Query 036053
Match_columns 184
No_of_seqs 117 out of 1436
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 08:56:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036053.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036053hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 7.3E-36 1.6E-40 245.7 15.5 101 82-183 306-459 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 2.3E-34 4.9E-39 238.6 17.4 177 1-183 132-451 (489)
3 PLN03234 cytochrome P450 83B1; 100.0 4.7E-34 1E-38 239.0 17.9 179 1-183 133-457 (499)
4 KOG0157 Cytochrome P450 CYP4/C 100.0 3.1E-33 6.7E-38 233.8 16.9 177 2-183 140-459 (497)
5 PTZ00404 cytochrome P450; Prov 100.0 9.2E-33 2E-37 230.3 16.5 97 82-183 295-445 (482)
6 PLN02966 cytochrome P450 83A1 100.0 1.9E-32 4.1E-37 229.5 17.6 179 1-183 134-458 (502)
7 PLN02183 ferulate 5-hydroxylas 100.0 2.5E-32 5.3E-37 229.5 17.7 102 82-183 316-470 (516)
8 PLN02971 tryptophan N-hydroxyl 100.0 4.7E-32 1E-36 229.1 18.4 102 82-183 339-495 (543)
9 PLN00110 flavonoid 3',5'-hydro 100.0 7.6E-32 1.6E-36 226.0 18.8 179 1-183 135-458 (504)
10 PLN03195 fatty acid omega-hydr 100.0 3.7E-32 8E-37 228.5 16.7 178 2-183 134-479 (516)
11 PLN02169 fatty acid (omega-1)- 100.0 3.3E-32 7.1E-37 228.0 16.1 133 51-183 244-463 (500)
12 PF00067 p450: Cytochrome P450 100.0 3.8E-32 8.3E-37 222.3 15.7 176 3-183 107-428 (463)
13 PLN02738 carotene beta-ring hy 100.0 9.2E-32 2E-36 230.0 18.2 178 1-183 232-557 (633)
14 PLN02394 trans-cinnamate 4-mon 100.0 7.5E-32 1.6E-36 225.9 17.2 102 82-183 305-461 (503)
15 PLN00168 Cytochrome P450; Prov 100.0 9E-32 2E-36 226.3 17.6 179 1-183 142-478 (519)
16 PLN02687 flavonoid 3'-monooxyg 100.0 1.3E-31 2.9E-36 225.2 18.3 178 1-183 138-467 (517)
17 PLN02500 cytochrome P450 90B1 100.0 9.4E-32 2E-36 224.7 17.1 135 49-183 229-455 (490)
18 PLN02426 cytochrome P450, fami 100.0 1.9E-31 4.2E-36 223.4 17.9 132 51-182 251-460 (502)
19 PLN02290 cytokinin trans-hydro 100.0 1.5E-31 3.1E-36 224.8 17.1 176 1-183 162-478 (516)
20 PLN03112 cytochrome P450 famil 100.0 3E-31 6.5E-36 222.8 18.0 179 1-183 136-466 (514)
21 KOG0159 Cytochrome P450 CYP11/ 100.0 4.1E-31 8.9E-36 214.9 15.4 180 1-182 161-480 (519)
22 PLN02774 brassinosteroid-6-oxi 100.0 1E-30 2.2E-35 217.2 16.2 133 48-183 215-429 (463)
23 PLN02655 ent-kaurene oxidase 100.0 2.7E-30 5.8E-35 214.8 17.1 100 82-183 274-426 (466)
24 PLN02196 abscisic acid 8'-hydr 100.0 1.6E-30 3.5E-35 216.0 15.6 172 1-183 136-427 (463)
25 PLN02936 epsilon-ring hydroxyl 100.0 3.8E-30 8.2E-35 215.1 17.2 101 82-183 290-445 (489)
26 PLN02302 ent-kaurenoic acid ox 100.0 2.5E-29 5.4E-34 209.9 17.8 172 3-183 151-452 (490)
27 PLN03141 3-epi-6-deoxocathaste 100.0 3.6E-29 7.8E-34 207.3 17.3 131 49-183 197-416 (452)
28 PLN03018 homomethionine N-hydr 100.0 6.2E-29 1.3E-33 209.6 18.3 102 82-183 326-485 (534)
29 COG2124 CypX Cytochrome P450 [ 100.0 8.3E-29 1.8E-33 202.9 12.2 167 1-182 109-374 (411)
30 KOG0684 Cytochrome P450 [Secon 100.0 3.6E-27 7.8E-32 188.5 14.7 137 46-182 221-446 (486)
31 PLN02987 Cytochrome P450, fami 99.9 1E-26 2.2E-31 193.6 14.4 136 47-183 216-434 (472)
32 PLN02648 allene oxide synthase 99.9 1.5E-23 3.4E-28 174.5 13.6 99 82-183 284-449 (480)
33 PF08492 SRP72: SRP72 RNA-bind 71.7 2.9 6.4E-05 24.7 1.5 9 138-146 43-51 (59)
34 PF05952 ComX: Bacillus compet 63.6 8.2 0.00018 22.6 2.3 20 91-110 3-22 (57)
35 COG2101 SPT15 TATA-box binding 57.8 3.5 7.5E-05 30.0 0.1 35 137-171 36-70 (185)
36 KOG3506 40S ribosomal protein 56.4 5.1 0.00011 23.1 0.6 11 158-168 12-22 (56)
37 PF08285 DPM3: Dolichol-phosph 51.6 24 0.00051 22.8 3.2 29 87-115 53-81 (91)
38 cd04518 TBP_archaea archaeal T 46.3 5 0.00011 29.3 -0.7 35 136-170 29-63 (174)
39 PF14483 Cut8_M: Cut8 dimerisa 40.9 56 0.0012 17.3 3.1 21 89-109 14-35 (38)
40 PRK00394 transcription factor; 37.4 9.2 0.0002 28.0 -0.4 34 136-169 28-61 (179)
41 PF14129 DUF4296: Domain of un 37.1 1E+02 0.0022 19.4 4.4 34 82-115 45-78 (87)
42 PRK13467 F0F1 ATP synthase sub 35.1 69 0.0015 19.4 3.2 23 88-110 21-43 (66)
43 PLN00062 TATA-box-binding prot 34.6 8.7 0.00019 28.1 -0.9 35 136-170 29-63 (179)
44 PF07849 DUF1641: Protein of u 33.6 55 0.0012 17.7 2.4 19 90-108 12-30 (42)
45 PF12554 MOZART1: Mitotic-spin 33.5 62 0.0014 18.2 2.6 31 82-112 18-48 (48)
46 cd00652 TBP_TLF TATA box bindi 32.9 10 0.00022 27.6 -0.8 34 136-169 29-62 (174)
47 PTZ00218 40S ribosomal protein 32.9 20 0.00043 20.7 0.5 15 159-173 11-27 (54)
48 PF11227 DUF3025: Protein of u 31.8 29 0.00062 26.2 1.4 19 124-142 193-211 (212)
49 PF14824 Sirohm_synth_M: Siroh 30.8 73 0.0016 16.0 2.3 15 100-114 15-29 (30)
50 TIGR01260 ATP_synt_c ATP synth 30.0 83 0.0018 18.4 2.9 22 88-109 11-32 (58)
51 PF07818 HCNGP: HCNGP-like pro 29.3 78 0.0017 20.6 3.0 11 99-109 41-51 (96)
52 cd04516 TBP_eukaryotes eukaryo 28.0 13 0.00029 27.0 -0.9 34 136-169 29-62 (174)
53 PRK13466 F0F1 ATP synthase sub 26.7 1.1E+02 0.0023 18.5 3.0 23 88-110 21-43 (66)
54 PF13040 DUF3901: Protein of u 26.0 1E+02 0.0022 16.6 2.6 20 95-114 17-36 (40)
55 COG0794 GutQ Predicted sugar p 25.0 25 0.00055 26.3 0.1 25 155-179 40-64 (202)
56 PF04798 Baculo_19: Baculoviru 24.4 19 0.0004 25.4 -0.6 18 155-173 58-75 (146)
57 PF10264 Stork_head: Winged he 24.4 1.8E+02 0.0039 18.3 3.8 36 87-122 13-50 (80)
58 PRK05880 F0F1 ATP synthase sub 24.1 1.3E+02 0.0027 19.0 3.1 24 87-110 29-52 (81)
59 KOG3392 Exon-exon junction com 23.4 85 0.0019 21.2 2.3 30 105-138 55-84 (147)
60 PF07886 BA14K: BA14K-like pro 23.0 82 0.0018 15.9 1.7 15 154-168 17-31 (31)
61 PF00352 TBP: Transcription fa 22.5 8.9 0.00019 24.2 -2.4 34 137-170 32-65 (86)
62 KOG3302 TATA-box binding prote 22.5 26 0.00056 26.0 -0.2 34 136-169 50-83 (200)
63 TIGR03272 methan_mark_6 putati 22.3 98 0.0021 21.4 2.5 19 160-180 77-95 (132)
64 PRK07558 F0F1 ATP synthase sub 21.2 1.5E+02 0.0032 18.3 3.0 22 88-109 27-48 (74)
