccCcC
Q 036034 145 TSLSLHYNNLTGPIPSTLGHLNRIRILDLSE-----------NKLVGP-IPSSVGHLTQLNTLNMYSNQINGSIPLEIGN 212 (482)
Q Consensus 145 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-----------n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 212 (482)
+.|+++++-..+.++.....+++|+.|++++ |.+++. ++.....+++|++|+++.|.+++..+..+..
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 8888873322223333445677788888883 444432 1122345788888888888887766666654
Q ss_pred -CCCCCeeecc----CCcccCC-----CCccCcCCCCCCEEEcCCCc--CcccCCcccc-CccCCCEEeccCCcCccccc
Q 036034 213 -LKRVEAVKLY----DNKLDGP-----IPPELMNCSKLMELELGNNL--LRGSIPSEIG-KLQELYYLDLSHNFINGKIL 279 (482)
Q Consensus 213 -l~~L~~L~l~----~n~l~~~-----~~~~~~~~~~L~~L~l~~n~--l~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~ 279 (482)
+++|+.|++. .|.+++. ++..+..+++|+.|+++.|. +++..+..++ .+++|++|++++|.+++...
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 7888888886 5566643 22335568888999887533 5554444443 47889999999998876443
Q ss_pred h-hhcCCCCCCEEECCCCccccccC----ccCCCCCeEeccCCcCcc
Q 036034 280 S-ELGAIPSIDTVDLSMNNLSGSIP----KSVRKVPHLDVLGNNLEG 321 (482)
Q Consensus 280 ~-~~~~~~~L~~l~l~~n~l~~~~p----~~~~~l~~l~~~~n~~~~ 321 (482)
. .+..+++|+.|++++|++++... ..+.+++.+++++|++++
T Consensus 481 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 3 45678899999999998865422 235678889999988654
No 79
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=4.2e-25 Score=211.11 Aligned_cols=254 Identities=18% Similarity=0.189 Sum_probs=166.3
Q ss_pred CCCEEeccCCccccCCCcccCCC--CCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceec-cCccccCCCCCCEE
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRL--SKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVS-IPLEIGNLNFLQVL 82 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L 82 (482)
.++.+|++++.+. +..+..+ ++++.|++++|.+.+..+. +.++++|++|++++|.++.. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3677888887764 4555556 7788888888888766554 45678888888888887654 66677778888888
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCC-ccccc-CCccccCCCCCCEEEcccc-cCcccccCcCEEEcccCeecccCC
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQN-KLVGP-IPSSLGHLTQLTTLNMRSN-LINASLVNLTSLSLHYNNLTGPIP 159 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~l~~n-~i~~~~~~L~~L~l~~n~~~~~~~ 159 (482)
+|++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .++.. .++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~----------------~~~ 187 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK----------------HVQ 187 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH----------------HHH
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH----------------HHH
Confidence 88888877777777777888888888888 56542 4555666777777777766 55421 133
Q ss_pred ccCcCCC-CCCEEEccCC--ccc-cCCCcCCcCCCCCCEEeccCCc-cccccCccCcCCCCCCeeeccCCc-ccCCCCcc
Q 036034 160 STLGHLN-RIRILDLSEN--KLV-GPIPSSVGHLTQLNTLNMYSNQ-INGSIPLEIGNLKRVEAVKLYDNK-LDGPIPPE 233 (482)
Q Consensus 160 ~~~~~l~-~L~~L~l~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~ 233 (482)
..+..++ +|+.|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 267 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHH
Confidence 4455566 6777777766 333 2344455566777777777776 555556666677777777777774 22222224
Q ss_pred CcCCCCCCEEEcCCCcCcccCCccccCc-cCCCEEeccCCcCccccchhhc
Q 036034 234 LMNCSKLMELELGNNLLRGSIPSEIGKL-QELYYLDLSHNFINGKILSELG 283 (482)
Q Consensus 234 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~ 283 (482)
+..+++|+.|++++| ++. ..+..+ ..+..|++++|++++..|..++
T Consensus 268 l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 268 LGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 666777777777777 332 123333 2366666777777776665544
No 80
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8e-26 Score=220.28 Aligned_cols=116 Identities=15% Similarity=0.264 Sum_probs=50.6
Q ss_pred CcCCCCCCEEEccCCcccc-----CCCcCCcCCCCCCEEeccCCccc----cccCccCcCCCCCCeeeccCCcccCC---
Q 036034 162 LGHLNRIRILDLSENKLVG-----PIPSSVGHLTQLNTLNMYSNQIN----GSIPLEIGNLKRVEAVKLYDNKLDGP--- 229 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~--- 229 (482)
+..+++|+.|++++|.++. ..+..+..+++|+.|+|++|.++ +.+|..+..+++|+.|++++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 3344445555555544431 11123444445555555555443 23344444444555555555544432
Q ss_pred -CCccC--cCCCCCCEEEcCCCcCcc----cCCccc-cCccCCCEEeccCCcCccc
Q 036034 230 -IPPEL--MNCSKLMELELGNNLLRG----SIPSEI-GKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 230 -~~~~~--~~~~~L~~L~l~~n~l~~----~~~~~~-~~~~~L~~L~l~~n~l~~~ 277 (482)
++..+ ..+++|+.|++++|.+++ .+|..+ .++++|++|++++|++.+.
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 22233 124445555555554443 233333 3344555555555544433
No 81
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.3e-25 Score=214.93 Aligned_cols=257 Identities=17% Similarity=0.203 Sum_probs=168.0
Q ss_pred EEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCC----ccccCCC-CCCeeecccCcceeccCccccCC-----CC
Q 036034 9 HLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIP----STLGHLT-QLTTLAIASNHINVSIPLEIGNL-----NF 78 (482)
Q Consensus 9 ~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~~ 78 (482)
+++++.|.+++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.++...+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57889999988888877777779999999999997766 7788888 89999999999987666666664 89
Q ss_pred CCEEEccCCcccccCCccCc----CC-CCCCEEeCcCCcccccCCcccc----C-CCCCCEEEcccccCcccccCcCEEE
Q 036034 79 LQVLDLSGNEIRGSIPSTFG----HL-KRLKSLDLSQNKLVGPIPSSLG----H-LTQLTTLNMRSNLINASLVNLTSLS 148 (482)
Q Consensus 79 L~~L~L~~n~~~~~~~~~l~----~l-~~L~~L~L~~n~l~~~~~~~l~----~-l~~L~~L~l~~n~i~~~~~~L~~L~ 148 (482)
|++|+|++|.+++..+..++ .+ ++|++|++++|++++..+..+. . .++|++|++++|.+...-
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~------- 154 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKS------- 154 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSC-------
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHH-------
Confidence 99999999999876665444 34 7899999999998866554443 3 257777777777665210
Q ss_pred cccCeecccCCccCcCCC-CCCEEEccCCccccCCCcC----CcCC-CCCCEEeccCCccccc----cCccCcC-CCCCC
Q 036034 149 LHYNNLTGPIPSTLGHLN-RIRILDLSENKLVGPIPSS----VGHL-TQLNTLNMYSNQINGS----IPLEIGN-LKRVE 217 (482)
Q Consensus 149 l~~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~----~~~l-~~L~~L~l~~n~l~~~----~~~~~~~-l~~L~ 217 (482)
...++..+..++ +|+.|++++|.+++..+.. +..+ ++|+.|++++|.+++. ++..+.. .++|+
T Consensus 155 ------~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~ 228 (362)
T 3goz_A 155 ------SDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVV 228 (362)
T ss_dssp ------HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCC
T ss_pred ------HHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCce
Confidence 001222233333 5666666666665443322 2233 3666666666666542 2333333 24666
Q ss_pred eeeccCCcccCCCC----ccCcCCCCCCEEEcCCCcCccc-------CCccccCccCCCEEeccCCcCcccc
Q 036034 218 AVKLYDNKLDGPIP----PELMNCSKLMELELGNNLLRGS-------IPSEIGKLQELYYLDLSHNFINGKI 278 (482)
Q Consensus 218 ~L~l~~n~l~~~~~----~~~~~~~~L~~L~l~~n~l~~~-------~~~~~~~~~~L~~L~l~~n~l~~~~ 278 (482)
.|++++|.+++..+ ..+..+++|+.|++++|.+.+. ++..+..+++|+.||+++|.+.+..
T Consensus 229 ~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 229 SLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp EEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred EEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 66666666655433 2334566777777777764322 2234556667777777777776553
No 82
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5e-24 Score=201.01 Aligned_cols=228 Identities=17% Similarity=0.143 Sum_probs=155.1
Q ss_pred CCCCEEeCcCCcccccCCc---cccCCCCCCeeecccCcceeccCccc--cCCCCCCEEEccCCcccccCC----ccCcC
Q 036034 29 SKLENLHLSSNSLVGNIPS---TLGHLTQLTTLAIASNHINVSIPLEI--GNLNFLQVLDLSGNEIRGSIP----STFGH 99 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~n~~~~~~~----~~l~~ 99 (482)
..++.+.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3567777777766532111 12234668888888888887777777 788888888888888876544 34557
Q ss_pred CCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecc-cCCccCcCCCCCCEEEccCCcc
Q 036034 100 LKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTG-PIPSTLGHLNRIRILDLSENKL 178 (482)
Q Consensus 100 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~l~~n~l 178 (482)
+++|++|++++|++.+..+..++.+++|++|++++|.+.+. .+ ..+..+..+++|++|++++|.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------------~~~~~~~~~~~l~~L~~L~Ls~N~l 209 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGE--------------RGLMAALCPHKFPAIQNLALRNTGM 209 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHH--------------HHHHTTSCTTSSCCCCSCBCCSSCC
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccc--------------hhhhHHHhhhcCCCCCEEECCCCCC
Confidence 88888888888888877777888888888888887765320 00 0122234566777777777776
Q ss_pred ccCCCc----CCcCCCCCCEEeccCCccccccCccCcCC---CCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCc
Q 036034 179 VGPIPS----SVGHLTQLNTLNMYSNQINGSIPLEIGNL---KRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLR 251 (482)
Q Consensus 179 ~~~~~~----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 251 (482)
+. ++. .+..+++|++|++++|.+++..|..+..+ ++|+.|++++|+++ .+|..+. ++|+.|++++|.++
T Consensus 210 ~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 210 ET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLN 285 (310)
T ss_dssp CC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCC
T ss_pred Cc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCC
Confidence 52 222 23556777777777777776666666555 57777777777777 4555553 67888888888877
Q ss_pred ccCCccccCccCCCEEeccCCcCcc
Q 036034 252 GSIPSEIGKLQELYYLDLSHNFING 276 (482)
Q Consensus 252 ~~~~~~~~~~~~L~~L~l~~n~l~~ 276 (482)
+. |. +..+++|+.|++++|++++
T Consensus 286 ~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 286 RA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CC-ch-hhhCCCccEEECcCCCCCC
Confidence 43 33 5667888888888887764
No 83
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=6.9e-25 Score=209.58 Aligned_cols=254 Identities=17% Similarity=0.258 Sum_probs=141.4
Q ss_pred CCCEEeCcCCcccccCCccccCC--CCCCeeecccCcceeccCccccCCCCCCEEEccCCccccc-CCccCcCCCCCCEE
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHL--TQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGS-IPSTFGHLKRLKSL 106 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~~~~l~~l~~L~~L 106 (482)
.++.++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3566777666655 3344555 6667777777766654333 44566677777777666544 55566666667777
Q ss_pred eCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecc-cCCccCcCCCCCCEEEccCC-ccccC-CC
Q 036034 107 DLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTG-PIPSTLGHLNRIRILDLSEN-KLVGP-IP 183 (482)
Q Consensus 107 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~l~~n-~l~~~-~~ 183 (482)
++++|.+++..+..++.+++|++|++++|. .+++ .++..+..+++|+.|++++| .+++. ++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~----------------~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCS----------------GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCB----------------SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCC----------------CCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 776666665555566666666666555541 1222 13344556677777777777 66543 34
Q ss_pred cCCcCCC-CCCEEeccCC--ccc-cccCccCcCCCCCCeeeccCCc-ccCCCCccCcCCCCCCEEEcCCCc-CcccCCcc
Q 036034 184 SSVGHLT-QLNTLNMYSN--QIN-GSIPLEIGNLKRVEAVKLYDNK-LDGPIPPELMNCSKLMELELGNNL-LRGSIPSE 257 (482)
Q Consensus 184 ~~~~~l~-~L~~L~l~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~ 257 (482)
..+..++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 267 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHH
Confidence 4556666 7777777776 343 2344455556666666666666 444455555666666666666663 22111123
Q ss_pred ccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccCccC
Q 036034 258 IGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIPKSV 306 (482)
Q Consensus 258 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~~ 306 (482)
+..+++|+.|++++| +.......+. ..++.|++++|++++..|..+
T Consensus 268 l~~~~~L~~L~l~~~-i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 268 LGEIPTLKTLQVFGI-VPDGTLQLLK--EALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGGCTTCCEEECTTS-SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSC
T ss_pred HhcCCCCCEEeccCc-cCHHHHHHHH--hhCcceEEecccCccccCCcc
Confidence 455566666666665 3332222221 112333355555555555443
No 84
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.8e-25 Score=212.65 Aligned_cols=255 Identities=19% Similarity=0.175 Sum_probs=186.8
Q ss_pred EEeCcCCcccccCCccccCCCCCCeeecccCcceeccC----ccccCCC-CCCEEEccCCcccccCCccCcCC-----CC
Q 036034 33 NLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIP----LEIGNLN-FLQVLDLSGNEIRGSIPSTFGHL-----KR 102 (482)
Q Consensus 33 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~~~~~~~~~l~~l-----~~ 102 (482)
.++++.|.+++.+|..+...++|++|++++|.++...+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35678888888888777777778888888888886555 6677787 88888888888887766666664 88
Q ss_pred CCEEeCcCCcccccCCccccC----C-CCCCEEEcccccCcccccCcCEEEcccCeecccCCcc----CcC-CCCCCEEE
Q 036034 103 LKSLDLSQNKLVGPIPSSLGH----L-TQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPST----LGH-LNRIRILD 172 (482)
Q Consensus 103 L~~L~L~~n~l~~~~~~~l~~----l-~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~----~~~-l~~L~~L~ 172 (482)
|++|+|++|.+++..+..++. + ++|++|++++|.+ ++..+.. +.. ..+|++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l-----------------~~~~~~~l~~~l~~~~~~L~~L~ 144 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDF-----------------SSKSSSEFKQAFSNLPASITSLN 144 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCG-----------------GGSCHHHHHHHHTTSCTTCCEEE
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcC-----------------CcHHHHHHHHHHHhCCCceeEEE
Confidence 888888888887655554333 3 5666666655554 4333322 333 36899999
Q ss_pred ccCCccccCCC----cCCcCCC-CCCEEeccCCccccccCccCc----CC-CCCCeeeccCCcccCC----CCccCcC-C
Q 036034 173 LSENKLVGPIP----SSVGHLT-QLNTLNMYSNQINGSIPLEIG----NL-KRVEAVKLYDNKLDGP----IPPELMN-C 237 (482)
Q Consensus 173 l~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~----~l-~~L~~L~l~~n~l~~~----~~~~~~~-~ 237 (482)
+++|.+++..+ ..+..++ +|++|++++|.+++..+..+. .+ ++|+.|++++|.+++. ++..+.. .
T Consensus 145 Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~ 224 (362)
T 3goz_A 145 LRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIP 224 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSC
T ss_pred ccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCC
Confidence 99999985433 3345555 999999999999876654443 44 5999999999999864 3444544 4
Q ss_pred CCCCEEEcCCCcCcccCC----ccccCccCCCEEeccCCcCcccc-------chhhcCCCCCCEEECCCCccccccCc
Q 036034 238 SKLMELELGNNLLRGSIP----SEIGKLQELYYLDLSHNFINGKI-------LSELGAIPSIDTVDLSMNNLSGSIPK 304 (482)
Q Consensus 238 ~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~l~~n~l~~~~-------~~~~~~~~~L~~l~l~~n~l~~~~p~ 304 (482)
++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.+|+++|++.+..+.
T Consensus 225 ~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 225 NHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp TTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 699999999999986544 33467899999999999954332 23456678899999999999876544
No 85
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=6.3e-23 Score=185.90 Aligned_cols=206 Identities=16% Similarity=0.188 Sum_probs=163.9
Q ss_pred cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCc-ceeccCccccCCCCCCEEEccC-CcccccCCcc
Q 036034 19 GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNH-INVSIPLEIGNLNFLQVLDLSG-NEIRGSIPST 96 (482)
Q Consensus 19 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~~~~~~~~~ 96 (482)
..+|. +. ++|++|++++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |.++...+..
T Consensus 24 ~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 24 QRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred cccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 35666 43 489999999999998888889999999999999997 8866667899999999999998 9998777788
Q ss_pred CcCCCCCCEEeCcCCcccccCCccccCCCCCC---EEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCC-EEE
Q 036034 97 FGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLT---TLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIR-ILD 172 (482)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~---~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~-~L~ 172 (482)
|..+++|++|++++|++++ +|. +..+++|+ +|++++|. .+++..+..+..+++|+ .|+
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~----------------~l~~i~~~~~~~l~~L~~~L~ 162 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNP----------------YMTSIPVNAFQGLCNETLTLK 162 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCT----------------TCCEECTTTTTTTBSSEEEEE
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCc----------------chhhcCcccccchhcceeEEE
Confidence 9999999999999999985 665 77777777 66555540 44444556688888999 999
Q ss_pred ccCCccccCCCcCCcCCCCCCEEeccCCc-cccccCccCcCC-CCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCc
Q 036034 173 LSENKLVGPIPSSVGHLTQLNTLNMYSNQ-INGSIPLEIGNL-KRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNL 249 (482)
Q Consensus 173 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 249 (482)
+++|.++ .+|......++|+.|++++|. +++..+..+..+ ++|+.|++++|++++ +|.. .+++|+.|+++++.
T Consensus 163 l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 163 LYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred cCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 9999988 455443334789999999995 886666778888 899999999999874 4443 67889999988763
No 86
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=3.4e-25 Score=228.38 Aligned_cols=299 Identities=12% Similarity=0.080 Sum_probs=229.1
Q ss_pred CCCCCCEEeccCCcccc----CCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcce---eccCccccC
Q 036034 3 RLRNLVHLDLSDNYLWG----YIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHIN---VSIPLEIGN 75 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~ 75 (482)
.+++|++|++++|.+++ .++..+..+++|++|++++|.+.+ ++..+.++++|++|+++..... ...+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 47899999999999863 334456678999999999999885 6788999999999999864433 234456788
Q ss_pred CCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCc--------ccccCcCE
Q 036034 76 LNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLIN--------ASLVNLTS 146 (482)
Q Consensus 76 l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~--------~~~~~L~~ 146 (482)
+++|+.|+++++.. ..+|..+..+++|++|++++|.+++... ..+..+++|++|++. +.+. ..+++|+.
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 89999999998643 3678888889999999999999765443 346889999999998 4443 23689999
Q ss_pred EEccc-----------Ceeccc-CCccCcCCCCCCEEEccCCccccCCCcCCcC-CCCCCEEecc----CCccccc----
Q 036034 147 LSLHY-----------NNLTGP-IPSTLGHLNRIRILDLSENKLVGPIPSSVGH-LTQLNTLNMY----SNQINGS---- 205 (482)
Q Consensus 147 L~l~~-----------n~~~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~n~l~~~---- 205 (482)
|++++ +.+++. ++.....+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 99993 556543 2233455899999999989888765555655 8899999996 5667653
Q ss_pred -cCccCcCCCCCCeeeccCCc--ccCCCCccCc-CCCCCCEEEcCCCcCccc-CCccccCccCCCEEeccCCcCccccch
Q 036034 206 -IPLEIGNLKRVEAVKLYDNK--LDGPIPPELM-NCSKLMELELGNNLLRGS-IPSEIGKLQELYYLDLSHNFINGKILS 280 (482)
Q Consensus 206 -~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~-~~~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~ 280 (482)
++..+..+++|+.|++++|. +++..+..+. .+++|++|++++|.+++. ++..+..+++|++|++++|++++..+.
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 33335678999999997644 5544444443 489999999999998863 455567889999999999998765444
Q ss_pred -hhcCCCCCCEEECCCCccccccCc
Q 036034 281 -ELGAIPSIDTVDLSMNNLSGSIPK 304 (482)
Q Consensus 281 -~~~~~~~L~~l~l~~n~l~~~~p~ 304 (482)
....+++|+.|++++|++++....
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~~~~ 531 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMTGQD 531 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTTCTT
T ss_pred HHHHhcCccCeeECcCCcCCHHHHH
Confidence 346789999999999999876433
No 87
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.1e-22 Score=184.28 Aligned_cols=185 Identities=21% Similarity=0.233 Sum_probs=115.0
Q ss_pred cCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCc-ccccCCccCcCCCCCCEEeCcC-CcccccCCccc
Q 036034 44 NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNE-IRGSIPSTFGHLKRLKSLDLSQ-NKLVGPIPSSL 121 (482)
Q Consensus 44 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-~~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l 121 (482)
.+|. +. ++|++|++++|++++..+..|.++++|++|++++|. ++...+..|..+++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5555 32 478888888888876666677888888888888886 7665666777888888888887 77776555667
Q ss_pred cCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCC---EEEccCC-ccccCCCcCCcCCCCCC-EEe
Q 036034 122 GHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIR---ILDLSEN-KLVGPIPSSVGHLTQLN-TLN 196 (482)
Q Consensus 122 ~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~ 196 (482)
.++++|++|++++|.+. + +|. +..+.+|+ .|++++| .+.+..+..+..+++|+ .|+
T Consensus 102 ~~l~~L~~L~l~~n~l~-----------------~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~ 162 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLK-----------------M-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLK 162 (239)
T ss_dssp ECCTTCCEEEEEEECCC-----------------S-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEE
T ss_pred CCCCCCCEEeCCCCCCc-----------------c-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEE
Confidence 77777766666655442 1 333 55555565 7777777 66654445566666666 666
Q ss_pred ccCCccccccCccCcCCCCCCeeeccCCc-ccCCCCccCcCC-CCCCEEEcCCCcCc
Q 036034 197 MYSNQINGSIPLEIGNLKRVEAVKLYDNK-LDGPIPPELMNC-SKLMELELGNNLLR 251 (482)
Q Consensus 197 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~-~~L~~L~l~~n~l~ 251 (482)
+++|.++ .+|......++|+.|++++|+ +++..+..+..+ ++|+.|++++|.++
T Consensus 163 l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 163 LYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred cCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 6666665 333332222455555555553 443333444444 55555555555554
No 88
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=4.8e-23 Score=194.27 Aligned_cols=228 Identities=19% Similarity=0.207 Sum_probs=170.5
Q ss_pred CCCCEEeccCCccccCCCc---ccCCCCCCCEEeCcCCcccccCCccc--cCCCCCCeeecccCcceeccC----ccccC
Q 036034 5 RNLVHLDLSDNYLWGYIPP---TLGRLSKLENLHLSSNSLVGNIPSTL--GHLTQLTTLAIASNHINVSIP----LEIGN 75 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~----~~~~~ 75 (482)
..++.+.+.++.++..... .+..+++|++|++++|.+++..|..+ .++++|++|++++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3478888888877532111 12235779999999999999999988 899999999999999987544 44567
Q ss_pred CCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCccccc--C--CccccCCCCCCEEEcccccCcccccCcCEEEccc
Q 036034 76 LNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGP--I--PSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHY 151 (482)
Q Consensus 76 l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~--~--~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~ 151 (482)
+++|++|+|++|.+.+..+..++.+++|++|++++|++.+. + +..+..+++|++|++++|.++..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l----------- 212 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP----------- 212 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-----------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-----------
Confidence 99999999999999988889999999999999999997642 2 23357899999999988877420
Q ss_pred CeecccCCc-cCcCCCCCCEEEccCCccccCCCcCCcCC---CCCCEEeccCCccccccCccCcCCCCCCeeeccCCccc
Q 036034 152 NNLTGPIPS-TLGHLNRIRILDLSENKLVGPIPSSVGHL---TQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLD 227 (482)
Q Consensus 152 n~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 227 (482)
. ..+. .+..+++|++|++++|.+.+..|..+..+ ++|++|++++|.++ .+|..+. ++|+.|++++|+++
T Consensus 213 ---~-~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 213 ---T-GVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLN 285 (310)
T ss_dssp ---H-HHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCC
T ss_pred ---H-HHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCC
Confidence 0 0111 23456777777777777776666666555 57788888888777 5666654 67888888888877
Q ss_pred CCCCccCcCCCCCCEEEcCCCcCcc
Q 036034 228 GPIPPELMNCSKLMELELGNNLLRG 252 (482)
Q Consensus 228 ~~~~~~~~~~~~L~~L~l~~n~l~~ 252 (482)
+. |. +..+++|+.|++++|.+++
T Consensus 286 ~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 286 RA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CC-ch-hhhCCCccEEECcCCCCCC
Confidence 53 22 5667888888888888764
No 89
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=6.8e-22 Score=180.41 Aligned_cols=179 Identities=25% Similarity=0.322 Sum_probs=114.4
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+.++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3567777777775 4555543 577777777777777666677777777777777777776666667777777777777
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL 165 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l 165 (482)
+|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+ ++..+..+..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-----------------~~~~~~~~~~l 154 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-----------------QSIPAGAFDKL 154 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------CCCCTTTTTTC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC-----------------CccCHHHcCcC
Confidence 7777766666667777777777777777654444455555555555444333 22333345556
Q ss_pred CCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCcccc
Q 036034 166 NRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQING 204 (482)
Q Consensus 166 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 204 (482)
++|+.|++++|.+.+..+..+..+++|+.|++++|.+..
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 666666666666654444455555666666666665543
No 90
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=4.6e-22 Score=187.13 Aligned_cols=195 Identities=24% Similarity=0.379 Sum_probs=132.0
Q ss_pred cCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCC
Q 036034 25 LGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLK 104 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 104 (482)
+..+++|++|++++|.++. ++ .+..+++|++|++++|.++.. +. +..+++|++|++++|.+++ + ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-V-SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-c-hhhcCCCCCC
Confidence 3456777888888877773 44 577778888888888877743 33 7777888888888887764 3 3577778888
Q ss_pred EEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc
Q 036034 105 SLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS 184 (482)
Q Consensus 105 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 184 (482)
+|++++|++++. + .+..+++|++|++++|.+.. . +. +..+++|+.|++++|.+++ ++.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~-----------------~-~~-l~~l~~L~~L~l~~n~l~~-~~~ 168 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITN-----------------I-SP-LAGLTNLQYLSIGNAQVSD-LTP 168 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCC-----------------C-GG-GGGCTTCCEEECCSSCCCC-CGG
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCc-----------------C-cc-ccCCCCccEEEccCCcCCC-Chh
Confidence 888888877653 2 36677777777666655432 1 11 5566777777777777764 333
Q ss_pred CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcc
Q 036034 185 SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRG 252 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 252 (482)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+.. .+..+++|+.|++++|.+++
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 6677777777777777764332 666777777777777776543 26677778888888877763
No 91
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.1e-21 Score=177.19 Aligned_cols=177 Identities=23% Similarity=0.330 Sum_probs=98.5
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCc
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~ 109 (482)
..++++++++.++ .+|..+. ++++.|++++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4567777777777 5555443 567777777777776666667777777777777777776666666777777777777
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHL 189 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 189 (482)
+|++++..+..+..+++|++|++++|.+ ++..+..+..+++|+.|++++|.+++..+..+..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l-----------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQL-----------------KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcC-----------------CCcChhHhccCCcccEEECcCCcCCccCHHHcCcC
Confidence 7776654444455555554444443332 22223334445555555555555543333344444
Q ss_pred CCCCEEeccCCccccccCccCcCCCCCCeeeccCCcc
Q 036034 190 TQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKL 226 (482)
Q Consensus 190 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 226 (482)
++|+.|++++|.+++..+..+..+++|+.|++++|++
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 5555555555544433333333333333333333333
No 92
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5e-22 Score=186.88 Aligned_cols=211 Identities=25% Similarity=0.389 Sum_probs=153.3
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcC
Q 036034 31 LENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQ 110 (482)
Q Consensus 31 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~ 110 (482)
+..+.+..+.+.+.+ .+..+++|++|++++|.++. ++ .+..+++|++|++++|.+++. +. +..+++|++|++++
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccC
Confidence 334445555555432 24567888888888888874 44 577888888888888888754 33 88888888888888
Q ss_pred CcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCC
Q 036034 111 NKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLT 190 (482)
Q Consensus 111 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 190 (482)
|++.+. ..+..+++|++|++++|.+.. ++ .+..+++|+.|++++|.+++. +. +..++
T Consensus 95 n~l~~~--~~~~~l~~L~~L~l~~n~l~~------------------~~-~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~ 151 (308)
T 1h6u_A 95 NPLKNV--SAIAGLQSIKTLDLTSTQITD------------------VT-PLAGLSNLQVLYLDLNQITNI-SP-LAGLT 151 (308)
T ss_dssp CCCSCC--GGGTTCTTCCEEECTTSCCCC------------------CG-GGTTCTTCCEEECCSSCCCCC-GG-GGGCT
T ss_pred CcCCCc--hhhcCCCCCCEEECCCCCCCC------------------ch-hhcCCCCCCEEECCCCccCcC-cc-ccCCC
Confidence 888753 357777777777766665432 22 267788888888888888743 33 77888
Q ss_pred CCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEecc
Q 036034 191 QLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLS 270 (482)
Q Consensus 191 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 270 (482)
+|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++.. .+..+++|+.|+++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEcc
Confidence 88888888888875333 7788888888888888875432 677888888888888887544 37788888888888
Q ss_pred CCcCcc
Q 036034 271 HNFING 276 (482)
Q Consensus 271 ~n~l~~ 276 (482)
+|++.+
T Consensus 226 ~N~i~~ 231 (308)
T 1h6u_A 226 NQTITN 231 (308)
T ss_dssp EEEEEC
T ss_pred CCeeec
Confidence 888865
No 93
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.4e-22 Score=175.70 Aligned_cols=161 Identities=25% Similarity=0.285 Sum_probs=96.8
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
++|++|++++|.+++..+..|..+++|++|++++|++++..+..|.++++|++|++++|++++..+..+.++++|++|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 45666666666665544455566666666666666666554555566666666666666666444444566666666666
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcC
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGH 164 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~ 164 (482)
++|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+...+++|+.|++..|+++|.+|..++.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHHHHHHHHhCCceeeccCcc
Confidence 66666654455556666666666666666654444456666666666666666555555555555555555555554443
Q ss_pred C
Q 036034 165 L 165 (482)
Q Consensus 165 l 165 (482)
+
T Consensus 188 l 188 (208)
T 2o6s_A 188 V 188 (208)
T ss_dssp B
T ss_pred c
Confidence 3
No 94
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=2e-24 Score=222.80 Aligned_cols=314 Identities=13% Similarity=0.163 Sum_probs=142.3
Q ss_pred CCCCCEEeccCCccccCCCcccC-CCCCCCEEeCcCC-ccccc-CCccccCCCCCCeeecccCcceeccCccc----cCC
Q 036034 4 LRNLVHLDLSDNYLWGYIPPTLG-RLSKLENLHLSSN-SLVGN-IPSTLGHLTQLTTLAIASNHINVSIPLEI----GNL 76 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~----~~l 76 (482)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .+++. ++..+.++++|++|++++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 45566666666655544444443 3556666666665 33321 23333456666666666666554322222 244
Q ss_pred CCCCEEEccCCc--ccc-cCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEccccc-----------------
Q 036034 77 NFLQVLDLSGNE--IRG-SIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNL----------------- 136 (482)
Q Consensus 77 ~~L~~L~L~~n~--~~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~----------------- 136 (482)
++|++|++++|. +.. .++..+..+++|++|++++|.....++..+..+++|++|++..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 566666666554 111 011112334666666666652111133333444444444432221
Q ss_pred ---------C--------c---ccccCcCEEEcccCeecccC-CccCcCCCCCCEEEccCCccccC-CCcCCcCCCCCCE
Q 036034 137 ---------I--------N---ASLVNLTSLSLHYNNLTGPI-PSTLGHLNRIRILDLSENKLVGP-IPSSVGHLTQLNT 194 (482)
Q Consensus 137 ---------i--------~---~~~~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~ 194 (482)
+ . ..+++|+.|++++|.+++.. ...+..+++|+.|++++| +.+. ++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 0 0 02467777777777765432 222445677777777766 3211 1111223566666
Q ss_pred EeccC---------CccccccCccCc-CCCCCCeeeccCCcccCCCCccCc-CCCCCCEEEcC--C----CcCccc----
Q 036034 195 LNMYS---------NQINGSIPLEIG-NLKRVEAVKLYDNKLDGPIPPELM-NCSKLMELELG--N----NLLRGS---- 253 (482)
Q Consensus 195 L~l~~---------n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~-~~~~L~~L~l~--~----n~l~~~---- 253 (482)
|++.. +.+++.....+. .+++|+.|.+..|.+++.....+. .+++|+.|+++ + +.+++.
