Query 036052
Match_columns 115
No_of_seqs 113 out of 355
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 15:02:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lju_A Putative oxidoreductase 100.0 7.8E-55 2.7E-59 309.8 13.0 95 12-109 12-107 (108)
2 2jya_A AGR_C_3324P, uncharacte 100.0 4E-54 1.4E-58 305.4 8.2 95 12-109 4-99 (106)
3 4b0z_A RPN12, 26S proteasome r 87.4 0.26 8.9E-06 37.3 2.1 21 65-85 199-219 (229)
4 3t5v_A Nuclear mRNA export pro 82.7 0.65 2.2E-05 37.2 2.4 22 65-86 233-254 (316)
5 4b4t_T 26S proteasome regulato 82.6 0.5 1.7E-05 36.9 1.7 21 65-85 208-228 (274)
6 2hpu_A NOSL protein; alpha bet 78.8 1.4 4.8E-05 32.5 3.0 52 32-83 70-132 (175)
7 1ng7_A Poliovirus 3A-N, genome 74.0 1.4 4.7E-05 27.9 1.5 14 72-85 32-45 (60)
8 2yzh_A Probable thiol peroxida 57.8 11 0.00038 25.4 3.7 37 65-103 84-122 (171)
9 3jtn_A YPBH, adapter protein M 54.8 7.2 0.00024 25.3 2.2 17 65-81 4-20 (91)
10 3bsu_A Ribonuclease H1, RNAse 52.6 7.5 0.00026 23.3 1.9 16 65-80 35-50 (53)
11 3jtp_A Adapter protein MECA 1; 51.9 9.2 0.00031 25.2 2.4 18 65-83 10-27 (98)
12 1qhk_A RNAse HI, protein (ribo 49.5 8.7 0.0003 22.5 1.8 14 65-78 33-46 (47)
13 2hw0_A Replicase; alpha+beta, 46.0 23 0.00078 24.3 3.8 24 69-92 87-111 (115)
14 2fiu_A Conserved hypothetical 45.1 14 0.00049 24.2 2.5 15 65-79 58-72 (99)
15 3syx_A Sprouty-related, EVH1 d 44.0 12 0.0004 26.7 2.0 45 31-81 66-115 (130)
16 2nz2_A Argininosuccinate synth 42.5 10 0.00035 31.1 1.8 33 67-104 154-186 (413)
17 1qc6_A EVH1 domain from ENA/VA 42.0 15 0.0005 25.4 2.3 18 65-82 89-106 (130)
18 4dgh_A Sulfate permease family 41.9 11 0.00039 24.8 1.6 15 67-81 111-125 (130)
19 2ebb_A Pterin-4-alpha-carbinol 41.0 18 0.0006 24.2 2.5 30 47-80 14-44 (101)
20 1rz4_A Eukaryotic translation 39.6 9.7 0.00033 28.8 1.1 38 66-103 162-204 (226)
21 1xod_A Spred1; sprouty, EVH1, 38.9 17 0.00058 24.9 2.2 17 65-81 92-108 (118)
22 3lo3_A Uncharacterized conserv 38.9 21 0.00073 23.1 2.6 15 65-79 57-71 (94)
23 3hh1_A Tetrapyrrole methylase 38.2 27 0.00092 23.0 3.1 31 51-89 84-115 (117)
24 3ewt_E Tumor necrosis factor r 37.5 19 0.00066 18.8 1.8 14 70-83 12-25 (25)
25 1egx_A VAsp, vasodilator-stimu 37.5 19 0.00064 24.6 2.2 17 65-81 90-106 (115)
26 2kln_A Probable sulphate-trans 37.1 12 0.00042 24.6 1.2 16 66-81 109-124 (130)
27 1evh_A WH1 domain, protein (ME 37.0 19 0.00066 24.3 2.2 16 65-80 88-103 (112)
28 1usm_A DCOH, hepatocyte nuclea 36.5 22 0.00077 22.5 2.4 30 49-80 1-30 (80)
29 3p3d_A Nucleoporin 53; structu 36.1 16 0.00056 26.0 1.8 21 65-85 66-86 (132)
30 1ddw_A GLGF-domain protein hom 35.5 22 0.00074 24.5 2.3 17 65-81 87-103 (120)
31 1snn_A DHBP synthase, 3,4-dihy 35.3 21 0.00071 27.6 2.4 21 68-88 193-213 (227)
32 3pxi_a Adapter protein MECA 1; 35.2 17 0.00057 24.6 1.6 18 65-83 23-40 (111)
33 2jp2_A Spred-2, sprouty-relate 35.0 21 0.00072 24.8 2.2 17 65-81 101-117 (126)
34 4g2e_A Peroxiredoxin; redox pr 34.1 33 0.0011 23.0 3.0 25 65-89 69-93 (157)
35 1vjq_A Designed protein; struc 33.6 45 0.0015 20.3 3.4 25 65-89 44-68 (79)
36 4fle_A Esterase; structural ge 33.1 13 0.00044 25.0 0.8 34 48-93 8-42 (202)
37 4dgf_A Sulfate transporter sul 32.8 20 0.00069 23.8 1.7 15 67-81 114-128 (135)
38 1tif_A IF3-N, translation init 32.7 33 0.0011 22.3 2.7 28 65-92 25-52 (78)
39 3jst_A Putative pterin-4-alpha 32.7 34 0.0012 22.4 2.9 31 46-80 16-48 (97)
40 2qbu_A Precorrin-2 methyltrans 32.2 41 0.0014 24.1 3.5 33 50-90 98-130 (232)
41 1mwp_A Amyloid A4 protein; hep 32.0 24 0.00083 23.9 2.0 23 65-87 33-55 (96)
42 2gjf_A Designed protein; proca 31.7 66 0.0023 19.5 4.0 24 65-88 52-75 (78)
43 2jpc_A SSRB; DNA binding prote 31.5 18 0.0006 20.5 1.1 19 65-83 40-58 (61)
44 1mwq_A Hypothetical protein HI 30.7 26 0.0009 22.3 2.0 25 65-89 65-96 (101)
45 3eyt_A Uncharacterized protein 30.6 34 0.0012 22.1 2.5 21 69-89 78-98 (158)
46 3drn_A Peroxiredoxin, bacterio 30.4 42 0.0015 22.1 3.1 26 65-90 68-93 (161)
47 3llo_A Prestin; STAS domain, c 29.6 13 0.00044 24.8 0.3 16 66-81 126-141 (143)
48 2v6u_A Pterin-4A-carbinolamine 28.6 37 0.0013 22.6 2.5 33 46-80 19-51 (104)
49 2e0n_A Precorrin-2 C20-methylt 28.6 45 0.0015 24.6 3.2 33 51-91 101-133 (259)
50 1gqe_A Release factor 2, RF2; 28.5 27 0.00094 28.6 2.1 16 75-90 153-168 (365)
51 2a4v_A Peroxiredoxin DOT5; yea 28.0 43 0.0015 22.0 2.8 26 65-90 73-98 (159)
52 3ndc_A Precorrin-4 C(11)-methy 27.7 50 0.0017 24.8 3.4 35 50-92 80-114 (264)
53 3mio_A DHBP synthase, 3,4-dihy 27.7 35 0.0012 25.9 2.5 20 68-87 175-194 (206)
54 2w5f_A Endo-1,4-beta-xylanase 27.5 34 0.0012 28.6 2.6 22 65-86 242-263 (540)
55 1xvw_A Hypothetical protein RV 27.3 35 0.0012 22.2 2.2 26 65-90 75-100 (160)
56 1tp9_A Peroxiredoxin, PRX D (t 27.3 56 0.0019 21.8 3.3 26 65-90 76-103 (162)
57 2p6w_A VP54, putative glycosyl 27.0 27 0.00093 26.9 1.7 20 70-89 25-44 (213)
58 1psq_A Probable thiol peroxida 26.7 45 0.0015 22.1 2.7 26 65-90 79-105 (163)
59 4gqc_A Thiol peroxidase, perox 26.7 51 0.0018 22.4 3.0 26 65-90 72-97 (164)
60 2d73_A Alpha-glucosidase SUSB; 26.5 33 0.0011 30.7 2.4 24 66-89 368-391 (738)
61 3dhx_A Methionine import ATP-b 26.3 53 0.0018 21.4 2.9 25 65-89 68-96 (106)
62 2zib_A Type II antifreeze prot 26.3 37 0.0012 22.1 2.1 39 45-86 8-46 (133)
63 3gkn_A Bacterioferritin comigr 26.1 37 0.0013 22.2 2.2 26 65-90 74-99 (163)
64 1i2h_A PSD-ZIP45(homer-1C/VESL 26.0 36 0.0012 25.0 2.2 17 65-81 92-108 (168)
65 2z6r_A Diphthine synthase; met 25.5 46 0.0016 24.6 2.8 32 51-90 82-113 (265)
66 2ihr_1 Peptide chain release f 25.5 30 0.001 28.5 1.8 16 75-90 141-156 (365)
67 2wfc_A Peroxiredoxin 5, PRDX5; 25.3 56 0.0019 22.4 3.0 26 65-90 72-99 (167)
68 1zbt_A RF-1, peptide chain rel 24.9 31 0.0011 28.4 1.8 16 75-90 150-165 (371)
69 3e21_A HFAF1, FAS-associated f 24.9 27 0.00091 20.4 1.1 18 69-86 19-36 (45)
70 3d5a_X RF1, peptide chain rele 24.9 31 0.0011 28.2 1.8 16 75-90 132-147 (354)
71 3tbi_A RNA polymerase-associat 24.7 28 0.00095 24.5 1.3 15 71-85 59-73 (115)
72 1k4i_A 3,4-dihydroxy-2-butanon 24.5 46 0.0016 25.8 2.7 21 68-88 193-213 (233)
73 2hiq_A Hypothetical protein YD 24.1 34 0.0012 23.8 1.6 29 51-81 48-76 (113)
74 1tks_A 3,4-dihydroxy-2-butanon 24.0 39 0.0013 25.6 2.1 20 68-87 175-194 (204)
75 2ek1_A RNA-binding protein 12; 23.9 62 0.0021 19.4 2.8 21 65-85 61-82 (95)
76 2cqy_A Propionyl-COA carboxyla 23.6 61 0.0021 19.7 2.7 24 67-90 30-53 (108)
77 1rq0_A RF-1, peptide chain rel 23.5 34 0.0012 27.9 1.8 16 75-90 113-128 (342)
78 4e16_A Precorrin-4 C(11)-methy 23.4 58 0.002 24.1 3.0 35 50-92 81-115 (253)
79 4a56_A PULS, pullulanase secre 23.2 33 0.0011 23.1 1.4 13 73-85 38-50 (93)
80 3sol_A Type II secretion pathw 23.0 38 0.0013 22.8 1.7 14 73-86 38-51 (94)
81 3p7x_A Probable thiol peroxida 22.5 65 0.0022 21.4 2.9 27 65-91 82-109 (166)
82 1va0_A Uroporphyrin-III C-meth 22.5 81 0.0028 22.8 3.6 30 52-89 81-110 (239)
83 3a24_A Alpha-galactosidase; gl 22.2 43 0.0015 29.3 2.3 24 66-89 306-329 (641)
84 1s4d_A Uroporphyrin-III C-meth 22.2 63 0.0021 24.4 3.0 34 51-92 97-130 (280)
85 4a8x_A RNA-binding protein wit 22.1 72 0.0025 18.6 2.8 21 64-84 50-71 (88)