65 PRK06876 F0F1 ATP synthase sub 21.1 1.6E+02 0.0034 18.4 3.1 22 89-110 30-51 (78)
66 PRK13990 cell division topolog 20.8 1E+02 0.0022 19.9 2.3 18 100-117 41-58 (90)
67 PF11460 DUF3007: Protein of u 20.7 2.7E+02 0.0058 18.5 5.4 41 46-112 63-103 (104)
68 MTH00222 ATP9 ATP synthase F0 20.1 1.8E+02 0.0039 18.1 3.2 23 88-110 29-51 (77)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.3e-36 Score=245.69 Aligned_cols=101 Identities=27% Similarity=0.421 Sum_probs=89.9
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|.||||++|++++|+||+||++|+|||+||+++......++.
T Consensus 306 GfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~ 385 (499)
T KOG0158|consen 306 GFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPG 385 (499)
T ss_pred hhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCC
Confidence 999999999999999999999999999999999654432332
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++||||++|+||||++++.. ...+..|+|||.|||.|+|+.||.+|+|+.|+.
T Consensus 386 ~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 386 GFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred CeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999977644 345778999999999999999999999999863
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-34 Score=238.55 Aligned_cols=177 Identities=34% Similarity=0.499 Sum_probs=142.2
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
+|+...++.+.....+++ ++++.+ .. .+.+||+.+.+..+
T Consensus 132 L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~----~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~ 206 (489)
T KOG0156|consen 132 LRSFGRGKSFMEIREEEVDELVKKLSK-SK----KGEPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEES 206 (489)
T ss_pred hcChhhhhhhHHHHHHHHHHHHHHHHh-cC----CCceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHH
Confidence 477888888888777777 666666 22 23788888777766
Q ss_pred -------------C-----------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c--CCC--C----------------Cc
Q 036053 46 -------------G-----------SRKRMTVYFLRMFKIFDGIIDERLQVK-E--SLM--N----------------SE 80 (184)
Q Consensus 46 -------------~-----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~--~~~--D----------------~~ 80 (184)
+ ..++......++.+++.++|++|++.. . +.+ | ++
T Consensus 207 ~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~~~~~t~~~ 286 (489)
T KOG0156|consen 207 LELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEGRDFVDALLKLMKEEKAEGLTDDH 286 (489)
T ss_pred HHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccccCCCCHHH
Confidence 1 334455556679999999999997742 1 111 1 12
Q ss_pred c----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc---------------------------
Q 036053 81 V----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR--------------------------- 123 (184)
Q Consensus 81 i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~--------------------------- 123 (184)
| |.|||++|+.|++.+|++||++|+|+|+||++++|.++.+++
T Consensus 287 i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ 366 (489)
T KOG0156|consen 287 LKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLL 366 (489)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccc
Confidence 2 999999999999999999999999999999999998775543
Q ss_pred --------------------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHH
Q 036053 124 --------------------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMA 177 (184)
Q Consensus 124 --------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~ 177 (184)
++||||++|+||++|+||||++++ +.+.....++|||.|+|+|||..+|++++
T Consensus 367 ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l 445 (489)
T KOG0156|consen 367 PRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAEL 445 (489)
T ss_pred cccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHH
Confidence 999999999999999999999885 33445778999999999999999999999
Q ss_pred HHhhcc
Q 036053 178 HLMLTF 183 (184)
Q Consensus 178 ~~~la~ 183 (184)
.+++|+
T Consensus 446 ~l~la~ 451 (489)
T KOG0156|consen 446 FLFLAN 451 (489)
T ss_pred HHHHHH
Confidence 999874
No 3
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=4.7e-34 Score=239.01 Aligned_cols=179 Identities=26% Similarity=0.538 Sum_probs=139.9
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
+|+++++..+.+.+++++ ++++..... +++++|+.+++..+
T Consensus 133 ~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~----~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 208 (499)
T PLN03234 133 LFSPNRVASFRPVREEECQRMMDKIYKAAD----QSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQ 208 (499)
T ss_pred hcCHHHHHHhHHHHHHHHHHHHHHHHHhcc----CCCeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHH
Confidence 488999999999999988 666665444 56678888888766
Q ss_pred ------------C----------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c-CCC---------------------CCc
Q 036053 46 ------------G----------SRKRMTVYFLRMFKIFDGIIDERLQVK-E-SLM---------------------NSE 80 (184)
Q Consensus 46 ------------~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~-~~~---------------------D~~ 80 (184)
+ ..++..++.+++.+++.++|+++++.. . .+. |++
T Consensus 209 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~ 288 (499)
T PLN03234 209 ALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQPFSIKFTHEN 288 (499)
T ss_pred HHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcccHHHHHHHHhhccCcCCCCCHHH
Confidence 0 013455677788888888888875432 1 000 122
Q ss_pred c----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc---------------------------
Q 036053 81 V----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR--------------------------- 123 (184)
Q Consensus 81 i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~--------------------------- 123 (184)
| |+||||++++|++++|++||++|+||++||+++++..+.++.