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 66622 233322111221 245555555555555433332232 34555555555 2 233311
Q ss_pred -CCccccCccCCCEEeccCCcCccccchhhcC-CCCCCEEECCCCccccccC----ccCCCCCeEeccCCcC
Q 036034 254 -IPSEIGKLQELYYLDLSHNFINGKILSELGA-IPSIDTVDLSMNNLSGSIP----KSVRKVPHLDVLGNNL 319 (482)
Q Consensus 254 -~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-~~~L~~l~l~~n~l~~~~p----~~~~~l~~l~~~~n~~ 319 (482)
++..+..+++|+.|++++ .+.+..+..+.. +++|+.|++++|.+++..+ ..+.+++.+++++|++
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 011133344555555544 333333333332 4455555555555443322 1234455555555544
No 95
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=8.2e-21 Score=168.06 Aligned_cols=179 Identities=22% Similarity=0.261 Sum_probs=113.1
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|.++++|++|++++|+++...+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56777777775 345443 357888888888887666666777888888888888777555555677777888888777
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCC
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNR 167 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~ 167 (482)
.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+ ++..+..+..+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l-----------------~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL-----------------KSVPDGVFDRLTS 149 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----------------SCCCTTTTTTCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc-----------------ceeCHHHhccCCC
Confidence 77755555667777777777777777655444455555555555544433 2233334555566
Q ss_pred CCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCC
Q 036034 168 IRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNL 213 (482)
Q Consensus 168 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 213 (482)
|+.|++++|.+.+ .+++|+.|+++.|.++|.+|.+++.+
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 6666666665432 23455555555555555555555443
No 96
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.2e-20 Score=180.91 Aligned_cols=122 Identities=18% Similarity=0.098 Sum_probs=73.8
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccC-ccccCCCCCCE-EEcc
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIP-LEIGNLNFLQV-LDLS 85 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~-L~L~ 85 (482)
++++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|++ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666665 455544 3567777777777775555567777777777777777654333 45666666554 4455
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEc
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNM 132 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 132 (482)
.|+++...|+.|..+++|++|++++|++....+..+....++..+++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 56666555666666777777777777666444434444444444444
No 97
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=1.5e-20 Score=180.27 Aligned_cols=244 Identities=18% Similarity=0.169 Sum_probs=172.6
Q ss_pred CEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCC-ccCcCCCCCCE-EeCc
Q 036034 32 ENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIP-STFGHLKRLKS-LDLS 109 (482)
Q Consensus 32 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~-L~L~ 109 (482)
++++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|.+.+.+| .+|.+++++.+ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888888998 677666 3689999999999996656789999999999999999866554 57888998776 6667
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccC-CccccCCCcCCcC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSE-NKLVGPIPSSVGH 188 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~ 188 (482)
+|++....|..|..+++|++|++++|.+.. ..+..+....++..|++.+ +.+....+..+..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-----------------~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-----------------LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSS-----------------CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred CCcccccCchhhhhcccccccccccccccc-----------------CCchhhcccchhhhhhhccccccccccccchhh
Confidence 789988778889999999998888776642 2333444555667777754 4555444445555
Q ss_pred C-CCCCEEeccCCccccccCccCcCCCCCCeeeccC-CcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCE
Q 036034 189 L-TQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYD-NKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYY 266 (482)
Q Consensus 189 l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 266 (482)
+ ..++.|++++|.++ .++.......+|+.+++.+ |.++...+..|..+++|+.|++++|.++. +|.. .+.+|+.
T Consensus 152 ~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~-lp~~--~~~~L~~ 227 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSY--GLENLKK 227 (350)
T ss_dssp SBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC-CCSS--SCTTCCE
T ss_pred cchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc-cChh--hhccchH
Confidence 5 35777888888887 4555555567788888875 44543333467788888888888888874 4432 2456666
Q ss_pred EeccCCcCccccchhhcCCCCCCEEECCCCcccc
Q 036034 267 LDLSHNFINGKILSELGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 267 L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 300 (482)
|.+.++.-....| .+..+++|+.++++++...+
T Consensus 228 L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~c~ 260 (350)
T 4ay9_X 228 LRARSTYNLKKLP-TLEKLVALMEASLTYPSHCC 260 (350)
T ss_dssp EECTTCTTCCCCC-CTTTCCSCCEEECSCHHHHH
T ss_pred hhhccCCCcCcCC-CchhCcChhhCcCCCCcccc
Confidence 6665554333444 46778888888887654443
No 98
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.84 E-value=3e-23 Score=213.98 Aligned_cols=315 Identities=15% Similarity=0.164 Sum_probs=215.4
Q ss_pred CCCCCCEEeccCC-ccccC-CCcccCCCCCCCEEeCcCCcccccCCccc----cCCCCCCeeecccCc--cee-ccCccc
Q 036034 3 RLRNLVHLDLSDN-YLWGY-IPPTLGRLSKLENLHLSSNSLVGNIPSTL----GHLTQLTTLAIASNH--INV-SIPLEI 73 (482)
Q Consensus 3 ~l~~L~~L~l~~n-~~~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~l~~n~--l~~-~~~~~~ 73 (482)
.+++|++|+|++| .+++. ++..+..+++|++|+|++|.+++..+..+ ..+++|++|++++|. ++. .++..+
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~ 207 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLV 207 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHH
Confidence 4789999999998 55432 34444578999999999998776544433 367799999999886 321 122223
Q ss_pred cCCCCCCEEEccCC-cccccCCccCcCCCCCCEEeCcCCc--------------------------cc----ccCCcccc
Q 036034 74 GNLNFLQVLDLSGN-EIRGSIPSTFGHLKRLKSLDLSQNK--------------------------LV----GPIPSSLG 122 (482)
Q Consensus 74 ~~l~~L~~L~L~~n-~~~~~~~~~l~~l~~L~~L~L~~n~--------------------------l~----~~~~~~l~ 122 (482)
..+++|++|++++| .+. .++..+..+++|++|++..+. +. ..++..+.
T Consensus 208 ~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~ 286 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS 286 (594)
T ss_dssp HHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH
T ss_pred HhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH
Confidence 45788999999988 443 366666777777777765442 11 12333334
Q ss_pred CCCCCCEEEcccccCcc--------cccCcCEEEcccCeeccc-CCccCcCCCCCCEEEccC---------CccccCCCc
Q 036034 123 HLTQLTTLNMRSNLINA--------SLVNLTSLSLHYNNLTGP-IPSTLGHLNRIRILDLSE---------NKLVGPIPS 184 (482)
Q Consensus 123 ~l~~L~~L~l~~n~i~~--------~~~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~---------n~l~~~~~~ 184 (482)
.+++|++|++++|.+.. .+++|+.|++++| +++. ++.....+++|+.|++.+ +.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 67899999999998653 4789999999988 4422 223333578899998843 344332222
Q ss_pred CC-cCCCCCCEEeccCCccccccCccCc-CCCCCCeeecc--C----CcccCC-----CCccCcCCCCCCEEEcCCCcCc
Q 036034 185 SV-GHLTQLNTLNMYSNQINGSIPLEIG-NLKRVEAVKLY--D----NKLDGP-----IPPELMNCSKLMELELGNNLLR 251 (482)
Q Consensus 185 ~~-~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~--~----n~l~~~-----~~~~~~~~~~L~~L~l~~n~l~ 251 (482)
.+ ..+++|+.|.+..|.+++..+..+. .+++|+.|++. + +.+++. ++..+..+++|+.|++++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 22 2478999998888888776555554 57899999998 3 444421 112256688999999977 666
Q ss_pred ccCCccccC-ccCCCEEeccCCcCccccchhh-cCCCCCCEEECCCCccccccCc----cCCCCCeEeccCCcCc
Q 036034 252 GSIPSEIGK-LQELYYLDLSHNFINGKILSEL-GAIPSIDTVDLSMNNLSGSIPK----SVRKVPHLDVLGNNLE 320 (482)
Q Consensus 252 ~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~-~~~~~L~~l~l~~n~l~~~~p~----~~~~l~~l~~~~n~~~ 320 (482)
+..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|++++..+. .+.+++.+++++|+++
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 555555554 7889999999999877666555 6689999999999998654332 3567889999988773
No 99
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=2.9e-20 Score=187.49 Aligned_cols=187 Identities=25% Similarity=0.406 Sum_probs=114.6
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCc
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~ 109 (482)
+|+.|+|++|++++ +|..+ .++|++|+|++|+++ .+| ..+++|++|+|++|.+++ +|. +.. +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 67777777777764 55544 266777777777776 455 345677777777777765 555 544 77777777
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHL 189 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 189 (482)
+|++++ +|. .+++|++|++++|.+ ++ +|. .+++|+.|++++|.+++ +|. +.
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l-----------------~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-- 179 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQL-----------------TM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-- 179 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCC-----------------SC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--
T ss_pred CCcCCC-CCC---cCccccEEeCCCCcc-----------------Cc-CCC---cCCCcCEEECCCCCCCC-cch-hh--
Confidence 777764 444 345555555544443 22 332 34556666666666654 444 43
Q ss_pred CCCCEEeccCCccccccCccCcCCCCC-------CeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCc
Q 036034 190 TQLNTLNMYSNQINGSIPLEIGNLKRV-------EAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKL 261 (482)
Q Consensus 190 ~~L~~L~l~~n~l~~~~~~~~~~l~~L-------~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 261 (482)
++|+.|++++|.++ .+|. +.. +| +.|++++|.++ .+|..+..+++|+.|++++|.+++.+|..+..+
T Consensus 180 ~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 180 ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 56666666666666 4444 433 45 77777777776 466666667777777777777777666665554
No 100
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=5.7e-20 Score=185.39 Aligned_cols=187 Identities=24% Similarity=0.370 Sum_probs=141.1
Q ss_pred CCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcc
Q 036034 54 QLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMR 133 (482)
Q Consensus 54 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 133 (482)
+|+.|++++|.+++ +|..+. ++|++|+|++|.++ .+| ..+++|++|++++|++++ +|. +.+ +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 88899999998885 666553 78999999999888 566 457889999999998886 565 543 55555555
Q ss_pred cccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCC
Q 036034 134 SNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNL 213 (482)
Q Consensus 134 ~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 213 (482)
+| .+++ +|. .+++|+.|++++|.+++ +|. .+++|+.|++++|.+++ +|. +.
T Consensus 129 ~N-----------------~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-- 179 (571)
T 3cvr_A 129 NN-----------------QLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-- 179 (571)
T ss_dssp SS-----------------CCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--
T ss_pred CC-----------------cCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--
Confidence 44 4443 444 56888999999998885 555 56788999999998886 666 55
Q ss_pred CCCCeeeccCCcccCCCCccCcCCCCC-------CEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCC
Q 036034 214 KRVEAVKLYDNKLDGPIPPELMNCSKL-------MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAI 285 (482)
Q Consensus 214 ~~L~~L~l~~n~l~~~~~~~~~~~~~L-------~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 285 (482)
++|+.|++++|.++ .+|. +.. +| +.|++++|.++ .+|..+..+++|+.|++++|++++.+|..+..+
T Consensus 180 ~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 180 ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 88899999999888 5565 543 66 88999999888 578778788899999999999888877776553
No 101
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.3e-19 Score=168.84 Aligned_cols=173 Identities=25% Similarity=0.427 Sum_probs=112.2
Q ss_pred cCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCC
Q 036034 25 LGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLK 104 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 104 (482)
+..+++|++|++++|.+.+. + .+..+++|++|++++|++++..+ +..+++|++|++++|.+++ + ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCC
Confidence 34567777777777777743 3 36777777778887777775333 7777778888888777764 2 3377777788
Q ss_pred EEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc
Q 036034 105 SLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS 184 (482)
Q Consensus 105 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 184 (482)
+|++++|++++. ..+..+++|++|++++|.+.. . ..+..+++|+.|++++|.+.+..+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~-----------------~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-----------------I--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-----------------C--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-----------------c--hhhccCCCCCEEEccCCccccchh-
Confidence 888888777642 456666666666666655432 1 345556666666666666654322
Q ss_pred CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC
Q 036034 185 SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG 228 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 228 (482)
+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++..
T Consensus 174 -l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 5666666666666666654 22 35666666677776666654
No 102
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.8e-19 Score=183.79 Aligned_cols=172 Identities=26% Similarity=0.431 Sum_probs=87.2
Q ss_pred CCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCE
Q 036034 26 GRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKS 105 (482)
Q Consensus 26 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 105 (482)
..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|.+++..| +..+++|++|+|++|.+.+ +| .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 345555555555555552 22 35555555555555555553222 5555555555555555542 22 4555555555
Q ss_pred EeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcC
Q 036034 106 LDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSS 185 (482)
Q Consensus 106 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 185 (482)
|+|++|++.+. ..+..+++|+.|+|++|.+ ++. ..+..+++|+.|+|++|.+.+..|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l-----------------~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKI-----------------TDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCC-----------------CCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCcc-----------------CCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 55555555431 2344444444444433332 221 344555666666666666654333
Q ss_pred CcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccC
Q 036034 186 VGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDG 228 (482)
Q Consensus 186 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 228 (482)
+..+++|+.|+|++|.+++. ..+..+++|+.|++++|++.+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55556666666666655532 235555555555555555543
No 103
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=8.7e-19 Score=156.17 Aligned_cols=123 Identities=24% Similarity=0.268 Sum_probs=68.1
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45556666554 3444332 45666666666666555555666666666666666665555555666666666666666
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcc
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMR 133 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 133 (482)
.++...+..|..+++|++|+|++|++++..|..|..+++|++|+++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 136 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY 136 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECC
Confidence 6654444445555556666665555554444444444444444433
No 104
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=4.7e-19 Score=180.72 Aligned_cols=172 Identities=27% Similarity=0.409 Sum_probs=141.9
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.|++|+.|++++|.+.. ++ .+..+++|+.|+|++|.+++..+ +.++++|+.|+|++|.+++ +| .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 46889999999999964 44 58899999999999999996554 8999999999999999985 44 78999999999
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL 162 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~ 162 (482)
+|++|.+.+ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+. +..| +
T Consensus 115 ~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-----------------~~~~--l 171 (605)
T 1m9s_A 115 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS-----------------DIVP--L 171 (605)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC-----------------CCGG--G
T ss_pred EecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC-----------------Cchh--h
Confidence 999999985 3 5689999999999999999864 67788888888777766554 3333 6
Q ss_pred cCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccc
Q 036034 163 GHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGS 205 (482)
Q Consensus 163 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 205 (482)
..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+.+.
T Consensus 172 ~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 172 AGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp TTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred ccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 7788888888888888753 4577888888888888888754
No 105
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=4.3e-19 Score=170.80 Aligned_cols=176 Identities=23% Similarity=0.220 Sum_probs=86.6
Q ss_pred CEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCcccc-CCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcC
Q 036034 32 ENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIG-NLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQ 110 (482)
Q Consensus 32 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~ 110 (482)
++++++++.++ .+|..+. +.++.|+|++|+++...+..+. ++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 34555555554 3343322 2345555555555544444444 555555555555555544444555555555555555
Q ss_pred CcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCC---c
Q 036034 111 NKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSV---G 187 (482)
Q Consensus 111 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~ 187 (482)
|++....+..|..+++|++|++++|.+ ++..+..+..+++|+.|+|++|.+++..+..+ .
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i-----------------~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 160 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHI-----------------VVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGN 160 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCC-----------------CEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC---
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcc-----------------cEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcc
Confidence 555544444455555554444443332 22334445555555555555555553222222 3
Q ss_pred CCCCCCEEeccCCccccccCccCcCCCC--CCeeeccCCccc
Q 036034 188 HLTQLNTLNMYSNQINGSIPLEIGNLKR--VEAVKLYDNKLD 227 (482)
Q Consensus 188 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~ 227 (482)
.+++|+.|+|++|.+++..+..+..++. ++.|++++|.+.
T Consensus 161 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 161 KLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 4566666666666665433344444444 356667766664
No 106
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=154.58 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=64.3
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCC-ccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIP-STLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
+.+++++|.++ .+|..+. ..+++|+|++|++++..+ ..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 45566666654 3444332 345566666666655433 3355556666666666665554444555555555555555
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEE
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLN 131 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 131 (482)
|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 555554445555555555555555555544444444444444333
No 107
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=3.3e-19 Score=166.12 Aligned_cols=189 Identities=28% Similarity=0.374 Sum_probs=134.0
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcC
Q 036034 31 LENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQ 110 (482)
Q Consensus 31 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~ 110 (482)
+..+.+..+.+.+.. .+..+++|++|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 444556666655432 24567788888888888774 33 47778888888888888875433 77888888888888
Q ss_pred CcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCC
Q 036034 111 NKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLT 190 (482)
Q Consensus 111 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 190 (482)
|.+++ + ..+..+++|++|++++|.+.. + ..+..+++|+.|++++|.+++. ..+..++
T Consensus 100 n~l~~-~-~~l~~l~~L~~L~L~~n~i~~------------------~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~ 156 (291)
T 1h6t_A 100 NKVKD-L-SSLKDLKKLKSLSLEHNGISD------------------I-NGLVHLPQLESLYLGNNKITDI--TVLSRLT 156 (291)
T ss_dssp SCCCC-G-GGGTTCTTCCEEECTTSCCCC------------------C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCT
T ss_pred CcCCC-C-hhhccCCCCCEEECCCCcCCC------------------C-hhhcCCCCCCEEEccCCcCCcc--hhhccCC
Confidence 88774 2 346777777777666665532 1 3466677888888888888753 5677788
Q ss_pred CCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcc
Q 036034 191 QLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRG 252 (482)
Q Consensus 191 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 252 (482)
+|+.|++++|.+++..+ +..+++|+.|++++|.+++ ++ .+..+++|+.|++++|.++.
T Consensus 157 ~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 157 KLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 88888888888876444 7778888888888888875 33 47778888888888887764
No 108
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.2e-18 Score=153.52 Aligned_cols=153 Identities=21% Similarity=0.253 Sum_probs=111.7
Q ss_pred CEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCC
Q 036034 145 TSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDN 224 (482)
Q Consensus 145 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 224 (482)
+.++++++.++ .+|..+. ++++.|++++|.+.+..+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3454443 56778888888777666667777778888888888877766777777788888888888
Q ss_pred cccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccc
Q 036034 225 KLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 225 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 300 (482)
.++...+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.+++++|++.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7775555556777888888888888877777777777888888888888877666667777788888888777765
No 109
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.5e-18 Score=153.22 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=112.2
Q ss_pred CEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCC-cCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccC
Q 036034 145 TSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIP-SSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYD 223 (482)
Q Consensus 145 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 223 (482)
+.+++++|.++ .+|..+. ..++.|++++|.+++..+ ..+..+++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35566666665 3454442 345778888887775543 3467777788888888877766666777777888888888
Q ss_pred CcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccccc
Q 036034 224 NKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 224 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 302 (482)
|.+++..+..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.+++++|++.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 8877666666777788888888888887777777777788888888888887776777777788888888888777543
No 110
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=9.1e-19 Score=153.34 Aligned_cols=154 Identities=19% Similarity=0.315 Sum_probs=112.9
Q ss_pred CCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCE
Q 036034 26 GRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKS 105 (482)
Q Consensus 26 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 105 (482)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55678888888888887 555 5778888888888888664 3346778888888888888888777778888888888
Q ss_pred EeCcCCcccccCCccccCCCCCCEEEccccc-CcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc
Q 036034 106 LDLSQNKLVGPIPSSLGHLTQLTTLNMRSNL-INASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS 184 (482)
Q Consensus 106 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 184 (482)
|++++|++++..|..++.+++|++|++++|. +. .+| .+..+++|+.|++++|.+++ ++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~------------------~~~-~l~~l~~L~~L~l~~n~i~~-~~- 175 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT------------------DIM-PLKTLPELKSLNIQFDGVHD-YR- 175 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC------------------CCG-GGGGCSSCCEEECTTBCCCC-CT-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc------------------ccH-hhcCCCCCCEEECCCCCCcC-hH-
Confidence 8888888887677778888888777777665 32 222 46667778888888887764 33
Q ss_pred CCcCCCCCCEEeccCCcccc
Q 036034 185 SVGHLTQLNTLNMYSNQING 204 (482)
Q Consensus 185 ~~~~l~~L~~L~l~~n~l~~ 204 (482)
.+..+++|+.|++++|++.+
T Consensus 176 ~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 176 GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TGGGCSSCCEEEECBC----
T ss_pred HhccCCCCCEEEeeCcccCC
Confidence 56777888888888887653
No 111
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2.2e-18 Score=154.58 Aligned_cols=145 Identities=26% Similarity=0.313 Sum_probs=91.7
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45666666663 4454432 56666666666666666666666666666666666665444455566666666666666
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-------cccCcCEEEcccCeecc
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-------SLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-------~~~~L~~L~l~~n~~~~ 156 (482)
.+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|.+.. .+++|+.|++++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666555555666666666666666666 456666666666666666666553 24566666777666654
No 112
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.9e-18 Score=166.29 Aligned_cols=176 Identities=27% Similarity=0.267 Sum_probs=109.6
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCcccc-CCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLG-HLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
+.++++++.++ .+|..+. +.+++|+|++|++++..+..|. ++++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46667776664 3555442 4567777777777766666665 677777777777777665556677777777777777
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccC---c
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTL---G 163 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~---~ 163 (482)
|.++...+..|..+++|++|+|++|++.+..|..|..+++|++|++++|.+.. ..+..+ .
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------l~~~~~~~~~ 160 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-----------------FPVELIKDGN 160 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-----------------CCGGGTC---
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-----------------eCHHHhcCcc
Confidence 77766555666777777777777777766666666666666666666555432 111122 4
Q ss_pred CCCCCCEEEccCCccccCCCcCCcCCCC--CCEEeccCCccc
Q 036034 164 HLNRIRILDLSENKLVGPIPSSVGHLTQ--LNTLNMYSNQIN 203 (482)
Q Consensus 164 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~ 203 (482)
.+++|+.|++++|.+....+..+..++. ++.|++++|.+.
T Consensus 161 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 161 KLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 5666777777777776433344555554 366777776654
No 113
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=7.1e-18 Score=151.27 Aligned_cols=155 Identities=21% Similarity=0.215 Sum_probs=120.9
Q ss_pred CEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCC
Q 036034 145 TSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDN 224 (482)
Q Consensus 145 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 224 (482)
+.++++++.++ .+|..+. ++|+.|++++|.+.+..|..+..+++|+.|++++|.+....+..+..+++|+.|++++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44556666555 4554443 77888888888888777778888888888888888887555566778888888888888
Q ss_pred cccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 225 KLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 225 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
.+++..+..+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++.+..+..+..+++|+.+++++|++.+..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888766666788888888888888888 677788888888888888888887666677888888888888888876544
No 114
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.7e-21 Score=197.47 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=141.6
Q ss_pred cCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCc-------------ccccCCccccCCCCCCEEE-cccccCcc
Q 036034 74 GNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNK-------------LVGPIPSSLGHLTQLTTLN-MRSNLINA 139 (482)
Q Consensus 74 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~-------------l~~~~~~~l~~l~~L~~L~-l~~n~i~~ 139 (482)
..+++|+.|+|++|.++ .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45666777777777665 566667777777777765553 3445566677777777776 555433
Q ss_pred cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCee
Q 036034 140 SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAV 219 (482)
Q Consensus 140 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 219 (482)
.+|..+.+++|.++...+ ..|+.|++++|.+++ +|. ++.+++|+.|++++|.++ .+|..++.+++|+.|
T Consensus 423 --~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 491 (567)
T 1dce_A 423 --DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVL 491 (567)
T ss_dssp --HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred --chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEE
Confidence 344555556665553221 247788888888874 565 778888888888888887 677788888888888
Q ss_pred eccCCcccCCCCccCcCCCCCCEEEcCCCcCcccC-CccccCccCCCEEeccCCcCccccch---hhcCCCCCCEEEC
Q 036034 220 KLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSI-PSEIGKLQELYYLDLSHNFINGKILS---ELGAIPSIDTVDL 293 (482)
Q Consensus 220 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~---~~~~~~~L~~l~l 293 (482)
++++|.+++ +| .+..+++|+.|+|++|.+++.. |..++.+++|+.|++++|++.+.++. ....+|+|+.|++
T Consensus 492 ~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 492 QASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 888888875 55 6777888888888888887665 77788888888888888888765442 2334777777753
No 115
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=2e-21 Score=196.95 Aligned_cols=203 Identities=22% Similarity=0.247 Sum_probs=161.2
Q ss_pred cCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCc-------------ccccCCccCcCCCCCCEEe-CcCCcccc
Q 036034 50 GHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNE-------------IRGSIPSTFGHLKRLKSLD-LSQNKLVG 115 (482)
Q Consensus 50 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------~~~~~~~~l~~l~~L~~L~-L~~n~l~~ 115 (482)
..++.|+.|+|++|.++ .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45777888888888886 677788888888888876654 4556677788888888888 6665442
Q ss_pred cCCccccCCCCCCEEEcccccCcc-cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCE
Q 036034 116 PIPSSLGHLTQLTTLNMRSNLINA-SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNT 194 (482)
Q Consensus 116 ~~~~~l~~l~~L~~L~l~~n~i~~-~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 194 (482)
.|..+.+..|.+.. ....|+.|++++|.+++ +|. ++.+++|+.|++++|.++ .+|..++.+++|+.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 490 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEV 490 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred ----------hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCE
Confidence 23334455555543 23457888888888885 566 899999999999999998 78999999999999
Q ss_pred EeccCCccccccCccCcCCCCCCeeeccCCcccCCC-CccCcCCCCCCEEEcCCCcCcccCCcc---ccCccCCCEEec
Q 036034 195 LNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPI-PPELMNCSKLMELELGNNLLRGSIPSE---IGKLQELYYLDL 269 (482)
Q Consensus 195 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~---~~~~~~L~~L~l 269 (482)
|+|++|.+++ +| .++.+++|+.|++++|.+++.. |..+..+++|+.|++++|.+++..|.. +..+++|+.|++
T Consensus 491 L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 491 LQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp EECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999996 66 8999999999999999999876 899999999999999999998765532 244789998864
No 116
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=8.5e-18 Score=147.13 Aligned_cols=152 Identities=15% Similarity=0.243 Sum_probs=114.8
Q ss_pred ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeee
Q 036034 141 LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVK 220 (482)
Q Consensus 141 ~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 220 (482)
+++|+.|++++|.++ .+| .+..+++|+.|++++|.+. .+..+..+++|++|++++|.+++..+..++.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 445555566666666 344 5777888888888888664 335677888888888888888877788888888888888
Q ss_pred ccCCcccCCCCccCcCCCCCCEEEcCCCc-CcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccc
Q 036034 221 LYDNKLDGPIPPELMNCSKLMELELGNNL-LRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 221 l~~n~l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 299 (482)
+++|.+++..+..+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|.+.+.. .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 88888887777778888888888888887 54 445 5788888888888888887532 6777888888888888875
Q ss_pred c
Q 036034 300 G 300 (482)
Q Consensus 300 ~ 300 (482)
+
T Consensus 195 ~ 195 (197)
T 4ezg_A 195 G 195 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 117
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.4e-18 Score=159.28 Aligned_cols=165 Identities=22% Similarity=0.345 Sum_probs=80.5
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
++.++++++.+++. + .+..+++|++|++++|.++ .++ .+..+++|++|++++|++++.. . +..+++|++|++++
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~-~-l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLS-P-LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCCh-h-hccCCCCCEEECCC
Confidence 33445555555432 2 3445555666666665555 233 4555555666666555555322 2 55555555555555
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCC
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLN 166 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~ 166 (482)
|++++ +|. +.. ++|++|++++|++++. ..+..+++|++|++++|.++ +. ..+..++
T Consensus 95 N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~-----------------~~--~~l~~l~ 150 (263)
T 1xeu_A 95 NRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK-----------------SI--VMLGFLS 150 (263)
T ss_dssp SCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC-----------------BC--GGGGGCT
T ss_pred CccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC-----------------CC--hHHccCC
Confidence 55553 222 111 5555555555555432 23444444444444443332 11 1344455
Q ss_pred CCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccc
Q 036034 167 RIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQIN 203 (482)
Q Consensus 167 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 203 (482)
+|+.|++++|.+.+. ..+..+++|+.|++++|.+.
T Consensus 151 ~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 151 KLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp TCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 555555555555433 34445555555555555544
No 118
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=3.2e-17 Score=142.68 Aligned_cols=131 Identities=28% Similarity=0.361 Sum_probs=118.9
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCc-cccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPS-TLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
-+++++++|.++ .+|..+. .+|++|++++|++++..+. .|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378999999995 6777664 4999999999999977765 48999999999999999998889999999999999999
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS 140 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 140 (482)
+|.+++..+..|..+++|++|+|++|++++..|..+..+++|++|++++|.+...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999988888899999999999999999998899999999999999999988654
No 119
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=5.1e-18 Score=155.53 Aligned_cols=168 Identities=24% Similarity=0.371 Sum_probs=93.2
Q ss_pred CCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEe
Q 036034 28 LSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLD 107 (482)
Q Consensus 28 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~ 107 (482)
+.++..++++++.+++.. .+..+++|++|++++|.++ .++ .+..+++|++|+|++|.+++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445566666666666332 4566667777777777666 334 56666677777777776664332 66666666666
Q ss_pred CcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCc
Q 036034 108 LSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVG 187 (482)
Q Consensus 108 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 187 (482)
+++|++++ +|. +.. ++|++|++++ |++++. +.+..+++|+.|++++|++++. + .+.
T Consensus 92 L~~N~l~~-l~~-~~~-~~L~~L~L~~-----------------N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~ 147 (263)
T 1xeu_A 92 VNRNRLKN-LNG-IPS-ACLSRLFLDN-----------------NELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLG 147 (263)
T ss_dssp CCSSCCSC-CTT-CCC-SSCCEEECCS-----------------SCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGG
T ss_pred CCCCccCC-cCc-ccc-CcccEEEccC-----------------CccCCC--hhhcCcccccEEECCCCcCCCC-h-HHc
Confidence 66666653 222 111 3333333333 333321 2355566666666666666532 2 455
Q ss_pred CCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCccc
Q 036034 188 HLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLD 227 (482)
Q Consensus 188 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 227 (482)
.+++|+.|++++|.+++. ..+..+++|+.|++++|.+.