86 2b3t_B RF-1, peptide chain rel 22.0 29 0.001 28.4 1.1 16 75-90 136-151 (360)
87 3ced_A Methionine import ATP-b 21.7 75 0.0026 20.5 2.9 24 65-88 67-95 (98)
88 1t0f_A Transposon TN7 transpos 21.5 55 0.0019 25.0 2.6 22 71-92 149-170 (276)
89 1wde_A Probable diphthine synt 21.4 74 0.0025 24.1 3.3 33 51-91 88-120 (294)
90 3md1_A Nuclear and cytoplasmic 21.0 81 0.0028 18.2 2.8 21 65-85 47-68 (83)
91 3raz_A Thioredoxin-related pro 21.0 65 0.0022 20.7 2.6 25 65-89 62-86 (151)
92 2qrr_A Methionine import ATP-b 21.0 73 0.0025 20.4 2.8 24 65-88 70-97 (101)
93 2k89_A PLA2P, PLAP, phospholip 20.7 44 0.0015 21.9 1.6 14 71-84 42-55 (80)
94 1r85_A Endo-1,4-beta-xylanase; 20.7 48 0.0017 26.6 2.2 26 65-90 72-97 (379)
95 1v0l_A Endo-1,4-beta-xylanase 20.6 38 0.0013 26.4 1.5 24 65-88 58-81 (313)
96 1ta3_B Endo-1,4-beta-xylanase; 20.3 43 0.0015 25.9 1.7 25 65-89 59-83 (303)
97 3ulh_A THO complex subunit 4; 20.3 79 0.0027 19.4 2.8 21 65-85 74-95 (107)
98 3ktm_A Amyloid beta A4 protein 20.2 47 0.0016 25.1 1.9 23 65-87 44-66 (191)
99 1je8_A Nitrate/nitrite respons 20.2 48 0.0016 20.3 1.7 19 65-83 63-81 (82)
100 3bs9_A Nucleolysin TIA-1 isofo 20.2 84 0.0029 18.4 2.8 20 65-84 52-72 (87)
101 1ve2_A Uroporphyrin-III C-meth 20.1 86 0.003 22.6 3.3 33 52-92 84-116 (235)
102 2cpe_A RNA-binding protein EWS 20.1 84 0.0029 19.5 2.9 22 64-85 68-90 (113)
103 3ro8_A Endo-1,4-beta-xylanase; 20.0 39 0.0013 26.9 1.5 22 65-86 58-79 (341)
No 1
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=100.00 E-value=7.8e-55 Score=309.85 Aligned_cols=95 Identities=34% Similarity=0.589 Sum_probs=92.3
Q ss_pred CeEEEecCCCCCCCCCCCCCCCcEEEccCC-CCCCCCCCCccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecC
Q 036052 12 RRVVIYTPARTATQQGSGKIGRWKINFMSK-QKWENPLMGWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 12 r~vrIy~pak~amQSG~~~t~~W~lefe~~-~~~~~PLMGWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
++||||+|+|+|||||++++++|+|||++. ++|+|||||||||+||++|| +|+|+|+|+||+|||+|||+|+|++|
T Consensus 12 ~~arIy~Pak~amQSG~~~t~~W~lefe~~~~r~~nPLMGWtsS~D~~~qv---~L~F~skE~AiayAek~G~~y~V~ep 88 (108)
T 2lju_A 12 VRARIYKPAKSTMQSGHSKLKAWKLEFEPSCTQYTEPLMNWTGSHDTKQQV---CLSFTTRELAIAYAVAHKIDYTVLQD 88 (108)
T ss_dssp CEEEEECCCCCCSSSSCCSCCCEEEEECCCSSCCCCCCCCCSSSCCCCCCS---CEEESSHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCCCccccCCCCCCceEEEEecCCCCccCCCccccCCCCccccc---eEecCCHHHHHHHHHHcCCEEEEecC
Confidence 789999999999999999999999999996 59999999999999999999 99999999999999999999999999
Q ss_pred CCCcCCCccccccCCCCCC
Q 036052 91 HRPLLNVKSYAEHFKWKGP 109 (115)
Q Consensus 91 ~~~~~~~ksYadNF~~~~~ 109 (115)
+.+++++|||||||+|+++
T Consensus 89 ~~~~~r~ksYadNF~~~r~ 107 (108)
T 2lju_A 89 NPRTIVPKSYADNFTKPRD 107 (108)
T ss_dssp SCCCCCCCCCCCCCCCCCC
T ss_pred CcccCCcCchHHHCCccCC
Confidence 9999999999999999975
No 2
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4e-54 Score=305.35 Aligned_cols=95 Identities=35% Similarity=0.637 Sum_probs=77.2
Q ss_pred CeEEEecCCCCCCCCCCCCCCCcEEEccCC-CCCCCCCCCccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecC
Q 036052 12 RRVVIYTPARTATQQGSGKIGRWKINFMSK-QKWENPLMGWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 12 r~vrIy~pak~amQSG~~~t~~W~lefe~~-~~~~~PLMGWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
.+||||+|+|+|||||++++++|+||||+. ++|+|||||||||+||++|| +|+|+|+|+||+|||+|||+|+|++|
T Consensus 4 m~arIy~Pak~amQSG~~~t~~W~lefe~~~~rw~nPLMGWtsS~D~~~qv---~L~F~skE~AiayAek~G~~y~V~ep 80 (106)
T 2jya_A 4 MSAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQV---KLTFETQEQAEAYAQRKGIEYRVILP 80 (106)
T ss_dssp CEEEEECCSSCCCTTTTCCSCCEEEEEEEECCSCCCTTTCSCSCCCSEEEE---EEEESSHHHHHHHHHHHTCEEEECCC
T ss_pred cEEEEeCCCCCccccCCCCCCceEEEEecCCCCccCCCcCcCCCCCccccc---eEecCCHHHHHHHHHHcCCEEEEeCC
Confidence 579999999999999999999999999996 79999999999999999999 99999999999999999999999999
Q ss_pred CCCcCCCccccccCCCCCC
Q 036052 91 HRPLLNVKSYAEHFKWKGP 109 (115)
Q Consensus 91 ~~~~~~~ksYadNF~~~~~ 109 (115)
+.+++++|||||||+|+.+
T Consensus 81 ~~~~~r~ksYadNF~~~r~ 99 (106)
T 2jya_A 81 KEATRKVVSYTDNFRFNRT 99 (106)
T ss_dssp TTC----------------
T ss_pred CcCcCCcCchHHhCCcCCC
Confidence 9999999999999999865
No 3
>4b0z_A RPN12, 26S proteasome regulatory subunit RPN12; protein binding, proteasome ubitquitin; HET: SGM GOL; 1.58A {Schizosaccharomyces pombe}
Probab=87.43 E-value=0.26 Score=37.27 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=19.6
Q ss_pred eeecCCHHHHHHHHHHcCccE
Q 036052 65 GLSFDSEEAAREFAERHGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y 85 (115)
.|.|+|.++++.||+++||..
T Consensus 199 ~L~f~s~~e~~~f~~~~gw~i 219 (229)
T 4b0z_A 199 LLYLENTKETEKLAEERGWDI 219 (229)
T ss_dssp HTTCSSHHHHHHHHHHHTCEE
T ss_pred HhCCCCHHHHHHHHHHcCCEE
Confidence 589999999999999999976
No 4
>3t5v_A Nuclear mRNA export protein SAC3; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=82.67 E-value=0.65 Score=37.15 Aligned_cols=22 Identities=23% Similarity=0.304 Sum_probs=20.7
Q ss_pred eeecCCHHHHHHHHHHcCccEE
Q 036052 65 GLSFDSEEAAREFAERHGWEYV 86 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~ 86 (115)
.|.|+|.|+|++||+.+||.+.
T Consensus 233 ~L~Fds~ee~~~F~~~~gl~~~ 254 (316)
T 3t5v_A 233 MLLFNNRQEIIEFCNYYSIEII 254 (316)
T ss_dssp HTTCSSHHHHHHHHHHTTCCEE
T ss_pred HhCCCCHHHHHHHHHHCCCeEe
Confidence 5899999999999999999996
No 5
>4b4t_T 26S proteasome regulatory subunit RPN12; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.63 E-value=0.5 Score=36.87 Aligned_cols=21 Identities=29% Similarity=0.555 Sum_probs=19.4
Q ss_pred eeecCCHHHHHHHHHHcCccE
Q 036052 65 GLSFDSEEAAREFAERHGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y 85 (115)
.|.|+|.+++++||+++||..
T Consensus 208 ~L~F~s~~e~~~F~~~~gW~~ 228 (274)
T 4b4t_T 208 LLFFNNEKETEKFALERNWPI 228 (274)
T ss_dssp HHTCCSHHHHHHHHHHTTCCC
T ss_pred HhCCCCHHHHHHHHHHcCCEE
Confidence 588999999999999999975
No 6
>2hpu_A NOSL protein; alpha beta topology, metal transport; NMR {Achromobacter cycloclastes} SCOP: d.357.1.1 PDB: 2hq3_A
Probab=78.83 E-value=1.4 Score=32.50 Aligned_cols=52 Identities=19% Similarity=0.398 Sum_probs=33.9
Q ss_pred CCcEEEccC-CCCCCCCCCC-ccC--------CCCcccccC-CceeecCCHHHHHHHHHHcCc
Q 036052 32 GRWKINFMS-KQKWENPLMG-WTS--------TGDPYANVG-DAGLSFDSEEAAREFAERHGW 83 (115)
Q Consensus 32 ~~W~lefe~-~~~~~~PLMG-Wts--------s~D~~~qv~-~~~l~F~skE~Ai~yaek~G~ 83 (115)
..|+-+|.. ...|+.|--+ |.. .+|-..-++ ..-+-|.++++|.+|++++|=
T Consensus 70 aiyV~D~~t~~~~w~~p~~~~wIdA~~A~YVvgS~~~gpMG~~~l~pFa~k~dAe~Fa~~~GG 132 (175)
T 2hpu_A 70 VIYVNDMGAAGATWDQPGDGNWIAADKAFYVVGSARRGGMGAPEAVPFSSRDEAAAFVLAEGG 132 (175)
T ss_dssp EEEEEESCTTSSCTTCSCCCEEECGGGSEEEEESSSSCSSSCCCEEEESCHHHHHHHHHHTEE
T ss_pred EEEEEcCcccccccccCCCCceEECCeeEEEeCCCCCCCCCCCcccCcCCHHHHHHHHHHcCC
Confidence 568999987 3556655221 422 233223333 346889999999999999984
No 7
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=74.02 E-value=1.4 Score=27.89 Aligned_cols=14 Identities=29% Similarity=0.921 Sum_probs=12.5
Q ss_pred HHHHHHHHHcCccE
Q 036052 72 EAAREFAERHGWEY 85 (115)
Q Consensus 72 E~Ai~yaek~G~~y 85 (115)
|+-+.||+++||-.