T Consensus 289 i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~ 368 (499)
T PLN03234 289 VKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILL 368 (499)
T ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccC
Confidence 2 999999999999999999999999999999999875433321
Q ss_pred --------------------------ccccCCCCC-CCCCCCCCCcccCCCCC--CcCCCCceeecCCCCCCCCCHHHHH
Q 036053 124 --------------------------AMGSDSNIW-QNPISFVHESFLDSEID--VKGRDFQLIPLGAGRRIYPGLPLAH 174 (184)
Q Consensus 124 --------------------------~~~~d~~~~-~~p~~F~PeR~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~ 174 (184)
++||||++| +||++|+||||+++... .+...+.|+|||+|+|.|+|+++|+
T Consensus 369 ~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~ 448 (499)
T PLN03234 369 HRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGI 448 (499)
T ss_pred CcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHH
Confidence 899999999 89999999999975432 2334678999999999999999999
Q ss_pred HHHHHhhcc
Q 036053 175 RMAHLMLTF 183 (184)
Q Consensus 175 ~~~~~~la~ 183 (184)
+|+++++|+
T Consensus 449 ~e~~~~la~ 457 (499)
T PLN03234 449 AMVEIPFAN 457 (499)
T ss_pred HHHHHHHHH
Confidence 999999874
No 4
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=233.76 Aligned_cols=177 Identities=24% Similarity=0.350 Sum_probs=139.4
Q ss_pred CChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc---------------------------------
Q 036053 2 FTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT--------------------------------- 45 (184)
Q Consensus 2 fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~--------------------------------- 45 (184)
|+.+.|+.+.....+.+ +..+.. .. .+..||+++.+.++
T Consensus 140 f~~~~L~~~~~~~~~~~~~~~~~~~~-~~----~~~~vd~~~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~ 214 (497)
T KOG0157|consen 140 FHFEILKSFVPVFIESSLILLLLLEL-AA----SGEEVDLQDLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLT 214 (497)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-hh----cCCeEcHHHHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHH
Confidence 67788888888877777 223333 22 23339999988887
Q ss_pred ---------C----------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c-C----CC-----------------C----C
Q 036053 46 ---------G----------SRKRMTVYFLRMFKIFDGIIDERLQVK-E-S----LM-----------------N----S 79 (184)
Q Consensus 46 ---------~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~-~----~~-----------------D----~ 79 (184)
+ ..++..++.+.+++++.++|++|++.. . + .. | +
T Consensus 215 ~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~~~l~~~~i~d 294 (497)
T KOG0157|consen 215 ELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEEDKPLTDEDIRD 294 (497)
T ss_pred HHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhccCCCCHHHHHH
Confidence 2 556667799999999999999998653 1 1 11 1 1
Q ss_pred cc------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCC-Cc-----------------------------
Q 036053 80 EV------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKV-DR----------------------------- 123 (184)
Q Consensus 80 ~i------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~-~~----------------------------- 123 (184)
++ |+||||++++|++++|+.||++|+|+++|++++++..... ..
T Consensus 295 ~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~ 374 (497)
T KOG0157|consen 295 EVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARK 374 (497)
T ss_pred HHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcc
Confidence 11 9999999999999999999999999999999999743221 10
Q ss_pred ------------------------ccccCCCCCC-CCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHH
Q 036053 124 ------------------------AMGSDSNIWQ-NPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAH 178 (184)
Q Consensus 124 ------------------------~~~~d~~~~~-~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~ 178 (184)
++|||+.+|+ ||++|+||||+++......++++|+|||+|+|.|+|++||++||+
T Consensus 375 ~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemK 454 (497)
T KOG0157|consen 375 ATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMK 454 (497)
T ss_pred cCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHH
Confidence 8899999997 999999999996543334557899999999999999999999999
Q ss_pred Hhhcc
Q 036053 179 LMLTF 183 (184)
Q Consensus 179 ~~la~ 183 (184)
+++++
T Consensus 455 v~l~~ 459 (497)
T KOG0157|consen 455 VVLAH 459 (497)
T ss_pred HHHHH
Confidence 99874
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=9.2e-33 Score=230.33 Aligned_cols=97 Identities=24% Similarity=0.435 Sum_probs=86.8
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+||||++++|++++|++||++|+||++||+++++....++.
T Consensus 295 G~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~ 374 (482)
T PTZ00404 295 GVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIG 374 (482)
T ss_pred ccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEec
Confidence 999999999999999999999999999999999875332221
Q ss_pred ----------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ----------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ----------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++||||++|+||||++.. ....|+|||+|+|.|+|++||++|+++++|+
T Consensus 375 ~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ 445 (482)
T PTZ00404 375 GGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSN 445 (482)
T ss_pred CCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHH
Confidence 899999999999999999998652 3568999999999999999999999999873
No 6
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.9e-32 Score=229.54 Aligned_cols=179 Identities=28% Similarity=0.487 Sum_probs=132.0
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
.|++.+++.+.+.+.+++ ++.+.+.+. ++++||+.+++..+
T Consensus 134 ~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~----~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 209 (502)
T PLN02966 134 LFSPTRVATFKHVREEEARRMMDKINKAAD----KSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQ 209 (502)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHH
Confidence 478899999999999998 777765544 56689999988887
Q ss_pred ------------Ch----------HHHHHHHHHHHHHHHHHHHHHHHhhh--c-CC-C-------------------CCc
Q 036053 46 ------------GS----------RKRMTVYFLRMFKIFDGIIDERLQVK--E-SL-M-------------------NSE 80 (184)
Q Consensus 46 ------------~~----------~~~~~~~~~~~~~~~~~~i~~r~~~~--~-~~-~-------------------D~~ 80 (184)
+. .+......+++.+++.++++++.... . +. + +++
T Consensus 210 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~ 289 (502)
T PLN02966 210 SVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDN 289 (502)
T ss_pred HHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHhccCcCCCCCHHH
Confidence 00 00011223445555666655542211 0 00 0 112
Q ss_pred c----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC--CCCCc-------------------------
Q 036053 81 V----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGND--GKVDR------------------------- 123 (184)
Q Consensus 81 i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~--~~~~~------------------------- 123 (184)
| |+||||++++|++++|++||++|+||++||+++++.. ..++.
T Consensus 290 i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~ 369 (502)
T PLN02966 290 VKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPL 369 (502)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCccc
Confidence 2 9999999999999999999999999999999998631 11111
Q ss_pred ----------------------------ccccCCCCC-CCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHH
Q 036053 124 ----------------------------AMGSDSNIW-QNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAH 174 (184)
Q Consensus 124 ----------------------------~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~ 174 (184)
++||||++| |||++|+||||++...........|+|||+|+|.|+|++||+
T Consensus 370 ~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~ 449 (502)
T PLN02966 370 LIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGA 449 (502)
T ss_pred ccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHH
Confidence 999999999 999999999999654322234568999999999999999999
Q ss_pred HHHHHhhcc
Q 036053 175 RMAHLMLTF 183 (184)
Q Consensus 175 ~~~~~~la~ 183 (184)
+|+++++|.
T Consensus 450 ~el~~~la~ 458 (502)
T PLN02966 450 AMLEVPYAN 458 (502)
T ss_pred HHHHHHHHH
Confidence 999999873
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=2.5e-32 Score=229.55 Aligned_cols=102 Identities=36% Similarity=0.745 Sum_probs=88.6
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+||||++++|++++|++||++|+||++||+++++..+.++.
T Consensus 316 G~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g 395 (516)
T PLN02183 316 GTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAG 395 (516)
T ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECC
Confidence 999999999999999999999999999999999874332221
Q ss_pred --------------ccccCCCCCCCCCCCCCCcccCCCC-CCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 --------------AMGSDSNIWQNPISFVHESFLDSEI-DVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 --------------~~~~d~~~~~~p~~F~PeR~l~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||++++. ......+.|+|||+|+|.|+|++||++|+++++|+
T Consensus 396 ~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ 470 (516)
T PLN02183 396 YFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAH 470 (516)
T ss_pred EEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 8999999999999999999996543 11224568999999999999999999999999874
No 8
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.7e-32 Score=229.05 Aligned_cols=102 Identities=27% Similarity=0.599 Sum_probs=89.3
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+||||++++|++++|++||++|+|+++||+++++..+.++.