T Consensus 148 ~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 148 FLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp GCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred cCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 566666666666665543 34455555555555555554
No 120
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.2e-17 Score=142.15 Aligned_cols=134 Identities=27% Similarity=0.244 Sum_probs=112.7
Q ss_pred CCCCCCEEeccCCccc-cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 3 RLRNLVHLDLSDNYLW-GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3578999999999987 57788888899999999999998865 77889999999999999998767877778999999
Q ss_pred EEccCCcccccC-CccCcCCCCCCEEeCcCCcccccCC---ccccCCCCCCEEEcccccCc
Q 036034 82 LDLSGNEIRGSI-PSTFGHLKRLKSLDLSQNKLVGPIP---SSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 82 L~L~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~~n~i~ 138 (482)
|++++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++..|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999988532 2788899999999999999986544 47888899999888887764
No 121
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=8.6e-19 Score=183.22 Aligned_cols=86 Identities=28% Similarity=0.408 Sum_probs=38.8
Q ss_pred CccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCC
Q 036034 46 PSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLT 125 (482)
Q Consensus 46 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 125 (482)
+..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..|+.+++|++|+|++|.++ .+|..|+.++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 444444555555555555544 34444444555555555555544 44444445555555555555544 3444444444
Q ss_pred CCCEEEccc
Q 036034 126 QLTTLNMRS 134 (482)
Q Consensus 126 ~L~~L~l~~ 134 (482)
+|++|+|++
T Consensus 294 ~L~~L~L~~ 302 (727)
T 4b8c_D 294 QLKYFYFFD 302 (727)
T ss_dssp TCSEEECCS
T ss_pred CCCEEECCC
Confidence 444444433
No 122
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=1.1e-17 Score=139.34 Aligned_cols=129 Identities=24% Similarity=0.258 Sum_probs=112.7
Q ss_pred CCCCCCEEeccCCccc-cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 3 RLRNLVHLDLSDNYLW-GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..++++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999997 67888889999999999999999966 77899999999999999999768888888999999
Q ss_pred EEccCCccccc-CCccCcCCCCCCEEeCcCCcccccCC---ccccCCCCCCEEEcc
Q 036034 82 LDLSGNEIRGS-IPSTFGHLKRLKSLDLSQNKLVGPIP---SSLGHLTQLTTLNMR 133 (482)
Q Consensus 82 L~L~~n~~~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~ 133 (482)
|++++|.+++. .+..++.+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 99999999863 34789999999999999999987655 478889999998875
No 123
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=6e-17 Score=153.78 Aligned_cols=279 Identities=15% Similarity=0.095 Sum_probs=143.6
Q ss_pred CCCCEEeccCCccccCCCcccCC-CCCCCEEeCcCCccc--ccCCccccCCCCCCeeecccCcceeccCccccC------
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGR-LSKLENLHLSSNSLV--GNIPSTLGHLTQLTTLAIASNHINVSIPLEIGN------ 75 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------ 75 (482)
.+++.|.++++- ...-...+.. +++|++|+|++|++. ...+.. ++.++.+.+..|.+ .+.+|.+
T Consensus 25 ~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETTEE
T ss_pred CceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccccc
Confidence 456777777642 1111122333 677888888887776 222211 22234444444422 2344455
Q ss_pred --CCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc-----------ccc
Q 036034 76 --LNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA-----------SLV 142 (482)
Q Consensus 76 --l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-----------~~~ 142 (482)
+++|+.|+|.+ .++...+.+|..+++|+.|++.+|.+....+.+|..+.++..+....+.... .+.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 66666666666 5554555566666666666666666655555556655555555444321100 011
Q ss_pred CcC-EEEcccCe-ecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeee
Q 036034 143 NLT-SLSLHYNN-LTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVK 220 (482)
Q Consensus 143 ~L~-~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 220 (482)
.|+ .+.+.... +.......-....++..+.+.++-...........+++|+.+++++|.++...+..|.++++|+.++
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 222 12221110 0000000111233445555544321111100011245666666666666644455566666666666
Q ss_pred ccCCcccCCCCccCcCCCCCC-EEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEEC
Q 036034 221 LYDNKLDGPIPPELMNCSKLM-ELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDL 293 (482)
Q Consensus 221 l~~n~l~~~~~~~~~~~~~L~-~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l 293 (482)
+.+| +....+.+|..|++|+ .+++.+ .++...+..|..+++|+.+++++|.+......+|..+++|+.++.
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 6665 4444445667777777 777776 555555667777777777777777777666667777777777653
No 124
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.8e-17 Score=143.08 Aligned_cols=173 Identities=21% Similarity=0.232 Sum_probs=123.7
Q ss_pred CEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCc-CCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccC
Q 036034 145 TSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPS-SVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYD 223 (482)
Q Consensus 145 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 223 (482)
+.+++++|+++ .+|..+. .+++.|++++|.+.+..+. .+..+++|++|++++|.+++..|..+..+++|+.|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666777665 4565443 3788888888888765553 477888888888888888877788888888888888888
Q ss_pred CcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCccccccC
Q 036034 224 NKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSIP 303 (482)
Q Consensus 224 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~p 303 (482)
|++++..+..+..+++|+.|++++|.+++..|..+..+++|++|++++|++.+..+..+- ...++...+..+...+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~-~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH-HHHHHHcCCCCCCCCCCCC
Confidence 888877777788888888888888888888888888888888888888888765432110 0011122334455556667
Q ss_pred ccCCCCCeEeccCCcCcc
Q 036034 304 KSVRKVPHLDVLGNNLEG 321 (482)
Q Consensus 304 ~~~~~l~~l~~~~n~~~~ 321 (482)
..+.+....++..+.+.+
T Consensus 167 ~~l~~~~l~~l~~~~~~C 184 (192)
T 1w8a_A 167 SKVRDVQIKDLPHSEFKC 184 (192)
T ss_dssp TTTTTSBGGGSCTTTCCC
T ss_pred hHHcCCChhhCcHhhcCc
Confidence 666666655666665543
No 125
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=3.4e-18 Score=178.72 Aligned_cols=218 Identities=21% Similarity=0.234 Sum_probs=117.3
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCee-----ecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCC
Q 036034 29 SKLENLHLSSNSLVGNIPSTLGHLTQLTTL-----AIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRL 103 (482)
Q Consensus 29 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L-----~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 103 (482)
+.++.|+|.+|.+.. .+..+....+|..+ ++..|.+. ..+..+..+++|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 457777887777774 33333333333332 33334444 45778899999999999999998 688888899999
Q ss_pred CEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCC
Q 036034 104 KSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIP 183 (482)
Q Consensus 104 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 183 (482)
++|+|++|.++ .+|..|+++++|++|+|++|.+ + .+|..++.+++|++|+|++|.++ .+|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l-----------------~-~lp~~~~~l~~L~~L~L~~N~l~-~lp 309 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-----------------T-SLPAELGSCFQLKYFYFFDNMVT-TLP 309 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC-----------------S-SCCSSGGGGTTCSEEECCSSCCC-CCC
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC-----------------C-ccChhhcCCCCCCEEECCCCCCC-ccC
Confidence 99999999998 7888888888888887776654 4 56888889999999999999987 778
Q ss_pred cCCcCCCCCCEEeccCCccccccCccCcCCCC-CCeeeccCCcccCCCCccCcCCCCCCEEEcCCC--------cCcccC
Q 036034 184 SSVGHLTQLNTLNMYSNQINGSIPLEIGNLKR-VEAVKLYDNKLDGPIPPELMNCSKLMELELGNN--------LLRGSI 254 (482)
Q Consensus 184 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n--------~l~~~~ 254 (482)
..++.+++|+.|+|++|.+++.+|..+..+.. +..+++.+|.+++.+|.. |..|+++.| .+.+..
T Consensus 310 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~ 383 (727)
T 4b8c_D 310 WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQST 383 (727)
T ss_dssp SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------
T ss_pred hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccc
Confidence 88999999999999999999888877754422 234788899998877764 456666666 333333
Q ss_pred CccccCccCCCEEeccCCcCc
Q 036034 255 PSEIGKLQELYYLDLSHNFIN 275 (482)
Q Consensus 255 ~~~~~~~~~L~~L~l~~n~l~ 275 (482)
+..+..+..+....++.|-+.
T Consensus 384 ~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 384 EHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------CCC
T ss_pred cchhhcccccceeeeeccccc
Confidence 444455556666667777654
No 126
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.8e-16 Score=136.68 Aligned_cols=128 Identities=25% Similarity=0.331 Sum_probs=115.8
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.+++++|.++ .+|..+ .++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 68999999996 567655 369999999999998 77889999999999999999999877888999999999999999
Q ss_pred cccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcc
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINA 139 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 139 (482)
.++...+..|..+++|++|+|++|+++...+..|..+++|++|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888899999999999999999997666679999999999999998764
No 127
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=3.1e-17 Score=155.71 Aligned_cols=256 Identities=10% Similarity=0.007 Sum_probs=128.5
Q ss_pred CCCCCEEeccCCccc--cCCCcccCCCCCCCEEeCcCCcccccCCccccC--------CCCCCeeecccCcceeccCccc
Q 036034 4 LRNLVHLDLSDNYLW--GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGH--------LTQLTTLAIASNHINVSIPLEI 73 (482)
Q Consensus 4 l~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--------l~~L~~L~l~~n~l~~~~~~~~ 73 (482)
+++|+.|||++|.+. ...+. .++.++.+.+..|. ..+..|.+ +++|+.|+|.+ .++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 455666666666654 11111 12223333344332 22234445 66666666666 5555555566
Q ss_pred cCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcc----cccCCccccCCCCCC-EEEcccccCc--------cc
Q 036034 74 GNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKL----VGPIPSSLGHLTQLT-TLNMRSNLIN--------AS 140 (482)
Q Consensus 74 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l----~~~~~~~l~~l~~L~-~L~l~~n~i~--------~~ 140 (482)
.++++|+.|++++|.+....+.+|..+.++..+.+..+.. ......+|.++..|+ .+.+.....- -.
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 6666666666666666555555666655555555544221 111223344444444 3333221100 01
Q ss_pred ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCC-ee
Q 036034 141 LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVE-AV 219 (482)
Q Consensus 141 ~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L 219 (482)
..++..+.+.++-...........+++|+.+++++|.++...+..|..+++|+.+++.+| +....+..|.++++|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 334444544433211111011112456666666666665444455666666666666665 4444445566666666 66
Q ss_pred eccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEe
Q 036034 220 KLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLD 268 (482)
Q Consensus 220 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 268 (482)
++.+ .+....+.+|..|++|+.+++++|.++...+..|..+++|+.++
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 6655 44444445566666666666666666655555666666666654
No 128
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.3e-16 Score=134.48 Aligned_cols=135 Identities=25% Similarity=0.280 Sum_probs=116.6
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
.+.+++++++++ .+|..+ .++|++|++++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 578999999986 456544 47999999999999977777889999999999999999976667789999999999999
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCc
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNL 144 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L 144 (482)
|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+...++.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 143 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 143 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCccH
Confidence 9999777777899999999999999999766666788999999999999887654433
No 129
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=2.4e-14 Score=138.83 Aligned_cols=240 Identities=13% Similarity=0.063 Sum_probs=106.2
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
.++.+.+.++ ++......|.++ +|+.+.|.++ ++..-..+|.++ +|+.+.+.. .++...+.+|.++.+|+.+++.
T Consensus 114 ~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~ 188 (401)
T 4fdw_A 114 GYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLS 188 (401)
T ss_dssp SCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECT
T ss_pred CccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecC
Confidence 3444444432 223333445443 4555555544 443444445552 455555553 4443444555555555555555
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL 165 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l 165 (482)
+|.++.....+|. ..+|+.+.+..+ +......+|.++++|+.+.+..+ ++..-...|.+
T Consensus 189 ~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~------------------l~~I~~~aF~~- 247 (401)
T 4fdw_A 189 KTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN------------------VSTIGQEAFRE- 247 (401)
T ss_dssp TSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT------------------CCEECTTTTTT-
T ss_pred CCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC------------------ccCcccccccc-
Confidence 5555533333333 355555555533 44344445555555555554432 11111223333
Q ss_pred CCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccc-----cccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 166 NRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQIN-----GSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 166 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
.+|+.+.+. +.+......+|..+++|+.+.+.+|.+. ...+..|..+++|+.+.+.+ .+......+|..|++|
T Consensus 248 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSC
T ss_pred CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCc
Confidence 345555552 2233233344555555555555544332 12223344444444444442 2332223344444444
Q ss_pred CEEEcCCCcCcccCCccccCccCCCEEeccCCcCc
Q 036034 241 MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFIN 275 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 275 (482)
+.+.|..+ ++.....+|..+ +|+.+++.+|.+.
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 44444332 332333444444 4444444444443
No 130
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=5.5e-16 Score=131.90 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=79.9
Q ss_pred CCCCEEEccCCccc-cCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEE
Q 036034 166 NRIRILDLSENKLV-GPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELE 244 (482)
Q Consensus 166 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 244 (482)
++|+.|++++|.+. +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666655 44555555566666666666665543 4555566666666666666655555555566666666
Q ss_pred cCCCcCcccC-CccccCccCCCEEeccCCcCccccc---hhhcCCCCCCEEECCCCccc
Q 036034 245 LGNNLLRGSI-PSEIGKLQELYYLDLSHNFINGKIL---SELGAIPSIDTVDLSMNNLS 299 (482)
Q Consensus 245 l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~l~l~~n~l~ 299 (482)
+++|.+++.. +..+..+++|+.|++++|++.+..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666665421 2456666667777777776665444 35666677777777766655
No 131
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=4.9e-16 Score=129.34 Aligned_cols=127 Identities=18% Similarity=0.283 Sum_probs=88.0
Q ss_pred CCCCEEEccCCccc-cCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEE
Q 036034 166 NRIRILDLSENKLV-GPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELE 244 (482)
Q Consensus 166 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 244 (482)
++|+.|++++|.+. +.+|..+..+++|+.|++++|.+++. ..++.+++|+.|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55667777777766 55666666677777777777766644 5566677777777777777766666666677777777
Q ss_pred cCCCcCccc-CCccccCccCCCEEeccCCcCccccc---hhhcCCCCCCEEECC
Q 036034 245 LGNNLLRGS-IPSEIGKLQELYYLDLSHNFINGKIL---SELGAIPSIDTVDLS 294 (482)
Q Consensus 245 l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~l~l~ 294 (482)
+++|.+++. .+..+..+++|++|++++|++.+..+ ..+..+++|+.++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777653 23667777777888888877776554 456777778777765
No 132
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=6.5e-15 Score=128.03 Aligned_cols=127 Identities=22% Similarity=0.316 Sum_probs=67.9
Q ss_pred EEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCc
Q 036034 170 ILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNL 249 (482)
Q Consensus 170 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 249 (482)
.+++++|.++ .+|..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+..|..+++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4455555544 3343322 34555555555554 344455555555555555555554444455555555556666555
Q ss_pred CcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccc
Q 036034 250 LRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 250 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 300 (482)
+++..+..|..+++|+.|++++|.+....+..+..+++|+.+++++|++.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 555555555555566666666665554444445555666666666665543
No 133
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=1e-15 Score=131.17 Aligned_cols=130 Identities=20% Similarity=0.162 Sum_probs=97.5
Q ss_pred CCCCCCEEeccCCccccCCCcccCCCC-CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 3 RLRNLVHLDLSDNYLWGYIPPTLGRLS-KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
++++|+.|++++|.++. ++. +..+. +|++|++++|.+++. ..|.++++|++|++++|.+++..+..+..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 46778888888888864 444 44444 888888888888865 57888888888888888888554444578888888
Q ss_pred EEccCCcccccCCc--cCcCCCCCCEEeCcCCcccccCCcc----ccCCCCCCEEEcccccCc
Q 036034 82 LDLSGNEIRGSIPS--TFGHLKRLKSLDLSQNKLVGPIPSS----LGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 82 L~L~~n~~~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~----l~~l~~L~~L~l~~n~i~ 138 (482)
|++++|.++ .+|. .+..+++|+.|++++|.+. ..|.. +..+++|++|+++.|.+.
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888886 4554 7788888888888888887 34553 777788888877776653
No 134
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=8.9e-15 Score=125.49 Aligned_cols=131 Identities=18% Similarity=0.180 Sum_probs=69.1
Q ss_pred CEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCC
Q 036034 169 RILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNN 248 (482)
Q Consensus 169 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n 248 (482)
+.++++++.+. .+|..+ .++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34445554444 233222 134555555555555433344455555555555555555444444555566666666666
Q ss_pred cCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcccccc
Q 036034 249 LLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNLSGSI 302 (482)
Q Consensus 249 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 302 (482)
.+++..+..+..+++|++|++++|.+.+..+..+..+++|+.+++++|++.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 665444444555666666666666665444444455666666666666665543
No 135
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.2e-13 Score=133.82 Aligned_cols=241 Identities=9% Similarity=0.050 Sum_probs=185.5
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+|+.+++.++ ++......|.++ +|+.+.|.+ .++..-+.+|.++++|+.+++..|.++.....+|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 6999999887 666666778874 799999986 67767778899999999999999999866666666 6899999998
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCcccccCcCEEEcccCeecccCCccCcCC
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTGPIPSTLGHL 165 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~~~~~~~~~l 165 (482)
.+ +...-..+|.++++|+.+.+..+ +......+|.+ .+|+.+.+.. .++..-...|.++
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~------------------~i~~I~~~aF~~c 270 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN------------------GVTNIASRAFYYC 270 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET------------------TCCEECTTTTTTC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC------------------CccEEChhHhhCC
Confidence 54 76677789999999999999875 55455566766 6777776632 2333345678888
Q ss_pred CCCCEEEccCCccc-----cCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 166 NRIRILDLSENKLV-----GPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 166 ~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
.+|+.+++.+|.+. ...+..|..+++|+.+.+.+ .+.......|.++++|+.+.+..+ +...-..+|.++ +|
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L 347 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GI 347 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CC
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CC
Confidence 88999998887664 34456788899999999984 466555677888899999999554 554556678888 99
Q ss_pred CEEEcCCCcCcccCCccccCcc-CCCEEeccCCcC
Q 036034 241 MELELGNNLLRGSIPSEIGKLQ-ELYYLDLSHNFI 274 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~n~l 274 (482)
+.+++.+|.+....+..|..++ .+..|++..+.+
T Consensus 348 ~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 348 KEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 9999999987766666676664 677888777654
No 136
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=6.4e-14 Score=119.08 Aligned_cols=105 Identities=26% Similarity=0.289 Sum_probs=57.0
Q ss_pred CCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 7 LVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 7 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
.+.+++++|.++ .+|..+ .++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345666666554 344433 25556666666666655555555555555555555555544444455555555555555
Q ss_pred CcccccCCccCcCCCCCCEEeCcCCccc
Q 036034 87 NEIRGSIPSTFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 87 n~~~~~~~~~l~~l~~L~~L~L~~n~l~ 114 (482)
|++++..+..|..+++|++|+|++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555444444555555555555555544
No 137
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=2.2e-14 Score=122.84 Aligned_cols=135 Identities=22% Similarity=0.227 Sum_probs=89.8
Q ss_pred CcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCC
Q 036034 162 LGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLM 241 (482)
Q Consensus 162 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 241 (482)
+..+.+|+.|++++|.+.. ++......++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4456677777777777763 343222233777777777777654 5667777777777777777754444446777788
Q ss_pred EEEcCCCcCcccCCc--cccCccCCCEEeccCCcCccccch---hhcCCCCCCEEECCCCcccc
Q 036034 242 ELELGNNLLRGSIPS--EIGKLQELYYLDLSHNFINGKILS---ELGAIPSIDTVDLSMNNLSG 300 (482)
Q Consensus 242 ~L~l~~n~l~~~~~~--~~~~~~~L~~L~l~~n~l~~~~~~---~~~~~~~L~~l~l~~n~l~~ 300 (482)
.|++++|.+. .+|. .+..+++|+.|++++|++...... .+..+++|+.+|+++|....
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 8888887775 3444 567777788888888877643222 36677888888887776653
No 138
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=5.8e-14 Score=119.37 Aligned_cols=111 Identities=23% Similarity=0.292 Sum_probs=98.1
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCc
Q 036034 30 KLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLS 109 (482)
Q Consensus 30 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~ 109 (482)
..+++++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4589999999999 5776663 889999999999998888999999999999999999997777788999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEcccccCcccccC
Q 036034 110 QNKLVGPIPSSLGHLTQLTTLNMRSNLINASLVN 143 (482)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~ 143 (482)
+|++++..+..|..+++|++|++++|.+...+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9999977777799999999999999988765443
No 139
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=1e-13 Score=118.21 Aligned_cols=104 Identities=23% Similarity=0.300 Sum_probs=52.2
Q ss_pred CEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCC
Q 036034 8 VHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGN 87 (482)
Q Consensus 8 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 87 (482)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 44555555553 3444332 45555555555555554555555555555555555555433333445555555555555
Q ss_pred cccccCCccCcCCCCCCEEeCcCCccc
Q 036034 88 EIRGSIPSTFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 88 ~~~~~~~~~l~~l~~L~~L~L~~n~l~ 114 (482)
.+++..+..|..+++|++|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555333333455555555555555443
No 140
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=2e-16 Score=138.50 Aligned_cols=162 Identities=25% Similarity=0.280 Sum_probs=109.8
Q ss_pred CCCCCEEeccCCccccCCCc------ccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCC
Q 036034 4 LRNLVHLDLSDNYLWGYIPP------TLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLN 77 (482)
Q Consensus 4 l~~L~~L~l~~n~~~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 77 (482)
...++.++++++.+.+..|. .+..+++|++|+|++|.+++ +| .+.++++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 45667777777777766665 77788888888888888885 56 7788888888888888887 5676667778
Q ss_pred CCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCC-ccccCCCCCCEEEcccccCcccccCcCEEEcccCeecc
Q 036034 78 FLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIP-SSLGHLTQLTTLNMRSNLINASLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~L~~L~l~~n~~~~ 156 (482)
+|++|++++|.+++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+. .+....
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~-------~~~~~~ 164 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE-------NNATSE 164 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT-------TTTHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc-------ccchHH
Confidence 88888888888875 44 57777888888888888774322 3567777777777766665432110 000000
Q ss_pred cCCccCcCCCCCCEEEccCCccc
Q 036034 157 PIPSTLGHLNRIRILDLSENKLV 179 (482)
Q Consensus 157 ~~~~~~~~l~~L~~L~l~~n~l~ 179 (482)
.....+..+++|+.|| ++.++
T Consensus 165 ~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 165 YRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHHCSSCSEEC--CGGGT
T ss_pred HHHHHHHhCCCcEEEC--CcccC
Confidence 1112356778888876 55554
No 141
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=2.8e-12 Score=124.66 Aligned_cols=279 Identities=12% Similarity=0.081 Sum_probs=132.5
Q ss_pred CCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCE
Q 036034 2 GRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQV 81 (482)
Q Consensus 2 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 81 (482)
..+++|+.+.|.++ ++.....+|.++.+|+.++|.++ ++......|.++++|+.+.+..+ +......+|.++..++.
T Consensus 68 ~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~ 144 (394)
T 4fs7_A 68 QGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEI 144 (394)
T ss_dssp TTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEE
T ss_pred hCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccc
Confidence 45667777777653 55455566777777777777654 45455566777777777666533 22222233333322221
Q ss_pred EEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccc-----------------------cCc
Q 036034 82 LDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSN-----------------------LIN 138 (482)
Q Consensus 82 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n-----------------------~i~ 138 (482)
..... .......+|.++++|+.+.+.++. ......+|.++.+|+.+.+..+ ...
T Consensus 145 ~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~~~~~ 221 (394)
T 4fs7_A 145 TIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYY 221 (394)
T ss_dssp ECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCTTCCE
T ss_pred ccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCCCceE
Confidence 11111 111223345555555555554432 2133344555555555554433 111
Q ss_pred c-----cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCC
Q 036034 139 A-----SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNL 213 (482)
Q Consensus 139 ~-----~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 213 (482)
. ...+|+.+.+... ++..-...+..+..++.+.+..+... .....+..+..++.+....+.+. ...+..+
T Consensus 222 i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~ 296 (394)
T 4fs7_A 222 LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGC 296 (394)
T ss_dssp ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTC
T ss_pred eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccc
Confidence 0 1223444433221 11112233444555555555444322 23334445555555544443221 1234455
Q ss_pred CCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEEC
Q 036034 214 KRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDL 293 (482)
Q Consensus 214 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l 293 (482)
.+|+.+.+..+ +......+|..|.+|+.+++..+ ++.....+|..+.+|+.+++..+ +......++..+++|+.+++
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 55665555433 22222344556666666666533 44333455556666666666544 44333445566666666665
Q ss_pred C
Q 036034 294 S 294 (482)
Q Consensus 294 ~ 294 (482)
.
T Consensus 374 p 374 (394)
T 4fs7_A 374 P 374 (394)
T ss_dssp E
T ss_pred C
Confidence 4
No 142
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.9e-13 Score=115.35 Aligned_cols=108 Identities=22% Similarity=0.275 Sum_probs=95.5
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcC
Q 036034 31 LENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQ 110 (482)
Q Consensus 31 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~ 110 (482)
-+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 6777664 8999999999999988888999999999999999999976666789999999999999
Q ss_pred CcccccCCccccCCCCCCEEEcccccCcccc
Q 036034 111 NKLVGPIPSSLGHLTQLTTLNMRSNLINASL 141 (482)
Q Consensus 111 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 141 (482)
|++++..+..|..+++|++|++++|.+...+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999766666999999999999999887543
No 143
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.8e-16 Score=137.51 Aligned_cols=112 Identities=22% Similarity=0.220 Sum_probs=64.8
Q ss_pred cCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 161 TLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 161 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
.+..+++|+.|++++|.+.+ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 55666666666666666654 44 5566666666666666665 445555555666666666666654 22 35555666
Q ss_pred CEEEcCCCcCcccCC-ccccCccCCCEEeccCCcCccc
Q 036034 241 MELELGNNLLRGSIP-SEIGKLQELYYLDLSHNFINGK 277 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~ 277 (482)
+.|++++|.+++..+ ..+..+++|++|++++|++.+.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 666666666553211 2455556666666666655544
No 144
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=129.95 Aligned_cols=76 Identities=26% Similarity=0.623 Sum_probs=65.4
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|...+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|++++|||||+++|+|.++++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 56778889999999999999864 4778999999643 23345789999999999999999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.||||
T Consensus 118 ~~lV~ 122 (329)
T 4aoj_A 118 LLMVF 122 (329)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 145
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.44 E-value=1.4e-13 Score=127.33 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=69.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|+..+.||+|+||+||+|+. .+|+.||||++++....+....+.+.+|++++++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999994 579999999997554444445678999999999999999999999999999999996
No 146
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.44 E-value=9.1e-14 Score=129.43 Aligned_cols=77 Identities=27% Similarity=0.429 Sum_probs=63.5
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
+++...+.||+|+||+||+|++. +++.||||+++... +....++|.+|+.++++++|||||+++|+|.++++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 34566788999999999999863 46789999996433 22345789999999999999999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.+|||
T Consensus 104 ~~lV~ 108 (308)
T 4gt4_A 104 LSMIF 108 (308)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99986
No 147
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.44 E-value=1.2e-13 Score=128.10 Aligned_cols=76 Identities=28% Similarity=0.576 Sum_probs=63.4
Q ss_pred hcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|...+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.++++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888899999999999999863 46789999996432 2345789999999999999999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.||||
T Consensus 90 ~~lV~ 94 (299)
T 4asz_A 90 LIMVF 94 (299)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 148
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.42 E-value=2.2e-13 Score=124.30 Aligned_cols=80 Identities=23% Similarity=0.378 Sum_probs=63.5
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|+..+.||+|+||+||+|+. .+|+.||+|++++....+....+.|.+|++++++++|||||++++++.+++..|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999994 56999999999765544444557899999999999999999999999999999999
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 92 m 92 (275)
T 3hyh_A 92 I 92 (275)
T ss_dssp E
T ss_pred E
Confidence 6
No 149
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.40 E-value=3.8e-13 Score=126.70 Aligned_cols=78 Identities=19% Similarity=0.352 Sum_probs=62.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||+||+|+. .+|+.||||+++..... ....+.|.+|++++++++|||||++++++.+++..||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 5799999999999999999994 56999999999754432 344678999999999999999999999999999999996
No 150
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.35 E-value=1.1e-12 Score=123.39 Aligned_cols=76 Identities=26% Similarity=0.400 Sum_probs=66.0
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||+++++|.+++..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4688889999999999999995 46999999999654322 2356889999999999999999999999999999996
No 151
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=1.4e-14 Score=139.11 Aligned_cols=182 Identities=15% Similarity=0.147 Sum_probs=82.0
Q ss_pred CCCCEEeccCCccccCCCcccCC-----CCCCCEEeCcCCcccccCCccc-cCCCCCCeeecccCcceeccCccc-----
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGR-----LSKLENLHLSSNSLVGNIPSTL-GHLTQLTTLAIASNHINVSIPLEI----- 73 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~----- 73 (482)
++|+.|+|++|.++......+.. .++|++|+|++|.+++.....+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34555555555554322222111 1455555555555543222221 123445555555555543222222
Q ss_pred cCCCCCCEEEccCCccccc----CCccCcCCCCCCEEeCcCCcccccC----CccccCCCCCCEEEcccccCcccccCcC
Q 036034 74 GNLNFLQVLDLSGNEIRGS----IPSTFGHLKRLKSLDLSQNKLVGPI----PSSLGHLTQLTTLNMRSNLINASLVNLT 145 (482)
Q Consensus 74 ~~l~~L~~L~L~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~l~~n~i~~~~~~L~ 145 (482)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.+++.. +..+...+ +|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~-----------------~L~ 214 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR-----------------QLQ 214 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS-----------------CCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC-----------------CcC
Confidence 1234455555555554321 2333344455555555555544321 22333334 455
Q ss_pred EEEcccCeecc----cCCccCcCCCCCCEEEccCCccccCCCcCCcCC---C--CCCEEe--ccCCccc
Q 036034 146 SLSLHYNNLTG----PIPSTLGHLNRIRILDLSENKLVGPIPSSVGHL---T--QLNTLN--MYSNQIN 203 (482)
Q Consensus 146 ~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---~--~L~~L~--l~~n~l~ 203 (482)
.|+|++|.+++ .++..+...++|+.|++++|.+++.....+..+ . .|+.+. +..+.+.
T Consensus 215 ~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 215 ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 55555555543 233445556778888888888765433333222 2 166666 5566554
No 152
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=1.1e-10 Score=113.36 Aligned_cols=276 Identities=10% Similarity=0.064 Sum_probs=185.1
Q ss_pred CCCCCCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccc----------------------cCCccccCCCCCCee
Q 036034 1 MGRLRNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVG----------------------NIPSTLGHLTQLTTL 58 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~----------------------~~~~~~~~l~~L~~L 58 (482)
|..+++|+.+++.++ ++......|..+.+|+.+.+..+ +.. ....+|.++++|+.+
T Consensus 90 F~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i 167 (394)
T 4fs7_A 90 FENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYV 167 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEE
T ss_pred hhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCccccccchhhhcccCCCcEE
Confidence 356889999999875 54455667888888887766543 111 123456667777777
Q ss_pred ecccCcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc
Q 036034 59 AIASNHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 59 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 138 (482)
.+..+. ......+|.++.+|+.+++..+ +......++.++..|+.+.+..+... +........+|+.+.+......