T Consensus 32 ~eV~~YC~~kGwIi 45 (60)
T 1ng7_A 32 QEVRDYCEKKGWIV 45 (60)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHCCcee
Confidence 67799999999986
No 8
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=57.80 E-value=11 Score=25.42 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=28.0
Q ss_pred eeecCCHHHHHHHHHHcCc-cEEEecC-CCCcCCCcccccc
Q 036052 65 GLSFDSEEAAREFAERHGW-EYVVRKP-HRPLLNVKSYAEH 103 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~-~y~V~~p-~~~~~~~ksYadN 103 (115)
-+..++.++..+|++++|+ .|.+... ..... +.|+-.
T Consensus 84 ~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~--~~~gv~ 122 (171)
T 2yzh_A 84 VVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM--EKYGVL 122 (171)
T ss_dssp EEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG--GGGTCB
T ss_pred EEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH--HHhCCE
Confidence 5678999999999999999 8887665 33333 777654
No 9
>3jtn_A YPBH, adapter protein MECA 2; adaptor protein, competence, sporulation, protein binding; 2.09A {Bacillus subtilis} PDB: 3jto_A
Probab=54.75 E-value=7.2 Score=25.31 Aligned_cols=17 Identities=24% Similarity=0.155 Sum_probs=15.6
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
.++|++.|+.|++|+..
T Consensus 4 i~~F~~~edvI~~a~~l 20 (91)
T 3jtn_A 4 IYQFHSFEDIIQLSESL 20 (91)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHc
Confidence 68999999999999975
No 10
>3bsu_A Ribonuclease H1, RNAse H1; RNAse H, RNA/DNA hybrid; HET: DNA 5IU; 2.10A {Homo sapiens}
Probab=52.62 E-value=7.5 Score=23.30 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=13.5
Q ss_pred eeecCCHHHHHHHHHH
Q 036052 65 GLSFDSEEAAREFAER 80 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek 80 (115)
--+|.|+++|.+|.+.
T Consensus 35 yK~F~t~~eA~~~l~~ 50 (53)
T 3bsu_A 35 FKKFATEDEAWAFVRK 50 (53)
T ss_dssp EEEESSHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHh
Confidence 4579999999999864
No 11
>3jtp_A Adapter protein MECA 1; MECA;adaptor protein;degradation TAG, competence, sporulation, protein binding; 2.17A {Bacillus subtilis} PDB: 2y1r_I* 3pxg_a
Probab=51.85 E-value=9.2 Score=25.21 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=15.9
Q ss_pred eeecCCHHHHHHHHHHcCc
Q 036052 65 GLSFDSEEAAREFAERHGW 83 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~ 83 (115)
.+.|++.|+.|++|+ .+.
T Consensus 10 i~~F~d~edvI~~a~-~~~ 27 (98)
T 3jtp_A 10 VLRFGDFEDVISLSK-LNV 27 (98)
T ss_dssp EEEESSHHHHHHHHH-TTC
T ss_pred EEEcCCHHHHHHHhC-CCC
Confidence 689999999999999 543
No 12
>1qhk_A RNAse HI, protein (ribonuclease HI); ribonuclease HI N-terminal domain, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.100.1.2
Probab=49.48 E-value=8.7 Score=22.46 Aligned_cols=14 Identities=36% Similarity=0.411 Sum_probs=12.0
Q ss_pred eeecCCHHHHHHHH
Q 036052 65 GLSFDSEEAAREFA 78 (115)
Q Consensus 65 ~l~F~skE~Ai~ya 78 (115)
--+|.|+++|.+|.
T Consensus 33 yK~F~t~~eA~~~l 46 (47)
T 1qhk_A 33 YKKFNSYEQAKSFL 46 (47)
T ss_dssp CEEESCHHHHHHHH
T ss_pred cCCCCCHHHHHHHh
Confidence 45799999999985
No 13
>2hw0_A Replicase; alpha+beta, hydrolase, replication; NMR {Porcine circovirus 2}
Probab=46.01 E-value=23 Score=24.31 Aligned_cols=24 Identities=13% Similarity=0.354 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHHcCcc-EEEecCCC
Q 036052 69 DSEEAAREFAERHGWE-YVVRKPHR 92 (115)
Q Consensus 69 ~skE~Ai~yaek~G~~-y~V~~p~~ 92 (115)
.|.++|++||.|.|=- ++.-+|..
T Consensus 87 gs~~q~~~Yc~Keg~~i~e~G~~~~ 111 (115)
T 2hw0_A 87 GTDQQNKEYCSKEGNLLMECGAPRS 111 (115)
T ss_dssp SCHHHHHHHHHTTSCEEEEEECCCC
T ss_pred CCHHHHHHHhccCCcEEEEeccccc
Confidence 4789999999999843 46655553
No 14
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=45.06 E-value=14 Score=24.19 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=13.5
Q ss_pred eeecCCHHHHHHHHH
Q 036052 65 GLSFDSEEAAREFAE 79 (115)
Q Consensus 65 ~l~F~skE~Ai~yae 79 (115)
-+.|+|.|+|.++..
T Consensus 58 iieFpS~~aa~~~~~ 72 (99)
T 2fiu_A 58 VIEFPSVQHAIDCYN 72 (99)
T ss_dssp EEEESSHHHHHHHHH
T ss_pred EEECCCHHHHHHHHc
Confidence 789999999999864
No 15
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=43.99 E-value=12 Score=26.68 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=29.0
Q ss_pred CCCcEEEccCCC--CC---CCCCCCccCCCCcccccCCceeecCCHHHHHHHHHHc
Q 036052 31 IGRWKINFMSKQ--KW---ENPLMGWTSTGDPYANVGDAGLSFDSEEAAREFAERH 81 (115)
Q Consensus 31 t~~W~lefe~~~--~~---~~PLMGWtss~D~~~qv~~~~l~F~skE~Ai~yaek~ 81 (115)
.+.++|++.-.. .+ ...+--|.-+ | ++- -|.|.|+|||-+|++..
T Consensus 66 d~~vvinc~I~~~l~Ynkatp~FHqWrd~-~---~~y--GL~F~S~~dA~~F~~~~ 115 (130)
T 3syx_A 66 DKMVVLECMLKKDLIYNKVTPTFHHWKID-D---KKF--GLTFQSPADARAFDRGI 115 (130)
T ss_dssp TCCEEEEEECCTTCEEEEEETTEEEEEET-T---EEE--EEEESSHHHHHHHHHHH
T ss_pred CCeEEEeeeecCCceEEeccccccccccc-C---eEe--ecccCCHHHHHHHHHHH
Confidence 466888876432 11 2344556543 2 332 79999999999999753
No 16
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=42.45 E-value=10 Score=31.07 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=23.0
Q ss_pred ecCCHHHHHHHHHHcCccEEEecCCCCcCCCccccccC
Q 036052 67 SFDSEEAAREFAERHGWEYVVRKPHRPLLNVKSYAEHF 104 (115)
Q Consensus 67 ~F~skE~Ai~yaek~G~~y~V~~p~~~~~~~ksYadNF 104 (115)
.|.++++-++||+++|+++... |. .+-|+..||
T Consensus 154 ~~~sK~EI~~yA~~~Gip~~~~-~~----~~~S~d~n~ 186 (413)
T 2nz2_A 154 RFKGRNDLMEYAKQHGIPIPVT-PK----NPWSMDENL 186 (413)
T ss_dssp TCC-CHHHHHHHHHTTCCCCSS-CC----CSSCEEECS
T ss_pred cCCCHHHHHHHHHHcCCCeecC-CC----CCCCCChhh
Confidence 4669999999999999998642 22 234556666
No 17
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=41.97 E-value=15 Score=25.43 Aligned_cols=18 Identities=39% Similarity=0.556 Sum_probs=15.9
Q ss_pred eeecCCHHHHHHHHHHcC
Q 036052 65 GLSFDSEEAAREFAERHG 82 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G 82 (115)
-|.|.|.|||-+|.++.-
T Consensus 89 GL~F~se~eA~~F~~~~~ 106 (130)
T 1qc6_A 89 GLNFASKEEATTFSNAML 106 (130)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHH
Confidence 899999999999987643
No 18
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=41.86 E-value=11 Score=24.77 Aligned_cols=15 Identities=20% Similarity=0.014 Sum_probs=13.3
Q ss_pred ecCCHHHHHHHHHHc
Q 036052 67 SFDSEEAAREFAERH 81 (115)
Q Consensus 67 ~F~skE~Ai~yaek~ 81 (115)
.|+|.++|++.|+.+
T Consensus 111 i~~s~~~Al~~~~~~ 125 (130)
T 4dgh_A 111 VYPVFEGALSAALTE 125 (130)
T ss_dssp EESSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 699999999999864
No 19
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=41.04 E-value=18 Score=24.15 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=23.5
Q ss_pred CCCCccCCCCc-ccccCCceeecCCHHHHHHHHHH
Q 036052 47 PLMGWTSTGDP-YANVGDAGLSFDSEEAAREFAER 80 (115)
Q Consensus 47 PLMGWtss~D~-~~qv~~~~l~F~skE~Ai~yaek 80 (115)
.|-||+-.++. +.. +.+|.+-.+|++|..+
T Consensus 14 ~l~gW~~~~~~~i~r----~f~F~~f~~a~~F~~~ 44 (101)
T 2ebb_A 14 KADGWKLADERWIVK----KYRFQDYLQGIEFVRR 44 (101)
T ss_dssp TSTTCEEETTTEEEE----EEECSSHHHHHHHHHH
T ss_pred cCCCCeECCCCCEEE----EEEeCCHHHHHHHHHH
Confidence 57799888777 333 7899999999998654
No 20
>1rz4_A Eukaryotic translation initiation factor 3 subuni; heat analogous motif, winged-helix, biosynthetic protein; 2.10A {Homo sapiens} SCOP: a.4.5.53 a.118.1.18
Probab=39.55 E-value=9.7 Score=28.84 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=24.7
Q ss_pred eecCCHHHHHHHHHHcCccEE-----EecCCCCcCCCcccccc
Q 036052 66 LSFDSEEAAREFAERHGWEYV-----VRKPHRPLLNVKSYAEH 103 (115)
Q Consensus 66 l~F~skE~Ai~yaek~G~~y~-----V~~p~~~~~~~ksYadN 103 (115)
|-|.|.++...||+++||..+ +...+....++|...++
T Consensus 162 Lg~~s~~el~~fi~~~GW~vd~~g~I~~~n~e~~~k~~~~~E~ 204 (226)
T 1rz4_A 162 LGDLSDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEK 204 (226)
T ss_dssp TTSCCHHHHHHHHHHHTCEECC--CEECCCHHHHTSCCCSSCC
T ss_pred HcCCCHHHHHHHHHHCCCEECCCccEEeCCCcccccceeeeec
Confidence 336899999999999999873 11122223455555554
No 21
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=38.94 E-value=17 Score=24.92 Aligned_cols=17 Identities=41% Similarity=0.636 Sum_probs=15.4
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
-|.|.|++||-+|+++.