T Consensus 339 G~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~ 418 (543)
T PLN02971 339 APDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVA 418 (543)
T ss_pred ccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeEC
Confidence 999999999999999999999999999999999986444332
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCC--CcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEID--VKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||+++... ....++.|+|||+|+|.|+|++||++|+++++|.
T Consensus 419 G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ 495 (543)
T PLN02971 419 GYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLAR 495 (543)
T ss_pred CEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999975422 1123568999999999999999999999999873
No 9
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=7.6e-32 Score=226.01 Aligned_cols=179 Identities=27% Similarity=0.475 Sum_probs=133.6
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
+|++++++.+.+.+.+++ ++.+.+... +|+++|+.+++..+
T Consensus 135 ~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~----~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~ 210 (504)
T PLN00110 135 MLGGKALEDWSQVRTVELGHMLRAMLELSQ----RGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVEL 210 (504)
T ss_pred hCCHHHHHHhhHHHHHHHHHHHHHHHHhcc----CCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHH
Confidence 478899999999988887 666655444 46677877766543
Q ss_pred -------------Ch---------HHHHHHHHHHHHHHHHHHHHHHHhhh-c--CCCC-------------------Ccc
Q 036053 46 -------------GS---------RKRMTVYFLRMFKIFDGIIDERLQVK-E--SLMN-------------------SEV 81 (184)
Q Consensus 46 -------------~~---------~~~~~~~~~~~~~~~~~~i~~r~~~~-~--~~~D-------------------~~i 81 (184)
+. .++..+..+.+.+++.++++++++.. . +..| ++|
T Consensus 211 ~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i 290 (504)
T PLN00110 211 MTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENSTGEKLTLTNI 290 (504)
T ss_pred HHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccCCCCCCHHHH
Confidence 10 12233456667777778887776532 1 1111 112
Q ss_pred ----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc----------------------------
Q 036053 82 ----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR---------------------------- 123 (184)
Q Consensus 82 ----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~---------------------------- 123 (184)
|+|||+++++|++++|++||++|+||++|++++++....++.
T Consensus 291 ~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~ 370 (504)
T PLN00110 291 KALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLP 370 (504)
T ss_pred HHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccc
Confidence 999999999999999999999999999999999875332221
Q ss_pred -------------------------ccccCCCCCCCCCCCCCCcccCCCCCCc---CCCCceeecCCCCCCCCCHHHHHH
Q 036053 124 -------------------------AMGSDSNIWQNPISFVHESFLDSEIDVK---GRDFQLIPLGAGRRIYPGLPLAHR 175 (184)
Q Consensus 124 -------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~ 175 (184)
++|+||++|+||++|+||||+++..... ...+.++|||+|+|.|+|++||++
T Consensus 371 R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~ 450 (504)
T PLN00110 371 RVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIV 450 (504)
T ss_pred cccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHH
Confidence 8999999999999999999996532111 123579999999999999999999
Q ss_pred HHHHhhcc
Q 036053 176 MAHLMLTF 183 (184)
Q Consensus 176 ~~~~~la~ 183 (184)
|+++++|+
T Consensus 451 e~~~~la~ 458 (504)
T PLN00110 451 LVEYILGT 458 (504)
T ss_pred HHHHHHHH
Confidence 99999874
No 10
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3.7e-32 Score=228.47 Aligned_cols=178 Identities=19% Similarity=0.268 Sum_probs=130.2
Q ss_pred CChhHHhHHHHHHHHHH----HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 2 FTKNQLDASQAIRHKRC----NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 2 fs~~~l~~~~~~~~~~~----~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
|++++|+.+.+.+..++ ++.+.+... .+.+||+.+++..+
T Consensus 134 fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~----~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 209 (516)
T PLN03195 134 FASKNLRDFSTVVFREYSLKLSSILSQASF----ANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDT 209 (516)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHH
Confidence 78899999999875544 444544333 45678988888887
Q ss_pred ----------ChH------------HHHHHHHHHHHHHHHHHHHHHHhhh-c----C--CC-------------------
Q 036053 46 ----------GSR------------KRMTVYFLRMFKIFDGIIDERLQVK-E----S--LM------------------- 77 (184)
Q Consensus 46 ----------~~~------------~~~~~~~~~~~~~~~~~i~~r~~~~-~----~--~~------------------- 77 (184)
... +...+....+.+++.++++++++.. . . ..
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~ 289 (516)
T PLN03195 210 ANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPDSNFT 289 (516)
T ss_pred HHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCCCCCCC
Confidence 000 1112355667777888888776531 1 0 00
Q ss_pred CCcc----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC--------------------CCCCc----
Q 036053 78 NSEV----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGND--------------------GKVDR---- 123 (184)
Q Consensus 78 D~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~--------------------~~~~~---- 123 (184)
|++| |+|||+++++|++|+|++||++|+||++||+++++.. ..++.
T Consensus 290 ~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (516)
T PLN03195 290 DKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLG 369 (516)
T ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHh
Confidence 1122 9999999999999999999999999999999876421 11221
Q ss_pred -------------------------------------------------ccccCCCCC-CCCCCCCCCcccCCCCCCcCC
Q 036053 124 -------------------------------------------------AMGSDSNIW-QNPISFVHESFLDSEIDVKGR 153 (184)
Q Consensus 124 -------------------------------------------------~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~ 153 (184)
++||||++| +||++|+||||++........