T Consensus 168 ~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~~~ 243 (394)
T 4fs7_A 168 SLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSFTE 243 (394)
T ss_dssp ECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTCCE
T ss_pred ecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCcee
Confidence 776543 3344566777777777777655 33345566777777777766655432 2333444567777776543211
Q ss_pred ------ccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcC
Q 036034 139 ------ASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGN 212 (482)
Q Consensus 139 ------~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 212 (482)
..+..++.+.+..+... .....+..+..++.+....+.+. ...+..+.+|+.+.+..+ +.......+.+
T Consensus 244 i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~ 318 (394)
T 4fs7_A 244 LGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFES 318 (394)
T ss_dssp ECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTT
T ss_pred cccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcC
Confidence 23567888888766433 44567788888998888766543 246778899999998765 54445667888
Q ss_pred CCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEE
Q 036034 213 LKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTV 291 (482)
Q Consensus 213 l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l 291 (482)
+.+|+.+++..+ +...-..+|.+|.+|+.+.+..+ ++.....+|..|++|+.+++..+- . .+..++..+++|+.+
T Consensus 319 c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 319 CTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRL-E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEEE
T ss_pred CCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCC-E-EhhheecCCCCCcEE
Confidence 999999999654 55444568899999999999876 665667789999999999997652 2 223456666666553
No 153
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.32 E-value=2.7e-12 Score=123.82 Aligned_cols=77 Identities=26% Similarity=0.394 Sum_probs=66.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||+++++|.+++..|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 35688899999999999999995 46999999999754322 235688999999999999999999999999999999
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 227 m 227 (423)
T 4fie_A 227 M 227 (423)
T ss_dssp E
T ss_pred E
Confidence 7
No 154
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.31 E-value=3.8e-12 Score=118.14 Aligned_cols=72 Identities=24% Similarity=0.477 Sum_probs=58.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++|+..+.||+|+||+||+|+. .+|+.||||+++... .....+.|.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~ 76 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKN 76 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecC
Confidence 45799999999999999999995 469999999996433 2234567999999999999999999999987654
No 155
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.31 E-value=4.4e-12 Score=116.70 Aligned_cols=76 Identities=25% Similarity=0.457 Sum_probs=61.7
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCEEEE
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RKCMFL 480 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~l 480 (482)
|...+.||+|+||+||+|+. .+++.||+|++..... .....+.|.+|++++++++|||||+++++|.+ ++..||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 35567899999999999995 4689999999965432 23345789999999999999999999999876 345788
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 107 vm 108 (290)
T 3fpq_A 107 VT 108 (290)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 156
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=6.4e-12 Score=119.98 Aligned_cols=101 Identities=24% Similarity=0.272 Sum_probs=45.9
Q ss_pred eCcCC-cccccCCccccCCCCCCeeeccc-CcceeccCccccCCCCCCEEEccCCcccccCCccCcCCCCCCEEeCcCCc
Q 036034 35 HLSSN-SLVGNIPSTLGHLTQLTTLAIAS-NHINVSIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNK 112 (482)
Q Consensus 35 ~L~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 112 (482)
+++++ +++ .+|. |..+++|++|+|++ |.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44443 344 2333 44444444444443 44444333444444444444444444444444444444455555555554
Q ss_pred ccccCCccccCCCCCCEEEcccccCc
Q 036034 113 LVGPIPSSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 113 l~~~~~~~l~~l~~L~~L~l~~n~i~ 138 (482)
+++..+..+..++ |++|++.+|.+.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCcc
Confidence 4433223333333 555555555544
No 157
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.9e-14 Score=136.87 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=54.9
Q ss_pred ccCcCEEEcccCeecc----cCCccCcCCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCccccccCccCcC
Q 036034 141 LVNLTSLSLHYNNLTG----PIPSTLGHLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQINGSIPLEIGN 212 (482)
Q Consensus 141 ~~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 212 (482)
.++|++|+|++|.+++ .++..+...++|+.|++++|.+++. ++..+...++|++|+|++|.+++.....+..
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3455556666666553 2355667778999999999999753 3344556789999999999998655444433
Q ss_pred C---C--CCCeee--ccCCccc
Q 036034 213 L---K--RVEAVK--LYDNKLD 227 (482)
Q Consensus 213 l---~--~L~~L~--l~~n~l~ 227 (482)
+ . .++.+. +..+.++
T Consensus 262 ~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 262 LGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CC------CEEECCCC----CH
T ss_pred HhcCCCccchhhHhhhcCCccC
Confidence 2 2 155665 5555554
No 158
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.30 E-value=4.1e-12 Score=117.84 Aligned_cols=76 Identities=25% Similarity=0.511 Sum_probs=62.1
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+++...+.||+|+||+||+|++. ..||||+++.... .....+.|.+|++++++++|||||+++|+|.+ +..||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 356777889999999999999974 3699999965332 33456789999999999999999999999864 5677875
No 159
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=1.3e-09 Score=105.70 Aligned_cols=283 Identities=8% Similarity=0.109 Sum_probs=149.6
Q ss_pred CCCEEeccCCccccCCCcccCCCCCCCEEeCcCCc---ccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEE
Q 036034 6 NLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNS---LVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVL 82 (482)
Q Consensus 6 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 82 (482)
.|+.+.+.++ ++.....+|.++.+|+.+.+.+|. ++..-..+|.++.+|+.+.+..+ ++.....+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 3666666653 444455667777777777766542 45444556666777777666543 333445566667777777
Q ss_pred EccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc------ccccCcCEEEcccCeecc
Q 036034 83 DLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN------ASLVNLTSLSLHYNNLTG 156 (482)
Q Consensus 83 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~------~~~~~L~~L~l~~n~~~~ 156 (482)
.+..+ +......+|..+.+|+.+.+..+ +......+|. ..+|+.+.+..+-.. ..+.++.......+....
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCB
T ss_pred cccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccccccchhhhccccceeccccccccc
Confidence 76543 23244456666667777766554 2222233343 245555555433211 012233333322221110
Q ss_pred cCC-------------ccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccC
Q 036034 157 PIP-------------STLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYD 223 (482)
Q Consensus 157 ~~~-------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 223 (482)
..- ..+.....+..+.+.. .+......+|..+..|+.+.+..+... .....+.+++.|+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 000 0000111222333321 122223345666677777777654332 334556667777777774
Q ss_pred CcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCcc
Q 036034 224 NKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNNL 298 (482)
Q Consensus 224 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l 298 (482)
+.+.......|..|.+|+.++|..+ ++.....+|..|.+|+.+.+..+ +......+|..+.+|+.+++.++..
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 3333333446677777777777654 44344566777777777777544 4444455677777777777776644
No 160
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=1.4e-11 Score=117.69 Aligned_cols=105 Identities=24% Similarity=0.148 Sum_probs=93.5
Q ss_pred CEEeccCC-ccccCCCcccCCCCCCCEEeCcC-CcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEcc
Q 036034 8 VHLDLSDN-YLWGYIPPTLGRLSKLENLHLSS-NSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLS 85 (482)
Q Consensus 8 ~~L~l~~n-~~~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 85 (482)
+.++++++ .++ .+|. +..+++|++|+|++ |.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 886 5788 99999999999996 99998888999999999999999999999888899999999999999
Q ss_pred CCcccccCCccCcCCCCCCEEeCcCCcccc
Q 036034 86 GNEIRGSIPSTFGHLKRLKSLDLSQNKLVG 115 (482)
Q Consensus 86 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 115 (482)
+|++++..+..+..++ |+.|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999966666666665 9999999999863
No 161
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=1.1e-09 Score=106.18 Aligned_cols=284 Identities=9% Similarity=0.092 Sum_probs=198.2
Q ss_pred CCCCCCCCEEeccCCc---cccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCC
Q 036034 1 MGRLRNLVHLDLSDNY---LWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLN 77 (482)
Q Consensus 1 ~~~l~~L~~L~l~~n~---~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 77 (482)
|.++++|+.+.+.++. ++......|..+.+|+.+.+.++ ++......|.++.+|+.+.+..+ +......+|..+.
T Consensus 83 F~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~ 160 (394)
T 4gt6_A 83 FYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCY 160 (394)
T ss_dssp TTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred hhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceeccc
Confidence 4578899999998764 55555678999999999888765 55566678999999999999754 4445667889999
Q ss_pred CCCEEEccCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCccc-----------------
Q 036034 78 FLQVLDLSGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLINAS----------------- 140 (482)
Q Consensus 78 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~----------------- 140 (482)
.|+.+.+..+ +...-..+|. ..+|+.+.+..+-.. ....++..+.++.......+.....
T Consensus 161 ~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 161 SLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp TCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred ccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccc
Confidence 9999999765 4434445554 467999988765433 5567788888888877655433210
Q ss_pred ---ccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCC
Q 036034 141 ---LVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVE 217 (482)
Q Consensus 141 ---~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 217 (482)
...+..+.+.. .++..-...|..+..|+.+.+..+... .....+..++.|+.+.+.. .+.......|.++.+|+
T Consensus 238 ~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~ 314 (394)
T 4gt6_A 238 YPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLK 314 (394)
T ss_dssp CCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCC
T ss_pred cccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcC
Confidence 11233333322 233334567888999999999876543 4556788899999999974 45544556788899999
Q ss_pred eeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCCCc
Q 036034 218 AVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSMNN 297 (482)
Q Consensus 218 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~ 297 (482)
.+.+..+ ++.....+|..|.+|+.+.+..+ ++.....+|..|++|+.+++.++... ...+....+|+.+.+..+.
T Consensus 315 ~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 315 SIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC---------
T ss_pred EEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCC
Confidence 9999764 44344567899999999999765 66455678999999999999988643 2455666778888776554
No 162
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.26 E-value=5e-12 Score=117.85 Aligned_cols=74 Identities=22% Similarity=0.320 Sum_probs=58.0
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----EEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK----CMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~ 479 (482)
++|...+.||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+++ +.|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4677889999999999999998 589999999864321 1123445666667899999999999998754 578
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
|||
T Consensus 78 lV~ 80 (303)
T 3hmm_A 78 LVS 80 (303)
T ss_dssp EEE
T ss_pred EEe
Confidence 885
No 163
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.25 E-value=9.7e-12 Score=116.52 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=62.7
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 45788888999999999999995 4699999999965322 24699999999999999999999999999999
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 129 m 129 (336)
T 4g3f_A 129 M 129 (336)
T ss_dssp E
T ss_pred E
Confidence 6
No 164
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.23 E-value=3.8e-12 Score=117.76 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=60.6
Q ss_pred hcccccceeCccCcEEEEEEEc----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
++|+..+.||+|+||+||+|+. ..++.||+|+++...... .....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 5799999999999999999984 247899999997543322 22346889999999999999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
|||
T Consensus 103 ivm 105 (304)
T 3ubd_A 103 LIL 105 (304)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 165
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.19 E-value=2.2e-11 Score=117.49 Aligned_cols=78 Identities=26% Similarity=0.457 Sum_probs=64.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR------K 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~ 476 (482)
++|...+.||+|+||+||+|+. .+|+.||||+++.... .....+.+.+|+++|++++|||||++++++... +
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 4699999999999999999994 5799999999965332 233457789999999999999999999997643 5
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..||||
T Consensus 133 ~~~ivm 138 (398)
T 4b99_A 133 SVYVVL 138 (398)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 678886
No 166
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.17 E-value=1.9e-11 Score=115.94 Aligned_cols=85 Identities=22% Similarity=0.341 Sum_probs=67.5
Q ss_pred HHHHHHHhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC-CCccce
Q 036034 396 FQDIIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH-RNIVKL 468 (482)
Q Consensus 396 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l 468 (482)
..+++...++|+..+.||+|+||+||+|++. .++.||||+++.... ....++|.+|+++|.+++| ||||++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3455566788999999999999999999853 235799999975432 2345789999999999965 999999
Q ss_pred eEEEEeC-CEEEEEC
Q 036034 469 YGFCLHR-KCMFLIY 482 (482)
Q Consensus 469 ~g~~~~~-~~~~lv~ 482 (482)
+|+|.+. ++.||||
T Consensus 134 ~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 134 LGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEECCTTSCCEEEE
T ss_pred EEEEEecCCEEEEEE
Confidence 9999774 5678875
No 167
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.08 E-value=2.1e-10 Score=116.29 Aligned_cols=77 Identities=26% Similarity=0.403 Sum_probs=67.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|+..+.||+|+||.||+|+. .+|+.||+|.+.... ....+.+.+|+++|++++|||||++++++.+++..|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 36799999999999999999995 469999999986533 22346789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 233 ~ 233 (573)
T 3uto_A 233 Y 233 (573)
T ss_dssp E
T ss_pred E
Confidence 6
No 168
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.08 E-value=4.6e-10 Score=105.75 Aligned_cols=89 Identities=25% Similarity=0.341 Sum_probs=73.6
Q ss_pred CCcccHHHHHHHhhc----------ccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhc
Q 036034 391 DGRITFQDIIEATED----------FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQ 459 (482)
Q Consensus 391 ~~~~~~~~~~~~~~~----------~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~ 459 (482)
.+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRD 98 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHh
Confidence 356888888888764 666778999999999999965 799999999864332 234678999999999
Q ss_pred CCCCCccceeEEEEeCCEEEEEC
Q 036034 460 IRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 460 l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|||||+++++|...+..++||
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~ 121 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLM 121 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCCcceEEEEEEECCEEEEEE
Confidence 99999999999999999999986
No 169
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.07 E-value=3.5e-10 Score=104.66 Aligned_cols=79 Identities=13% Similarity=0.065 Sum_probs=69.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|...+.||+|+||.||+|+.. +++.||+|++......+....+.|.+|++++.+++|||||++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999964 58999999997654444445678999999999999999999999999999999986
No 170
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.06 E-value=7.8e-11 Score=111.36 Aligned_cols=90 Identities=32% Similarity=0.664 Sum_probs=76.0
Q ss_pred CCcccHHHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeE
Q 036034 391 DGRITFQDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYG 470 (482)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g 470 (482)
...+++.++..+.++|...+.||+|+||.||+|+..+|+.||||++....... ....|.+|++++++++|||||++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEE
Confidence 34678899999999999999999999999999998789999999997543222 1236899999999999999999999
Q ss_pred EEEeCCEEEEEC
Q 036034 471 FCLHRKCMFLIY 482 (482)
Q Consensus 471 ~~~~~~~~~lv~ 482 (482)
+|.+.+..++||
T Consensus 95 ~~~~~~~~~lv~ 106 (326)
T 3uim_A 95 FCMTPTERLLVY 106 (326)
T ss_dssp EECCSSCCEEEE
T ss_pred EEecCCceEEEE
Confidence 999988888875
No 171
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.05 E-value=2.8e-10 Score=115.20 Aligned_cols=80 Identities=26% Similarity=0.276 Sum_probs=64.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHH---HHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESF---RNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||+||+|+. .+|+.||+|++++...........+ ..++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999995 4699999999965433222222333 3446788899999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
||||
T Consensus 268 ylVm 271 (689)
T 3v5w_A 268 SFIL 271 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 172
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.04 E-value=4.7e-10 Score=106.90 Aligned_cols=80 Identities=29% Similarity=0.461 Sum_probs=68.5
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|...+.||+|+||.||+|+. .+|+.||||++...........+.|.+|++++.+++|||||+++++|.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35588889999999999999994 57899999999754444444457899999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 133 ~ 133 (348)
T 1u5q_A 133 M 133 (348)
T ss_dssp E
T ss_pred E
Confidence 6
No 173
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.04 E-value=2.2e-10 Score=109.29 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=65.2
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
....+.|+..+.||+|+||+||+|+. ..++.||+|++.... ....+.+|++++..+ +|||||++++++.+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 34456799999999999999999973 246789999985432 235688999999998 69999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..||||
T Consensus 92 ~~~~~lvm 99 (361)
T 4f9c_A 92 NDHVVIAM 99 (361)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 99999986
No 174
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.03 E-value=8.5e-11 Score=110.83 Aligned_cols=87 Identities=40% Similarity=0.666 Sum_probs=73.3
Q ss_pred cccHHHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 036034 393 RITFQDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFC 472 (482)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 472 (482)
++++.++..++++|...+.||+|+||.||+|+..+++.||||++.... ....+.|.+|++++++++|||||+++++|
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 344455666888999999999999999999998889999999986532 23457899999999999999999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
.+.+..++||
T Consensus 105 ~~~~~~~lv~ 114 (321)
T 2qkw_B 105 DERNEMILIY 114 (321)
T ss_dssp CCTTCCEEEE
T ss_pred cCCCeEEEEE
Confidence 9998888885
No 175
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.03 E-value=6.2e-10 Score=104.11 Aligned_cols=90 Identities=26% Similarity=0.527 Sum_probs=76.1
Q ss_pred CcccHHHHHHHhhccccc------ceeCccCcEEEEEEEcCCCCEEEEEEeccccc-cchhhHHHHHHHHHHHhcCCCCC
Q 036034 392 GRITFQDIIEATEDFHIK------YCIGTGGYGSVYRARLPSGKVVALKKLHCSET-EELTSLESFRNKARLLSQIRHRN 464 (482)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~------~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~~~e~~~l~~l~H~n 464 (482)
..+++.++..++++|... +.||+|+||.||+|+. +++.||||++..... ......+.|.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 357899999999999877 8899999999999997 688999999864322 22234578999999999999999
Q ss_pred ccceeEEEEeCCEEEEEC
Q 036034 465 IVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 465 iv~l~g~~~~~~~~~lv~ 482 (482)
|+++++++.+.+..++||
T Consensus 92 i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp BCCEEEEECSSSSCEEEE
T ss_pred eEEEEEEEecCCceEEEE
Confidence 999999999988888875
No 176
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.02 E-value=7.8e-10 Score=102.79 Aligned_cols=79 Identities=28% Similarity=0.426 Sum_probs=68.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+. .+++.||+|++...........+.|.+|++++.+++|||||++++++.+.+..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5688899999999999999994 468999999986544444455678999999999999999999999999999999885
No 177
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.02 E-value=1.7e-10 Score=112.06 Aligned_cols=86 Identities=21% Similarity=0.334 Sum_probs=70.6
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.++....++|...+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.++..++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344456788999999999999999999964 5889999999653322222335688999999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 142 ~~~~lV~ 148 (410)
T 3v8s_A 142 RYLYMVM 148 (410)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9999986
No 178
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=8.7e-08 Score=92.37 Aligned_cols=131 Identities=9% Similarity=0.133 Sum_probs=75.0
Q ss_pred cCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCccccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCC
Q 036034 161 TLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQINGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKL 240 (482)
Q Consensus 161 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 240 (482)
.+.....|+.+.+..+ +.......+..+..|+.+.+..+ ++......+..+.+|+.+.+..+ +.......|..|++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444555666666543 22233345566667777766554 33333445556666776666433 332233456667777
Q ss_pred CEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhhcCCCCCCEEECCC
Q 036034 241 MELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSELGAIPSIDTVDLSM 295 (482)
Q Consensus 241 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~ 295 (482)
+.+.+.++.++......|..+.+|+.+.+..+ +......+|..+.+|+.+.+..
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 77777766666555566677777777777544 4433345666666776666643
No 179
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.01 E-value=4e-10 Score=106.63 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=67.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++..++|||||++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46788999999999999999995 57899999998643322223346789999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 88 ~ 88 (336)
T 3h4j_B 88 I 88 (336)
T ss_dssp E
T ss_pred E
Confidence 5
No 180
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.00 E-value=5.1e-10 Score=104.95 Aligned_cols=80 Identities=28% Similarity=0.513 Sum_probs=66.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..++|...+.||+|+||.||+|+..+|+.||+|++..... .....+.+.+|++++.+++|||||++++++.+++..++|
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 3467999999999999999999987899999999965432 223346789999999999999999999999999999888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 98 ~ 98 (311)
T 3niz_A 98 F 98 (311)
T ss_dssp E
T ss_pred E
Confidence 5
No 181
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.00 E-value=6.8e-10 Score=102.87 Aligned_cols=78 Identities=32% Similarity=0.524 Sum_probs=66.8
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+..+|+.||+|++...... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 468889999999999999999877999999999654322 223367889999999999999999999999999998885
No 182
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.00 E-value=7.1e-10 Score=105.03 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=68.5
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||+||+|+.. +|+.||+|+++..........+.+.+|++++.+++|||||++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999954 6999999999654332334457789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 84 ~ 84 (337)
T 1o6l_A 84 M 84 (337)
T ss_dssp E
T ss_pred E
Confidence 6
No 183
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.00 E-value=9.5e-10 Score=103.80 Aligned_cols=80 Identities=29% Similarity=0.475 Sum_probs=68.8
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+.+|++++++++|||||++++++.+.+..|+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 456799999999999999999995 5799999999965432 23345778999999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 92 v~ 93 (328)
T 3fe3_A 92 IM 93 (328)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 184
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.00 E-value=6.2e-10 Score=101.99 Aligned_cols=75 Identities=27% Similarity=0.499 Sum_probs=66.0
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+..+++.||+|++..... ..++|.+|++++.+++||||+++++++.+.+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999987888999999975432 2367999999999999999999999999988888885
No 185
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=98.99 E-value=1.9e-10 Score=112.65 Aligned_cols=88 Identities=25% Similarity=0.323 Sum_probs=72.2
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCL 473 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 473 (482)
.+.++....++|...+.||+|+||+||+|+.. +++.||+|+++..........+.+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555566789999999999999999999965 47899999996533222223345889999999999999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+++..|+||
T Consensus 145 ~~~~~~lV~ 153 (437)
T 4aw2_A 145 DDNNLYLVM 153 (437)
T ss_dssp CSSEEEEEE
T ss_pred eCCEEEEEE
Confidence 999999986
No 186
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=98.99 E-value=1.2e-09 Score=101.29 Aligned_cols=78 Identities=27% Similarity=0.462 Sum_probs=67.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||+||+|+. .+++.||+|++..... .....+.+.+|++++.+++|||||++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 4688899999999999999995 4689999999975432 2334577899999999999999999999999999999986
No 187
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=98.98 E-value=6.6e-10 Score=107.01 Aligned_cols=80 Identities=20% Similarity=0.349 Sum_probs=68.7
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++.+++|||||+++++|.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 36789999999999999999995 45889999999654433444567899999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 94 ~ 94 (384)
T 4fr4_A 94 V 94 (384)
T ss_dssp E
T ss_pred E
Confidence 5
No 188
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=98.98 E-value=7.7e-10 Score=103.93 Aligned_cols=80 Identities=28% Similarity=0.457 Sum_probs=68.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||+||+++. .+|+.||+|+++..........+.+.+|+.+++.++|||||++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 36789999999999999999995 46999999999754333334557788999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 85 ~ 85 (318)
T 1fot_A 85 M 85 (318)
T ss_dssp E
T ss_pred E
Confidence 6
No 189
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=98.98 E-value=9.4e-10 Score=101.15 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=57.0
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788899999999999999994 468999999997554344344578999999999999999999999999999888885
No 190
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=98.97 E-value=3e-10 Score=110.49 Aligned_cols=88 Identities=20% Similarity=0.343 Sum_probs=72.4
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCL 473 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 473 (482)
.+.+.....++|...+.||+|+||+||+++. .+|+.||+|++++.........+.+.+|+.++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3445555678999999999999999999996 469999999996533222233456889999999999999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..|+||
T Consensus 132 ~~~~~~lVm 140 (412)
T 2vd5_A 132 DENYLYLVM 140 (412)
T ss_dssp CSSEEEEEE
T ss_pred eCCEEEEEE
Confidence 999999986
No 191
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=98.97 E-value=8.8e-10 Score=105.19 Aligned_cols=80 Identities=19% Similarity=0.342 Sum_probs=66.9
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
.+.|...+.||+|+||.||+|+. .+|+.||||+++..... .....+.+.+|++++.+++|||||++++++.+.+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35789999999999999999985 46899999998643211 1123578999999999999999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 103 lv~ 105 (351)
T 3c0i_A 103 MVF 105 (351)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 192
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=98.97 E-value=1.4e-09 Score=102.84 Aligned_cols=73 Identities=23% Similarity=0.445 Sum_probs=60.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
..++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 77 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETP 77 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence 3467999999999999999999964 79999999996433 2234578999999999999999999999987654
No 193
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=98.97 E-value=1e-09 Score=101.17 Aligned_cols=81 Identities=36% Similarity=0.573 Sum_probs=68.0
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
+.++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||++++++|.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567999999999999999999854 578999999865433333345679999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 v~ 88 (279)
T 3fdn_A 87 IL 88 (279)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 194
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=98.97 E-value=1.8e-09 Score=101.07 Aligned_cols=81 Identities=27% Similarity=0.434 Sum_probs=67.9
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+|+.||+|++......+....+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 346799999999999999999994 5799999999975444444556789999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 110 v~ 111 (310)
T 2wqm_A 110 VL 111 (310)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 195
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=1.8e-10 Score=109.56 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=101.0
Q ss_pred CCCCEEeccCCcccc-CC-------CcccCCCCCCCEEeCcCCccc---------ccCCccccCCCCCCeeecccCccee
Q 036034 5 RNLVHLDLSDNYLWG-YI-------PPTLGRLSKLENLHLSSNSLV---------GNIPSTLGHLTQLTTLAIASNHINV 67 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~-~~-------~~~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~l~~ 67 (482)
..++.|.+......+ .. ..+...+++|+.|.+.+.... +.+...+..+|+|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 346667666554331 11 122345677887777554221 123344456677777777766311
Q ss_pred ccCccccCCCCCCEEEccCCcccccCCccCc--CCCCCCEEeCcC--Cccccc-----CCccc--cCCCCCCEEEccccc
Q 036034 68 SIPLEIGNLNFLQVLDLSGNEIRGSIPSTFG--HLKRLKSLDLSQ--NKLVGP-----IPSSL--GHLTQLTTLNMRSNL 136 (482)
Q Consensus 68 ~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~--~l~~L~~L~L~~--n~l~~~-----~~~~l--~~l~~L~~L~l~~n~ 136 (482)
.++. +. +++|++|+|..|.+.......++ .+++|++|+|+. |...+. +...+ ..+++|++|++
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L---- 259 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGI---- 259 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEE----
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeC----
Confidence 2232 32 66777777776666543333333 567777776642 111110 00111 12444555544
Q ss_pred CcccccCcCEEEcccCeecccCCccC---cCCCCCCEEEccCCccccC----CCcCCcCCCCCCEEeccCCccccccCcc
Q 036034 137 INASLVNLTSLSLHYNNLTGPIPSTL---GHLNRIRILDLSENKLVGP----IPSSVGHLTQLNTLNMYSNQINGSIPLE 209 (482)
Q Consensus 137 i~~~~~~L~~L~l~~n~~~~~~~~~~---~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 209 (482)
.+|.+++..+..+ ..+++|+.|+|+.|.+.+. ++..+..+++|+.|+++.|.+++.....
T Consensus 260 -------------~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 260 -------------VDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp -------------ESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred -------------CCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 4444432211111 2467788888888777653 2233345677888888888776543333
Q ss_pred CcCCCCCCeeeccCCc
Q 036034 210 IGNLKRVEAVKLYDNK 225 (482)
Q Consensus 210 ~~~l~~L~~L~l~~n~ 225 (482)
+...- ...++++.++
T Consensus 327 l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 327 LQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHC-CSEEECCSBC
T ss_pred HHHHc-CCEEEecCCc
Confidence 32200 2446666665
No 196
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=98.97 E-value=1.9e-09 Score=100.92 Aligned_cols=77 Identities=19% Similarity=0.381 Sum_probs=66.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++... +....+.|.+|++++.+++|||||+++++|.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 35788899999999999999995 46899999988542 234457899999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 86 ~ 86 (310)
T 3s95_A 86 T 86 (310)
T ss_dssp E
T ss_pred E
Confidence 5
No 197
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=98.96 E-value=1.7e-09 Score=103.41 Aligned_cols=80 Identities=23% Similarity=0.308 Sum_probs=67.5
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE---LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+.|...+.||+|+||.||+|+. .+|+.||+|.++...... ....+.+.+|++++.+++|||||++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 45788999999999999999995 469999999997543221 12357899999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 91 ~lv~ 94 (361)
T 2yab_A 91 VLIL 94 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 198
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=98.96 E-value=1.8e-09 Score=100.25 Aligned_cols=80 Identities=16% Similarity=0.269 Sum_probs=68.6
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+++.. +++.+|+|.+...........+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999964 5889999998654434444567899999999999999999999999999999888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 94 ~ 94 (294)
T 2rku_A 94 L 94 (294)
T ss_dssp E
T ss_pred E
Confidence 5
No 199
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=98.96 E-value=1.8e-09 Score=103.49 Aligned_cols=80 Identities=20% Similarity=0.404 Sum_probs=68.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+|+.||+|++..... .....+.+.+|++++.+++|||||++++++.+.+..|+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456899999999999999999995 4689999999965432 23345679999999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 106 v~ 107 (362)
T 2bdw_A 106 VF 107 (362)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 200
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=98.96 E-value=1.2e-09 Score=103.73 Aligned_cols=79 Identities=24% Similarity=0.429 Sum_probs=66.7
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||+||+|+. .+|+.||||++....... ..+.+.+|++++.+++|||||++++++.+.+..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 456799999999999999999994 579999999996543222 23568899999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 86 v~ 87 (347)
T 3zgw_A 86 VL 87 (347)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 201
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=98.96 E-value=1.6e-09 Score=103.01 Aligned_cols=80 Identities=20% Similarity=0.363 Sum_probs=68.7
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++.++ +|||||++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357889999999999999999964 5889999999765444444567789999999988 89999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 88 v~ 89 (345)
T 3a8x_A 88 VI 89 (345)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 202
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=98.95 E-value=1.2e-09 Score=100.77 Aligned_cols=77 Identities=25% Similarity=0.494 Sum_probs=64.2
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..++|...+.||+|+||.||+|...++..||+|++...... .++|.+|++++.+++||||++++++|.+.+..++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 45678899999999999999999888889999999754322 36799999999999999999999999998888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 98 ~ 98 (283)
T 3gen_A 98 T 98 (283)
T ss_dssp E
T ss_pred E
Confidence 5
No 203
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=98.95 E-value=1.1e-09 Score=100.28 Aligned_cols=76 Identities=22% Similarity=0.437 Sum_probs=66.3
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++.+++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 467888999999999999999988888999999965332 2367999999999999999999999999988888875
No 204
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=100.39 Aligned_cols=81 Identities=25% Similarity=0.511 Sum_probs=68.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+|+.||+|.+...........+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346799999999999999999995 5799999999964433333345789999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 89 v~ 90 (278)
T 3cok_A 89 VL 90 (278)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 205
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=98.95 E-value=1.2e-09 Score=104.06 Aligned_cols=80 Identities=24% Similarity=0.348 Sum_probs=68.9
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+++.. +|+.||+|++...........+.+.+|++++.+++|||||++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367889999999999999999954 6999999999654433344567899999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 120 ~ 120 (350)
T 1rdq_E 120 M 120 (350)
T ss_dssp E
T ss_pred E
Confidence 6
No 206
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=98.95 E-value=2.3e-09 Score=99.80 Aligned_cols=77 Identities=21% Similarity=0.335 Sum_probs=66.4
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+.++.+++|||||++++++.+++..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 46788899999999999999994 5799999999864332 2346789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 96 ~ 96 (297)
T 3fxz_A 96 M 96 (297)
T ss_dssp E
T ss_pred E
Confidence 6
No 207
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.94 E-value=1.9e-09 Score=107.76 Aligned_cols=80 Identities=26% Similarity=0.476 Sum_probs=69.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|++++.+++|||||+++++|.+.+..|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357889999999999999999954 7899999999755444344567899999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 105 ~ 105 (484)
T 3nyv_A 105 G 105 (484)
T ss_dssp E
T ss_pred E
Confidence 5
No 208
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=98.94 E-value=1.2e-09 Score=103.90 Aligned_cols=84 Identities=25% Similarity=0.484 Sum_probs=70.2
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
+....++|...+.||+|+||.||+|+. .+++.||+|++...... .....+.|.+|++++.+++|||||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 556678899999999999999999995 46889999998643211 233457899999999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 101 ~~~~lv~ 107 (345)
T 3hko_A 101 QYICLVM 107 (345)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9999885
No 209
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=98.94 E-value=2.2e-09 Score=101.70 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=69.2
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+++.. +++.+|+|.+...........+.+.+|+.++.+++||||+++++++.+.+..|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3467889999999999999999954 588999999875444444456789999999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 119 v~ 120 (335)
T 2owb_A 119 VL 120 (335)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 210
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=98.93 E-value=1.4e-09 Score=102.20 Aligned_cols=78 Identities=24% Similarity=0.442 Sum_probs=53.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.... ....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 45788899999999999999995 4689999999965432 22336788999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 82 ~ 82 (317)
T 2pmi_A 82 F 82 (317)
T ss_dssp E
T ss_pred E
Confidence 5
No 211
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=98.93 E-value=1.5e-09 Score=101.61 Aligned_cols=81 Identities=27% Similarity=0.381 Sum_probs=68.5
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
....++|...+.||+|+||.||+|+. .|+.||||++..... .....+.|.+|++++.+++|||||++++++.+.+..+
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 34457899999999999999999987 588999999865432 2344578999999999999999999999999998888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 111 lv~ 113 (309)
T 3p86_A 111 IVT 113 (309)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 212
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=98.93 E-value=7.1e-10 Score=106.94 Aligned_cols=79 Identities=30% Similarity=0.545 Sum_probs=66.9
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+.. +++.||||.++... .....++|.+|++++++++|||||+++|+|.+.+..|+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 3467888999999999999999975 68999999986432 22334578999999999999999999999999888888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 190 v~ 191 (377)
T 3cbl_A 190 VM 191 (377)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 213
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=98.93 E-value=2.4e-09 Score=101.10 Aligned_cols=80 Identities=21% Similarity=0.319 Sum_probs=67.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE---LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+.|...+.||+|+||.||+|+. .+|+.||+|.+....... ....+.+.+|++++.+++|||||++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35688899999999999999995 468999999996543221 12357899999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 90 ~lv~ 93 (326)
T 2y0a_A 90 ILIL 93 (326)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 214
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=98.92 E-value=1.7e-09 Score=101.85 Aligned_cols=78 Identities=24% Similarity=0.413 Sum_probs=64.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++..++|||||++++++.+++..|+|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999954 7899999998643322 2235688999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 84 ~ 84 (323)
T 3tki_A 84 L 84 (323)
T ss_dssp E
T ss_pred E
Confidence 5
No 215
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=98.92 E-value=2.7e-09 Score=99.92 Aligned_cols=81 Identities=19% Similarity=0.329 Sum_probs=68.8
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+.. +++.||+|++......+....+.|.+|++++.+++||||+++++++.+.+..|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 4578999999999999999999954 688999999975544444445789999999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 112 v~ 113 (309)
T 2h34_A 112 DM 113 (309)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 216
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=98.92 E-value=2.3e-09 Score=100.93 Aligned_cols=76 Identities=25% Similarity=0.312 Sum_probs=65.6
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +++.+|+|.+.... ...+.+.+|++++..++|||||++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 467889999999999999999954 58899999986432 2346789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 80 ~ 80 (321)
T 1tki_A 80 F 80 (321)
T ss_dssp E
T ss_pred E
Confidence 6
No 217
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=98.92 E-value=9.9e-10 Score=105.72 Aligned_cols=78 Identities=26% Similarity=0.440 Sum_probs=65.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||.||+|+.. .+..||||+++... .....++|.+|++++++++|||||+++|+|.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357888999999999999999854 47789999996532 233457899999999999999999999999998888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 122 ~lv~ 125 (373)
T 2qol_A 122 MIVT 125 (373)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8885
No 218
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=4.4e-10 Score=106.89 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=110.4
Q ss_pred CCCCCCEEeccCCccc---------cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccc
Q 036034 3 RLRNLVHLDLSDNYLW---------GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEI 73 (482)
Q Consensus 3 ~l~~L~~L~l~~n~~~---------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 73 (482)
++++|+.|.+.+.... +.+...+..+++|+.|+|++|.-. .++. +. +++|++|++..+.++......+
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l 213 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDI 213 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHH
Confidence 4689999999765331 124455677899999999988422 2333 43 8999999999998875443444
Q ss_pred c--CCCCCCEEEccC--Cccccc-----CCccC--cCCCCCCEEeCcCCcccccCCcccc---CCCCCCEEEcccccCcc
Q 036034 74 G--NLNFLQVLDLSG--NEIRGS-----IPSTF--GHLKRLKSLDLSQNKLVGPIPSSLG---HLTQLTTLNMRSNLINA 139 (482)
Q Consensus 74 ~--~l~~L~~L~L~~--n~~~~~-----~~~~l--~~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~l~~n~i~~ 139 (482)
. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+|.+.+..+..+. .+++|++|+++.|.+..