T Consensus 92 GL~F~se~eA~~F~~~v 108 (118)
T 1xod_A 92 GLTFQSPADARAFDRGI 108 (118)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHH
Confidence 79999999999998864
No 22
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=38.85 E-value=21 Score=23.10 Aligned_cols=15 Identities=33% Similarity=0.339 Sum_probs=13.5
Q ss_pred eeecCCHHHHHHHHH
Q 036052 65 GLSFDSEEAAREFAE 79 (115)
Q Consensus 65 ~l~F~skE~Ai~yae 79 (115)
-+.|+|.|+|.++..
T Consensus 57 iieFps~~aa~a~y~ 71 (94)
T 3lo3_A 57 ILEFPSREDAYNWYH 71 (94)
T ss_dssp EEEESSHHHHHHHHH
T ss_pred EEECCCHHHHHHHHC
Confidence 799999999999864
No 23
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=38.19 E-value=27 Score=22.98 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=24.3
Q ss_pred ccC-CCCcccccCCceeecCCHHHHHHHHHHcCccEEEec
Q 036052 51 WTS-TGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 51 Wts-s~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
--+ +|||. -|++-.+-++.|++.|++++|..
T Consensus 84 ~l~d~GdP~--------i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 84 LVTDAGTPA--------ISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp EEEETTSCG--------GGSTTHHHHHHHHHTTCCEEEEC
T ss_pred EEecCCcCe--------EeccHHHHHHHHHHCCCcEEEeC
Confidence 344 57773 48888888999999999999864
No 24
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=37.53 E-value=19 Score=18.82 Aligned_cols=14 Identities=14% Similarity=0.385 Sum_probs=11.6
Q ss_pred CHHHHHHHHHHcCc.
Q 036052 70 SEEAAREFAERHGW. 83 (115)
Q Consensus 70 skE~Ai~yaek~G~. 83 (115)
+..+...|+++||+
T Consensus 12 ~~~~Vk~fvR~~gi. 25 (25)
T 3ewt_E 12 TLSQVKGFVRKNGVx 26 (26)
T ss_pred hHHHHHHHHHHcCC.
Confidence 46788999999985
No 25
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=37.53 E-value=19 Score=24.58 Aligned_cols=17 Identities=47% Similarity=0.704 Sum_probs=15.2
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
-|.|.|.+||-+|+++.
T Consensus 90 GLnF~se~eA~~F~~~v 106 (115)
T 1egx_A 90 GLNFGSKEDAAQFAAGM 106 (115)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHH
Confidence 79999999999998763
No 26
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=37.05 E-value=12 Score=24.62 Aligned_cols=16 Identities=19% Similarity=0.050 Sum_probs=14.0
Q ss_pred eecCCHHHHHHHHHHc
Q 036052 66 LSFDSEEAAREFAERH 81 (115)
Q Consensus 66 l~F~skE~Ai~yaek~ 81 (115)
-.|+|.++|++.|++.
T Consensus 109 ~i~~t~~~Al~~~~~~ 124 (130)
T 2kln_A 109 HIFMTLPTAVQAFRRR 124 (130)
T ss_dssp EEESCHHHHHHHHTTC
T ss_pred eeECCHHHHHHHHHhh
Confidence 3699999999999985
No 27
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=36.95 E-value=19 Score=24.34 Aligned_cols=16 Identities=50% Similarity=0.731 Sum_probs=14.8
Q ss_pred eeecCCHHHHHHHHHH
Q 036052 65 GLSFDSEEAAREFAER 80 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek 80 (115)
-|.|.|.+||-+|++.
T Consensus 88 GLnF~se~eA~~F~~~ 103 (112)
T 1evh_A 88 GLNFGSKEDANVFASA 103 (112)
T ss_dssp EEEESSHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHH
Confidence 7999999999999875
No 28
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=36.53 E-value=22 Score=22.49 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=19.8
Q ss_pred CCccCCCCcccccCCceeecCCHHHHHHHHHH
Q 036052 49 MGWTSTGDPYANVGDAGLSFDSEEAAREFAER 80 (115)
Q Consensus 49 MGWtss~D~~~qv~~~~l~F~skE~Ai~yaek 80 (115)
+||+-.+++.. |. .+.+|.+-.+|++|..+
T Consensus 1 ~gW~~~~~~~~-i~-r~f~F~~f~~a~~F~~~ 30 (80)
T 1usm_A 1 MDWEERENLKR-LV-KTFAFPNFREALDFANR 30 (80)
T ss_dssp CCCEEC---CC-EE-EEEECSSHHHHHHHHHH
T ss_pred CCCeEeCCccE-EE-EEEEeCCHHHHHHHHHH
Confidence 58887777422 21 37899999999998655
No 29
>3p3d_A Nucleoporin 53; structural genomics, PSI-2, protein structure initiative, NE structural genomix research consortium, nysgxrc; 2.35A {Pichia guilliermondii}
Probab=36.09 E-value=16 Score=26.03 Aligned_cols=21 Identities=14% Similarity=0.305 Sum_probs=19.3
Q ss_pred eeecCCHHHHHHHHHHcCccE
Q 036052 65 GLSFDSEEAAREFAERHGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y 85 (115)
+|+|+|+.+|.+-+.++|--+
T Consensus 66 kItYds~~~A~rAL~~NG~ii 86 (132)
T 3p3d_A 66 KITYDNPASAVDALLENGAVF 86 (132)
T ss_dssp EEEBSSHHHHHHHHTTTTCEE
T ss_pred EEEcCCHHHHHHHHHhCCeEe
Confidence 899999999999999999654
No 30
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=35.50 E-value=22 Score=24.54 Aligned_cols=17 Identities=47% Similarity=0.770 Sum_probs=15.1
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
-|.|.|+|||-+|++..
T Consensus 87 GLnF~s~~eA~~F~~~~ 103 (120)
T 1ddw_A 87 GLGFSSEHHLSKFAEKF 103 (120)
T ss_dssp EEECSSHHHHHHHHHHH
T ss_pred EeccCCHHHHHHHHHHH
Confidence 79999999999998753
No 31
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=35.30 E-value=21 Score=27.60 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=17.7
Q ss_pred cCCHHHHHHHHHHcCccEEEe
Q 036052 68 FDSEEAAREFAERHGWEYVVR 88 (115)
Q Consensus 68 F~skE~Ai~yaek~G~~y~V~ 88 (115)
-..++++++||++||+++.-.
T Consensus 193 mar~~~l~~fA~~h~l~~iti 213 (227)
T 1snn_A 193 AMSKNETKRYAEKHNLIYLSG 213 (227)
T ss_dssp BCCHHHHHHHHHHHTCCEEEH
T ss_pred cCCHHHHHHHHHHcCCcEEEH
Confidence 357899999999999998644
No 32
>3pxi_a Adapter protein MECA 1; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=35.18 E-value=17 Score=24.63 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=15.9
Q ss_pred eeecCCHHHHHHHHHHcCc
Q 036052 65 GLSFDSEEAAREFAERHGW 83 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~ 83 (115)
.+.|++.|+.|++|+ .+.
T Consensus 23 i~~F~dfEdvI~~A~-~~~ 40 (111)
T 3pxi_a 23 VLRFGDFEDVISLSK-LNV 40 (111)
T ss_dssp EEEESSTHHHHHHHT-SCC
T ss_pred EEEcCCHHHHHHHHc-CCC
Confidence 799999999999999 543
No 33
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=35.02 E-value=21 Score=24.83 Aligned_cols=17 Identities=41% Similarity=0.640 Sum_probs=15.4
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
-|.|.|.+||-+|+++.
T Consensus 101 GLnF~se~eA~~F~~~v 117 (126)
T 2jp2_A 101 GLTFQSPADARAFDRGV 117 (126)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHH
Confidence 89999999999998763
No 34
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=34.08 E-value=33 Score=23.02 Aligned_cols=25 Identities=20% Similarity=0.442 Sum_probs=22.0
Q ss_pred eeecCCHHHHHHHHHHcCccEEEec
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
-+..++.++..+|++++|++|.+..
T Consensus 69 ~vs~d~~~~~~~~~~~~~~~~p~l~ 93 (157)
T 4g2e_A 69 GISVDPPFSNKAFKEHNKLNFTILS 93 (157)
T ss_dssp EEESSCHHHHHHHHHHTTCCSEEEE
T ss_pred eecccchhHHHHHHHHcCCcEEEEE
Confidence 4677999999999999999998865
No 35
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=33.60 E-value=45 Score=20.26 Aligned_cols=25 Identities=20% Similarity=0.101 Sum_probs=22.7
Q ss_pred eeecCCHHHHHHHHHHcCccEEEec
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
.+.....++-.++-+++|+.|+|.-
T Consensus 44 ~V~p~~~~~f~~~L~~~~i~~~v~i 68 (79)
T 1vjq_A 44 LIPSDMVEWFLEMLKAKGIPFTVYV 68 (79)
T ss_dssp EECGGGHHHHHHHHHHTTCCEEEEE
T ss_pred EECHHHHHHHHHHHHHCCCcEEEEe
Confidence 6788999999999999999999974
No 36
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=33.13 E-value=13 Score=25.00 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=23.2
Q ss_pred CCCccCCCCcccccCCceeecCCHHH-HHHHHHHcCccEEEecCCCC
Q 036052 48 LMGWTSTGDPYANVGDAGLSFDSEEA-AREFAERHGWEYVVRKPHRP 93 (115)
Q Consensus 48 LMGWtss~D~~~qv~~~~l~F~skE~-Ai~yaek~G~~y~V~~p~~~ 93 (115)
|-||.||.+.. +.. -.+||+++|..|.|..|.-+
T Consensus 8 lHGf~ss~~s~------------k~~~l~~~~~~~~~~~~v~~pdl~ 42 (202)
T 4fle_A 8 IHGFNSSPSSA------------KATTFKSWLQQHHPHIEMQIPQLP 42 (202)
T ss_dssp ECCTTCCTTCH------------HHHHHHHHHHHHCTTSEEECCCCC
T ss_pred eCCCCCCCCcc------------HHHHHHHHHHHcCCCcEEEEeCCC
Confidence 56898876531 111 23688999999999887654
No 37
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=32.77 E-value=20 Score=23.80 Aligned_cols=15 Identities=27% Similarity=0.333 Sum_probs=13.2
Q ss_pred ecCCHHHHHHHHHHc
Q 036052 67 SFDSEEAAREFAERH 81 (115)
Q Consensus 67 ~F~skE~Ai~yaek~ 81 (115)
.|+|.++||+.|+.+
T Consensus 114 i~~t~~~Al~~~~~~ 128 (135)
T 4dgf_A 114 VFDHIDKALAYAKLL 128 (135)
T ss_dssp BCSSHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHH
Confidence 699999999999863
No 38
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=32.74 E-value=33 Score=22.26 Aligned_cols=28 Identities=29% Similarity=0.429 Sum_probs=23.4
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecCCC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p~~ 92 (115)
.|-.=+.++|++-|++.|++.....|..