T Consensus 370 ~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~ 449 (516)
T PLN03195 370 KLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNAS 449 (516)
T ss_pred cCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCC
Confidence 999999999 999999999999643211224
Q ss_pred CCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 154 DFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 154 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++.|+|||+|+|.|+|++||++|+++++|+
T Consensus 450 ~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ 479 (516)
T PLN03195 450 PFKFTAFQAGPRICLGKDSAYLQMKMALAL 479 (516)
T ss_pred CceEeccCCCCCcCcCHHHHHHHHHHHHHH
Confidence 567999999999999999999999999873
No 11
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=3.3e-32 Score=227.97 Aligned_cols=133 Identities=18% Similarity=0.358 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--c----C--CC--------------------CCcc----------cccchHHHHHH
Q 036053 51 MTVYFLRMFKIFDGIIDERLQVK--E----S--LM--------------------NSEV----------RTDTTSRTVEW 92 (184)
Q Consensus 51 ~~~~~~~~~~~~~~~i~~r~~~~--~----~--~~--------------------D~~i----------g~dtts~~l~~ 92 (184)
..++.+.+.+++.++|++|++.. . . .+ |++| |+||||++++|
T Consensus 244 ~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w 323 (500)
T PLN02169 244 MRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTW 323 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHH
Confidence 45667788888999998887531 0 0 01 1112 99999999999
Q ss_pred HHHHHhhChHHHHHHHHHHHHHhcCCCCCC---------c--------------------------------------cc
Q 036053 93 AVAEFLHNPKVLTTAQNELRELLGNDGKVD---------R--------------------------------------AM 125 (184)
Q Consensus 93 ~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~---------~--------------------------------------~~ 125 (184)
++++|++||++|+||++||+++++..+... + ++
T Consensus 324 ~l~~La~~Pevq~kl~~Ei~~v~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~i 403 (500)
T PLN02169 324 FFWLLSKHPQVMAKIRHEINTKFDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYAL 403 (500)
T ss_pred HHHHHHCCHHHHHHHHHHHHhhCCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHh
Confidence 999999999999999999998753211110 0 99
Q ss_pred ccCCCCC-CCCCCCCCCcccCCCCCCc-CCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 126 GSDSNIW-QNPISFVHESFLDSEIDVK-GRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 126 ~~d~~~~-~~p~~F~PeR~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
||||++| +||++|+||||++++.... ..++.|+|||+|+|.|+|++||++|+++++|+
T Consensus 404 hrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ 463 (500)
T PLN02169 404 GRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALE 463 (500)
T ss_pred hCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999 8999999999997543221 23678999999999999999999999999874
No 12
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=3.8e-32 Score=222.26 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=137.1
Q ss_pred Chh-HHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc---------------------------------
Q 036053 3 TKN-QLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT--------------------------------- 45 (184)
Q Consensus 3 s~~-~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~--------------------------------- 45 (184)
+.. .+ .+.+.+++.+ ++.+..... .++++|+.++++.+
T Consensus 107 ~~~~~~-~~~~~i~~~~~~l~~~l~~~~~----~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 181 (463)
T PF00067_consen 107 SSKKIL-KLEPLIDEEAEELIDQLRKKAG----SSGPVDLFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELF 181 (463)
T ss_dssp SHHHHH-HHHHHHHHHHHHHHHHHHHTTT----SESEEEHHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHH
T ss_pred cccccc-cccccccccccccccccccccc----ccceeeeecccccccccccccccccceeeeccccccccccccccccc
Confidence 444 45 7888888877 777777655 45579999998887
Q ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cC--CC-C--------C-------cc---
Q 036053 46 ----------------------GSRKRMTVYFLRMFKIFDGIIDERLQVK-ES--LM-N--------S-------EV--- 81 (184)
Q Consensus 46 ----------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~--~~-D--------~-------~i--- 81 (184)
...+...++.+.+.+++.++++++++.. .+ .. | . .+
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~ 261 (463)
T PF00067_consen 182 ELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDESRRDLLDSLLQASSDSDGPSGLSDE 261 (463)
T ss_dssp HHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTTSSSSHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2334455566888899999999988766 33 11 1 1 12
Q ss_pred ------------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------
Q 036053 82 ------------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------- 123 (184)
Q Consensus 82 ------------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------- 123 (184)
|+|||+++++|++++|++||++|+||++||+++++....++.
T Consensus 262 ~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~ 341 (463)
T PF00067_consen 262 EIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFS 341 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999865442221
Q ss_pred ---------------------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHH
Q 036053 124 ---------------------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRM 176 (184)
Q Consensus 124 ---------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~ 176 (184)
++|+||++|+||++|+||||++.+.........|+|||+|+|.|||++||++|
T Consensus 342 ~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~ 421 (463)
T PF00067_consen 342 LPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMME 421 (463)
T ss_dssp EEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHH
Confidence 99999999999999999999988652234567899999999999999999999
Q ss_pred HHHhhcc
Q 036053 177 AHLMLTF 183 (184)
Q Consensus 177 ~~~~la~ 183 (184)
+++++|.
T Consensus 422 ~~~~la~ 428 (463)
T PF00067_consen 422 MKVFLAK 428 (463)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 13
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=9.2e-32 Score=230.01 Aligned_cols=178 Identities=13% Similarity=0.191 Sum_probs=132.3
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------C-----------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT--------------G----------------- 46 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~--------------~----------------- 46 (184)
.||+.++..+++.+.+++ +++|.+... .+.+||+.+++..+ .
T Consensus 232 ~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~----~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~ 307 (633)
T PLN02738 232 ALHQKYVAAMISLFGQASDRLCQKLDAAAS----DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLR 307 (633)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHH
Confidence 488999999999999988 777877655 67789999988887 0
Q ss_pred ------------h-----------HHHHHHHHHHHHHHHHHHHHHHHhhh-------------cCCCC------------
Q 036053 47 ------------S-----------RKRMTVYFLRMFKIFDGIIDERLQVK-------------ESLMN------------ 78 (184)
Q Consensus 47 ------------~-----------~~~~~~~~~~~~~~~~~~i~~r~~~~-------------~~~~D------------ 78 (184)
+ .++..+..+.+.+++..+++.+++.. ....|
T Consensus 308 ~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~~~l 387 (633)
T PLN02738 308 EAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASGDDV 387 (633)
T ss_pred HHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcCCCC
Confidence 0 01112233344455555555433210 00001
Q ss_pred --Ccc----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc-----------------------
Q 036053 79 --SEV----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR----------------------- 123 (184)
Q Consensus 79 --~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~----------------------- 123 (184)
++| |+||||++|+|++++|++||++|+||++||+++++. ..++.
T Consensus 388 s~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~ 466 (633)
T PLN02738 388 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQP 466 (633)
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCc
Confidence 111 999999999999999999999999999999999874 32221
Q ss_pred -----------------------------ccccCCCCCCCCCCCCCCcccCCCC--CCcCCCCceeecCCCCCCCCCHHH
Q 036053 124 -----------------------------AMGSDSNIWQNPISFVHESFLDSEI--DVKGRDFQLIPLGAGRRIYPGLPL 172 (184)
Q Consensus 124 -----------------------------~~~~d~~~~~~p~~F~PeR~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~ 172 (184)
.+||||++||||++|+||||+.... ......+.|+|||.|+|.|+|++|
T Consensus 467 p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~l 546 (633)
T PLN02738 467 PVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMF 546 (633)
T ss_pred cccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHH
Confidence 8999999999999999999984321 112345689999999999999999
Q ss_pred HHHHHHHhhcc
Q 036053 173 AHRMAHLMLTF 183 (184)
Q Consensus 173 A~~~~~~~la~ 183 (184)
|++|+++++|+
T Consensus 547 A~~El~l~LA~ 557 (633)
T PLN02738 547 ASFENVVATAM 557 (633)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 14
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=7.5e-32 Score=225.89 Aligned_cols=102 Identities=32% Similarity=0.694 Sum_probs=88.6
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+||||++++|++|+|++||++|+||++||+++++.++.++.
T Consensus 305 G~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~ 384 (503)
T PLN02394 305 AIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLG 384 (503)
T ss_pred chhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccC
Confidence 999999999999999999999999999999999875433221
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCC--CcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEID--VKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||+++... .......|+|||+|+|.|+|++||++|+++++|+
T Consensus 385 g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ 461 (503)
T PLN02394 385 GYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGR 461 (503)
T ss_pred CEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999865321 1223568999999999999999999999999874
No 15
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=9e-32 Score=226.28 Aligned_cols=179 Identities=24% Similarity=0.388 Sum_probs=133.0
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
.||+++++.+.+.+.+++ ++.+.+... .+.++|+.+.+..+
T Consensus 142 ~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~ 217 (519)
T PLN00168 142 TLHPSRVRLFAPARAWVRRVLVDKLRREAE----DAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLY 217 (519)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHH
Confidence 488999999999998888 677765433 33445666555444
Q ss_pred -----------C---------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c----C---------CC--------------
Q 036053 46 -----------G---------SRKRMTVYFLRMFKIFDGIIDERLQVK-E----S---------LM-------------- 77 (184)
Q Consensus 46 -----------~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~----~---------~~-------------- 77 (184)
+ ..++..+..+++.+++.++|+++++.. . + ..