T Consensus 214 ~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 214 LGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 3 789999999864 222111 12223 3578999999999998754433333 35566666665554432
Q ss_pred cccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcC-CCCCCEEeccCCc
Q 036034 140 SLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGH-LTQLNTLNMYSNQ 201 (482)
Q Consensus 140 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~ 201 (482)
.- . ..++..+..+++|+.|+++.|.++......+.. + ...++++.++
T Consensus 294 ~G------------~-~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 294 EG------------A-RLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HH------------H-HHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HH------------H-HHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 10 0 012333345677777777777765433222222 1 2456666665
No 219
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=102.40 Aligned_cols=78 Identities=27% Similarity=0.422 Sum_probs=65.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||.||+|+.. .+..||||+++... .....+.|.+|++++.+++|||||+++++|.+.+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 356888899999999999999963 34569999996432 233457899999999999999999999999998888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 126 ~lv~ 129 (325)
T 3kul_A 126 MIVT 129 (325)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8885
No 220
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=98.91 E-value=2.3e-09 Score=98.58 Aligned_cols=80 Identities=23% Similarity=0.395 Sum_probs=68.1
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999964 6899999998654333334457899999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 90 ~ 90 (276)
T 2h6d_A 90 M 90 (276)
T ss_dssp E
T ss_pred E
Confidence 5
No 221
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=98.91 E-value=1.5e-09 Score=107.57 Aligned_cols=80 Identities=24% Similarity=0.416 Sum_probs=68.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+++++.++|||||++++++.+.+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999954 7999999999654333333456799999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 95 ~ 95 (476)
T 2y94_A 95 M 95 (476)
T ss_dssp E
T ss_pred E
Confidence 5
No 222
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=98.91 E-value=2.2e-09 Score=102.81 Aligned_cols=76 Identities=21% Similarity=0.333 Sum_probs=66.0
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+++.. +++.||+|++....... +.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 467999999999999999999954 78999999996543222 5688999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 95 ~ 95 (361)
T 3uc3_A 95 M 95 (361)
T ss_dssp E
T ss_pred E
Confidence 5
No 223
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=98.91 E-value=3.1e-09 Score=98.19 Aligned_cols=77 Identities=21% Similarity=0.409 Sum_probs=66.5
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.|...+.||+|+||.||+++. .+++.+|+|++..... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 5788899999999999999995 4689999999865432 234578999999999999999999999999999999885
No 224
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=98.90 E-value=1.9e-09 Score=102.75 Aligned_cols=81 Identities=22% Similarity=0.387 Sum_probs=67.8
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||+||+|+. .+|+.||+|+++..........+.+.+|++++..+ +|||||++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 346899999999999999999995 46899999999754333334557788999999988 6999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 101 lv~ 103 (353)
T 3txo_A 101 FVM 103 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 225
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=98.90 E-value=2.2e-09 Score=98.17 Aligned_cols=76 Identities=26% Similarity=0.462 Sum_probs=66.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|+..+++.||+|.+..... ..+++.+|++++.+++||||+++++++.+++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 357888999999999999999987888999999975432 2367999999999999999999999999988888875
No 226
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=98.90 E-value=2.2e-09 Score=101.36 Aligned_cols=80 Identities=26% Similarity=0.439 Sum_probs=60.9
Q ss_pred hhcccccceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
.++|...+.||+|+||.||+++. .+|+.||+|+++..... .......+.+|++++.+++|||||++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999985 46899999999754321 22334568899999999999999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 96 ~~lv~ 100 (327)
T 3a62_A 96 LYLIL 100 (327)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 227
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=98.90 E-value=2.1e-09 Score=106.31 Aligned_cols=79 Identities=23% Similarity=0.415 Sum_probs=66.4
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++...++|...+.||+|+||.||+|++.+++.||||+++... ...+.|.+|++++++++|||||++++++. .+..
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 344557888999999999999999998888899999997533 23478999999999999999999999986 5567
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 258 ~lv~ 261 (454)
T 1qcf_A 258 YIIT 261 (454)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 228
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=98.90 E-value=2.1e-09 Score=108.30 Aligned_cols=80 Identities=23% Similarity=0.364 Sum_probs=68.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|++.............+.+|++++.+++|||||++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788899999999999999995 46999999999654333334456789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 263 m 263 (576)
T 2acx_A 263 L 263 (576)
T ss_dssp E
T ss_pred E
Confidence 6
No 229
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=98.90 E-value=3.9e-09 Score=102.23 Aligned_cols=80 Identities=15% Similarity=0.257 Sum_probs=68.6
Q ss_pred HhhcccccceeCcc--CcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 402 ATEDFHIKYCIGTG--GYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 402 ~~~~~~~~~~ig~g--~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
..++|...+.||+| +||.||+|+.. +|+.||||++..... .....+.+.+|++++++++|||||++++++.+.+..
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 34679999999999 99999999954 699999999975432 233457789999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
|+||
T Consensus 102 ~lv~ 105 (389)
T 3gni_B 102 WVVT 105 (389)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 230
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=98.89 E-value=1.6e-09 Score=104.65 Aligned_cols=80 Identities=19% Similarity=0.361 Sum_probs=65.8
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||+||+|+.. +++.||+|+++..........+.+.+|..++.++ +|||||++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999954 5889999999765443333445688999999887 89999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 131 V~ 132 (396)
T 4dc2_A 131 VI 132 (396)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 231
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=98.89 E-value=2.4e-09 Score=99.67 Aligned_cols=80 Identities=23% Similarity=0.352 Sum_probs=61.0
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc-----------------------hhhHHHHHHHHHHHh
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE-----------------------LTSLESFRNKARLLS 458 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~-----------------------~~~~~~~~~e~~~l~ 458 (482)
.++|...+.||+|+||.||+|+. .+++.||||++....... ....+.|.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46789999999999999999994 468899999986533211 112356899999999
Q ss_pred cCCCCCccceeEEEEe--CCEEEEEC
Q 036034 459 QIRHRNIVKLYGFCLH--RKCMFLIY 482 (482)
Q Consensus 459 ~l~H~niv~l~g~~~~--~~~~~lv~ 482 (482)
+++|||||++++++.+ .+..|+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~ 117 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVF 117 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEE
Confidence 9999999999999987 56778875
No 232
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=98.89 E-value=1.8e-09 Score=103.76 Aligned_cols=78 Identities=23% Similarity=0.440 Sum_probs=65.5
Q ss_pred hhcccccceeCccCcEEEEEEEc--------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
.++|...+.||+|+||.||+|+. .++..||||+++... .....+.|.+|++++.++ +|||||+++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 46788899999999999999984 235579999996542 234457899999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..|+||
T Consensus 158 ~~~~~~lv~ 166 (370)
T 2psq_A 158 QDGPLYVIV 166 (370)
T ss_dssp SSSSCEEEE
T ss_pred cCCCEEEEE
Confidence 999888885
No 233
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=98.89 E-value=2.8e-09 Score=98.43 Aligned_cols=80 Identities=33% Similarity=0.558 Sum_probs=67.1
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367889999999999999999954 5788999998643322233346799999999999999999999999999999888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 93 ~ 93 (284)
T 2vgo_A 93 L 93 (284)
T ss_dssp E
T ss_pred E
Confidence 5
No 234
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=98.89 E-value=1.2e-09 Score=102.31 Aligned_cols=80 Identities=21% Similarity=0.308 Sum_probs=66.0
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE----
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC---- 477 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 477 (482)
.++|...+.||+|+||.||+|+. .+++.||||++......+....+.|.+|++++.+++|||||++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788999999999999999994 5789999999976544444556789999999999999999999999876543
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 91 ~~lv~ 95 (311)
T 3ork_A 91 PYIVM 95 (311)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 36664
No 235
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=98.89 E-value=4.6e-09 Score=98.34 Aligned_cols=78 Identities=29% Similarity=0.523 Sum_probs=66.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57888999999999999999964 58999999986533 22233567889999999999999999999999999999885
No 236
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=98.89 E-value=2.7e-09 Score=104.89 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=66.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+|+.+|+|++..... .....+.+.+|++++.+++|||||++++++.+++..|+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 456899999999999999999984 5789999999975432 22345679999999999999999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 88 v~ 89 (444)
T 3soa_A 88 IF 89 (444)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 237
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.89 E-value=3.8e-09 Score=105.98 Aligned_cols=81 Identities=25% Similarity=0.386 Sum_probs=64.4
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc----------hhhHHHHHHHHHHHhcCCCCCccceeE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE----------LTSLESFRNKARLLSQIRHRNIVKLYG 470 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~----------~~~~~~~~~e~~~l~~l~H~niv~l~g 470 (482)
..+.|...+.||+|+||.||+|+. .+++.||+|++....... ....+.+.+|++++.+++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 456799999999999999999995 458899999996533221 123467999999999999999999999
Q ss_pred EEEeCCEEEEEC
Q 036034 471 FCLHRKCMFLIY 482 (482)
Q Consensus 471 ~~~~~~~~~lv~ 482 (482)
+|.+++..|+||
T Consensus 114 ~~~~~~~~~lv~ 125 (504)
T 3q5i_A 114 VFEDKKYFYLVT 125 (504)
T ss_dssp EEECSSEEEEEE
T ss_pred EEEcCCEEEEEE
Confidence 999999999986
No 238
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.88 E-value=6e-07 Score=86.43 Aligned_cols=268 Identities=12% Similarity=0.100 Sum_probs=171.4
Q ss_pred CCCCEEeccCCccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEc
Q 036034 5 RNLVHLDLSDNYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDL 84 (482)
Q Consensus 5 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 84 (482)
.+|+.+.+.+ .++.+...+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++.....+|... +|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 4577777775 355556677888899999988754 665666677776 6777776643 443444555543 6888887
Q ss_pred cCCcccccCCccCcCCCCCCEEeCcCCcccccCCccccCCCCCCEEEcccccCc--------------------------
Q 036034 85 SGNEIRGSIPSTFGHLKRLKSLDLSQNKLVGPIPSSLGHLTQLTTLNMRSNLIN-------------------------- 138 (482)
Q Consensus 85 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-------------------------- 138 (482)
..+- ......+|.+ .+|+.+.+..+ +.......+..+.+++.+.+..+...
T Consensus 121 p~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 6542 2122333333 24555444432 22233344555555555544332110
Q ss_pred ----------------ccccCcCEEEcccCeecccCCccCcCCCCCCEEEccCCccccCCCcCCcCCCCCCEEeccCCcc
Q 036034 139 ----------------ASLVNLTSLSLHYNNLTGPIPSTLGHLNRIRILDLSENKLVGPIPSSVGHLTQLNTLNMYSNQI 202 (482)
Q Consensus 139 ----------------~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 202 (482)
....+++.+.+..+ +.......+..+..|+.+.+..+ ++......+..+.+|+.+.+..+ +
T Consensus 198 ~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i 274 (379)
T 4h09_A 198 EFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-V 274 (379)
T ss_dssp EEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-C
T ss_pred ccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-c
Confidence 01345666665443 33234456778899999999876 44455567888999999998765 4
Q ss_pred ccccCccCcCCCCCCeeeccCCcccCCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCccccchhh
Q 036034 203 NGSIPLEIGNLKRVEAVKLYDNKLDGPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFINGKILSEL 282 (482)
Q Consensus 203 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 282 (482)
.......+..+++|+.+.+.++.+.......|.+|.+|+.+.|..+ ++.....+|..+.+|+.+.+..+ +......+|
T Consensus 275 ~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 275 KTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp SEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred eeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 4344567788999999999988877556678999999999999765 55455678899999999988654 443333444
Q ss_pred cCC
Q 036034 283 GAI 285 (482)
Q Consensus 283 ~~~ 285 (482)
..+
T Consensus 353 ~~c 355 (379)
T 4h09_A 353 EGS 355 (379)
T ss_dssp TTS
T ss_pred hCC
Confidence 443
No 239
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=98.88 E-value=4.9e-09 Score=96.71 Aligned_cols=79 Identities=24% Similarity=0.368 Sum_probs=66.8
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccc---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEE---LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
++|...+.||+|+||.||+|+.. +++.||+|.++...... ....+.|.+|++++.+++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999965 68999999986543221 123578999999999999999999999999999988
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 85 lv~ 87 (283)
T 3bhy_A 85 LIL 87 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 240
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=98.88 E-value=2.8e-09 Score=100.77 Aligned_cols=82 Identities=26% Similarity=0.445 Sum_probs=65.0
Q ss_pred HHHhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
....++|...+.||+|+||.||+|+ ..+++.||||++..... .....+.+.+|++++.+++|||||++++++.+.+..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 4456789999999999999999998 45689999999965432 222346688999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 109 ~lv~ 112 (329)
T 3gbz_A 109 HLIF 112 (329)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 241
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.88 E-value=1.3e-09 Score=108.92 Aligned_cols=77 Identities=30% Similarity=0.553 Sum_probs=66.7
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC-CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...+|...+.||+|+||.||+|++.. ++.||||.++.... ..++|.+|++++.+++|||||+++|+|.+.+..||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 45678889999999999999999754 88999999965332 34789999999999999999999999999988888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 294 v~ 295 (495)
T 1opk_A 294 IT 295 (495)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 242
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=98.88 E-value=5.2e-09 Score=96.56 Aligned_cols=79 Identities=20% Similarity=0.419 Sum_probs=67.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++..... .....+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 46789999999999999999995 4689999999865432 233457789999999999999999999999999998887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 84 ~ 84 (284)
T 3kk8_A 84 F 84 (284)
T ss_dssp E
T ss_pred E
Confidence 5
No 243
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.87 E-value=4.1e-09 Score=100.20 Aligned_cols=79 Identities=22% Similarity=0.494 Sum_probs=68.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH--RNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~l 480 (482)
.+.|...+.||+|+||.||++...+++.||||++..... .....+.|.+|++++.+++| ||||++++++.+++..|+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 356888999999999999999988899999999865432 33445789999999999986 999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 v~ 88 (343)
T 3dbq_A 87 VM 88 (343)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 244
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=98.87 E-value=2.6e-09 Score=97.94 Aligned_cols=79 Identities=33% Similarity=0.620 Sum_probs=61.3
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccc-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEE-LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. ++.+|||++....... ....+.+.+|++++.+++||||++++++|.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999974 8899999986543222 23357799999999999999999999999999888887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 85 ~ 85 (271)
T 3dtc_A 85 M 85 (271)
T ss_dssp E
T ss_pred E
Confidence 5
No 245
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=98.86 E-value=5.6e-09 Score=98.27 Aligned_cols=80 Identities=23% Similarity=0.315 Sum_probs=67.3
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccc---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEE---LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.+.|...+.||+|+||.||+|+.. +|+.||+|.+....... ....+.|.+|++++.+++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457889999999999999999954 68999999996543222 12357899999999999999999999999999999
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 91 ~lv~ 94 (321)
T 2a2a_A 91 VLIL 94 (321)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 246
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=98.86 E-value=4.9e-09 Score=98.62 Aligned_cols=77 Identities=23% Similarity=0.394 Sum_probs=64.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--EEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK--CMFL 480 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~l 480 (482)
+.|...+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++.+++|||||++++++.+.+ ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 56888999999999999999964 589999999964332 223577889999999999999999999998765 6677
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 v~ 88 (319)
T 4euu_A 87 IM 88 (319)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 247
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=98.86 E-value=6.5e-09 Score=95.56 Aligned_cols=77 Identities=21% Similarity=0.378 Sum_probs=66.1
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. ++..+|+|++..... ...+.|.+|++++.+++||||++++++|.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 467899999999999999999954 578999999865332 2347899999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 85 ~ 85 (277)
T 3f3z_A 85 M 85 (277)
T ss_dssp E
T ss_pred E
Confidence 5
No 248
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.86 E-value=2.6e-09 Score=102.37 Aligned_cols=88 Identities=20% Similarity=0.373 Sum_probs=71.1
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEecccccc--------chhhHHHHHHHHHHHhcCCCCCcc
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETE--------ELTSLESFRNKARLLSQIRHRNIV 466 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~--------~~~~~~~~~~e~~~l~~l~H~niv 466 (482)
..+++....++|...+.||+|+||.||+|+..+|+.||||++...... +....+.|.+|++++.+++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778888999999999999999999999878999999998543221 112247799999999999999999
Q ss_pred ceeEEEEeCC-----EEEEEC
Q 036034 467 KLYGFCLHRK-----CMFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~-----~~~lv~ 482 (482)
++++++...+ ..|+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~ 113 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVT 113 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEE
T ss_pred ceeeeEEeccCCCcceEEEEE
Confidence 9999996532 467764
No 249
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=98.86 E-value=3.2e-09 Score=106.53 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=68.6
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||+||+|+.. +|+.||+|++...........+.+.+|++++.+++|||||++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999964 6999999999654433334457899999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 264 m 264 (543)
T 3c4z_A 264 M 264 (543)
T ss_dssp E
T ss_pred E
Confidence 6
No 250
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.85 E-value=1.7e-09 Score=106.71 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=59.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|++.............+.+|++++.+++|||||+++++|.+.+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999994 56899999999654333333446788999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 227 ~ 227 (446)
T 4ejn_A 227 M 227 (446)
T ss_dssp E
T ss_pred E
Confidence 6
No 251
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=98.85 E-value=2.2e-09 Score=101.88 Aligned_cols=83 Identities=20% Similarity=0.339 Sum_probs=67.5
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 477 (482)
....++|...+.||+|+||+||+|+.. +|+.||+|+++..........+.+..|.+++..+ +|||||++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999964 6899999999754322233456788899999876 89999999999999999
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 93 ~~lv~ 97 (345)
T 1xjd_A 93 LFFVM 97 (345)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 252
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.85 E-value=4.7e-09 Score=101.58 Aligned_cols=78 Identities=22% Similarity=0.499 Sum_probs=67.2
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC--CCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR--HRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv 481 (482)
..|...+.||+|+||.||+|+...++.||||++..... .....+.|.+|++++.+++ |||||++++++...+..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45889999999999999999987799999999965432 3344578999999999996 59999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 135 ~ 135 (390)
T 2zmd_A 135 M 135 (390)
T ss_dssp E
T ss_pred E
Confidence 6
No 253
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=98.85 E-value=3.4e-09 Score=101.02 Aligned_cols=76 Identities=25% Similarity=0.335 Sum_probs=59.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..+.|...+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++.+++|||||+++++|.+.+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3467889999999999999999965 58899999986432 23568899999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 126 v~ 127 (349)
T 2w4o_A 126 VL 127 (349)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 254
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=98.85 E-value=2.8e-09 Score=101.31 Aligned_cols=80 Identities=31% Similarity=0.509 Sum_probs=67.2
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
...++|...+.||+|+||.||+|+.. +++.||+|.++... .....+.|.+|++++.+++|||||+++++|.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 34678999999999999999999963 34789999996533 22345779999999999999999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..++||
T Consensus 122 ~~~~~lv~ 129 (343)
T 1luf_A 122 GKPMCLLF 129 (343)
T ss_dssp SSSCEEEE
T ss_pred CCceEEEE
Confidence 88888885
No 255
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=98.85 E-value=2.7e-09 Score=105.50 Aligned_cols=77 Identities=23% Similarity=0.474 Sum_probs=64.8
Q ss_pred HHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...++|...+.||+|+||.||+|++..+..||||+++.... ..++|.+|++++.+++|||||+++++|.+ +..++
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 34567888999999999999999988778899999975432 23689999999999999999999999876 56677
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 256 v~ 257 (452)
T 1fmk_A 256 VT 257 (452)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 256
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=98.85 E-value=2.3e-09 Score=98.18 Aligned_cols=78 Identities=17% Similarity=0.286 Sum_probs=65.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~l 480 (482)
.++|...+.||+|+||.||+|+.. ++.+|||++..... .....+.|.+|++++.+++|||||+++++|.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 357888999999999999999984 88999999975432 233457799999999999999999999999887 66677
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 v~ 88 (271)
T 3kmu_A 87 IT 88 (271)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 257
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=98.85 E-value=5.3e-09 Score=100.55 Aligned_cols=74 Identities=20% Similarity=0.379 Sum_probs=57.9
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+...+.||+|+||.||+|+. .+|+.||+|+++.... ...+.|.+|++++.+++|||||+++++|.+.+..++||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 165 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM 165 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 33457899999999999995 5699999999865332 34468999999999999999999999999999999986
No 258
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=98.84 E-value=6e-09 Score=102.92 Aligned_cols=75 Identities=25% Similarity=0.529 Sum_probs=64.1
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-EEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-CMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~l 480 (482)
..++|...+.||+|+||.||+|++. |+.||||.++... ..+.|.+|++++.+++|||||+++++|.+.+ ..|+
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3467888999999999999999984 7899999997532 2368999999999999999999999998765 6788
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 265 v~ 266 (450)
T 1k9a_A 265 VT 266 (450)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 259
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.84 E-value=6.5e-09 Score=98.32 Aligned_cols=79 Identities=30% Similarity=0.565 Sum_probs=66.8
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|++++.+++|||||+++++|.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 457888999999999999999954 58999999986433 2223346688999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 103 ~ 103 (331)
T 4aaa_A 103 F 103 (331)
T ss_dssp E
T ss_pred E
Confidence 5
No 260
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=98.84 E-value=8.2e-09 Score=99.62 Aligned_cols=77 Identities=21% Similarity=0.343 Sum_probs=66.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|...+.||+|+||.||+|+. .+|+.+|+|.+..... .....+.+|++++.+++|||||++++++.+.+..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999995 4689999999864322 2345789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 127 ~ 127 (387)
T 1kob_A 127 L 127 (387)
T ss_dssp E
T ss_pred E
Confidence 5
No 261
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=98.84 E-value=8.2e-09 Score=94.77 Aligned_cols=79 Identities=24% Similarity=0.414 Sum_probs=67.4
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++.+++||||+++++++.+.+..|+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 3468999999999999999999954 689999999864332 2344779999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 83 v~ 84 (276)
T 2yex_A 83 FL 84 (276)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 262
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=98.84 E-value=3.5e-09 Score=106.86 Aligned_cols=77 Identities=23% Similarity=0.474 Sum_probs=65.0
Q ss_pred HHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
...++|...+.||+|+||.||+|++..+..||||+++.... ..++|.+|+++|.+++|||||+++++|.+ +..||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 34567888999999999999999988778899999975432 23689999999999999999999999876 56777
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 339 v~ 340 (535)
T 2h8h_A 339 VT 340 (535)
T ss_dssp EE
T ss_pred ee
Confidence 75
No 263
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=98.83 E-value=1.3e-09 Score=100.85 Aligned_cols=78 Identities=29% Similarity=0.529 Sum_probs=66.8
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
...++|...+.||+|+||.||+|+.. +++.||+|.+.... ...+.|.+|++++.+++||||+++++++.+.+..+
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 35578999999999999999999965 48899999986432 23478999999999999999999999999988888
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 86 ~v~ 88 (288)
T 3kfa_A 86 IIT 88 (288)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 264
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=98.83 E-value=1.1e-08 Score=94.55 Aligned_cols=80 Identities=19% Similarity=0.298 Sum_probs=67.8
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||.||+|+.. +++.||+|++...... .....++.+|+..+.++ +|||||++++++.+.+..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 4578999999999999999999964 7999999998754322 23446788999999999 8999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 88 lv~ 90 (289)
T 1x8b_A 88 IQN 90 (289)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 265
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.83 E-value=7.4e-09 Score=96.34 Aligned_cols=78 Identities=35% Similarity=0.533 Sum_probs=63.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|++++.+++||||+++++++.+++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57888999999999999999954 6899999998643322 222367889999999999999999999999999999885
No 266
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.83 E-value=6.4e-09 Score=104.05 Aligned_cols=79 Identities=24% Similarity=0.402 Sum_probs=62.5
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|...+.||+|+||.||+|+.. +++.+|+|++....... ...+.+.+|++++.+++|||||+++++|.+.+..|+|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 457999999999999999999954 68899999996543222 2246789999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 115 ~ 115 (494)
T 3lij_A 115 M 115 (494)
T ss_dssp E
T ss_pred E
Confidence 5
No 267
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.83 E-value=1.8e-09 Score=102.24 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=66.7
Q ss_pred HhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccch-----hhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEEL-----TSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
..++|...+.||+|+||.||+|+ ..+++.||||++........ ...+.+.+|++++.+++|||||+++++|.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45689999999999999999998 45689999999975432211 1234577899999999999999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 102 ~~~~lv~ 108 (335)
T 3dls_A 102 GFFQLVM 108 (335)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9998885
No 268
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.83 E-value=5.1e-09 Score=104.57 Aligned_cols=80 Identities=19% Similarity=0.382 Sum_probs=67.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+|+. .+++.||||++...... ....+.+.+|++++.+++|||||++++++.+.+..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 346799999999999999999995 46899999998643222 2335789999999999999999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 99 v~ 100 (486)
T 3mwu_A 99 VG 100 (486)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 269
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=98.83 E-value=1e-08 Score=94.81 Aligned_cols=81 Identities=19% Similarity=0.384 Sum_probs=68.5
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
...++|...+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 34578999999999999999999964 6899999998653322 234578999999999999999999999999999988
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 98 lv~ 100 (287)
T 2wei_A 98 IVG 100 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 270
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=98.82 E-value=3.4e-09 Score=101.77 Aligned_cols=78 Identities=26% Similarity=0.397 Sum_probs=64.9
Q ss_pred hhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++|...+.||+|+||.||+|++. +++.||||+++... .......|.+|+.++++++|||||++++++.+.+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 367888999999999999999943 36689999986432 2234467999999999999999999999999988
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 148 ~~~lv~ 153 (367)
T 3l9p_A 148 PRFILL 153 (367)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 888885
No 271
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=98.82 E-value=1e-08 Score=95.95 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=62.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (482)
++|...+.||+|+||+||+|+.. +|+.||||++...... ......+..|+..+.++ +|||||+++++|.+++..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC-hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999965 7999999998643322 22334556666666555 899999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 136 ~ 136 (311)
T 3p1a_A 136 T 136 (311)
T ss_dssp E
T ss_pred E
Confidence 6
No 272
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.82 E-value=2.5e-09 Score=101.94 Aligned_cols=79 Identities=20% Similarity=0.385 Sum_probs=67.0
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchh--------------hHHHHHHHHHHHhcCCCCCccce
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELT--------------SLESFRNKARLLSQIRHRNIVKL 468 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~--------------~~~~~~~e~~~l~~l~H~niv~l 468 (482)
.++|...+.||+|+||.||+|+. +|+.||+|++......... ..+.|.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999998643222111 12789999999999999999999
Q ss_pred eEEEEeCCEEEEEC
Q 036034 469 YGFCLHRKCMFLIY 482 (482)
Q Consensus 469 ~g~~~~~~~~~lv~ 482 (482)
++++.+.+..++||
T Consensus 109 ~~~~~~~~~~~lv~ 122 (348)
T 2pml_X 109 EGIITNYDEVYIIY 122 (348)
T ss_dssp SEEEESSSEEEEEE
T ss_pred EEEEeeCCeEEEEE
Confidence 99999999999986
No 273
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.82 E-value=3.6e-09 Score=100.78 Aligned_cols=82 Identities=23% Similarity=0.414 Sum_probs=60.1
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccch--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEEL--TSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
...++|...+.||+|+||.||+|+.. +|+.||||++........ ...+.+.+|++++.+++|||||++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999964 589999999864322211 112468899999999999999999999999888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 87 ~~lv~ 91 (346)
T 1ua2_A 87 ISLVF 91 (346)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 88875
No 274
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=98.81 E-value=2.3e-09 Score=102.58 Aligned_cols=87 Identities=21% Similarity=0.347 Sum_probs=68.9
Q ss_pred ccHHHHHHHhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCcc
Q 036034 394 ITFQDIIEATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIV 466 (482)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv 466 (482)
+...++....++|...+.||+|+||.||+|++ .+++.||||+++... .....+.|.+|++++.++ +|||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCccee
Confidence 34455666778999999999999999999973 246789999996432 223446799999999999 799999
Q ss_pred ceeEEEEeCCE-EEEEC
Q 036034 467 KLYGFCLHRKC-MFLIY 482 (482)
Q Consensus 467 ~l~g~~~~~~~-~~lv~ 482 (482)
+++++|.+.+. .++||
T Consensus 90 ~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIV 106 (359)
T ss_dssp CEEEEECSTTSCCEEEE
T ss_pred eeeeeeecCCCceEEEE
Confidence 99999988654 67764
No 275
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=98.81 E-value=4e-09 Score=101.28 Aligned_cols=80 Identities=21% Similarity=0.297 Sum_probs=58.2
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARL-LSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||+||+|+.. +++.||+|+++..........+.+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999964 588999999976544333344567778776 577899999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 117 v~ 118 (373)
T 2r5t_A 117 VL 118 (373)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 276
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=98.81 E-value=3.8e-09 Score=99.97 Aligned_cols=82 Identities=26% Similarity=0.427 Sum_probs=66.8
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEcC-CC-----CEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARLP-SG-----KVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGF 471 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~-----~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~ 471 (482)
+....++|...+.||+|+||.||+|+.. .+ ..||+|.+.... .....+.+.+|++++.++ +|||||+++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 3344578999999999999999999853 22 479999986533 223457799999999999 89999999999
Q ss_pred EEeCCEEEEEC
Q 036034 472 CLHRKCMFLIY 482 (482)
Q Consensus 472 ~~~~~~~~lv~ 482 (482)
|.+.+..++||
T Consensus 119 ~~~~~~~~lv~ 129 (333)
T 2i1m_A 119 CTHGGPVLVIT 129 (333)
T ss_dssp ECSSSSCEEEE
T ss_pred EecCCceEEEE
Confidence 99998888885
No 277
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=98.81 E-value=4.7e-09 Score=99.99 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=68.1
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||+||+|+.. +++.||+|+++..........+.+..|.+++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999965 4889999999754333334457789999999988 7999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 98 lv~ 100 (353)
T 2i0e_A 98 FVM 100 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 278
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=98.81 E-value=9e-09 Score=99.90 Aligned_cols=77 Identities=23% Similarity=0.394 Sum_probs=64.1
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--EEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK--CMFL 480 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~l 480 (482)
+.|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++.+++|||||++++++.+.+ ..++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 57888999999999999999964 589999999964332 233577889999999999999999999998765 6677
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 87 v~ 88 (396)
T 4eut_A 87 IM 88 (396)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 279
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=98.80 E-value=4.7e-09 Score=98.88 Aligned_cols=75 Identities=20% Similarity=0.296 Sum_probs=61.1
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----EE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK----CM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 478 (482)
.++|...+.||+|+||.||+|+.. ++.||||++.... .....+.+|+.++.+++|||||++++++.+.. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 367889999999999999999975 7899999986432 22355677999999999999999999998854 35
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 98 ~lv~ 101 (322)
T 3soc_A 98 WLIT 101 (322)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6764
No 280
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=98.80 E-value=7.8e-09 Score=98.98 Aligned_cols=78 Identities=22% Similarity=0.292 Sum_probs=67.1
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|++++.+++|||||++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 357888999999999999999954 68999999986542 233457799999999999999999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 110 ~ 110 (360)
T 3eqc_A 110 M 110 (360)
T ss_dssp E
T ss_pred E
Confidence 6
No 281
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=98.80 E-value=5.8e-09 Score=97.76 Aligned_cols=79 Identities=25% Similarity=0.466 Sum_probs=66.1
Q ss_pred HhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
..++|...+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|++++.+++|||||++++++.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 356788899999999999999984 235789999986432 234457899999999999999999999999998
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 99 ~~~~lv~ 105 (314)
T 2ivs_A 99 GPLLLIV 105 (314)
T ss_dssp SSCEEEE
T ss_pred CceEEEE
Confidence 8888875
No 282
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=98.80 E-value=1e-08 Score=95.63 Aligned_cols=78 Identities=26% Similarity=0.415 Sum_probs=64.4
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..++|...+.||+|+||.||+++. .+|+.||+|.+..... ...+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 346788999999999999999995 4689999999964322 223578899999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 84 v~ 85 (304)
T 2jam_A 84 VM 85 (304)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 283
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=98.80 E-value=3.6e-09 Score=97.42 Aligned_cols=76 Identities=25% Similarity=0.479 Sum_probs=63.0
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
..++|...+.||+|+||.||+|+..+++.||+|.+..... ..+.|.+|++++.+++||||+++++++.+. ..++|
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v 85 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcCC-CcEEE
Confidence 3467889999999999999999987788999999864332 246799999999999999999999998644 45665
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 86 ~ 86 (279)
T 1qpc_A 86 T 86 (279)
T ss_dssp E
T ss_pred E
Confidence 4
No 284
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=98.80 E-value=1.4e-08 Score=94.77 Aligned_cols=78 Identities=29% Similarity=0.455 Sum_probs=66.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.+.|...+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 35688889999999999999984 46899999999654322 3457899999999999999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 99 ~ 99 (303)
T 3a7i_A 99 M 99 (303)
T ss_dssp E
T ss_pred E
Confidence 5
No 285
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.79 E-value=4.4e-09 Score=104.27 Aligned_cols=78 Identities=26% Similarity=0.479 Sum_probs=55.7
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR-----KC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 477 (482)
++|...+.||+|+||.||+|+. .+++.||||++.... .+....+.+.+|++++.+++|||||+++++|... +.