T Consensus 25 ~lGv~~~~eAl~~A~e~~LDLVevsp~a 52 (78)
T 1tif_A 25 QLGIKSKQEALEIAARRNLDLVLVAPNA 52 (78)
T ss_dssp EEEEEEHHHHHHHHHHTTCEEEEEETTS
T ss_pred CCCcccHHHHHHHHHHcCCCEEEECCCC
Confidence 3455688999999999999998888764
No 39
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=32.73 E-value=34 Score=22.43 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=22.8
Q ss_pred CCCCCccCCCC--cccccCCceeecCCHHHHHHHHHH
Q 036052 46 NPLMGWTSTGD--PYANVGDAGLSFDSEEAAREFAER 80 (115)
Q Consensus 46 ~PLMGWtss~D--~~~qv~~~~l~F~skE~Ai~yaek 80 (115)
..|-||+-..+ -+.. ..+|++-.+|++|..+
T Consensus 16 ~~l~gW~~~~~~~~l~r----~f~f~~f~~a~~f~~~ 48 (97)
T 3jst_A 16 RALDGWQKVDGREAITR----SFKFKDFSTAFGFMAQ 48 (97)
T ss_dssp HTSTTCEECTTSSCEEE----EEECSSHHHHHHHHHH
T ss_pred hcCCCCeEeCCCCeEEE----EEEeCCHHHHHHHHHH
Confidence 35789987744 3333 7899999999998655
No 40
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=32.22 E-value=41 Score=24.09 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=26.1
Q ss_pred CccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecC
Q 036052 50 GWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 50 GWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
.--++|||. .|++-..-++.|+++|++++|..-
T Consensus 98 ~~l~~GDP~--------i~~~~~~l~~~~~~~gi~v~viPG 130 (232)
T 2qbu_A 98 AFITLGDPS--------IYSTFSYLQQRIEDMGFKTEMVPG 130 (232)
T ss_dssp EEEESBCTT--------BSCSHHHHHHHHHHTTCCEEEECC
T ss_pred EEEeCCCCc--------cchhHHHHHHHHHHCCCcEEEeCC
Confidence 345568883 578888889999999999999753
No 41
>1mwp_A Amyloid A4 protein; heparin binding, sugar binding protein; 1.80A {Homo sapiens} SCOP: d.170.2.1
Probab=31.95 E-value=24 Score=23.95 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=18.5
Q ss_pred eeecCCHHHHHHHHHHcCccEEE
Q 036052 65 GLSFDSEEAAREFAERHGWEYVV 87 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V 87 (115)
.--|.++++.++||++.--+.+|
T Consensus 33 ~~C~~~k~eIL~YCrkvYP~l~I 55 (96)
T 1mwp_A 33 KTCIDTKEGILQYCQEVYPELQI 55 (96)
T ss_dssp CBCCCSHHHHHHHHHHHSTTSCE
T ss_pred ccccCChHHHHHHHHHHCCCCcc
Confidence 34788999999999998766654
No 42
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=31.69 E-value=66 Score=19.47 Aligned_cols=24 Identities=21% Similarity=0.129 Sum_probs=22.4
Q ss_pred eeecCCHHHHHHHHHHcCccEEEe
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVR 88 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~ 88 (115)
.+.....++-.++-+++|+.|+|.
T Consensus 52 ~V~p~~~~~f~~~L~~~~I~y~Vl 75 (78)
T 2gjf_A 52 LIPSDMVEWFLEMLKAKGIPFTVY 75 (78)
T ss_dssp EECTTSHHHHHHHHHHHTCCEEEE
T ss_pred EECHHHHHHHHHHHHHCCCcEEEE
Confidence 788999999999999999999996
No 43
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=31.50 E-value=18 Score=20.48 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=16.9
Q ss_pred eeecCCHHHHHHHHHHcCc
Q 036052 65 GLSFDSEEAAREFAERHGW 83 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~ 83 (115)
+|...+..+++.+|.++|+
T Consensus 40 kl~~~~~~~l~~~~~~~g~ 58 (61)
T 2jpc_A 40 KLQVHKVTELLNCARRMRL 58 (61)
T ss_dssp HHTCSSHHHHHHHHHCSCC
T ss_pred HHCCCCHHHHHHHHHHcCC
Confidence 5678899999999999997
No 44
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=30.70 E-value=26 Score=22.31 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=19.4
Q ss_pred eeecCCHHHHHHHHHH-----cCc--cEEEec
Q 036052 65 GLSFDSEEAAREFAER-----HGW--EYVVRK 89 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek-----~G~--~y~V~~ 89 (115)
-+.++|+|+|+++|++ +|+ .|+|.+
T Consensus 65 i~~a~s~eea~~~~~~dP~~~~G~~~~~eVrp 96 (101)
T 1mwq_A 65 IAQFENLQAAKDWAAQDPYVEAGVYADVIVKP 96 (101)
T ss_dssp EEECSSHHHHHHHHHTCHHHHTTCEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHhCChhhcCCcceEEEEE
Confidence 5789999999999975 464 577754
No 45
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=30.55 E-value=34 Score=22.08 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHcCccEEEec
Q 036052 69 DSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 69 ~skE~Ai~yaek~G~~y~V~~ 89 (115)
++.++..+|++++|+.|.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 78 MTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp SCHHHHHHHHHHTTCCSCEEE
T ss_pred CCHHHHHHHHHHcCCCceEEE
Confidence 599999999999999997654
No 46
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=30.40 E-value=42 Score=22.14 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=23.1
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
.+..++.++..+|++++|+.|.+...
T Consensus 68 ~vs~d~~~~~~~~~~~~~~~~~~~~d 93 (161)
T 3drn_A 68 GVSSDDINSHKRFKEKYKLPFILVSD 93 (161)
T ss_dssp EEESCCHHHHHHHHHHTTCCSEEEEC
T ss_pred EEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 56789999999999999999988764
No 47
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=29.65 E-value=13 Score=24.81 Aligned_cols=16 Identities=25% Similarity=0.059 Sum_probs=13.4
Q ss_pred eecCCHHHHHHHHHHc
Q 036052 66 LSFDSEEAAREFAERH 81 (115)
Q Consensus 66 l~F~skE~Ai~yaek~ 81 (115)
-.|+|.++||++|+.+
T Consensus 126 ~if~s~~~Al~~~~~~ 141 (143)
T 3llo_A 126 LLFHSIHDAVLGSQVR 141 (143)
T ss_dssp GEESSHHHHHHHTSSC
T ss_pred eEECcHHHHHHHHHhc
Confidence 3699999999998754
No 48
>2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A*
Probab=28.63 E-value=37 Score=22.58 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=24.1
Q ss_pred CCCCCccCCCCcccccCCceeecCCHHHHHHHHHH
Q 036052 46 NPLMGWTSTGDPYANVGDAGLSFDSEEAAREFAER 80 (115)
Q Consensus 46 ~PLMGWtss~D~~~qv~~~~l~F~skE~Ai~yaek 80 (115)
..|-||+-.+|+. .|. .+.+|.+-.+|++|..+
T Consensus 19 ~~l~gW~~~~~~~-~i~-r~f~F~~f~~a~~F~~~ 51 (104)
T 2v6u_A 19 KTVPQWHLTDGHL-SIK-RKFQFSDFNEAWGFMSR 51 (104)
T ss_dssp TTSTTSEECGGGC-CEE-EEEECSSHHHHHHHHHH
T ss_pred hcCCCCeEeCCcC-eEE-EEEEeCCHHHHHHHHHH
Confidence 4677998887742 232 37899999999988654
No 49
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=28.59 E-value=45 Score=24.64 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=26.1
Q ss_pred ccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCC
Q 036052 51 WTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPH 91 (115)
Q Consensus 51 Wtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~ 91 (115)
--++|||. .|++-..-++.|.+.|++++|..--
T Consensus 101 ~l~~GDP~--------~~~~~~~l~~~l~~~gi~v~viPGi 133 (259)
T 2e0n_A 101 VVSVGDGG--------FYSTASAIIERARRDGLDCSMTPGI 133 (259)
T ss_dssp EEESBCTT--------BSCTHHHHHHHHHTTTCCEEEECCC
T ss_pred EEeCCCCc--------ccccHHHHHHHHHHCCCCEEEeCCh
Confidence 44578883 5888888889999999999998543
No 50
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=28.51 E-value=27 Score=28.64 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=13.9
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
.+||+++||.++|..-
T Consensus 153 ~r~Ae~~g~k~evl~~ 168 (365)
T 1gqe_A 153 LRWAESRGFKTEIIEE 168 (365)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHCCCeEEEEec
Confidence 5799999999999764
No 51
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=27.97 E-value=43 Score=21.99 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=22.8
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
-+..++.++.-+|++++|+.|.+...
T Consensus 73 ~is~d~~~~~~~~~~~~~~~~~~l~D 98 (159)
T 2a4v_A 73 GLSADSVTSQKKFQSKQNLPYHLLSD 98 (159)
T ss_dssp EEESCCHHHHHHHHHHHTCSSEEEEC
T ss_pred EEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 67889999999999999999988654
No 52
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=27.72 E-value=50 Score=24.82 Aligned_cols=35 Identities=11% Similarity=-0.005 Sum_probs=26.6
Q ss_pred CccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCCC
Q 036052 50 GWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 50 GWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~~ 92 (115)
.--++|||. -|+.--.-++.|.+.|++++|..--.
T Consensus 80 a~L~~GDP~--------iyg~~~~l~~~l~~~gi~veviPGiS 114 (264)
T 3ndc_A 80 ARLHSGDLS--------IWSAMGEQLRRLRALNIPYDVTPGVP 114 (264)
T ss_dssp EEEESBCTT--------SSCSHHHHHHHHHHTTCCEEEECCCC
T ss_pred EEEeCCCCc--------cccHHHHHHHHHHhCCCCEEEeCCHH
Confidence 345678884 57777788889999999999985433
No 53
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=27.71 E-value=35 Score=25.89 Aligned_cols=20 Identities=25% Similarity=0.547 Sum_probs=16.8
Q ss_pred cCCHHHHHHHHHHcCccEEE
Q 036052 68 FDSEEAAREFAERHGWEYVV 87 (115)
Q Consensus 68 F~skE~Ai~yaek~G~~y~V 87 (115)
-..++++++||++||+++.-
T Consensus 175 mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 175 MAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp BCCHHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHcCCcEEE
Confidence 35689999999999998754
No 54
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=27.53 E-value=34 Score=28.58 Aligned_cols=22 Identities=9% Similarity=0.179 Sum_probs=19.9
Q ss_pred eeecCCHHHHHHHHHHcCccEE
Q 036052 65 GLSFDSEEAAREFAERHGWEYV 86 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~ 86 (115)
+..|...++.++||++||+...