T Consensus 218 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 297 (519)
T PLN00168 218 VSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPED 297 (519)
T ss_pred hcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhcccc
Confidence 1 011233456677888888888776431 0 0 00
Q ss_pred ------CCcc----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-CCCCc-----------------
Q 036053 78 ------NSEV----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGND-GKVDR----------------- 123 (184)
Q Consensus 78 ------D~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~-~~~~~----------------- 123 (184)
|++| |+|||+++++|++++|++||++|+|+++||+++++.. +.++.
T Consensus 298 ~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~Etl 377 (519)
T PLN00168 298 GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGL 377 (519)
T ss_pred ccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHh
Confidence 1222 9999999999999999999999999999999998743 22221
Q ss_pred ------------------------------------ccccCCCCCCCCCCCCCCcccCCCCC----C-cCCCCceeecCC
Q 036053 124 ------------------------------------AMGSDSNIWQNPISFVHESFLDSEID----V-KGRDFQLIPLGA 162 (184)
Q Consensus 124 ------------------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~----~-~~~~~~~~~Fg~ 162 (184)
++||||++|+||++|+||||++.... . ....+.|+|||+
T Consensus 378 Rl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~ 457 (519)
T PLN00168 378 RKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGV 457 (519)
T ss_pred hcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCC
Confidence 99999999999999999999864211 1 122457999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcc
Q 036053 163 GRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 163 G~r~C~G~~~A~~~~~~~la~ 183 (184)
|+|.|||++||++|+++++|+
T Consensus 458 G~R~C~G~~lA~~e~~~~la~ 478 (519)
T PLN00168 458 GRRICAGLGIAMLHLEYFVAN 478 (519)
T ss_pred CCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 16
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=1.3e-31 Score=225.17 Aligned_cols=178 Identities=35% Similarity=0.560 Sum_probs=135.5
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
.|++++++.+++.+++++ ++.+.+.. ++.+||+.+++..+
T Consensus 138 ~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-----~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 212 (517)
T PLN02687 138 LFSAKALDDFRHVREEEVALLVRELARQH-----GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVE 212 (517)
T ss_pred hCCHHHHHHhHHHHHHHHHHHHHHHHHhc-----CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHH
Confidence 488999999999999988 66665432 34578888777665
Q ss_pred --------------C---------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c-CC---C--------------------
Q 036053 46 --------------G---------SRKRMTVYFLRMFKIFDGIIDERLQVK-E-SL---M-------------------- 77 (184)
Q Consensus 46 --------------~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~-~~---~-------------------- 77 (184)
+ ..++..+..+.+.+++.++|+++++.. . +. +
T Consensus 213 ~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~ 292 (517)
T PLN02687 213 LMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGR 292 (517)
T ss_pred HHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccC
Confidence 0 012334456667788888888887542 1 00 0
Q ss_pred --CCcc----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc----------------------
Q 036053 78 --NSEV----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR---------------------- 123 (184)
Q Consensus 78 --D~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~---------------------- 123 (184)
+++| |+|||+++++|++++|++||++|+||++||+++++....++.
T Consensus 293 l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~ 372 (517)
T PLN02687 293 ITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPS 372 (517)
T ss_pred CCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCC
Confidence 1112 999999999999999999999999999999998865332221
Q ss_pred -------------------------------ccccCCCCCCCCCCCCCCcccCCCCC----CcCCCCceeecCCCCCCCC
Q 036053 124 -------------------------------AMGSDSNIWQNPISFVHESFLDSEID----VKGRDFQLIPLGAGRRIYP 168 (184)
Q Consensus 124 -------------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~----~~~~~~~~~~Fg~G~r~C~ 168 (184)
++||||++|+||++|+||||++.... .....+.|+|||+|+|.|+
T Consensus 373 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~ 452 (517)
T PLN02687 373 TPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICA 452 (517)
T ss_pred ccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCC
Confidence 99999999999999999999965321 1123567999999999999
Q ss_pred CHHHHHHHHHHhhcc
Q 036053 169 GLPLAHRMAHLMLTF 183 (184)
Q Consensus 169 G~~~A~~~~~~~la~ 183 (184)
|++||++|+++++|+
T Consensus 453 G~~~A~~e~~~~la~ 467 (517)
T PLN02687 453 GLSWGLRMVTLLTAT 467 (517)
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999999999874
No 17
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=9.4e-32 Score=224.74 Aligned_cols=135 Identities=17% Similarity=0.281 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-c-C----CCC-------------Ccc----------cccchHHHHHHHHHHHhh
Q 036053 49 KRMTVYFLRMFKIFDGIIDERLQVK-E-S----LMN-------------SEV----------RTDTTSRTVEWAVAEFLH 99 (184)
Q Consensus 49 ~~~~~~~~~~~~~~~~~i~~r~~~~-~-~----~~D-------------~~i----------g~dtts~~l~~~l~~L~~ 99 (184)
++..++.+++.+++.++|+++++.. . + ..| ++| |+|||+++++|++++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~ 308 (490)
T PLN02500 229 RKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQG 308 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Confidence 4555667888899999998887642 1 1 111 222 999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhcC-----CCCCCc---------------------------------------------------
Q 036053 100 NPKVLTTAQNELRELLGN-----DGKVDR--------------------------------------------------- 123 (184)
Q Consensus 100 ~p~~~~kl~~Ei~~~~~~-----~~~~~~--------------------------------------------------- 123 (184)
||++|+||++||+++++. ...++.
T Consensus 309 ~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~ 388 (490)
T PLN02500 309 CPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVI 388 (490)
T ss_pred CHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEech
Confidence 999999999999998631 111111
Q ss_pred -ccccCCCCCCCCCCCCCCcccCCCCCCc------CCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 -AMGSDSNIWQNPISFVHESFLDSEIDVK------GRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 -~~~~d~~~~~~p~~F~PeR~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||+++..... ..++.|+|||+|+|.|+|++||++|+++++|+
T Consensus 389 ~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ 455 (490)
T PLN02500 389 AAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHH 455 (490)
T ss_pred hhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 8999999999999999999986532111 13568999999999999999999999999873
No 18
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.98 E-value=1.9e-31 Score=223.36 Aligned_cols=132 Identities=17% Similarity=0.243 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-cCCCC------------Ccc----------cccchHHHHHHHHHHHhhChHHHHHH
Q 036053 51 MTVYFLRMFKIFDGIIDERLQVK-ESLMN------------SEV----------RTDTTSRTVEWAVAEFLHNPKVLTTA 107 (184)
Q Consensus 51 ~~~~~~~~~~~~~~~i~~r~~~~-~~~~D------------~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl 107 (184)
+.++.+.+.+++.++|+++++.. ....| ++| |+|||+++|+|++|+|++||++|+||
T Consensus 251 ~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl 330 (502)
T PLN02426 251 LKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRFMASINDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAI 330 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHHHhcCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHH
Confidence 34556777888888888887642 11111 222 99999999999999999999999999
Q ss_pred HHHHHHHhcCCC-CCCc-----------------------------------------------------ccccCCCCC-
Q 036053 108 QNELRELLGNDG-KVDR-----------------------------------------------------AMGSDSNIW- 132 (184)
Q Consensus 108 ~~Ei~~~~~~~~-~~~~-----------------------------------------------------~~~~d~~~~- 132 (184)
++||+++++... .++. ++||||++|
T Consensus 331 ~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G 410 (502)
T PLN02426 331 REEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWG 410 (502)
T ss_pred HHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccC
Confidence 999999886432 2221 899999999
Q ss_pred CCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhc
Q 036053 133 QNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLT 182 (184)
Q Consensus 133 ~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la 182 (184)
+||++|+||||++........++.++|||+|+|.|+|++||++|+++++|
T Consensus 411 ~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (502)
T PLN02426 411 PDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAV 460 (502)
T ss_pred cChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999999999874311122356799999999999999999999999987
No 19
>PLN02290 cytokinin trans-hydroxylase
Probab=99.98 E-value=1.5e-31 Score=224.83 Aligned_cols=176 Identities=16% Similarity=0.245 Sum_probs=135.6
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
.|++++++.+.+.+.+++ ++.+.+.... ++.+||+.+++..+
T Consensus 162 ~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 238 (516)
T PLN02290 162 AFMGDRLKGYAGHMVECTKQMLQSLQKAVES---GQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCA 238 (516)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCceEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Confidence 378999999999999888 7777655430 23578998888877
Q ss_pred --------C--------hHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCC---------------------Ccc-
Q 036053 46 --------G--------SRKRMTVYFLRMFKIFDGIIDERLQVK-ES-----LMN---------------------SEV- 81 (184)
Q Consensus 46 --------~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~-----~~D---------------------~~i- 81 (184)
+ ..+++......+.+++.++|+++++.. .+ ..| ++|
T Consensus 239 ~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~ 318 (516)
T PLN02290 239 QATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIM 318 (516)
T ss_pred HhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHH
Confidence 0 012233456677888888888876532 11 001 112
Q ss_pred ---------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc-----------------------------
Q 036053 82 ---------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR----------------------------- 123 (184)
Q Consensus 82 ---------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~----------------------------- 123 (184)
|+|||+++++|++++|++||++|+||++||++++|.. .++.