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 6799999999999999999985 468999999986432 2334457899999999999999999999999543 45
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 132 ~~lv~ 136 (458)
T 3rp9_A 132 LYVVL 136 (458)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77775
No 286
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.79 E-value=2.5e-09 Score=100.90 Aligned_cols=77 Identities=26% Similarity=0.437 Sum_probs=62.2
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. +++.||+|++....... ....+.+|++++.+++|||||++++++.+.+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc--cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 46888999999999999999954 68999999986433211 1124567999999999999999999999999999886
No 287
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.79 E-value=6.6e-09 Score=96.95 Aligned_cols=80 Identities=19% Similarity=0.343 Sum_probs=63.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccc-hhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEE-LTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 478 (482)
.++|...+.||+|+||.||+++. .+++.+|+|++....... ....+.|.+|++++.+++||||+++++++.. .+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46799999999999999999995 468899999996432221 2345779999999999999999999999854 4567
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 84 ~lv~ 87 (305)
T 2wtk_C 84 YMVM 87 (305)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7774
No 288
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=98.79 E-value=1.6e-08 Score=94.96 Aligned_cols=76 Identities=21% Similarity=0.373 Sum_probs=62.5
Q ss_pred cccccceeCccCcEEEEEEEcC-----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--KC 477 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~ 477 (482)
.|...+.||+|+||.||++.+. +++.||||++.... .....+.|.+|++++.+++|||||++++++.+. ..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 4588899999999999998742 57889999997542 233457799999999999999999999999884 56
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 110 ~~lv~ 114 (318)
T 3lxp_A 110 LQLVM 114 (318)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77775
No 289
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=98.78 E-value=1.6e-08 Score=93.76 Aligned_cols=74 Identities=20% Similarity=0.340 Sum_probs=61.1
Q ss_pred ccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 406 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 406 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
|.....||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 44455899999999999994 568899999986532 223467999999999999999999999999999998885
No 290
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=98.78 E-value=1.6e-08 Score=93.06 Aligned_cols=79 Identities=27% Similarity=0.570 Sum_probs=65.3
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RKCMF 479 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 479 (482)
.++|...+.||+|+||.||+|+.. +++.||+|.+..... .....+.|.+|++++++++||||+++++++.+ .+..+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 467899999999999999999954 689999999975432 22345779999999999999999999998865 45677
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 84 lv~ 86 (279)
T 2w5a_A 84 IVM 86 (279)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 291
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=98.78 E-value=2.2e-09 Score=101.10 Aligned_cols=84 Identities=20% Similarity=0.357 Sum_probs=68.9
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcC------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeE
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYG 470 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g 470 (482)
+++....++|...+.||+|+||.||+|+.. .++.||+|.+.... .......|.+|++++.+++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 344556688999999999999999999853 36789999986432 2234467999999999999999999999
Q ss_pred EEEeCCEEEEEC
Q 036034 471 FCLHRKCMFLIY 482 (482)
Q Consensus 471 ~~~~~~~~~lv~ 482 (482)
++.+.+..++||
T Consensus 96 ~~~~~~~~~lv~ 107 (322)
T 1p4o_A 96 VVSQGQPTLVIM 107 (322)
T ss_dssp EECSSSSCEEEE
T ss_pred EEccCCccEEEE
Confidence 999988888875
No 292
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.77 E-value=8.8e-09 Score=101.17 Aligned_cols=79 Identities=27% Similarity=0.487 Sum_probs=65.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR-----K 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 476 (482)
.++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+.+|++++.+++|||||++++++... +
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 46799999999999999999995 468899999996432 2334457899999999999999999999999776 5
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 104 ~~~lv~ 109 (432)
T 3n9x_A 104 ELYIVL 109 (432)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 678775
No 293
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=98.77 E-value=6.4e-09 Score=97.42 Aligned_cols=79 Identities=29% Similarity=0.425 Sum_probs=66.1
Q ss_pred HhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 474 (482)
..++|...+.||+|+||.||+|+. .+++.||+|++.... .....+.|.+|++++.++ +||||++++++|.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 346788999999999999999984 346789999996433 223457899999999999 89999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
++..++||
T Consensus 99 ~~~~~lv~ 106 (313)
T 1t46_A 99 GGPTLVIT 106 (313)
T ss_dssp SSSCEEEE
T ss_pred CCCcEEEE
Confidence 88888875
No 294
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.77 E-value=6.5e-09 Score=100.45 Aligned_cols=69 Identities=25% Similarity=0.373 Sum_probs=54.7
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
....++|...+.||+|+||.||+|+. .+|+.||+|++..+.. ...+|+++++.++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~ 72 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTT 72 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeec
Confidence 44567899999999999999999984 5799999999864321 223799999999999999999998553
No 295
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.77 E-value=4.2e-09 Score=100.89 Aligned_cols=85 Identities=24% Similarity=0.327 Sum_probs=70.0
Q ss_pred ccHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-----CCCccc
Q 036034 394 ITFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-----HRNIVK 467 (482)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~ 467 (482)
+++.+.....++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+..|++++.+++ |||||+
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH----HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch----hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44444455567899999999999999999995 568999999986422 23466788999999886 999999
Q ss_pred eeEEEEeCCEEEEEC
Q 036034 468 LYGFCLHRKCMFLIY 482 (482)
Q Consensus 468 l~g~~~~~~~~~lv~ 482 (482)
+++++...+..++||
T Consensus 101 ~~~~~~~~~~~~lv~ 115 (360)
T 3llt_A 101 YHGKFMYYDHMCLIF 115 (360)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred ccceeeECCeeEEEE
Confidence 999999999999985
No 296
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=98.77 E-value=1.5e-08 Score=94.40 Aligned_cols=77 Identities=26% Similarity=0.408 Sum_probs=61.0
Q ss_pred hcccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--C
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--K 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 476 (482)
..|...+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|++++.+++||||+++++++.+. +
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 4588889999999999999983 358899999997543 223457899999999999999999999999876 5
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 99 ~~~lv~ 104 (302)
T 4e5w_A 99 GIKLIM 104 (302)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 567764
No 297
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=98.77 E-value=7.6e-09 Score=97.97 Aligned_cols=78 Identities=23% Similarity=0.450 Sum_probs=64.6
Q ss_pred hhcccccceeCccCcEEEEEEEc--------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|++++.++ +||||++++++|.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 46889999999999999999985 246789999996432 233457799999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..++||
T Consensus 112 ~~~~~~lv~ 120 (334)
T 2pvf_A 112 QDGPLYVIV 120 (334)
T ss_dssp SSSCCEEEE
T ss_pred cCCceEEEE
Confidence 998888885
No 298
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=98.77 E-value=1.8e-08 Score=96.54 Aligned_cols=87 Identities=23% Similarity=0.312 Sum_probs=70.1
Q ss_pred HHHHHHHhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccc-----hhhHHHHHHHHHHHhcC-CCCCccce
Q 036034 396 FQDIIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEE-----LTSLESFRNKARLLSQI-RHRNIVKL 468 (482)
Q Consensus 396 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~~~~e~~~l~~l-~H~niv~l 468 (482)
........++|...+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.++.++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999964 69999999986533111 11245688999999999 79999999
Q ss_pred eEEEEeCCEEEEEC
Q 036034 469 YGFCLHRKCMFLIY 482 (482)
Q Consensus 469 ~g~~~~~~~~~lv~ 482 (482)
++++...+..|+||
T Consensus 166 ~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 166 IDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEEBSSEEEEEE
T ss_pred EEEEeeCCEEEEEE
Confidence 99999999999986
No 299
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=98.77 E-value=2e-08 Score=94.17 Aligned_cols=76 Identities=26% Similarity=0.532 Sum_probs=60.3
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..+.|...+.||+|+||.||+|+.. +|+.||+|.+.... ..+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4567889999999999999999964 58999999986432 23678999999999999999999999999999988
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 102 v~ 103 (314)
T 3com_A 102 VM 103 (314)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 300
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.76 E-value=8.2e-09 Score=100.92 Aligned_cols=81 Identities=17% Similarity=0.301 Sum_probs=62.3
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc-----chhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE-----ELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
...++|...+.||+|+||.||+|+. .+++.||||++...... .......|.+|++++.+++|||||++++++.+
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999999999999985 46899999998643221 11122358899999999999999999999854
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
+..|+||
T Consensus 212 -~~~~lv~ 218 (419)
T 3i6u_A 212 -EDYYIVL 218 (419)
T ss_dssp -SEEEEEE
T ss_pred -CceEEEE
Confidence 5567775
No 301
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=98.76 E-value=1.2e-08 Score=95.07 Aligned_cols=78 Identities=27% Similarity=0.462 Sum_probs=64.4
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
..+.|...+.||+|+||.||+|+.. +++.+|+|.+.... ....+.|.+|++++.+++||||+++++++.+.+..++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 3467888999999999999999964 58999999986432 2345789999999999999999999999999988888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 94 v~ 95 (302)
T 2j7t_A 94 MI 95 (302)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 302
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=98.76 E-value=1.2e-08 Score=94.45 Aligned_cols=77 Identities=26% Similarity=0.458 Sum_probs=64.1
Q ss_pred hhcccccceeCccCcEEEEEEEcCC-C-------CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPS-G-------KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~-~-------~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
.++|...+.||+|+||.||+|+... + +.||+|.+.... ....+.|.+|++++++++|||||+++++|.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 3578889999999999999998532 3 479999986432 2345789999999999999999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
++..++||
T Consensus 84 ~~~~~lv~ 91 (289)
T 4fvq_A 84 GDENILVQ 91 (289)
T ss_dssp TTCCEEEE
T ss_pred CCCCEEEE
Confidence 98888875
No 303
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.76 E-value=1.4e-08 Score=97.54 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=65.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK----- 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 476 (482)
.++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+.+|+.++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 36788999999999999999984 468899999996432 22334567899999999999999999999998765
Q ss_pred -EEEEEC
Q 036034 477 -CMFLIY 482 (482)
Q Consensus 477 -~~~lv~ 482 (482)
..|+||
T Consensus 103 ~~~~lv~ 109 (371)
T 2xrw_A 103 QDVYIVM 109 (371)
T ss_dssp CEEEEEE
T ss_pred cceEEEE
Confidence 677775
No 304
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=98.76 E-value=1.3e-08 Score=95.92 Aligned_cols=80 Identities=19% Similarity=0.319 Sum_probs=60.6
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc-----chhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE-----ELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
..++|...+.||+|+||.||+|+. .+++.||||.+...... .......|.+|++++.+++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346799999999999999999995 45889999998643221 112234588999999999999999999999766
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+ .|+||
T Consensus 88 ~-~~lv~ 93 (322)
T 2ycf_A 88 D-YYIVL 93 (322)
T ss_dssp S-EEEEE
T ss_pred c-eEEEE
Confidence 5 66664
No 305
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=98.76 E-value=8.2e-09 Score=99.67 Aligned_cols=78 Identities=23% Similarity=0.431 Sum_probs=65.0
Q ss_pred hhcccccceeCccCcEEEEEEEc--------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
.++|...+.||+|+||.||+|+. ..+..||||++.... .....+.+.+|++++.++ +|||||+++++|.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 46788899999999999999984 123579999996542 233457899999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+++..++||
T Consensus 146 ~~~~~~lv~ 154 (382)
T 3tt0_A 146 QDGPLYVIV 154 (382)
T ss_dssp SSSSCEEEE
T ss_pred cCCceEEEE
Confidence 998888885
No 306
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=98.76 E-value=2.4e-08 Score=93.65 Aligned_cols=76 Identities=17% Similarity=0.273 Sum_probs=63.1
Q ss_pred hcccc-cceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 404 EDFHI-KYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 404 ~~~~~-~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
+.|.. .+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..|+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 45666 37799999999999994 468999999996532 22346789999999985 79999999999999999999
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 89 v~ 90 (316)
T 2ac3_A 89 VF 90 (316)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 307
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.76 E-value=1.5e-08 Score=96.60 Aligned_cols=79 Identities=25% Similarity=0.495 Sum_probs=64.6
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR------ 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 475 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|++...... ......+.+|++++.+++|||||+++++|.+.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 46799999999999999999995 57899999998654322 22336788999999999999999999999884
Q ss_pred --CEEEEEC
Q 036034 476 --KCMFLIY 482 (482)
Q Consensus 476 --~~~~lv~ 482 (482)
+..|+||
T Consensus 95 ~~~~~~lv~ 103 (351)
T 3mi9_A 95 CKGSIYLVF 103 (351)
T ss_dssp --CEEEEEE
T ss_pred CCceEEEEE
Confidence 3567775
No 308
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=98.76 E-value=1.3e-08 Score=94.60 Aligned_cols=81 Identities=21% Similarity=0.257 Sum_probs=66.7
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEecccccc------chhhHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETE------ELTSLESFRNKARLLSQIR-HRNIVKLYGFCL 473 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~------~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~ 473 (482)
..++|...+.||+|+||.||+|+.. +|+.||+|.++..... .....+.+.+|++++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999954 6899999999654311 1123467889999999996 999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..++||
T Consensus 95 ~~~~~~lv~ 103 (298)
T 1phk_A 95 TNTFFFLVF 103 (298)
T ss_dssp CSSEEEEEE
T ss_pred cCCeEEEEE
Confidence 999999885
No 309
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.76 E-value=7.3e-09 Score=102.58 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=64.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR------ 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 475 (482)
.++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+.+|++++++++|||||++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 46788999999999999999984 468999999996532 2334457889999999999999999999999765
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 140 ~~~~lv~ 146 (464)
T 3ttj_A 140 QDVYLVM 146 (464)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 3567775
No 310
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=98.75 E-value=8.3e-09 Score=95.82 Aligned_cols=76 Identities=34% Similarity=0.570 Sum_probs=62.1
Q ss_pred hcccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--C
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR--K 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 476 (482)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++.+++|||||+++++|.+. .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 6788899999999999999984 25789999998643 233457899999999999999999999998653 3
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 87 ~~~lv~ 92 (295)
T 3ugc_A 87 NLKLIM 92 (295)
T ss_dssp SCEEEE
T ss_pred ceEEEE
Confidence 466664
No 311
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=98.75 E-value=1.7e-08 Score=93.34 Aligned_cols=75 Identities=35% Similarity=0.581 Sum_probs=61.2
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhh----HHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTS----LESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~----~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++|...+.||+|+||.||+|+. .+++.||+|++.......... .+.|.+|++++.+++||||+++++++.+...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 6788899999999999999995 578999999986543322211 26799999999999999999999999776643
No 312
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=98.75 E-value=6.5e-09 Score=98.03 Aligned_cols=84 Identities=24% Similarity=0.531 Sum_probs=68.0
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFC 472 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 472 (482)
++.++....+.|...+.||+|+||.||+|+. .+|+.||+|++..... ..+.+.+|++++.++ +||||+++++++
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 3444555678899999999999999999995 5789999999864332 236788999999998 799999999999
Q ss_pred Ee------CCEEEEEC
Q 036034 473 LH------RKCMFLIY 482 (482)
Q Consensus 473 ~~------~~~~~lv~ 482 (482)
.. .+..++||
T Consensus 91 ~~~~~~~~~~~~~lv~ 106 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVM 106 (326)
T ss_dssp EECC--CCCCEEEEEE
T ss_pred eeccCccccceEEEEE
Confidence 87 45677775
No 313
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=98.75 E-value=1.5e-08 Score=94.39 Aligned_cols=69 Identities=26% Similarity=0.459 Sum_probs=59.0
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
..++|...+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|++++.+++||||++++++|.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 73 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHh
Confidence 346799999999999999999995 47999999998532 2344779999999999999999999999876
No 314
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=98.75 E-value=1.8e-08 Score=94.93 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=58.9
Q ss_pred cceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+.||+|+||.||+|+. .+++.||||++... ....+.+|++++.++. |||||++++++.+++..|+||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 37799999999999995 46899999998532 2356789999999997 999999999999999999986
No 315
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=98.74 E-value=1.5e-08 Score=95.38 Aligned_cols=76 Identities=26% Similarity=0.451 Sum_probs=54.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC-C---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS-G---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~-~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
..++|...+.||+|+||.||+|+... + ..||||+++.... .....+.|.+|++++++++|||||++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 45678999999999999999999643 3 2799999865332 22345789999999999999999999999988765
Q ss_pred E
Q 036034 478 M 478 (482)
Q Consensus 478 ~ 478 (482)
.
T Consensus 100 ~ 100 (323)
T 3qup_A 100 K 100 (323)
T ss_dssp -
T ss_pred c
Confidence 4
No 316
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=98.74 E-value=2.9e-08 Score=91.86 Aligned_cols=78 Identities=24% Similarity=0.428 Sum_probs=62.6
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~ 478 (482)
..|...+.||+|+||.||+|.. .++..||+|.+..... .....+.|.+|++++.+++|||||++++++.+ .+..
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 3467788899999999999995 4688999999864332 23345789999999999999999999999876 3456
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 105 ~lv~ 108 (290)
T 1t4h_A 105 VLVT 108 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 317
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.74 E-value=2.4e-08 Score=92.36 Aligned_cols=79 Identities=19% Similarity=0.364 Sum_probs=62.0
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .+|+.||+|++...... ....+.+.++...+..++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46789999999999999999995 57899999999653222 22234455566668889999999999999999988888
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 85 ~ 85 (290)
T 3fme_A 85 M 85 (290)
T ss_dssp E
T ss_pred E
Confidence 5
No 318
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=98.73 E-value=1.1e-08 Score=96.67 Aligned_cols=78 Identities=27% Similarity=0.427 Sum_probs=62.7
Q ss_pred hhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
.++|...+.||+|+||.||+|+. .+++.||||++.... ......+|.+|+.++.+++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46789999999999999999984 246789999996432 2234467999999999999999999999999988
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 107 ~~~lv~ 112 (327)
T 2yfx_A 107 PRFILM 112 (327)
T ss_dssp SCEEEE
T ss_pred CcEEEE
Confidence 888875
No 319
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.73 E-value=2.7e-08 Score=91.95 Aligned_cols=76 Identities=26% Similarity=0.462 Sum_probs=60.1
Q ss_pred hcccccc-eeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKY-CIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~-~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
++|.... .||+|+||.||+|+.. .++.||+|+++... .....+.+.+|++++.+++||||+++++++ +.+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 4455554 8999999999999853 57789999997532 234457899999999999999999999999 455566
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 86 lv~ 88 (287)
T 1u59_A 86 LVM 88 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 320
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.73 E-value=2.3e-08 Score=94.93 Aligned_cols=79 Identities=19% Similarity=0.399 Sum_probs=63.4
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARL-LSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||.||+|+. .+|+.||||++...... ....++..|+.+ +..++|||||++++++.+.+..|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC--HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc--HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 446788889999999999999995 57899999999654322 233456666655 78889999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 127 lv~ 129 (340)
T 3an0_A 127 ICM 129 (340)
T ss_dssp EEE
T ss_pred EEH
Confidence 885
No 321
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.73 E-value=1.8e-08 Score=94.37 Aligned_cols=84 Identities=20% Similarity=0.455 Sum_probs=70.2
Q ss_pred HHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC--CCCccceeEEEEeC
Q 036034 398 DIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR--HRNIVKLYGFCLHR 475 (482)
Q Consensus 398 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~ 475 (482)
.+....++|...+.||+|+||.||+++..+++.||||.+..... .....+.|.+|++++.+++ ||||+++++++.+.
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 33445577999999999999999999987899999999965332 2344578999999999997 59999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..|+||
T Consensus 101 ~~~~lv~ 107 (313)
T 3cek_A 101 QYIYMVM 107 (313)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9999885
No 322
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=98.73 E-value=1e-08 Score=97.41 Aligned_cols=80 Identities=26% Similarity=0.477 Sum_probs=64.5
Q ss_pred HHhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCL 473 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 473 (482)
...++|...+.||+|+||.||+|+. ..++.||+|.+.... .....+.+.+|++++.++ +||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3557899999999999999999984 235689999996432 222346799999999999 8999999999999
Q ss_pred eCCEEEEEC
Q 036034 474 HRKCMFLIY 482 (482)
Q Consensus 474 ~~~~~~lv~ 482 (482)
+.+..++||
T Consensus 120 ~~~~~~lv~ 128 (344)
T 1rjb_A 120 LSGPIYLIF 128 (344)
T ss_dssp SSSSCEEEE
T ss_pred eCCccEEEE
Confidence 998888885
No 323
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.72 E-value=2.1e-08 Score=96.97 Aligned_cols=81 Identities=23% Similarity=0.425 Sum_probs=58.4
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRK-- 476 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~-- 476 (482)
...++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|+.++.++. |||||++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 3457899999999999999999984 569999999986432 23344567889999999997 999999999998654
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 85 ~~~lv~ 90 (388)
T 3oz6_A 85 DVYLVF 90 (388)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 678875
No 324
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.72 E-value=1.1e-09 Score=93.98 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=86.8
Q ss_pred CcccCCCCCCCEEeCcCC-ccccc----CCccccCCCCCCeeecccCcceec----cCccccCCCCCCEEEccCCccccc
Q 036034 22 PPTLGRLSKLENLHLSSN-SLVGN----IPSTLGHLTQLTTLAIASNHINVS----IPLEIGNLNFLQVLDLSGNEIRGS 92 (482)
Q Consensus 22 ~~~~~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~ 92 (482)
...+...++|++|+|++| .+.+. +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345666788888888888 77643 445567778889999998888643 334455567899999999988753
Q ss_pred ----CCccCcCCCCCCEEeC--cCCccccc----CCccccCCCCCCEEEcccccCc
Q 036034 93 ----IPSTFGHLKRLKSLDL--SQNKLVGP----IPSSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 93 ----~~~~l~~l~~L~~L~L--~~n~l~~~----~~~~l~~l~~L~~L~l~~n~i~ 138 (482)
+..++...++|++|+| ++|.++.. +...+...+.|++|++++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5667777888999999 78888754 3344556688999999988875
No 325
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.72 E-value=2.6e-08 Score=93.88 Aligned_cols=78 Identities=23% Similarity=0.368 Sum_probs=62.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKAR-LLSQIRHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .....++..|+. +++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 36788889999999999999996 4689999999965322 223345666665 7788899999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 99 v~ 100 (327)
T 3aln_A 99 CM 100 (327)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 326
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=98.71 E-value=9.7e-09 Score=97.48 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=62.3
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||.||+++.. +++.||+|+++.... .+.+|++++.++ +|||||++++++.+++..|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 4567999999999999999999954 688999999965332 234688888887 7999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 93 lv~ 95 (342)
T 2qr7_A 93 VVT 95 (342)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 327
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=98.71 E-value=1.9e-08 Score=94.33 Aligned_cols=77 Identities=25% Similarity=0.476 Sum_probs=61.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RKC 477 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 477 (482)
.++|...+.||+|+||.||+++. .+++.||+|++... .....+.+.+|++++.+++|||||++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 46799999999999999999995 57999999998542 22345789999999999999999999999973 235
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 105 ~~lv~ 109 (317)
T 2buj_A 105 AWLLL 109 (317)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66664
No 328
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.71 E-value=1.1e-08 Score=98.19 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=58.1
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK----- 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 476 (482)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|++++.+++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 35788899999999999999995 569999999986432 22334577899999999999999999999998753
Q ss_pred -EEEEEC
Q 036034 477 -CMFLIY 482 (482)
Q Consensus 477 -~~~lv~ 482 (482)
..|+||
T Consensus 103 ~~~~lv~ 109 (367)
T 1cm8_A 103 TDFYLVM 109 (367)
T ss_dssp CCCEEEE
T ss_pred ceEEEEE
Confidence 346764
No 329
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.71 E-value=1.6e-08 Score=97.21 Aligned_cols=75 Identities=25% Similarity=0.332 Sum_probs=62.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|++++.+++|||||++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL 116 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc
Confidence 35788899999999999999994 468999999996533 2233457889999999999999999999999877654
No 330
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=98.70 E-value=3.8e-08 Score=92.82 Aligned_cols=76 Identities=26% Similarity=0.431 Sum_probs=62.8
Q ss_pred hcccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RK 476 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~ 476 (482)
++|...+.||+|+||.||+|++ .+++.||||++.... ....+.|.+|++++.+++||||+++++++.. .+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 5788899999999999999984 357899999986532 2344679999999999999999999999874 45
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 100 ~~~lv~ 105 (327)
T 3lxl_A 100 SLRLVM 105 (327)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 677775
No 331
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.70 E-value=1.7e-08 Score=95.51 Aligned_cols=77 Identities=29% Similarity=0.419 Sum_probs=63.0
Q ss_pred hcccccceeCccCcEEEEEEEcCC-----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++|...+.||+|+||.||+|+... +..||+|.+.... .....+.|.+|++++.+++|||||++++++.+.+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 456778899999999999998532 2359999986432 223456799999999999999999999999998888
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 122 ~lv~ 125 (333)
T 1mqb_A 122 MIIT 125 (333)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8885
No 332
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=98.70 E-value=6.3e-09 Score=96.94 Aligned_cols=80 Identities=25% Similarity=0.428 Sum_probs=52.2
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEE
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 479 (482)
...++|...+.||+|+||.||+|+. .+++.||||++..... ....+++.+|++++.+++||||+++++++...+..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3457899999999999999999995 4689999999864322 223467899999999999999999999999999988
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 90 lv~ 92 (303)
T 2vwi_A 90 LVM 92 (303)
T ss_dssp EEE
T ss_pred EEe
Confidence 885
No 333
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=98.70 E-value=2.8e-08 Score=91.47 Aligned_cols=78 Identities=28% Similarity=0.413 Sum_probs=61.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
..++|...+.||+|+||.||+|+... +..||+|.+.... .....+.|.+|+.++.+++|||||++++++. .+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 34678889999999999999998532 4579999986432 2234567999999999999999999999984 455
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 90 ~~lv~ 94 (281)
T 1mp8_A 90 VWIIM 94 (281)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 66664
No 334
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=98.70 E-value=2.5e-08 Score=93.63 Aligned_cols=67 Identities=25% Similarity=0.368 Sum_probs=52.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCL 473 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 473 (482)
++|...+.||+|+||.||+|+.. +++.||+|++... +....+.+.+|++++++++|||||++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 78 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILG 78 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecc
Confidence 57888999999999999999965 5899999998643 2334578999999999999999999999873
No 335
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.69 E-value=1.2e-08 Score=96.50 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=63.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (482)
++|...+.||+|+||.||+|+. .+|+.||||.+...... +.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 5788899999999999999994 57899999998643221 3588999999999 899999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 84 ~ 84 (330)
T 2izr_A 84 L 84 (330)
T ss_dssp E
T ss_pred E
Confidence 6
No 336
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.69 E-value=1.8e-08 Score=96.48 Aligned_cols=76 Identities=21% Similarity=0.285 Sum_probs=51.7
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR 475 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 475 (482)
.......++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++.+..++|||||+++++|.+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 44566778999999999999999999995 46899999998543322 24567788888999999999999999764
Q ss_pred C
Q 036034 476 K 476 (482)
Q Consensus 476 ~ 476 (482)
+
T Consensus 92 ~ 92 (360)
T 3e3p_A 92 G 92 (360)
T ss_dssp C
T ss_pred c
Confidence 3
No 337
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.69 E-value=2.1e-08 Score=95.58 Aligned_cols=78 Identities=24% Similarity=0.465 Sum_probs=63.7
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR-----K 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 476 (482)
.++|...+.||+|+||.||+|+.. +|+.||||++.... .......+.+|++++.+++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 467889999999999999999954 68999999996432 223446788999999999999999999998764 5
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..|+||
T Consensus 88 ~~~lv~ 93 (353)
T 2b9h_A 88 EVYIIQ 93 (353)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 567764
No 338
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.68 E-value=2.8e-08 Score=96.74 Aligned_cols=74 Identities=27% Similarity=0.467 Sum_probs=54.5
Q ss_pred hcccc-cceeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCE
Q 036034 404 EDFHI-KYCIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH--RKC 477 (482)
Q Consensus 404 ~~~~~-~~~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~ 477 (482)
+.|.. .+.||+|+||.||+|+.. +++.||+|++..... .+.+.+|++++.+++|||||++++++.+ ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 34554 457999999999999954 578899999964322 2568899999999999999999999966 567
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 95 ~~lv~ 99 (405)
T 3rgf_A 95 VWLLF 99 (405)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77775
No 339
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.68 E-value=1.6e-08 Score=96.99 Aligned_cols=79 Identities=27% Similarity=0.401 Sum_probs=59.7
Q ss_pred hhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 036034 403 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR------ 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 475 (482)
.++|...+.||+|+||.||+|+ ..+|+.||||++.... ......+.+.+|++++.+++|||||++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3678899999999999999998 4568999999986432 2233457789999999999999999999998754
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
...|+||
T Consensus 107 ~~~~lv~ 113 (367)
T 2fst_X 107 NDVYLVT 113 (367)
T ss_dssp CCCEEEE
T ss_pred CeEEEEe
Confidence 4456653
No 340
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.68 E-value=7.9e-09 Score=99.62 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=59.2
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHH---HHHhcCCCCCcccee-------E
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKA---RLLSQIRHRNIVKLY-------G 470 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------g 470 (482)
..++|...+.||+|+||.||+|+. .+|+.||||++...........+.|.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 346788899999999999999995 56999999999754444445567899999 566677899999998 6
Q ss_pred EEEeC
Q 036034 471 FCLHR 475 (482)
Q Consensus 471 ~~~~~ 475 (482)
++.++
T Consensus 151 ~~~~~ 155 (377)
T 3byv_A 151 LVKDP 155 (377)
T ss_dssp EEECT
T ss_pred hhhcc
Confidence 66654
No 341
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.68 E-value=3.2e-08 Score=93.42 Aligned_cols=73 Identities=21% Similarity=0.403 Sum_probs=62.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEe--CCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLH--RKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~ 479 (482)
++|...+.||+|+||.||+|+. .+++.||+|+++.. ..+.+.+|++++.+++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 6788999999999999999984 57899999998632 2367899999999997 9999999999988 55667
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 110 lv~ 112 (330)
T 3nsz_A 110 LVF 112 (330)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 342
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.68 E-value=2.4e-08 Score=92.94 Aligned_cols=72 Identities=24% Similarity=0.435 Sum_probs=58.2
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhc--CCCCCccceeEEEEeCC----E
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQ--IRHRNIVKLYGFCLHRK----C 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~ 477 (482)
++|...+.||+|+||.||+|+. .++.||||++... ....+.+|.+++.. ++||||+++++++.+.+ .