T Consensus 242 ~~~f~~aD~~v~~A~~ngi~vr 263 (540)
T 2w5f_A 242 RVSLNRAASILNFCAQNNIAVR 263 (540)
T ss_dssp EECCTTTHHHHHHHHHTTCEEE
T ss_pred eechhHHHHHHHHHHHCCCEEE
Confidence 4789999999999999999974
No 55
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=27.33 E-value=35 Score=22.20 Aligned_cols=26 Identities=12% Similarity=0.316 Sum_probs=22.7
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
.+..++.++..+|++++|+.|.+...
T Consensus 75 ~is~d~~~~~~~~~~~~~~~~~~~~d 100 (160)
T 1xvw_A 75 AISVGPPPTHKIWATQSGFTFPLLSD 100 (160)
T ss_dssp EEESCCHHHHHHHHHHHTCCSCEEEC
T ss_pred EEeCCCHHHHHHHHHhcCCCceEEec
Confidence 66789999999999999999987654
No 56
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=27.31 E-value=56 Score=21.81 Aligned_cols=26 Identities=8% Similarity=-0.038 Sum_probs=22.4
Q ss_pred eeecCCHHHHHHHHHHcCc--cEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGW--EYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~--~y~V~~p 90 (115)
-+..++.++.-+|++++|+ .|.+...
T Consensus 76 ~Is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (162)
T 1tp9_A 76 CISVNDPFVMKAWAKSYPENKHVKFLAD 103 (162)
T ss_dssp EEESSCHHHHHHHHHTCTTCSSEEEEEC
T ss_pred EEECCCHHHHHHHHHhcCCCCCeEEEEC
Confidence 5678999999999999999 8987654
No 57
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=27.02 E-value=27 Score=26.87 Aligned_cols=20 Identities=20% Similarity=0.579 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHcCccEEEec
Q 036052 70 SEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 70 skE~Ai~yaek~G~~y~V~~ 89 (115)
|.+-=++||++||++..+..
T Consensus 25 siKNK~DYArrHGYelfy~d 44 (213)
T 2p6w_A 25 TKELVEEYCSIHGYNFYYEE 44 (213)
T ss_dssp HHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEee
Confidence 44555789999999999863
No 58
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=26.73 E-value=45 Score=22.11 Aligned_cols=26 Identities=15% Similarity=0.227 Sum_probs=22.1
Q ss_pred eeecCCHHHHHHHHHHcCc-cEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGW-EYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~-~y~V~~p 90 (115)
-+..++.++..+|++++|+ .|.+...
T Consensus 79 ~is~d~~~~~~~~~~~~~~~~~~~l~D 105 (163)
T 1psq_A 79 TVSMDLPFAQKRWCGAEGLDNAIMLSD 105 (163)
T ss_dssp EEESSCHHHHHHHHHHHTCTTSEEEEC
T ss_pred EEECCCHHHHHHHHHhcCCCCcEEecC
Confidence 5678999999999999999 8887654
No 59
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=26.71 E-value=51 Score=22.36 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=22.4
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
-+.-++.++.-+|++++|++|.+...
T Consensus 72 ~is~d~~~~~~~~~~~~~~~fp~l~D 97 (164)
T 4gqc_A 72 AISVDSPWCLKKFKDENRLAFNLLSD 97 (164)
T ss_dssp EEESSCHHHHHHHHHHTTCCSEEEEC
T ss_pred EecCCCHHHHHHHHHhcCcccceeec
Confidence 46779999999999999999988653
No 60
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=26.50 E-value=33 Score=30.74 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=20.1
Q ss_pred eecCCHHHHHHHHHHcCccEEEec
Q 036052 66 LSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 66 l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
+..++-..=|+||-++||+|.+.|
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLve 391 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVE 391 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEE
Confidence 456667788999999999999983
No 61
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=26.34 E-value=53 Score=21.44 Aligned_cols=25 Identities=16% Similarity=0.080 Sum_probs=19.4
Q ss_pred eeecC----CHHHHHHHHHHcCccEEEec
Q 036052 65 GLSFD----SEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 65 ~l~F~----skE~Ai~yaek~G~~y~V~~ 89 (115)
.+.+. ..++|++|.+++|+..+|..
T Consensus 68 ~v~l~G~~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 68 LTEMHGTQQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCEEEEee
Confidence 55553 35789999999999998864
No 62
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=26.30 E-value=37 Score=22.10 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=25.7
Q ss_pred CCCCCCccCCCCcccccCCceeecCCHHHHHHHHHHcCccEE
Q 036052 45 ENPLMGWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYV 86 (115)
Q Consensus 45 ~~PLMGWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~ 86 (115)
..|..||..-++---.+ .-.-.|-++|..+|+.+|=...
T Consensus 8 ~~~~~~~~~~~~~CY~~---~~~~~~w~~A~~~C~~~g~~La 46 (133)
T 2zib_A 8 LVCPAGWTLHGQRCFYS---EATAMTWDLAEANCVNKGGHLA 46 (133)
T ss_dssp CCCCTTCEEETTEEEEE---EEEEECHHHHHHHHHHTTSEEC
T ss_pred eeCCCCEEEeCCEEEEE---ECCccCHHHHHHHHHHCCCEEC
Confidence 36788888887743222 1122577899999999885443
No 63
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=26.10 E-value=37 Score=22.20 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=22.5
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
-+..++.++..+|++++|+.|.+...
T Consensus 74 ~vs~d~~~~~~~~~~~~~~~~~~~~d 99 (163)
T 3gkn_A 74 GVSRDSVKSHDNFCAKQGFAFPLVSD 99 (163)
T ss_dssp EEESSCHHHHHHHHHHHCCSSCEEEC
T ss_pred EEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 56789999999999999999987653
No 64
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=26.03 E-value=36 Score=25.03 Aligned_cols=17 Identities=47% Similarity=0.770 Sum_probs=15.1
Q ss_pred eeecCCHHHHHHHHHHc
Q 036052 65 GLSFDSEEAAREFAERH 81 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~ 81 (115)
-|.|.|+|||-+|++..
T Consensus 92 GLnF~Se~eA~~F~~~~ 108 (168)
T 1i2h_A 92 GLGFSSEHHLSKFAEKF 108 (168)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EeccCCHHHHHHHHHHH
Confidence 79999999999998754
No 65
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=25.53 E-value=46 Score=24.64 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=25.1
Q ss_pred ccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecC
Q 036052 51 WTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 51 Wtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
--++|||+ .|.+-..-++.|.++|++++|..-
T Consensus 82 ~l~~GDP~--------i~~~~~~l~~~l~~~gi~veviPG 113 (265)
T 2z6r_A 82 FLTPGDPL--------VATTHAELRIRAKRAGVESYVIHA 113 (265)
T ss_dssp EEESBCTT--------SSSSTHHHHHHHHHTTCCEEEECC
T ss_pred EEECCCCc--------CCCCHHHHHHHHHHCCCcEEEECC
Confidence 44578884 577777888899999999999753
No 66
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=25.49 E-value=30 Score=28.47 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=14.0
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
.+||+++||.++|..-
T Consensus 141 ~r~Ae~~g~k~evl~~ 156 (365)
T 2ihr_1 141 TRFAERQGFQVEVVDL 156 (365)
T ss_dssp HHHHHTTTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEec
Confidence 5899999999999863
No 67
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=25.30 E-value=56 Score=22.36 Aligned_cols=26 Identities=8% Similarity=0.158 Sum_probs=22.3
Q ss_pred eeecCCHHHHHHHHHHcCcc--EEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWE--YVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~--y~V~~p 90 (115)
-+..++.+++.+|++++|++ |.+...
T Consensus 72 ~Is~d~~~~~~~~~~~~~~~~~fp~l~D 99 (167)
T 2wfc_A 72 CMAVNDSFVMDAWGKAHGADDKVQMLAD 99 (167)
T ss_dssp EEESSCHHHHHHHHHHTTCTTTSEEEEC
T ss_pred EEeCCCHHHHHHHHHhcCCCcceEEEEC
Confidence 56789999999999999998 887654
No 68
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=24.89 E-value=31 Score=28.44 Aligned_cols=16 Identities=31% Similarity=0.910 Sum_probs=14.0
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
..||+++||.++|..-
T Consensus 150 ~r~Ae~~g~kvevl~~ 165 (371)
T 1zbt_A 150 QKYAENQGWKFEVMEA 165 (371)
T ss_dssp HHHHHHHTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEec
Confidence 5899999999999764
No 69
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=24.88 E-value=27 Score=20.39 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=15.5
Q ss_pred CCHHHHHHHHHHcCccEE
Q 036052 69 DSEEAAREFAERHGWEYV 86 (115)
Q Consensus 69 ~skE~Ai~yaek~G~~y~ 86 (115)
++.+.|+.|-+.++|+++
T Consensus 19 ~d~~~A~~~Lea~nWDLe 36 (45)
T 3e21_A 19 ENIDEAITLLEQNNWDLV 36 (45)
T ss_dssp CCHHHHHHHHHHTTTCHH
T ss_pred CCHHHHHHHHHHcCCcHH
Confidence 456999999999999875
No 70
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=24.88 E-value=31 Score=28.23 Aligned_cols=16 Identities=38% Similarity=0.468 Sum_probs=14.0
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
..||+++||.++|..-
T Consensus 132 ~r~ae~~g~k~ev~~~ 147 (354)
T 3d5a_X 132 LRFAEEMGFETEVLDS 147 (354)
T ss_dssp HHHHHHHTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEeC
Confidence 5899999999999764
No 71
>3tbi_A RNA polymerase-associated protein GP33; transcription accessory protein, transcription; 3.00A {Enterobacteria phage T4}
Probab=24.66 E-value=28 Score=24.46 Aligned_cols=15 Identities=27% Similarity=0.224 Sum_probs=13.3
Q ss_pred HHHHHHHHHHcCccE
Q 036052 71 EEAAREFAERHGWEY 85 (115)
Q Consensus 71 kE~Ai~yaek~G~~y 85 (115)
.|+++.|||.++|++
T Consensus 59 LEA~~~w~EEnsIe~ 73 (115)
T 3tbi_A 59 LEATTAFLEENSIPE 73 (115)
T ss_dssp HHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHcCCCH
Confidence 588999999999975
No 72
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=24.52 E-value=46 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.242 Sum_probs=17.6
Q ss_pred cCCHHHHHHHHHHcCccEEEe
Q 036052 68 FDSEEAAREFAERHGWEYVVR 88 (115)
Q Consensus 68 F~skE~Ai~yaek~G~~y~V~ 88 (115)
-..++++++||++||+++.-.