T Consensus 319 ~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~ 397 (516)
T PLN02290 319 DECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRM 397 (516)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccccee
Confidence 9999999999999999999999999999999998753 2221
Q ss_pred -----------------------ccccCCCCC-CCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHH
Q 036053 124 -----------------------AMGSDSNIW-QNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHL 179 (184)
Q Consensus 124 -----------------------~~~~d~~~~-~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 179 (184)
++||||++| +||++|+||||++... .....|+|||+|+|.|+|++||++|+++
T Consensus 398 ~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l 474 (516)
T PLN02290 398 AFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKI 474 (516)
T ss_pred ecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHH
Confidence 999999999 8999999999995421 1245799999999999999999999999
Q ss_pred hhcc
Q 036053 180 MLTF 183 (184)
Q Consensus 180 ~la~ 183 (184)
++|+
T Consensus 475 ~la~ 478 (516)
T PLN02290 475 ILAM 478 (516)
T ss_pred HHHH
Confidence 9873
No 20
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.98 E-value=3e-31 Score=222.82 Aligned_cols=179 Identities=28% Similarity=0.460 Sum_probs=133.0
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
+|++++++.+.+.+.+++ ++.+.+... .+.++|+.+.+..+
T Consensus 136 ~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 211 (514)
T PLN03112 136 LLTTKRLESFAKHRAEEARHLIQDVWEAAQ----TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHIT 211 (514)
T ss_pred hcCHHHHHHhhHHHHHHHHHHHHHHHHhhc----cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHH
Confidence 488899999999998887 555544333 45567776666544
Q ss_pred ----------------C---------hHHHHHHHHHHHHHHHHHHHHHHHhhh-c----CCC-C----------------
Q 036053 46 ----------------G---------SRKRMTVYFLRMFKIFDGIIDERLQVK-E----SLM-N---------------- 78 (184)
Q Consensus 46 ----------------~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-~----~~~-D---------------- 78 (184)
+ ..++..+..+.+.+++.++++++++.. . ... |
T Consensus 212 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ 291 (514)
T PLN03112 212 HELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEH 291 (514)
T ss_pred HHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccC
Confidence 0 013344556677778888888776532 1 010 1
Q ss_pred ---Ccc----------cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc----------------------
Q 036053 79 ---SEV----------RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR---------------------- 123 (184)
Q Consensus 79 ---~~i----------g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~---------------------- 123 (184)
++| |+||||++++|++++|++||++|+||++||+++++..+.++.
T Consensus 292 l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~ 371 (514)
T PLN03112 292 MDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPA 371 (514)
T ss_pred CCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCC
Confidence 112 999999999999999999999999999999999875433221
Q ss_pred -------------------------------ccccCCCCCCCCCCCCCCcccCCCCC---C-cCCCCceeecCCCCCCCC
Q 036053 124 -------------------------------AMGSDSNIWQNPISFVHESFLDSEID---V-KGRDFQLIPLGAGRRIYP 168 (184)
Q Consensus 124 -------------------------------~~~~d~~~~~~p~~F~PeR~l~~~~~---~-~~~~~~~~~Fg~G~r~C~ 168 (184)
++||||++|+||++|+||||+..... . ....+.|+|||+|+|.||
T Consensus 372 ~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~ 451 (514)
T PLN03112 372 GPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCP 451 (514)
T ss_pred cccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCC
Confidence 99999999999999999998653211 0 122457999999999999
Q ss_pred CHHHHHHHHHHhhcc
Q 036053 169 GLPLAHRMAHLMLTF 183 (184)
Q Consensus 169 G~~~A~~~~~~~la~ 183 (184)
|++||++|+++++|+
T Consensus 452 G~~~A~~e~~~~la~ 466 (514)
T PLN03112 452 GAPLGVTMVLMALAR 466 (514)
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999999999874
No 21
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=4.1e-31 Score=214.88 Aligned_cols=180 Identities=20% Similarity=0.286 Sum_probs=146.5
Q ss_pred CCChhHHhHHHHHHHHHH---HHHHHHhhhhcCCCCcceehHHHHhcc--------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRC---NNYSTMCIKVARGVRRSVDIGQAAFTT-------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~---~~~l~~~~~~~~~~~~~vdl~~~~~~~-------------------------------- 45 (184)
++.|.+++.|.|.++..+ +..+....+- .....+.|+.+.+.++
T Consensus 161 ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~-~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai 239 (519)
T KOG0159|consen 161 LLQPQAVRRYLPQLNAVSDDFVERLRAQRDP-ERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAI 239 (519)
T ss_pred hcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc-cccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHH
Confidence 468899999999998888 6666655440 0023567888888887
Q ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHHHHHHhhh--cCC---C-C-------------------
Q 036053 46 ----------------------GSRKRMTVYFLRMFKIFDGIIDERLQVK--ESL---M-N------------------- 78 (184)
Q Consensus 46 ----------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~---~-D------------------- 78 (184)
+.++++.++...+.++..++|+...+.. ++. . +
T Consensus 240 ~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~~l~~k~~~~ 319 (519)
T KOG0159|consen 240 KKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRKELSRKDAKA 319 (519)
T ss_pred HHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHccCCHHHHHH
Confidence 5788999999999999999999887766 211 1 1
Q ss_pred ---Ccc--cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-CCCCc-----------------------------
Q 036053 79 ---SEV--RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGND-GKVDR----------------------------- 123 (184)
Q Consensus 79 ---~~i--g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~-~~~~~----------------------------- 123 (184)
|-+ |.||||++++|+||+|++||++|+||++|+.+++... ..++.