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 5788899999999999999987 4889999998532 22567788889887 79999999999998876 6
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 76 ~~lv~ 80 (303)
T 3gxj_A 76 LWLVS 80 (303)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77775
No 343
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=98.68 E-value=3.1e-08 Score=93.44 Aligned_cols=77 Identities=29% Similarity=0.578 Sum_probs=61.9
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCE--EEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKV--VALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~--vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
++|...+.||+|+||.||+|+.. ++.. +|+|++.... .....+.+.+|++++.++ +||||+++++++.+.+..|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 67888999999999999999953 4654 4899886432 222346789999999999 8999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 103 lv~ 105 (327)
T 1fvr_A 103 LAI 105 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 344
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.68 E-value=2.2e-08 Score=95.57 Aligned_cols=73 Identities=26% Similarity=0.328 Sum_probs=60.8
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|+.++.+++|||||++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS 97 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc
Confidence 5688889999999999999995 468999999996532 223345678999999999999999999999987653
No 345
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.68 E-value=2.7e-08 Score=93.85 Aligned_cols=75 Identities=21% Similarity=0.502 Sum_probs=55.3
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCE----EEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKV----VALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++|...+.||+|+||.||+|+.. +++. ||+|.+.... .....+.|.+|+.++++++|||||+++++|.+.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence 56888999999999999999953 4443 5888875322 223457899999999999999999999999987654
Q ss_pred EE
Q 036034 479 FL 480 (482)
Q Consensus 479 ~l 480 (482)
++
T Consensus 93 ~v 94 (327)
T 3poz_A 93 LI 94 (327)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 346
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.67 E-value=2.5e-08 Score=95.63 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=64.0
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK---- 476 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 476 (482)
..++|...+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|++++.+++|||||++++++....
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 345799999999999999999984 468899999986432 2234477999999999999999999999997653
Q ss_pred -EEEEEC
Q 036034 477 -CMFLIY 482 (482)
Q Consensus 477 -~~~lv~ 482 (482)
..|+||
T Consensus 103 ~~~~iv~ 109 (364)
T 3qyz_A 103 KDVYIVQ 109 (364)
T ss_dssp CCEEEEE
T ss_pred ceEEEEE
Confidence 566664
No 347
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=98.67 E-value=1.7e-08 Score=94.72 Aligned_cols=86 Identities=21% Similarity=0.349 Sum_probs=67.3
Q ss_pred cHHHHHHHhhcccccceeCccCcEEEEEEEc------CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccc
Q 036034 395 TFQDIIEATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVK 467 (482)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~ 467 (482)
...++....++|...+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|++++.++ +||||++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 3444555668899999999999999999983 346789999996532 223446799999999999 7999999
Q ss_pred eeEEEEeCC-EEEEEC
Q 036034 468 LYGFCLHRK-CMFLIY 482 (482)
Q Consensus 468 l~g~~~~~~-~~~lv~ 482 (482)
++++|.+.+ ..++||
T Consensus 96 ~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 96 LLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEECCTTSCCEEEE
T ss_pred EEEEEecCCCceEEEE
Confidence 999998754 466664
No 348
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.67 E-value=2.6e-08 Score=91.55 Aligned_cols=74 Identities=26% Similarity=0.540 Sum_probs=60.9
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-EEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK-CMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv 481 (482)
.++|...+.||+|+||.||+|+. .|+.||||.++... ..+.|.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 46789999999999999999987 48899999986432 3367999999999999999999999986653 56776
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 94 ~ 94 (278)
T 1byg_A 94 T 94 (278)
T ss_dssp E
T ss_pred E
Confidence 4
No 349
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.67 E-value=4.4e-08 Score=90.70 Aligned_cols=78 Identities=21% Similarity=0.401 Sum_probs=59.9
Q ss_pred hhcccccc-eeCccCcEEEEEEEc---CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKY-CIGTGGYGSVYRARL---PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~-~ig~g~~g~v~~~~~---~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|.... .||+|+||.||+|.+ ..++.||||+++... .+....+.|.+|++++.+++||||+++++++ +.+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 45677777 899999999999963 346789999996543 2223457899999999999999999999999 55666
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 93 ~lv~ 96 (291)
T 1xbb_A 93 MLVM 96 (291)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 350
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=98.67 E-value=3.8e-08 Score=92.77 Aligned_cols=77 Identities=34% Similarity=0.546 Sum_probs=61.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-----CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK- 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~- 476 (482)
.++|...+.||+|+||.||++++ .+++.||+|++... .....+.|.+|++++.+++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 35688899999999999999984 35889999998653 2234578999999999999999999999987654
Q ss_pred -EEEEEC
Q 036034 477 -CMFLIY 482 (482)
Q Consensus 477 -~~~lv~ 482 (482)
..++||
T Consensus 117 ~~~~lv~ 123 (326)
T 2w1i_A 117 RNLKLIM 123 (326)
T ss_dssp -CCEEEE
T ss_pred CceEEEE
Confidence 566664
No 351
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.67 E-value=2.1e-09 Score=92.32 Aligned_cols=112 Identities=15% Similarity=0.257 Sum_probs=79.7
Q ss_pred cCCccccCCCCCCeeecccC-cceec----cCccccCCCCCCEEEccCCccccc----CCccCcCCCCCCEEeCcCCccc
Q 036034 44 NIPSTLGHLTQLTTLAIASN-HINVS----IPLEIGNLNFLQVLDLSGNEIRGS----IPSTFGHLKRLKSLDLSQNKLV 114 (482)
Q Consensus 44 ~~~~~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~ 114 (482)
.+...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455677788888888888 77642 344556677888888888887643 3455556678888888888887
Q ss_pred cc----CCccccCCCCCCEEEc--ccccCccc-----------ccCcCEEEcccCeec
Q 036034 115 GP----IPSSLGHLTQLTTLNM--RSNLINAS-----------LVNLTSLSLHYNNLT 155 (482)
Q Consensus 115 ~~----~~~~l~~l~~L~~L~l--~~n~i~~~-----------~~~L~~L~l~~n~~~ 155 (482)
+. +...+...+.|++|++ ++|.+... .++|+.|++++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 54 3455667778888888 77877632 467888888888775
No 352
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=98.67 E-value=1.3e-08 Score=95.08 Aligned_cols=71 Identities=34% Similarity=0.650 Sum_probs=58.9
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
++|...+.||+|+||.||+|+.. ++.||+|++... ...+.|.+|++++++++|||||+++|++.+. .++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEE
Confidence 57888999999999999999974 788999998532 2347899999999999999999999988643 45553
No 353
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.67 E-value=3.4e-08 Score=91.68 Aligned_cols=76 Identities=25% Similarity=0.431 Sum_probs=59.1
Q ss_pred cccccceeCccCcEEEEEEEcC-CC---CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE-E
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP-SG---KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM-F 479 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~-~~---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~ 479 (482)
.|...+.||+|+||.||+|+.. ++ ..+|+|.+.... .....+.|.+|++++++++|||||++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 3555688999999999999842 23 379999986432 334457899999999999999999999999876654 5
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 100 ~v~ 102 (298)
T 3pls_A 100 VLL 102 (298)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 354
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=98.67 E-value=2.5e-08 Score=102.21 Aligned_cols=69 Identities=28% Similarity=0.466 Sum_probs=56.8
Q ss_pred eeCccCcEEEEEEEcC---CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 411 CIGTGGYGSVYRARLP---SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 411 ~ig~g~~g~v~~~~~~---~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.||+|+||.||+|.+. ++..||||+++... .....++|.+|++++.+++|||||+++|+|.+ +..|+||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 7999999999999853 45679999997542 22345789999999999999999999999976 5577775
No 355
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.66 E-value=4.9e-08 Score=92.04 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=70.0
Q ss_pred ccHHHHHHHhhccccc-ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeE
Q 036034 394 ITFQDIIEATEDFHIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYG 470 (482)
Q Consensus 394 ~~~~~~~~~~~~~~~~-~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g 470 (482)
+.++......+.|... +.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+.++.+++ ||||+++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3344455566677776 88999999999999954 6899999999653322 234578999999999995 799999999
Q ss_pred EEEeCCEEEEEC
Q 036034 471 FCLHRKCMFLIY 482 (482)
Q Consensus 471 ~~~~~~~~~lv~ 482 (482)
++.+.+..++||
T Consensus 97 ~~~~~~~~~lv~ 108 (327)
T 3lm5_A 97 VYENTSEIILIL 108 (327)
T ss_dssp EEECSSEEEEEE
T ss_pred EEEeCCeEEEEE
Confidence 999999999885
No 356
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.66 E-value=1.7e-08 Score=93.48 Aligned_cols=78 Identities=28% Similarity=0.523 Sum_probs=54.3
Q ss_pred hhcccccceeCccCcEEEEEEEcC--CCC--EEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP--SGK--VVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
.++|...+.||+|+||.||+|++. +++ .||+|+++..........+.|.+|++++.+++||||+++++++.+++ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999852 333 68999987544334445678999999999999999999999998765 4
Q ss_pred EEE
Q 036034 479 FLI 481 (482)
Q Consensus 479 ~lv 481 (482)
++|
T Consensus 96 ~~v 98 (291)
T 1u46_A 96 KMV 98 (291)
T ss_dssp EEE
T ss_pred eee
Confidence 454
No 357
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.66 E-value=5.6e-08 Score=91.14 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=57.5
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+.++..++..++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 467888999999999999999964 6899999999654322 12234455566678889999999999999999999988
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 103 ~ 103 (318)
T 2dyl_A 103 M 103 (318)
T ss_dssp E
T ss_pred E
Confidence 5
No 358
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.65 E-value=1.6e-08 Score=96.67 Aligned_cols=80 Identities=28% Similarity=0.404 Sum_probs=65.7
Q ss_pred hhcccccceeCccCcEEEEEEEc----CCCCEEEEEEecccccc-chhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHCSETE-ELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRK 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 476 (482)
.++|...+.||+|+||.||+|+. .+++.||||+++..... .....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999986 36899999998643221 122335677899999999 6999999999999999
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 133 ~~~lv~ 138 (355)
T 1vzo_A 133 KLHLIL 138 (355)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999986
No 359
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.64 E-value=5.1e-08 Score=90.15 Aligned_cols=76 Identities=25% Similarity=0.496 Sum_probs=60.3
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|+.. ..+|+|+++.... .....+.|.+|++++.+++||||+++++++. .+..++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 467888999999999999999864 3599999965432 3345578999999999999999999999764 44455553
No 360
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.64 E-value=3.1e-08 Score=93.84 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=56.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEecccccc-----chhhHHHHHHHHHHHhcCC---------CCCccce
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETE-----ELTSLESFRNKARLLSQIR---------HRNIVKL 468 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~---------H~niv~l 468 (482)
.++|...+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999997 6899999999754321 2234577899999998885 8888888
Q ss_pred eEEEE
Q 036034 469 YGFCL 473 (482)
Q Consensus 469 ~g~~~ 473 (482)
.+.+.
T Consensus 98 ~~~~~ 102 (336)
T 2vuw_A 98 NSVHC 102 (336)
T ss_dssp EEEEE
T ss_pred cceeE
Confidence 88754
No 361
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.64 E-value=3e-08 Score=92.83 Aligned_cols=75 Identities=23% Similarity=0.451 Sum_probs=56.9
Q ss_pred HHhhcccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
...++|...+.||+|+||.||+|+.. .++.||+|+++.... .....+.|.+|++++.+++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 34577888999999999999999853 345899999865432 2334577999999999999999999999998765
No 362
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=98.64 E-value=3.7e-08 Score=90.76 Aligned_cols=66 Identities=29% Similarity=0.496 Sum_probs=56.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
...+|...+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++.+++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~ 75 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDG 75 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEec
Confidence 3467899999999999999999964 79999999986432 356789999999999999999999865
No 363
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.63 E-value=2.3e-08 Score=97.75 Aligned_cols=64 Identities=31% Similarity=0.515 Sum_probs=53.6
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
..|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++.+++|||||+++++|..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~ 118 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYS 118 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEec
Confidence 46888899999999999999964 69999999986432 123479999999999999999999865
No 364
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.62 E-value=2.9e-08 Score=103.34 Aligned_cols=77 Identities=26% Similarity=0.478 Sum_probs=64.4
Q ss_pred hcccccceeCccCcEEEEEEEcC--CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE----
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP--SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC---- 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~--~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 477 (482)
++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.|.+|++++.+++|||||+++++|.+.+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 67999999999999999999954 58899999986432 23345678999999999999999999999988655
Q ss_pred -EEEEC
Q 036034 478 -MFLIY 482 (482)
Q Consensus 478 -~~lv~ 482 (482)
.||||
T Consensus 158 ~~~lv~ 163 (681)
T 2pzi_A 158 VGYIVM 163 (681)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 67875
No 365
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.62 E-value=3.5e-08 Score=92.21 Aligned_cols=81 Identities=32% Similarity=0.479 Sum_probs=59.5
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEecccccc--chhhHHHHHHHHHHHhcCC---CCCccceeEEEEeC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETE--ELTSLESFRNKARLLSQIR---HRNIVKLYGFCLHR 475 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~ 475 (482)
..++|...+.||+|+||+||+|+. .+++.||+|++...... .......+.+|++++.+++ |||||+++++|.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999994 56899999998643211 1112246777888777664 99999999999886
Q ss_pred C-----EEEEEC
Q 036034 476 K-----CMFLIY 482 (482)
Q Consensus 476 ~-----~~~lv~ 482 (482)
+ ..++||
T Consensus 87 ~~~~~~~~~lv~ 98 (308)
T 3g33_A 87 RTDREIKVTLVF 98 (308)
T ss_dssp CSSSEEEEEEEE
T ss_pred CCCCceeEEEEe
Confidence 5 456664
No 366
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=98.62 E-value=5.5e-08 Score=100.00 Aligned_cols=71 Identities=23% Similarity=0.415 Sum_probs=57.0
Q ss_pred ceeCccCcEEEEEEEc---CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARL---PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~---~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
+.||+|+||.||+|.+ ..++.||||+++... .+....++|.+|++++.+++|||||+++++|.+ +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEE
Confidence 4799999999999964 246789999996532 233445789999999999999999999999965 4466764
No 367
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.61 E-value=6.9e-08 Score=89.75 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=57.4
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhc--CCCCCccceeEEEEeC----C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQ--IRHRNIVKLYGFCLHR----K 476 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~----~ 476 (482)
.++|...+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+. +
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46788999999999999999998 6889999998542 22456667776665 7999999999997653 3
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 80 ~~~lv~ 85 (301)
T 3q4u_A 80 QLWLIT 85 (301)
T ss_dssp EEEEEE
T ss_pred eeEEeh
Confidence 466664
No 368
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.59 E-value=1.5e-07 Score=89.31 Aligned_cols=76 Identities=22% Similarity=0.401 Sum_probs=63.2
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhc--CCCCCccceeEEEEeCC-
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQ--IRHRNIVKLYGFCLHRK- 476 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~- 476 (482)
....++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.+.+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 44567899999999999999999998 5899999998532 23567888988887 79999999999998876
Q ss_pred ---EEEEEC
Q 036034 477 ---CMFLIY 482 (482)
Q Consensus 477 ---~~~lv~ 482 (482)
..++||
T Consensus 111 ~~~~~~lv~ 119 (342)
T 1b6c_B 111 TWTQLWLVS 119 (342)
T ss_dssp SCCCEEEEE
T ss_pred ccceeEEEE
Confidence 677774
No 369
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.59 E-value=5.8e-08 Score=90.17 Aligned_cols=77 Identities=23% Similarity=0.468 Sum_probs=59.8
Q ss_pred hcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH-RKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~ 478 (482)
..|...+.||+|+||.||+|+..+ +..+|+|.+.... .....+.|.+|++++++++|||||+++++|.+ ++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 457788999999999999998532 2358999986432 33445789999999999999999999999765 4456
Q ss_pred EEEC
Q 036034 479 FLIY 482 (482)
Q Consensus 479 ~lv~ 482 (482)
++||
T Consensus 103 ~~v~ 106 (298)
T 3f66_A 103 LVVL 106 (298)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 370
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.59 E-value=8.6e-08 Score=89.47 Aligned_cols=76 Identities=25% Similarity=0.511 Sum_probs=60.1
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEEC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.++|...+.||+|+||.||+|+.. ..+|+|.++.... .....+.|.+|++++.+++|||||++++++.+ +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 367888899999999999999864 4689998865332 33445789999999999999999999998754 4455553
No 371
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.59 E-value=2e-08 Score=94.02 Aligned_cols=83 Identities=16% Similarity=0.317 Sum_probs=56.5
Q ss_pred HHHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccch---hhHHHHHHHHHHHhcC----CCCCccceeEE
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEEL---TSLESFRNKARLLSQI----RHRNIVKLYGF 471 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l----~H~niv~l~g~ 471 (482)
....++|...+.||+|+||.||+|+. .+++.||+|++........ .....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999985 4689999999965432211 1223466788888888 89999999999
Q ss_pred EEeCCEEEEEC
Q 036034 472 CLHRKCMFLIY 482 (482)
Q Consensus 472 ~~~~~~~~lv~ 482 (482)
+.+.+..++||
T Consensus 107 ~~~~~~~~~v~ 117 (312)
T 2iwi_A 107 FETQEGFMLVL 117 (312)
T ss_dssp C-----CEEEE
T ss_pred EecCCeEEEEE
Confidence 99888877774
No 372
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=98.58 E-value=2.9e-08 Score=95.30 Aligned_cols=76 Identities=25% Similarity=0.518 Sum_probs=59.5
Q ss_pred cccccceeCccCcEEEEEEEcC--CC--CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-CEEE
Q 036034 405 DFHIKYCIGTGGYGSVYRARLP--SG--KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHR-KCMF 479 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~--~~--~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~ 479 (482)
.|...+.||+|+||.||+|+.. ++ ..||+|.++.. .+....+.|.+|+.++++++|||||+++++|.+. +..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4667789999999999999853 22 36899998642 2334557899999999999999999999998654 4666
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 168 lv~ 170 (373)
T 3c1x_A 168 VVL 170 (373)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 373
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.58 E-value=9.3e-08 Score=90.12 Aligned_cols=75 Identities=23% Similarity=0.547 Sum_probs=59.4
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCE----EEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKV----VALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++|...+.||+|+||.||+|+. .+++. ||+|.+.... .....+.|.+|+.++.+++|||||+++++|.+.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCce
Confidence 5788899999999999999995 34543 5777775322 223457899999999999999999999999987755
Q ss_pred EE
Q 036034 479 FL 480 (482)
Q Consensus 479 ~l 480 (482)
++
T Consensus 93 ~v 94 (327)
T 3lzb_A 93 LI 94 (327)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 374
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.58 E-value=5.7e-08 Score=89.39 Aligned_cols=78 Identities=28% Similarity=0.425 Sum_probs=61.2
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
..++|...+.||+|+||.||+|+... +..||+|.+.... .....+.|.+|++++.+++||||+++++++.++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 86 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP- 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS-
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-
Confidence 34678999999999999999998532 3469999986542 2234578999999999999999999999986544
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 87 ~~~v~ 91 (281)
T 3cc6_A 87 TWIIM 91 (281)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 45553
No 375
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.57 E-value=4.5e-08 Score=92.20 Aligned_cols=81 Identities=30% Similarity=0.545 Sum_probs=60.6
Q ss_pred HHhhcccccceeCccCcEEEEEEEc--CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC---CCCCccceeEEEE--
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI---RHRNIVKLYGFCL-- 473 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~-- 473 (482)
.+.++|...+.||+|+||.||+|+. .+|+.||+|++....... .....+.+|++++..+ +||||++++++|.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 3557899999999999999999996 468899999986432211 1123566777777665 8999999999997
Q ss_pred ---eCCEEEEEC
Q 036034 474 ---HRKCMFLIY 482 (482)
Q Consensus 474 ---~~~~~~lv~ 482 (482)
.....++||
T Consensus 87 ~~~~~~~~~lv~ 98 (326)
T 1blx_A 87 RTDRETKLTLVF 98 (326)
T ss_dssp ECSSEEEEEEEE
T ss_pred ccCCCceEEEEE
Confidence 445666664
No 376
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.57 E-value=7e-08 Score=91.26 Aligned_cols=68 Identities=24% Similarity=0.388 Sum_probs=57.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~ 473 (482)
..+|...+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.++.++. |||||++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~ 96 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence 35788899999999999999995 46899999998543 2234467899999999996 999999999995
No 377
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.56 E-value=8.9e-08 Score=92.76 Aligned_cols=72 Identities=24% Similarity=0.398 Sum_probs=57.3
Q ss_pred hcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE------
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC------ 477 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------ 477 (482)
.+|...+.||+|+||.||+|+...+..+|+|++..... ...+|+++++.++|||||+++++|...+.
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 46888999999999999999976666799998854321 12369999999999999999999966432
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.++||
T Consensus 113 ~~lv~ 117 (394)
T 4e7w_A 113 LNLVL 117 (394)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66664
No 378
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=98.56 E-value=6.8e-08 Score=92.60 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=62.6
Q ss_pred HhhcccccceeCccCcEEEEEEE------cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC---CCCccceeEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR------LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR---HRNIVKLYGFC 472 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~------~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~ 472 (482)
..++|...+.||+|+||.||+|+ ...++.||+|++... ..++|.+|++++.+++ |+||+++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 45779999999999999999994 446889999998643 2357888888888887 99999999999
Q ss_pred EeCCEEEEEC
Q 036034 473 LHRKCMFLIY 482 (482)
Q Consensus 473 ~~~~~~~lv~ 482 (482)
...+..|+||
T Consensus 137 ~~~~~~~lv~ 146 (365)
T 3e7e_A 137 LFQNGSVLVG 146 (365)
T ss_dssp ECSSCEEEEE
T ss_pred ecCCCcEEEE
Confidence 9999999986
No 379
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.56 E-value=5e-08 Score=101.03 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=67.7
Q ss_pred HhhcccccceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 479 (482)
..++|...+.||+|+||+||+|+.. +++.||||+++..........+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999954 6889999999754333334456788999999988 7999999999999999999
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
|||
T Consensus 419 lV~ 421 (674)
T 3pfq_A 419 FVM 421 (674)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 380
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.56 E-value=1.9e-07 Score=88.29 Aligned_cols=76 Identities=24% Similarity=0.423 Sum_probs=60.4
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC--CCCCccceeEEEEeC--
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI--RHRNIVKLYGFCLHR-- 475 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l--~H~niv~l~g~~~~~-- 475 (482)
....++|...+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +|||||++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 334578999999999999999999975 8999999985321 24455666666655 899999999999987
Q ss_pred --CEEEEEC
Q 036034 476 --KCMFLIY 482 (482)
Q Consensus 476 --~~~~lv~ 482 (482)
+..++||
T Consensus 106 ~~~~~~lv~ 114 (337)
T 3mdy_A 106 SWTQLYLIT 114 (337)
T ss_dssp GGCEEEEEE
T ss_pred CCCceEEEE
Confidence 6788875
No 381
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.55 E-value=9.6e-08 Score=93.59 Aligned_cols=76 Identities=18% Similarity=0.317 Sum_probs=62.4
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC------CCCCccceeEEEEeC
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI------RHRNIVKLYGFCLHR 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~ 475 (482)
..+|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++..+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 35688999999999999999985 458899999996432 2335677888888766 677999999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 172 ~~~~lv~ 178 (429)
T 3kvw_A 172 NHICMTF 178 (429)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 9999885
No 382
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.55 E-value=7.3e-08 Score=94.61 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=59.4
Q ss_pred cccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+++..|+||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 34556889999999997666567999999998542 125678999999876 8999999999999999999985
No 383
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.53 E-value=9.7e-08 Score=93.54 Aligned_cols=74 Identities=18% Similarity=0.265 Sum_probs=60.2
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 481 (482)
..+|...+.||+|+||+||.....+++.||||++..... ..+.+|++++.++ +|||||++++++.+.+..|||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 346888899999999996544445789999999864322 2355799999999 799999999999999999998
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 97 ~ 97 (432)
T 3p23_A 97 I 97 (432)
T ss_dssp E
T ss_pred E
Confidence 5
No 384
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.52 E-value=1.2e-07 Score=87.86 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=63.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++..... .+.+.+|++++.++ +|+|++++++++.+.+..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 35688999999999999999994 5789999999864322 14578899999999 79999999999999999998
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 84 v~ 85 (298)
T 1csn_A 84 VI 85 (298)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 385
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.52 E-value=5.3e-08 Score=91.71 Aligned_cols=75 Identities=20% Similarity=0.416 Sum_probs=56.7
Q ss_pred hcccccceeCccCcEEEEEEEcC-CCCE----EEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP-SGKV----VALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCM 478 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 478 (482)
++|...+.||+|+||.||+|+.. +++. ||+|.+..... ....+.+.+|+.++++++|||||+++++|.+.. .