T Consensus 193 mar~~~l~~fA~~h~L~iitI 213 (233)
T 1k4i_A 193 MLRGDECVAFARRWGLKVCTI 213 (233)
T ss_dssp ECCHHHHHHHHHHTTCEEEEH
T ss_pred cCCHHHHHHHHHHcCCcEEEH
Confidence 457899999999999987544
No 73
>2hiq_A Hypothetical protein YDHR; hypothetical protein JW1657, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.58.4.12 PDB: 1wd6_A
Probab=24.13 E-value=34 Score=23.81 Aligned_cols=29 Identities=28% Similarity=0.518 Sum_probs=21.7
Q ss_pred ccCCCCcccccCCceeecCCHHHHHHHHHHc
Q 036052 51 WTSTGDPYANVGDAGLSFDSEEAAREFAERH 81 (115)
Q Consensus 51 Wtss~D~~~qv~~~~l~F~skE~Ai~yaek~ 81 (115)
||-+-|+.. .++ .--|+|+++|.+|.+.+
T Consensus 48 Wte~e~t~~-aGG-iYLFes~~~AeaY~~~h 76 (113)
T 2hiq_A 48 WTESEKNHE-AGG-IYLFTDEKSALAYLEKH 76 (113)
T ss_dssp EEEETTTTE-EEE-EEEESSHHHHHHHHHHH
T ss_pred EEEcCCCCe-eeE-EEEeCCHHHHHHHHHHH
Confidence 777777632 233 56799999999999876
No 74
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.96 E-value=39 Score=25.64 Aligned_cols=20 Identities=15% Similarity=0.358 Sum_probs=16.6
Q ss_pred cCCHHHHHHHHHHcCccEEE
Q 036052 68 FDSEEAAREFAERHGWEYVV 87 (115)
Q Consensus 68 F~skE~Ai~yaek~G~~y~V 87 (115)
-..++++++||++||+++.-
T Consensus 175 mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 175 MMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp BCBHHHHHHHHHHHTCCEEE
T ss_pred cCCHHHHHHHHHHcCCcEEE
Confidence 35689999999999998754
No 75
>2ek1_A RNA-binding protein 12; RNA recognition motif, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} PDB: 2ek6_A
Probab=23.87 E-value=62 Score=19.37 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=16.7
Q ss_pred eeecCCHHHHHHHHHH-cCccE
Q 036052 65 GLSFDSEEAAREFAER-HGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek-~G~~y 85 (115)
-+.|.+.|+|.+-.+. +|..+
T Consensus 61 fV~f~~~~~a~~Ai~~l~g~~~ 82 (95)
T 2ek1_A 61 MVAFESRDEATAAVIDLNDRPI 82 (95)
T ss_dssp EEEESSHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHhCCCeE
Confidence 6799999999988874 76543
No 76
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.61 E-value=61 Score=19.70 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=20.0
Q ss_pred ecCCHHHHHHHHHHcCccEEEecC
Q 036052 67 SFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 67 ~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
.+.+.+++.+++++.|+++.|-..
T Consensus 30 ~~~~~~~~~~~~~~~~~P~vvKp~ 53 (108)
T 2cqy_A 30 VVKDAEEAVRIAREIGYPVMIKAS 53 (108)
T ss_dssp CBSSHHHHHHHHHHHCSSEEEEET
T ss_pred ccCCHHHHHHHHHhcCCCEEEEEC
Confidence 567899999999999999877543
No 77
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A
Probab=23.51 E-value=34 Score=27.87 Aligned_cols=16 Identities=38% Similarity=0.787 Sum_probs=14.0
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
.+||+++||.++|..-
T Consensus 113 ~r~ae~~g~kvevl~~ 128 (342)
T 1rq0_A 113 TRYAERKGWNLEVAEI 128 (342)
T ss_dssp HHHHHHHTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEec
Confidence 5899999999999763
No 78
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=23.37 E-value=58 Score=24.15 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=26.9
Q ss_pred CccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCCC
Q 036052 50 GWTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 50 GWtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~~ 92 (115)
..-++|||. -|+.--.-++.|.+.|++++|..--.
T Consensus 81 ~~l~~GDP~--------i~~~~~~l~~~l~~~gi~veviPGiS 115 (253)
T 4e16_A 81 VRLQTGDFS--------IYGSIREQVEDLNKLNIDYDCTPGVS 115 (253)
T ss_dssp EEEESBCTT--------TTCCHHHHHHHHHHHTCCEEEECCCC
T ss_pred EEEeCCCCc--------cccCHHHHHHHHHHCCCCEEEECCHH
Confidence 455678884 57777778889999999999986443
No 79
>4a56_A PULS, pullulanase secretion protein PULS; protein transport, T2SS; 1.24A {Klebsiella oxytoca}
Probab=23.22 E-value=33 Score=23.06 Aligned_cols=13 Identities=31% Similarity=0.713 Sum_probs=12.0
Q ss_pred HHHHHHHHcCccE
Q 036052 73 AAREFAERHGWEY 85 (115)
Q Consensus 73 ~Ai~yaek~G~~y 85 (115)
.||.||+++||+-
T Consensus 38 ~a~~~A~~~~Wd~ 50 (93)
T 4a56_A 38 AAINVGKKRGWAN 50 (93)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHHcCCCh
Confidence 7999999999986
No 80
>3sol_A Type II secretion pathway related protein; general secretory pathway, protein transport, pilotin; 1.90A {Escherichia coli}
Probab=23.03 E-value=38 Score=22.78 Aligned_cols=14 Identities=29% Similarity=0.617 Sum_probs=12.3
Q ss_pred HHHHHHHHcCccEE
Q 036052 73 AAREFAERHGWEYV 86 (115)
Q Consensus 73 ~Ai~yaek~G~~y~ 86 (115)
.||.||+++||+-.
T Consensus 38 ~a~~~A~~~gWD~~ 51 (94)
T 3sol_A 38 VANRIAIGKGWQSL 51 (94)
T ss_dssp HHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCChh
Confidence 79999999999853
No 81
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=22.51 E-value=65 Score=21.38 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=22.6
Q ss_pred eeecCCHHHHHHHHHHcCc-cEEEecCC
Q 036052 65 GLSFDSEEAAREFAERHGW-EYVVRKPH 91 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~-~y~V~~p~ 91 (115)
-+..++.++..+||+++|+ .|.+....
T Consensus 82 ~is~d~~~~~~~~~~~~~~~~~~~l~D~ 109 (166)
T 3p7x_A 82 TISADLPFAQKRWCASAGLDNVITLSDH 109 (166)
T ss_dssp EEESSCHHHHHHHHHHHTCSSCEEEECT
T ss_pred EEECCCHHHHHHHHHHcCCCceEEccCC
Confidence 5678999999999999999 88876533
No 82
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=22.45 E-value=81 Score=22.84 Aligned_cols=30 Identities=30% Similarity=0.345 Sum_probs=24.3
Q ss_pred cCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEec
Q 036052 52 TSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 52 tss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
-.+|||. .|++--.-+++|.++|++++|..
T Consensus 81 l~~GDP~--------i~~~~~~l~~~l~~~gi~v~viP 110 (239)
T 1va0_A 81 LKGGDPM--------VFGRGGEEVLFLLRHGVPVEVVP 110 (239)
T ss_dssp EESBCTT--------SSSSHHHHHHHHHHTTCCEEEEC
T ss_pred EeCCCCc--------cccCHHHHHHHHHHCCCcEEEEC
Confidence 3567773 57888888899999999999975
No 83
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=22.24 E-value=43 Score=29.34 Aligned_cols=24 Identities=29% Similarity=0.426 Sum_probs=20.8
Q ss_pred eecCCHHHHHHHHHHcCccEEEec
Q 036052 66 LSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 66 l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
+..++-..=|+||.++||+|.+..
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD 329 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILD 329 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 467778889999999999999974
No 84
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=22.16 E-value=63 Score=24.37 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=25.7
Q ss_pred ccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCCC
Q 036052 51 WTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 51 Wtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~~ 92 (115)
--++|||+ .|++--.-+++|+++|++++|..--.
T Consensus 97 ~L~~GDP~--------i~g~g~~l~~~l~~~gi~veviPGiS 130 (280)
T 1s4d_A 97 RLKGGDPF--------VFGRGGEEALTLVEHQVPFRIVPGIT 130 (280)
T ss_dssp EEESBCTT--------SSSSHHHHHHHHHTTTCCEEEECCCC
T ss_pred EEcCCCCc--------cccCHHHHHHHHHHCCCCEEEEcCcc
Confidence 34457773 57777788899999999999986443
No 85
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=22.07 E-value=72 Score=18.63 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=16.8
Q ss_pred ceeecCCHHHHHHHHHH-cCcc
Q 036052 64 AGLSFDSEEAAREFAER-HGWE 84 (115)
Q Consensus 64 ~~l~F~skE~Ai~yaek-~G~~ 84 (115)
+-+.|.+.|+|.+-++. +|..
T Consensus 50 afV~f~~~~~a~~A~~~l~g~~ 71 (88)
T 4a8x_A 50 AYVEFENPDEAEKALKHMDGGQ 71 (88)
T ss_dssp EEEEESSHHHHHHHHHHHTTCE
T ss_pred EEEEEecHHHHHHHHHHcCCCe
Confidence 36799999999988875 6654
No 86
>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1
Probab=22.01 E-value=29 Score=28.43 Aligned_cols=16 Identities=19% Similarity=0.495 Sum_probs=13.8
Q ss_pred HHHHHHcCccEEEecC
Q 036052 75 REFAERHGWEYVVRKP 90 (115)
Q Consensus 75 i~yaek~G~~y~V~~p 90 (115)
.+||+++||.++|..-
T Consensus 136 ~r~ae~~g~k~ev~~~ 151 (360)
T 2b3t_B 136 SRYAEARRWRVEIMSA 151 (360)
T ss_dssp HHHHHHTTCCCCEEEE
T ss_pred HHHHHHcCCeEEEEec
Confidence 5799999999999763
No 87
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=21.67 E-value=75 Score=20.48 Aligned_cols=24 Identities=8% Similarity=-0.233 Sum_probs=19.3
Q ss_pred eeecCC-----HHHHHHHHHHcCccEEEe
Q 036052 65 GLSFDS-----EEAAREFAERHGWEYVVR 88 (115)
Q Consensus 65 ~l~F~s-----kE~Ai~yaek~G~~y~V~ 88 (115)
.|.+.- .++|++|.+++|+..+|.
T Consensus 67 ~v~l~G~~~~~~~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 67 VLHIPYISSVDFGKFEKELIERQVKMEVL 95 (98)
T ss_dssp EEEESCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 566653 578999999999999886
No 88
>1t0f_A Transposon TN7 transposition protein TNSA; protein-protein complex, mixed alpha-beta, DNA binding protein; 1.85A {Escherichia coli} SCOP: a.4.5.27 c.52.1.16 PDB: 1f1z_A
Probab=21.47 E-value=55 Score=25.03 Aligned_cols=22 Identities=9% Similarity=0.172 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCccEEEecCCC
Q 036052 71 EEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 71 kE~Ai~yaek~G~~y~V~~p~~ 92 (115)
.|.+-.||+++||+|.|...+.