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-L 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSS-E
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCc-c
Confidence 56888899999999999999953 4443 78887753321 122356788999999999999999999987544 5
Q ss_pred EEE
Q 036034 479 FLI 481 (482)
Q Consensus 479 ~lv 481 (482)
++|
T Consensus 90 ~~v 92 (325)
T 3kex_A 90 QLV 92 (325)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 386
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.51 E-value=5.7e-08 Score=94.17 Aligned_cols=76 Identities=20% Similarity=0.329 Sum_probs=61.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC--------CCCccceeEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR--------HRNIVKLYGFCL 473 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~ 473 (482)
.++|...+.||+|+||+||+|+. .+++.||||++... ....+.+.+|++++.+++ |||||++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 36799999999999999999984 56889999998643 223467889999999886 788999999987
Q ss_pred ----eCCEEEEEC
Q 036034 474 ----HRKCMFLIY 482 (482)
Q Consensus 474 ----~~~~~~lv~ 482 (482)
+....++||
T Consensus 112 ~~~~~~~~~~lv~ 124 (397)
T 1wak_A 112 ISGVNGTHICMVF 124 (397)
T ss_dssp EEETTEEEEEEEE
T ss_pred ecCCCCceEEEEE
Confidence 445677775
No 387
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.49 E-value=2.6e-07 Score=85.78 Aligned_cols=71 Identities=23% Similarity=0.385 Sum_probs=57.3
Q ss_pred hccccc-ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHH-hcCCCCCccceeEEEEe----CC
Q 036034 404 EDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLL-SQIRHRNIVKLYGFCLH----RK 476 (482)
Q Consensus 404 ~~~~~~-~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~----~~ 476 (482)
++|... +.||+|+||.||+|+. .+++.||+|+++.. ..+.+|++++ ...+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 456665 7899999999999995 56899999998531 4567888888 56689999999999987 56
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 89 ~~~lv~ 94 (299)
T 3m2w_A 89 CLLIVM 94 (299)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 677775
No 388
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.48 E-value=5.1e-08 Score=91.62 Aligned_cols=82 Identities=18% Similarity=0.358 Sum_probs=65.2
Q ss_pred HHhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccch---hhHHHHHHHHHHHhcCC--CCCccceeEEEEe
Q 036034 401 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEEL---TSLESFRNKARLLSQIR--HRNIVKLYGFCLH 474 (482)
Q Consensus 401 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~ 474 (482)
...++|...+.||+|+||.||+|+. .+++.||||++........ ...+.+.+|++++.+++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456799999999999999999984 5689999999965432211 12245778999999996 5999999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
++..++||
T Consensus 120 ~~~~~lv~ 127 (320)
T 3a99_A 120 PDSFVLIL 127 (320)
T ss_dssp SSEEEEEE
T ss_pred CCcEEEEE
Confidence 99888875
No 389
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.48 E-value=1.3e-07 Score=89.79 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=56.5
Q ss_pred hcccccceeCccCcEEEEEEEcC----CCCEEEEEEeccccccchh--------hHHHHHHHHHHHhcCCCCCccceeEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHCSETEELT--------SLESFRNKARLLSQIRHRNIVKLYGF 471 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~l~~~~~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~g~ 471 (482)
++|...+.||+|+||.||+|+.. .+..+|+|+.......... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57889999999999999999964 5778999998654221100 12347789999999999999999999
Q ss_pred EEe----CCEEEEEC
Q 036034 472 CLH----RKCMFLIY 482 (482)
Q Consensus 472 ~~~----~~~~~lv~ 482 (482)
+.+ .+..|+||
T Consensus 117 ~~~~~~~~~~~~lv~ 131 (345)
T 2v62_A 117 GLTEFKGRSYRFMVM 131 (345)
T ss_dssp EEEESSSCEEEEEEE
T ss_pred cccccCCCcEEEEEE
Confidence 988 67788875
No 390
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.48 E-value=2.8e-07 Score=89.33 Aligned_cols=71 Identities=23% Similarity=0.370 Sum_probs=56.1
Q ss_pred hccccc-ceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHh-cCCCCCccceeEEEEe----CC
Q 036034 404 EDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLS-QIRHRNIVKLYGFCLH----RK 476 (482)
Q Consensus 404 ~~~~~~-~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~----~~ 476 (482)
++|... +.||+|+||+||+++. .+|+.||||+++.. ..+.+|++++. ..+|||||+++++|.. .+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 456555 6899999999999995 46899999998531 45678888874 4589999999999876 56
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
+.||||
T Consensus 133 ~~~lv~ 138 (400)
T 1nxk_A 133 CLLIVM 138 (400)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 678775
No 391
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.47 E-value=1.5e-07 Score=97.08 Aligned_cols=78 Identities=28% Similarity=0.416 Sum_probs=62.0
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC----CCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKC 477 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 477 (482)
..++|...+.||+|+||.||+|+... +..||+|.++... .....+.|.+|+.++++++|||||+++|++. .+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 45678889999999999999998632 4578999986432 2234478999999999999999999999985 455
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 465 ~~lv~ 469 (656)
T 2j0j_A 465 VWIIM 469 (656)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 67765
No 392
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.47 E-value=4.5e-08 Score=91.86 Aligned_cols=83 Identities=27% Similarity=0.449 Sum_probs=66.3
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLHRK 476 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 476 (482)
++.....++|...+.||+|+||.||+|+... .+|+|.++..... ....+.|.+|+.++.+++||||+++++++.+.+
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 3334455788999999999999999998743 4999998654322 223356788999999999999999999999999
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 103 ~~~iv~ 108 (319)
T 2y4i_B 103 HLAIIT 108 (319)
T ss_dssp CEEEEC
T ss_pred ceEEEe
Confidence 888886
No 393
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.43 E-value=3e-07 Score=87.98 Aligned_cols=81 Identities=22% Similarity=0.322 Sum_probs=58.6
Q ss_pred HhhcccccceeCccCcEEEEEEEcCC------CCEEEEEEeccccccchh--------hHHHHHHHHHHHhcCCCCCccc
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHCSETEELT--------SLESFRNKARLLSQIRHRNIVK 467 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~l~~~~~~~~~--------~~~~~~~e~~~l~~l~H~niv~ 467 (482)
..++|...+.||+|+||.||+|+... ++.||||++......... ....+.+|+..+..++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998654 478999998654321111 0123456677788899999999
Q ss_pred eeEEEEeC----CEEEEEC
Q 036034 468 LYGFCLHR----KCMFLIY 482 (482)
Q Consensus 468 l~g~~~~~----~~~~lv~ 482 (482)
+++++... ...||||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~ 131 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIM 131 (364)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred EEeeeeeccCCcceEEEEE
Confidence 99999775 4467775
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=1.5e-08 Score=91.34 Aligned_cols=64 Identities=25% Similarity=0.452 Sum_probs=30.9
Q ss_pred CCCCCCeeecccCccee--ccCccccCCCCCCEEEccCCcccccCCccCcCCC--CCCEEeCcCCccccc
Q 036034 51 HLTQLTTLAIASNHINV--SIPLEIGNLNFLQVLDLSGNEIRGSIPSTFGHLK--RLKSLDLSQNKLVGP 116 (482)
Q Consensus 51 ~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~--~L~~L~L~~n~l~~~ 116 (482)
++++|+.|+|++|++++ .+|..+..+++|++|+|++|.+++. ..+..+. +|++|+|++|.+.+.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccc
Confidence 34555555555555554 2233344555555555555555432 1122222 555555555555543
No 395
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.42 E-value=9.7e-08 Score=91.03 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=58.0
Q ss_pred hcccccceeCccCcEEEEEEEcC---------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccc-------
Q 036034 404 EDFHIKYCIGTGGYGSVYRARLP---------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVK------- 467 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~~---------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~------- 467 (482)
++|...+.||+|+||.||+|+.. +++.||+|.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 67899999999999999999965 3789999998642 35789999999999999987
Q ss_pred --------eeEEEEe-CCEEEEEC
Q 036034 468 --------LYGFCLH-RKCMFLIY 482 (482)
Q Consensus 468 --------l~g~~~~-~~~~~lv~ 482 (482)
+++++.. .+..|+||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~ 137 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVL 137 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEE
T ss_pred CCccCccchhhccccCCcEEEEEe
Confidence 6788877 67788875
No 396
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.42 E-value=3.8e-07 Score=87.59 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=44.2
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHH---HHHhcCCCCCcccee
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKA---RLLSQIRHRNIVKLY 469 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~---~~l~~l~H~niv~l~ 469 (482)
...|...+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+ +++.+ +|||||+++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~ 130 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDR 130 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhc
Confidence 45688899999999999999995 47899999999765543444556788885 55556 799987754
No 397
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.40 E-value=2.2e-07 Score=87.81 Aligned_cols=75 Identities=19% Similarity=0.398 Sum_probs=62.6
Q ss_pred hcccccceeCccCcEEEEEEEc--CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCC------ccceeEEEEeC
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRN------IVKLYGFCLHR 475 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~--~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~ 475 (482)
++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++..++|++ ++++++++.+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 5788999999999999999985 368899999986432 23467889999998887664 99999999999
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 90 ~~~~lv~ 96 (339)
T 1z57_A 90 GHICIVF 96 (339)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 9999986
No 398
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.39 E-value=1.9e-07 Score=89.70 Aligned_cols=75 Identities=19% Similarity=0.356 Sum_probs=61.1
Q ss_pred hcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-----------CCCccceeEE
Q 036034 404 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-----------HRNIVKLYGF 471 (482)
Q Consensus 404 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~ 471 (482)
++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.+++ ||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 5788999999999999999994 568999999986432 23467889999999886 8999999999
Q ss_pred EEeCC----EEEEEC
Q 036034 472 CLHRK----CMFLIY 482 (482)
Q Consensus 472 ~~~~~----~~~lv~ 482 (482)
+...+ ..++||
T Consensus 95 ~~~~~~~~~~~~lv~ 109 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVF 109 (373)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred hhccCCCCceEEEEE
Confidence 98754 566664
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=1.6e-07 Score=84.55 Aligned_cols=80 Identities=24% Similarity=0.361 Sum_probs=63.7
Q ss_pred CCCCCCCEEeCcCCcccc--cCCccccCCCCCCeeecccCcceeccCccccCCC--CCCEEEccCCcccccCCc------
Q 036034 26 GRLSKLENLHLSSNSLVG--NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLN--FLQVLDLSGNEIRGSIPS------ 95 (482)
Q Consensus 26 ~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~L~~n~~~~~~~~------ 95 (482)
..+++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+..|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 457899999999999997 4567778899999999999999864 2344444 899999999999876652
Q ss_pred -cCcCCCCCCEEe
Q 036034 96 -TFGHLKRLKSLD 107 (482)
Q Consensus 96 -~l~~l~~L~~L~ 107 (482)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367789999886
No 400
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.35 E-value=6e-08 Score=81.02 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=70.7
Q ss_pred CCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCc-ceeccCccccCC----CCCCEEEccCCc-ccccCC
Q 036034 21 IPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNH-INVSIPLEIGNL----NFLQVLDLSGNE-IRGSIP 94 (482)
Q Consensus 21 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~L~~n~-~~~~~~ 94 (482)
+|.....-.+|+.||+++|.+++.--..+.++++|++|+|++|. ++...-..++.+ ++|++|+|++|. +++.--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34433333579999999999887766778899999999999985 765444556654 479999999984 876655
Q ss_pred ccCcCCCCCCEEeCcCCc
Q 036034 95 STFGHLKRLKSLDLSQNK 112 (482)
Q Consensus 95 ~~l~~l~~L~~L~L~~n~ 112 (482)
..++.+++|++|++++|.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 667889999999999985
No 401
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.34 E-value=6.8e-07 Score=82.72 Aligned_cols=75 Identities=13% Similarity=0.311 Sum_probs=60.5
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFC-LHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+. .+++.||+|++...... +.+.+|++++.+++|++++..+++| .+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46789999999999999999994 57899999998643322 4688999999999998877777666 55677777
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 83 v~ 84 (296)
T 3uzp_A 83 VM 84 (296)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 402
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.33 E-value=5.5e-08 Score=99.18 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=60.4
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe------C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH------R 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~ 475 (482)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.|.+|++++.+++|||||++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 46799999999999999999985 468999999986432 23345779999999999999999999998755 4
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
+..++||
T Consensus 91 ~~~~LVm 97 (676)
T 3qa8_A 91 DLPLLAM 97 (676)
T ss_dssp SSCCCEE
T ss_pred CeEEEEE
Confidence 5555553
No 403
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.32 E-value=5.5e-07 Score=86.82 Aligned_cols=77 Identities=26% Similarity=0.411 Sum_probs=63.2
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCC-----ccceeEEEEe
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRN-----IVKLYGFCLH 474 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~n-----iv~l~g~~~~ 474 (482)
..++|...+.||+|+||+||+|+. .+++.||||+++... ...+++.+|++++..++ |++ ||++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 457899999999999999999995 468899999996422 23466788999988885 554 9999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..++||
T Consensus 128 ~~~~~lv~ 135 (382)
T 2vx3_A 128 RNHLCLVF 135 (382)
T ss_dssp TTEEEEEE
T ss_pred CCceEEEE
Confidence 99999986
No 404
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.31 E-value=1.1e-07 Score=79.37 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=71.8
Q ss_pred CCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccCCc-ccccCCccCcCC----CCCCEEeCcCCc-ccccCC
Q 036034 45 IPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSGNE-IRGSIPSTFGHL----KRLKSLDLSQNK-LVGPIP 118 (482)
Q Consensus 45 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-~~~~~~~~l~~l----~~L~~L~L~~n~-l~~~~~ 118 (482)
+|.....-.+|++||++++.++...-..+.++++|++|+|++|. +++.--..++.+ ++|++|+|++|. +++..-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45443344579999999999887666778899999999999995 766544556654 479999999985 776666
Q ss_pred ccccCCCCCCEEEccccc
Q 036034 119 SSLGHLTQLTTLNMRSNL 136 (482)
Q Consensus 119 ~~l~~l~~L~~L~l~~n~ 136 (482)
..+.++++|++|+++++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 678889999999999885
No 405
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.30 E-value=8e-07 Score=83.95 Aligned_cols=73 Identities=25% Similarity=0.430 Sum_probs=54.5
Q ss_pred hhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHH--HhcCCCCCccceeEEEEe-----C
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARL--LSQIRHRNIVKLYGFCLH-----R 475 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~g~~~~-----~ 475 (482)
.++|...+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46788999999999999999987 68899999986422 2345555555 445899999999986654 2
Q ss_pred CEEEEEC
Q 036034 476 KCMFLIY 482 (482)
Q Consensus 476 ~~~~lv~ 482 (482)
...++||
T Consensus 85 ~~~~lv~ 91 (336)
T 3g2f_A 85 MEYLLVM 91 (336)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 2456664
No 406
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.28 E-value=1.6e-06 Score=81.99 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=53.3
Q ss_pred hhccccc-ceeCccCcEEEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CC
Q 036034 403 TEDFHIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH----RK 476 (482)
Q Consensus 403 ~~~~~~~-~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~ 476 (482)
.++|... +.||+|+||.||+|+.. +|+.||+|++.... +...+....+..++||||+++++++.. ++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 4577774 56999999999999954 69999999985421 111222344567799999999999976 44
Q ss_pred EEEEEC
Q 036034 477 CMFLIY 482 (482)
Q Consensus 477 ~~~lv~ 482 (482)
..++||
T Consensus 100 ~~~lv~ 105 (336)
T 3fhr_A 100 CLLIIM 105 (336)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 567764
No 407
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.26 E-value=7.9e-07 Score=82.26 Aligned_cols=76 Identities=13% Similarity=0.308 Sum_probs=57.2
Q ss_pred HhhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFC-LHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~ 479 (482)
..++|...+.||+|+||.||+|+. .+++.||||++...... +.+.+|++++.+++|++++..+++| .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 446799999999999999999994 57899999987543221 3578899999999988888777766 5567777
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 82 lv~ 84 (296)
T 4hgt_A 82 MVM 84 (296)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 408
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.25 E-value=7.5e-07 Score=84.76 Aligned_cols=76 Identities=22% Similarity=0.323 Sum_probs=62.6
Q ss_pred hhcccccceeCccCcEEEEEEEcC-CC-CEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCC------ccceeEEEEe
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARLP-SG-KVVALKKLHCSETEELTSLESFRNKARLLSQIRHRN------IVKLYGFCLH 474 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~~-~~-~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~ 474 (482)
.++|...+.||+|+||.||+|+.. ++ +.||+|+++... ...+.+.+|++++.+++|++ ++.+.+++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 367899999999999999999953 34 689999986422 23467889999999987776 9999999999
Q ss_pred CCEEEEEC
Q 036034 475 RKCMFLIY 482 (482)
Q Consensus 475 ~~~~~lv~ 482 (482)
.+..++||
T Consensus 94 ~~~~~lv~ 101 (355)
T 2eu9_A 94 HGHMCIAF 101 (355)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 99999885
No 409
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.24 E-value=2.7e-06 Score=85.65 Aligned_cols=75 Identities=16% Similarity=0.099 Sum_probs=50.6
Q ss_pred cccceeCccCcEEEEEEEcCCCCEEEEEEeccccccc-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCEEEEE
Q 036034 407 HIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEE-----LTSLESFRNKARLLSQIRHRNIVKLYGFCLHRKCMFLI 481 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 481 (482)
...+.||+|+||.||+|+. .++.+|+|+........ ....+.|.+|++++.+++|||||++..++.+.+..|||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999965 57889999864322211 11245689999999999999999777777788877887
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 418 m 418 (540)
T 3en9_A 418 M 418 (540)
T ss_dssp E
T ss_pred E
Confidence 5
No 410
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.21 E-value=1.9e-06 Score=85.41 Aligned_cols=75 Identities=16% Similarity=0.306 Sum_probs=59.8
Q ss_pred hhcccccceeCccCcEEEEEEEc-CCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCEEEE
Q 036034 403 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH-RNIVKLYGFCLHRKCMFL 480 (482)
Q Consensus 403 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~l 480 (482)
.++|...+.||+|+||.||+|+. .+++.||||++...... +++.+|++++..++| ++++.+..++.+.+..+|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 36789999999999999999994 56999999987643322 357889999999986 556666677777888888
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 81 vm 82 (483)
T 3sv0_A 81 VM 82 (483)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 411
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.13 E-value=2.4e-06 Score=78.36 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=57.5
Q ss_pred HHHHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccch---------------hhHHHHHHHHHHHhcCC
Q 036034 397 QDIIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEEL---------------TSLESFRNKARLLSQIR 461 (482)
Q Consensus 397 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~---------------~~~~~~~~e~~~l~~l~ 461 (482)
..+......|...+.||+|+||.||+|+..+|+.||+|.++....... .....|.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455556777799999999999999997799999999864321110 13467999999999999
Q ss_pred CCCccceeEEEEeCCEEEEEC
Q 036034 462 HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 462 H~niv~l~g~~~~~~~~~lv~ 482 (482)
| +++.+++.. +..|+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvm 179 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLM 179 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEE
T ss_pred --C-CCcCeEEec-cceEEEE
Confidence 4 666665543 4446664
No 412
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.70 E-value=2.5e-05 Score=75.88 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=47.9
Q ss_pred HhhcccccceeCccCcEEEEEEE-cCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH 462 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H 462 (482)
....|...+.||+|+||.||+|+ ..+|+.||||++...........+.|.+|+.++..++|
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 44567788999999999999999 55799999999874444443445789999999999987
No 413
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.62 E-value=1.1e-05 Score=68.70 Aligned_cols=114 Identities=10% Similarity=0.083 Sum_probs=74.1
Q ss_pred cCCCCCCCEEeCcCC-ccccc----CCccccCCCCCCeeecccCcceecc----CccccCCCCCCEEEccCCccccc---
Q 036034 25 LGRLSKLENLHLSSN-SLVGN----IPSTLGHLTQLTTLAIASNHINVSI----PLEIGNLNFLQVLDLSGNEIRGS--- 92 (482)
Q Consensus 25 ~~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~n~~~~~--- 92 (482)
+..-+.|+.|+|++| .+.+. +...+..-+.|+.|+|++|.+.... ...+..-+.|++|+|+.|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567788888775 65532 4455666677888888888876432 23334457788888888888643
Q ss_pred -CCccCcCCCCCCEEeCcCC---ccccc----CCccccCCCCCCEEEcccccCc
Q 036034 93 -IPSTFGHLKRLKSLDLSQN---KLVGP----IPSSLGHLTQLTTLNMRSNLIN 138 (482)
Q Consensus 93 -~~~~l~~l~~L~~L~L~~n---~l~~~----~~~~l~~l~~L~~L~l~~n~i~ 138 (482)
+.+++...+.|++|+|++| .+... +.+.+..-+.|+.|+++.|.+.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 4556667778888888765 33322 3345566678888888777654
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.57 E-value=1.3e-05 Score=68.28 Aligned_cols=111 Identities=13% Similarity=0.161 Sum_probs=77.3
Q ss_pred CCccccCCCCCCeeecccC-cceec----cCccccCCCCCCEEEccCCccccc----CCccCcCCCCCCEEeCcCCcccc
Q 036034 45 IPSTLGHLTQLTTLAIASN-HINVS----IPLEIGNLNFLQVLDLSGNEIRGS----IPSTFGHLKRLKSLDLSQNKLVG 115 (482)
Q Consensus 45 ~~~~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~ 115 (482)
+...+.+-+.|++|+|++| ++... +..++..-+.|+.|+|++|.+.+. +.+.+...+.|++|+|++|.|++
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3444566778999999885 76532 345566667899999999988754 44455567889999999998875
Q ss_pred c----CCccccCCCCCCEEEcccc---cCcc-----------cccCcCEEEcccCeec
Q 036034 116 P----IPSSLGHLTQLTTLNMRSN---LINA-----------SLVNLTSLSLHYNNLT 155 (482)
Q Consensus 116 ~----~~~~l~~l~~L~~L~l~~n---~i~~-----------~~~~L~~L~l~~n~~~ 155 (482)
. +.+++..-+.|++|+|++| .+.. .-+.|+.|+++.|.+.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 4 3344566677999999765 3342 1457888888877654
No 415
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.54 E-value=0.00015 Score=65.42 Aligned_cols=61 Identities=20% Similarity=0.118 Sum_probs=45.1
Q ss_pred cccccceeCccCcEEEEEEEc-CCCCE--EEEEEeccccccc---------------------hhhHHHHHHHHHHHhcC
Q 036034 405 DFHIKYCIGTGGYGSVYRARL-PSGKV--VALKKLHCSETEE---------------------LTSLESFRNKARLLSQI 460 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~-~~~~~--vavK~l~~~~~~~---------------------~~~~~~~~~e~~~l~~l 460 (482)
-|...+.||+|+||.||+|+. .+|+. ||||+++...... ......+.+|++++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999997 67888 9999875321110 01123688999999999
Q ss_pred CCCCc
Q 036034 461 RHRNI 465 (482)
Q Consensus 461 ~H~ni 465 (482)
+|+++
T Consensus 128 ~~~~i 132 (258)
T 1zth_A 128 KEAGV 132 (258)
T ss_dssp HHTTC
T ss_pred HhCCC
Confidence 88864
No 416
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.35 E-value=0.00018 Score=72.70 Aligned_cols=71 Identities=13% Similarity=0.033 Sum_probs=48.3
Q ss_pred eCccCcEEEEEEE-cCCCCEEEEEEecccccc-------chhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYGSVYRAR-LPSGKVVALKKLHCSETE-------ELTSLESFRNKARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g~v~~~~-~~~~~~vavK~l~~~~~~-------~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 482 (482)
.+.|..|.++.++ +-.|+.+|||++...... .....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555443 234888999999644211 122346799999999999 6999999999999999999997
No 417
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=96.94 E-value=0.00017 Score=68.38 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=32.4
Q ss_pred HHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEecc
Q 036034 400 IEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHC 438 (482)
Q Consensus 400 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~ 438 (482)
.+.-.-|.+...||+|+||.||+|..++|+.||||+++.
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~ 129 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL 129 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence 333334788899999999999999988899999998753
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0026 Score=50.33 Aligned_cols=55 Identities=24% Similarity=0.265 Sum_probs=27.0
Q ss_pred EEeccCCccc-cCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccCcc
Q 036034 9 HLDLSDNYLW-GYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASNHI 65 (482)
Q Consensus 9 ~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 65 (482)
.++.++++++ ..+|..+ -++|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555553 1334332 13455555555555544444455555555555555544
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.56 E-value=0.0052 Score=48.56 Aligned_cols=56 Identities=23% Similarity=0.183 Sum_probs=29.7
Q ss_pred eeeccCCccc-CCCCccCcCCCCCCEEEcCCCcCcccCCccccCccCCCEEeccCCcCc
Q 036034 218 AVKLYDNKLD-GPIPPELMNCSKLMELELGNNLLRGSIPSEIGKLQELYYLDLSHNFIN 275 (482)
Q Consensus 218 ~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 275 (482)
.++.+++.++ ..+|..+ .++|+.|+|++|.++...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 2333322 134666666666666444445555566666666666554
No 420
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=95.60 E-value=0.034 Score=49.76 Aligned_cols=80 Identities=11% Similarity=0.057 Sum_probs=61.1
Q ss_pred HHHHhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCE
Q 036034 399 IIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKC 477 (482)
Q Consensus 399 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~ 477 (482)
+.....+|......+.|+.+.||+.... ++.+++|+....... ....+.+|++++..+. |..+.++++++.+.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 4455667887888888899999999854 688999998642111 1235888999999884 7778899999998888
Q ss_pred EEEEC
Q 036034 478 MFLIY 482 (482)
Q Consensus 478 ~~lv~ 482 (482)
.|+||
T Consensus 85 ~~lv~ 89 (263)
T 3tm0_A 85 SNLLM 89 (263)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88886
No 421
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=94.10 E-value=0.061 Score=47.85 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=51.5
Q ss_pred HhhcccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCCc--cceeEEEEeCCEEE
Q 036034 402 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRNI--VKLYGFCLHRKCMF 479 (482)
Q Consensus 402 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~ 479 (482)
...++......+.|..+.||++...+|+.+++|...... ...+.+|++++..+.+.++ .+++++..+++..+
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~ 91 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW 91 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence 344455444434566799999987778889999875321 1357789999988864454 45888887777777
Q ss_pred EEC
Q 036034 480 LIY 482 (482)
Q Consensus 480 lv~ 482 (482)
+||
T Consensus 92 ~v~ 94 (264)
T 1nd4_A 92 LLL 94 (264)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=93.82 E-value=0.095 Score=47.64 Aligned_cols=62 Identities=19% Similarity=0.166 Sum_probs=47.3
Q ss_pred cccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCC---CccceeEE
Q 036034 407 HIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHR---NIVKLYGF 471 (482)
Q Consensus 407 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~ 471 (482)
...+.++.|.++.||+++..+|+.++||+..... ......|.+|++.++.++|. .+.+++++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~ 82 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGW 82 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEe
Confidence 3456799999999999998889999999864321 11225689999999999765 56777765
No 423
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.56 E-value=0.2 Score=30.42 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh
Q 036034 343 VPIILAMVALLALIFGILIIRAR 365 (482)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~ 365 (482)
.++++++++++++..+++++.++
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eehhHHHHHHHHHHHHHHHHhhh
Confidence 33333344444333333333333
No 424
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=91.58 E-value=0.019 Score=56.18 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=17.4
Q ss_pred cceeCccCcEEEEEEEcCC-CCEEEE------EEeccccccchhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 036034 409 KYCIGTGGYGSVYRARLPS-GKVVAL------KKLHCSETEELTSLESFRNKARLLSQIRHRNIVKLYGFCLH 474 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~-~~~vav------K~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 474 (482)
.+.+| ||.||+|.+.. ...||| |..+... ......+.|.+|+.++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEEe
Confidence 34466 99999999854 367888 6654322 222344678999999999999999999888654
No 425
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.38 E-value=0.37 Score=29.13 Aligned_cols=18 Identities=11% Similarity=0.229 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 036034 349 MVALLALIFGILIIRARR 366 (482)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~ 366 (482)
+++++++..+++++.++|
T Consensus 20 v~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 333333333333333333
No 426
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.66 E-value=0.83 Score=27.56 Aligned_cols=8 Identities=0% Similarity=0.559 Sum_probs=3.2
Q ss_pred ehHHHHHH
Q 036034 342 LVPIILAM 349 (482)
Q Consensus 342 ~~~~~~~~ 349 (482)
++++++++
T Consensus 14 Ia~~vVGv 21 (44)
T 2jwa_A 14 IISAVVGI 21 (44)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 33444443
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=82.49 E-value=2.1 Score=38.42 Aligned_cols=54 Identities=20% Similarity=0.148 Sum_probs=40.2
Q ss_pred cccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR 461 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~ 461 (482)
.......+|.|..+.||+.+..+|+.+.+|+-..... .....|..|++.|..+.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~---~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc---chhhHHHHHHHHHHHHH
Confidence 3445567899999999999999999999998643221 11245788998888774
No 428
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=81.03 E-value=1.2 Score=41.50 Aligned_cols=71 Identities=15% Similarity=0.289 Sum_probs=46.5
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEec--cccccchhhHHHHHHHHHHHhcCC--CCCccceeEEEEeC---CEEEEE
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLH--CSETEELTSLESFRNKARLLSQIR--HRNIVKLYGFCLHR---KCMFLI 481 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~--~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv 481 (482)
.+.++.|.++.||+.... +..+++|+.. ..... .....+.+|++++..+. +..+.++++++.+. +..|+|
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 456899999999999875 4678888764 22111 12246788999999886 55678889988776 235555
Q ss_pred C
Q 036034 482 Y 482 (482)
Q Consensus 482 ~ 482 (482)
|
T Consensus 120 m 120 (359)
T 3dxp_A 120 M 120 (359)
T ss_dssp E
T ss_pred E
Confidence 4
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=75.95 E-value=2.3 Score=40.30 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=41.5
Q ss_pred cceeCccCcEEEEEEEcC-CCCEEEEEEeccccc--c-c-hhhHHHHHHHHHHHhcCCC--CCcc-ceeEEEEeCCEEEE
Q 036034 409 KYCIGTGGYGSVYRARLP-SGKVVALKKLHCSET--E-E-LTSLESFRNKARLLSQIRH--RNIV-KLYGFCLHRKCMFL 480 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~-~~~~vavK~l~~~~~--~-~-~~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 480 (482)
.+.+|.|.++.||+++.. +++.++||....... . . ......+..|++++..+.+ |..| +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456899999999999754 468899997653211 0 0 0122456778888877632 4444 44443 3444455
Q ss_pred EC
Q 036034 481 IY 482 (482)
Q Consensus 481 v~ 482 (482)
||
T Consensus 113 vm 114 (397)
T 2olc_A 113 VM 114 (397)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 430
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=74.06 E-value=4.2 Score=23.71 Aligned_cols=10 Identities=20% Similarity=0.650 Sum_probs=4.2
Q ss_pred ehHHHHHHHH
Q 036034 342 LVPIILAMVA 351 (482)
Q Consensus 342 ~~~~~~~~~~ 351 (482)
+++++++.++
T Consensus 13 IAGiVvG~v~ 22 (38)
T 2k1k_A 13 IVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHH
T ss_pred eeeeehHHHH
Confidence 3444444443
No 431
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=69.54 E-value=7.7 Score=23.42 Aligned_cols=33 Identities=24% Similarity=0.126 Sum_probs=23.3
Q ss_pred CCcceeehHHHHHHHHHHHHHHHHHHhhhhhcc
Q 036034 336 KKIATRLVPIILAMVALLALIFGILIIRARRDK 368 (482)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (482)
..++..+++.++++++++++.+.+.-.+++++|
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 346677777777777777777778887777654
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=65.97 E-value=12 Score=33.93 Aligned_cols=67 Identities=21% Similarity=0.210 Sum_probs=50.4
Q ss_pred cceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCEEEEEC
Q 036034 409 KYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIR---HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 409 ~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 482 (482)
...++.|.+..+|+... +++.+++|+-... ....|.+|++.+..+. ...+.+.++++...+..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 45689999999999986 4678888876421 2357889998888773 356778888888777777775
No 433
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=63.05 E-value=19 Score=26.17 Aligned_cols=42 Identities=19% Similarity=0.141 Sum_probs=19.5
Q ss_pred cCCccccCCCCCCeeecccCcceeccCccccCCCCCCEEEccC
Q 036034 44 NIPSTLGHLTQLTTLAIASNHINVSIPLEIGNLNFLQVLDLSG 86 (482)
Q Consensus 44 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 86 (482)
+-...|.++++|+.+.|..+ ++.....+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344555555555555432 2323344555555555555543
No 434
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=61.87 E-value=6.1 Score=23.83 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=17.5
Q ss_pred ceeehHHHHHHHHHHHHHHHHHHhhhhhccc
Q 036034 339 ATRLVPIILAMVALLALIFGILIIRARRDKK 369 (482)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (482)
+..+++.+.++++++...+.+.-.+++++|+
T Consensus 13 A~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred EEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 3444444555555556666666666665543
No 435
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.63 E-value=12 Score=27.38 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=38.6
Q ss_pred CccccCCCcccCCCCCCCEEeCcCCcccccCCccccCCCCCCeeecccC
Q 036034 15 NYLWGYIPPTLGRLSKLENLHLSSNSLVGNIPSTLGHLTQLTTLAIASN 63 (482)
Q Consensus 15 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 63 (482)
..++.+-...|.++.+|+.+.|-.+ ++.+-...|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3456666788999999999999876 55566778999999999998764
No 436
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=58.03 E-value=38 Score=29.45 Aligned_cols=65 Identities=15% Similarity=0.137 Sum_probs=45.5
Q ss_pred eCccCcE-EEEEEEcC-CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCEEEEEC
Q 036034 412 IGTGGYG-SVYRARLP-SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 482 (482)
Q Consensus 412 ig~g~~g-~v~~~~~~-~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 482 (482)
+..|..| .||+.... +++.+.+|+-... ...++.+|.+.+..+. +--+-++++++.+.+..|+||
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvm 99 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLT 99 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEE
Confidence 4445554 68988754 4667888875421 2356888999988774 334668889999988888886
No 437
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=51.35 E-value=16 Score=33.14 Aligned_cols=49 Identities=8% Similarity=0.082 Sum_probs=35.1
Q ss_pred cccccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCC
Q 036034 405 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRH 462 (482)
Q Consensus 405 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H 462 (482)
.+...+.++.|....||+. |+.+++|+.... .....+.+|.+++..+.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~ 86 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-----SVRISQKRELELYRFLEN 86 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHh
Confidence 3445667899999999987 566888875321 112458899988888865
No 438
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=51.01 E-value=47 Score=30.71 Aligned_cols=66 Identities=11% Similarity=0.184 Sum_probs=45.7
Q ss_pred ccceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCCC--ccceeEEEEeC-CEEEEEC
Q 036034 408 IKYCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHRN--IVKLYGFCLHR-KCMFLIY 482 (482)
Q Consensus 408 ~~~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~ 482 (482)
....++.|....+|+.+. +++.+++|.-... ..+.+|+.++..+.... +.++++++.+. +..|+||
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 346688899999999886 5778888876321 25788888888876433 45667776654 4455654
No 439
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=43.55 E-value=33 Score=19.08 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 036034 346 ILAMVALLALIFGILIIRARR 366 (482)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~ 366 (482)
+++.++++....+.+++++.|
T Consensus 13 i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 13 IAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeEEEccc
Confidence 333444333333444455543
No 440
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=27.09 E-value=85 Score=27.99 Aligned_cols=64 Identities=13% Similarity=0.059 Sum_probs=41.4
Q ss_pred ceeCccCcEEEEEEEcCCCCEEEEEEeccccccchhhHHHHHHHHHHHhcCCCC---CccceeEEEE-eCCEEEEEC
Q 036034 410 YCIGTGGYGSVYRARLPSGKVVALKKLHCSETEELTSLESFRNKARLLSQIRHR---NIVKLYGFCL-HRKCMFLIY 482 (482)
Q Consensus 410 ~~ig~g~~g~v~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ 482 (482)
..++.|....||+. |+.+++|.-.. ......+.+|++++..+.+. .+.+.+.++. ..+..|+||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEE
Confidence 45788888899987 56678887421 12336788999999998653 2445566664 233345554
No 441
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=26.10 E-value=20 Score=32.96 Aligned_cols=67 Identities=4% Similarity=-0.040 Sum_probs=40.8
Q ss_pred ccee-CccCcEEEEEEEcC-------CCCEEEEEEeccccccchhhHHHHHHHHHHHhcCC-C--CCccceeEEEEeC
Q 036034 409 KYCI-GTGGYGSVYRARLP-------SGKVVALKKLHCSETEELTSLESFRNKARLLSQIR-H--RNIVKLYGFCLHR 475 (482)
Q Consensus 409 ~~~i-g~g~~g~v~~~~~~-------~~~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H--~niv~l~g~~~~~ 475 (482)
.+.+ +.|....+|+.... +++.+++|.-.............+.+|++++..+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence 3557 88888999988754 25678888764322000001134667888888774 3 3466777777554
Done!