T Consensus 149 ~eier~y~~~~Gi~~~IvTe~e 170 (276)
T 1t0f_A 149 LELERRYWQQKQIPWFIFTDKE 170 (276)
T ss_dssp HHHHHHHHHHHTCCEEEECGGG
T ss_pred HHHHHHHHHHcCCEEEEECccc
Confidence 4667899999999999986543
No 89
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=21.42 E-value=74 Score=24.14 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=25.8
Q ss_pred ccCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCC
Q 036052 51 WTSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPH 91 (115)
Q Consensus 51 Wtss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~ 91 (115)
--++|||+ -|.+--.=+..|.++|++++|..--
T Consensus 88 ~L~~GDP~--------v~g~~~~l~~~l~~~gi~veviPGi 120 (294)
T 1wde_A 88 VVTAGDPM--------VATTHSSLAAEALEAGVAVRYIPGV 120 (294)
T ss_dssp EEESBCTT--------SSSSHHHHHHHHHHTTCEEEEECCC
T ss_pred EEeCCCCc--------cccCHHHHHHHHHHCCCCEEEECCH
Confidence 44578884 5788777889999999999998543
No 90
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=21.02 E-value=81 Score=18.23 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=16.8
Q ss_pred eeecCCHHHHHHHHHH-cCccE
Q 036052 65 GLSFDSEEAAREFAER-HGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek-~G~~y 85 (115)
-+.|.+.|+|.+-.+. +|..+
T Consensus 47 fV~f~~~~~a~~a~~~l~g~~~ 68 (83)
T 3md1_A 47 FVSFTSQDDAQNAMDSMQGQDL 68 (83)
T ss_dssp EEEESCHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHhcCCee
Confidence 6799999999988875 66643
No 91
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=21.02 E-value=65 Score=20.66 Aligned_cols=25 Identities=16% Similarity=0.465 Sum_probs=22.0
Q ss_pred eeecCCHHHHHHHHHHcCccEEEec
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
.+..++.++..+|++++|+.|.+..
T Consensus 62 ~v~~d~~~~~~~~~~~~~~~~~~~~ 86 (151)
T 3raz_A 62 GIALDTSDNIGNFLKQTPVSYPIWR 86 (151)
T ss_dssp EEESSCHHHHHHHHHHSCCSSCEEE
T ss_pred EEECCChHHHHHHHHHcCCCCceEe
Confidence 6778999999999999999987754
No 92
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=21.01 E-value=73 Score=20.36 Aligned_cols=24 Identities=17% Similarity=0.081 Sum_probs=19.0
Q ss_pred eeecC----CHHHHHHHHHHcCccEEEe
Q 036052 65 GLSFD----SEEAAREFAERHGWEYVVR 88 (115)
Q Consensus 65 ~l~F~----skE~Ai~yaek~G~~y~V~ 88 (115)
.+.+. ..++|++|.+++|+..+|.
T Consensus 70 ~v~l~G~~~~~~~ai~~L~~~~v~vEvl 97 (101)
T 2qrr_A 70 VAELFGNEQDDSAAIEYLRENNVKVEVL 97 (101)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCEEEEe
Confidence 55554 3578999999999999886
No 93
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=20.73 E-value=44 Score=21.88 Aligned_cols=14 Identities=14% Similarity=0.162 Sum_probs=12.2
Q ss_pred HHHHHHHHHHcCcc
Q 036052 71 EEAAREFAERHGWE 84 (115)
Q Consensus 71 kE~Ai~yaek~G~~ 84 (115)
-+.|-+||++|+++
T Consensus 42 ~~aAqkFi~~n~Lp 55 (80)
T 2k89_A 42 WLTAYNFLQKNDLN 55 (80)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 46899999999986
No 94
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=20.67 E-value=48 Score=26.59 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=22.9
Q ss_pred eeecCCHHHHHHHHHHcCccEEEecC
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRKP 90 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~p 90 (115)
+..|...+..|+||++||+......+
T Consensus 72 ~~~f~~~D~~v~~a~~~gi~vrghtl 97 (379)
T 1r85_A 72 KFNFEQADRIVKFAKANGMDIRFHTL 97 (379)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred ccCchhHHHHHHHHHHCCCEEEEecc
Confidence 57899999999999999999876654
No 95
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=20.60 E-value=38 Score=26.35 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=21.0
Q ss_pred eeecCCHHHHHHHHHHcCccEEEe
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVR 88 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~ 88 (115)
+..|...+..++||++||+.....
T Consensus 58 ~~~f~~~D~~v~~a~~~gi~v~gh 81 (313)
T 1v0l_A 58 QFNFSSADRVYNWAVQNGKQVRGH 81 (313)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCchHHHHHHHHHHHCCCEEEEE
Confidence 578999999999999999997543
No 96
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=20.31 E-value=43 Score=25.87 Aligned_cols=25 Identities=8% Similarity=0.197 Sum_probs=21.5
Q ss_pred eeecCCHHHHHHHHHHcCccEEEec
Q 036052 65 GLSFDSEEAAREFAERHGWEYVVRK 89 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V~~ 89 (115)
+..|...++.|+||++||+......
T Consensus 59 ~~~f~~~D~~v~~a~~~gi~v~ght 83 (303)
T 1ta3_B 59 NFGWSGADYLVDYATQHNKKVRGHT 83 (303)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCchHHHHHHHHHHHCCCEEEEee
Confidence 5689999999999999999986543
No 97
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=20.26 E-value=79 Score=19.38 Aligned_cols=21 Identities=14% Similarity=0.286 Sum_probs=16.7
Q ss_pred eeecCCHHHHHHHHHH-cCccE
Q 036052 65 GLSFDSEEAAREFAER-HGWEY 85 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek-~G~~y 85 (115)
-+.|.+.|+|.+-.+. +|..+
T Consensus 74 fV~f~~~~~a~~A~~~l~g~~~ 95 (107)
T 3ulh_A 74 DVHFERKADALKAMKQYNGVPL 95 (107)
T ss_dssp EEEESSHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHhCCCEe
Confidence 6789999999988875 77543
No 98
>3ktm_A Amyloid beta A4 protein; protein structure, alzheimer disease, amyloidosis, apoptosis, cell adhesion, copper, disease mutation, disulfi endocytosis; 2.70A {Homo sapiens} PDB: 1owt_A 2fkl_A
Probab=20.24 E-value=47 Score=25.13 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=18.7
Q ss_pred eeecCCHHHHHHHHHHcCccEEE
Q 036052 65 GLSFDSEEAAREFAERHGWEYVV 87 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~V 87 (115)
+--|.++++.++||++.--+.+|
T Consensus 44 ~~C~~~k~eIL~YCrkvYPel~I 66 (191)
T 3ktm_A 44 KTCIDTKEGILQYCQEVYPELQI 66 (191)
T ss_dssp CBCCCSHHHHHHHHHHHCTTSCE
T ss_pred cccccChHHHHHHHHHHCCCccc
Confidence 55789999999999998665544
No 99
>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A
Probab=20.20 E-value=48 Score=20.27 Aligned_cols=19 Identities=11% Similarity=0.144 Sum_probs=16.4
Q ss_pred eeecCCHHHHHHHHHHcCc
Q 036052 65 GLSFDSEEAAREFAERHGW 83 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~ 83 (115)
+|.-.+..+++.+|.++||
T Consensus 63 kL~~~~~~~l~~~a~~~gl 81 (82)
T 1je8_A 63 KMKLKSRVEAAVWVHQERI 81 (82)
T ss_dssp HTTCSSHHHHHHHHHHTTC
T ss_pred HHcCCCHHHHHHHHHHcCC
Confidence 4667789999999999997
No 100
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=20.19 E-value=84 Score=18.35 Aligned_cols=20 Identities=20% Similarity=0.016 Sum_probs=16.0
Q ss_pred eeecCCHHHHHHHHHH-cCcc
Q 036052 65 GLSFDSEEAAREFAER-HGWE 84 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek-~G~~ 84 (115)
-+.|.|.|+|.+-.+. +|..
T Consensus 52 fV~f~~~~~A~~A~~~l~g~~ 72 (87)
T 3bs9_A 52 FVSFFNKWDAENAIQQMGGQW 72 (87)
T ss_dssp EEEESSHHHHHHHHHHHTTCE
T ss_pred EEEECCHHHHHHHHHHcCCCE
Confidence 5799999999988875 6643
No 101
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=20.15 E-value=86 Score=22.61 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=25.3
Q ss_pred cCCCCcccccCCceeecCCHHHHHHHHHHcCccEEEecCCC
Q 036052 52 TSTGDPYANVGDAGLSFDSEEAAREFAERHGWEYVVRKPHR 92 (115)
Q Consensus 52 tss~D~~~qv~~~~l~F~skE~Ai~yaek~G~~y~V~~p~~ 92 (115)
-.+|||. -|++--.-++.|+++|++++|..--.
T Consensus 84 l~~GDP~--------i~~~~~~l~~~l~~~gi~v~viPGiS 116 (235)
T 1ve2_A 84 LKGGDPM--------VFGRGGEEALALRRAGIPFEVVPGVT 116 (235)
T ss_dssp EESBCTT--------SSTTHHHHHHHHHHHTCCEEEECCCC
T ss_pred EcCCCCC--------cccCHHHHHHHHHHCCCCEEEECCHh
Confidence 3567773 57888888888999999999986433
No 102
>2cpe_A RNA-binding protein EWS; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.08 E-value=84 Score=19.51 Aligned_cols=22 Identities=23% Similarity=0.447 Sum_probs=17.2
Q ss_pred ceeecCCHHHHHHHHHH-cCccE
Q 036052 64 AGLSFDSEEAAREFAER-HGWEY 85 (115)
Q Consensus 64 ~~l~F~skE~Ai~yaek-~G~~y 85 (115)
+-+.|.+.|+|.+-.+. +|..+
T Consensus 68 afV~f~~~~~A~~Ai~~l~g~~~ 90 (113)
T 2cpe_A 68 ATVSYEDPPTAKAAVEWFDGKDF 90 (113)
T ss_dssp EEEEBSSHHHHHHHHHHHTTCEE
T ss_pred EEEEECCHHHHHHHHHHcCCCcc
Confidence 36899999999998875 66543
No 103
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A
Probab=20.02 E-value=39 Score=26.86 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=20.0
Q ss_pred eeecCCHHHHHHHHHHcCccEE
Q 036052 65 GLSFDSEEAAREFAERHGWEYV 86 (115)
Q Consensus 65 ~l~F~skE~Ai~yaek~G~~y~ 86 (115)
+..|...+..++||++||+...
T Consensus 58 ~~~f~~aD~~v~~a~~ngi~vr 79 (341)
T 3ro8_A 58 NFTFTAADAMIDKVLAEGMKMH 79 (341)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEE
T ss_pred ccchHHHHHHHHHHHhCCCEEE
Confidence 5689999999999999999875
Done!