T Consensus 320 ~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~ 399 (519)
T KOG0159|consen 320 NVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRV 399 (519)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccc
Confidence 111 9999999999999999999999999999999998652 22211
Q ss_pred -----------------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHh
Q 036053 124 -----------------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLM 180 (184)
Q Consensus 124 -----------------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 180 (184)
.+.+||.+|++|++|+|||||.+.. .+.+++.++|||.|+|+|+|+.+|.+||.++
T Consensus 400 l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~ll 478 (519)
T KOG0159|consen 400 LPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLL 478 (519)
T ss_pred cchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHH
Confidence 6778899999999999999998863 2557899999999999999999999999999
Q ss_pred hc
Q 036053 181 LT 182 (184)
Q Consensus 181 la 182 (184)
||
T Consensus 479 La 480 (519)
T KOG0159|consen 479 LA 480 (519)
T ss_pred HH
Confidence 87
No 22
>PLN02774 brassinosteroid-6-oxidase
Probab=99.97 E-value=1e-30 Score=217.19 Aligned_cols=133 Identities=20% Similarity=0.301 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-cCCC----------------CCcc----------cccchHHHHHHHHHHHhhC
Q 036053 48 RKRMTVYFLRMFKIFDGIIDERLQVK-ESLM----------------NSEV----------RTDTTSRTVEWAVAEFLHN 100 (184)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~~----------------D~~i----------g~dtts~~l~~~l~~L~~~ 100 (184)
.++..++++++.+++.++|+++++.. ..++ |++| |+|||+++++|++++|++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~ 294 (463)
T PLN02774 215 YRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDH 294 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC
Confidence 35566778889999999998887542 1111 1222 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCC---CCCCc----------------------------------------------------cc
Q 036053 101 PKVLTTAQNELRELLGND---GKVDR----------------------------------------------------AM 125 (184)
Q Consensus 101 p~~~~kl~~Ei~~~~~~~---~~~~~----------------------------------------------------~~ 125 (184)
|++|+||++||+++.+.. ..++. ++
T Consensus 295 P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~ 374 (463)
T PLN02774 295 PKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREI 374 (463)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHh
Confidence 999999999999997532 11111 89
Q ss_pred ccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 126 GSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 126 ~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
||||++|+||++|+||||++.+.. ....|+|||+|+|.|||++||++|+++++|.
T Consensus 375 ~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ 429 (463)
T PLN02774 375 NYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHY 429 (463)
T ss_pred cCCcccCCChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHH
Confidence 999999999999999999865421 1236999999999999999999999999873
No 23
>PLN02655 ent-kaurene oxidase
Probab=99.97 E-value=2.7e-30 Score=214.80 Aligned_cols=100 Identities=29% Similarity=0.499 Sum_probs=87.3
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+|||+++++|++++|++||++|+||++||+.+++... ++.
T Consensus 274 g~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~ 352 (466)
T PLN02655 274 AADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLG 352 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccC
Confidence 99999999999999999999999999999999987533 221
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||++..... ...+.++|||+|+|.|||++||..+++++++.
T Consensus 353 g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 426 (466)
T PLN02655 353 GYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIAR 426 (466)
T ss_pred CEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 899999999999999999998754221 12468999999999999999999999999873
No 24
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.97 E-value=1.6e-30 Score=215.97 Aligned_cols=172 Identities=16% Similarity=0.214 Sum_probs=132.7
Q ss_pred CCChhHHhHHHHHHHHHHHHHHHHhhhhcCCCCcceehHHHHhcc-----------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRCNNYSTMCIKVARGVRRSVDIGQAAFTT----------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~----------------------------------- 45 (184)
.|++.+++.+.+.+++++.+.+..+ .++++|+.+++..+
T Consensus 136 ~f~~~~l~~~~~~i~~~~~~~~~~~------~~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 209 (463)
T PLN02196 136 AFMPDAIRNMVPDIESIAQESLNSW------EGTQINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSM 209 (463)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHcC------CCCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcc
Confidence 3788899999998888774444433 23356666666555
Q ss_pred ------ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCC-------------CCcc----------cccchHHHHHHHHH
Q 036053 46 ------GSRKRMTVYFLRMFKIFDGIIDERLQVK-ESLM-------------NSEV----------RTDTTSRTVEWAVA 95 (184)
Q Consensus 46 ------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~~-------------D~~i----------g~dtts~~l~~~l~ 95 (184)
...++..+++..+.+++.++|+++++.. ...+ +++| |+|||+++++|+++
T Consensus 210 ~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~ 289 (463)
T PLN02196 210 PINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILK 289 (463)
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 1135567788888999999998876542 1111 1222 99999999999999
Q ss_pred HHhhChHHHHHHHHHHHHHhcCC---CCCCc-------------------------------------------------
Q 036053 96 EFLHNPKVLTTAQNELRELLGND---GKVDR------------------------------------------------- 123 (184)
Q Consensus 96 ~L~~~p~~~~kl~~Ei~~~~~~~---~~~~~------------------------------------------------- 123 (184)
+|++||++|+||++|++++.+.. +.++.
T Consensus 290 ~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~ 369 (463)
T PLN02196 290 YLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLP 369 (463)
T ss_pred HHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEe
Confidence 99999999999999999887532 11111
Q ss_pred ---ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||+... .+..++|||+|+|.|+|++||++|+++++|+
T Consensus 370 ~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ 427 (463)
T PLN02196 370 LFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHH 427 (463)
T ss_pred eHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHH
Confidence 899999999999999999998532 3568999999999999999999999999874
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=99.97 E-value=3.8e-30 Score=215.07 Aligned_cols=101 Identities=26% Similarity=0.379 Sum_probs=86.7
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+||||++++|++|+|++||++|+||++||+++++... ++.
T Consensus 290 G~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~ 368 (489)
T PLN02936 290 GHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRP-PTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPG 368 (489)
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCC-CCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccC
Confidence 99999999999999999999999999999999886432 221
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCC--CcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEID--VKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||+..... ....+..|+|||+|+|.|||++||++|+++++++
T Consensus 369 g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ 445 (489)
T PLN02936 369 GYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAV 445 (489)
T ss_pred CeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999864321 1122458999999999999999999999999873
No 26
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.97 E-value=2.5e-29 Score=209.88 Aligned_cols=172 Identities=18% Similarity=0.283 Sum_probs=130.6
Q ss_pred ChhHHhHHHHHHHHHHHHHHHHhhhhcCCCCcceehHHHHhcc-------------------------------------
Q 036053 3 TKNQLDASQAIRHKRCNNYSTMCIKVARGVRRSVDIGQAAFTT------------------------------------- 45 (184)
Q Consensus 3 s~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~------------------------------------- 45 (184)
++++++.+.+.+.+++-+.+..... ++.+|+.+++..+
T Consensus 151 ~~~~l~~~~~~i~~~v~~~~~~~~~-----~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (490)
T PLN02302 151 GPEALSTYIPYIEENVKSCLEKWSK-----MGEIEFLTELRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRAMAI 225 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCc
Confidence 5788999999998888434443332 3358888877766
Q ss_pred --C--hHHHHHHHHHHHHHHHHHHHHHHHhhh-cC---CC-C------------------Ccc----------cccchHH
Q 036053 46 --G--SRKRMTVYFLRMFKIFDGIIDERLQVK-ES---LM-N------------------SEV----------RTDTTSR 88 (184)
Q Consensus 46 --~--~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~---~~-D------------------~~i----------g~dtts~ 88 (184)
+ ..++..++...+.+++.+.|+++++.. .+ .. | ++| |+|||++
T Consensus 226 ~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~ 305 (490)
T PLN02302 226 NLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGH 305 (490)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHH
Confidence 0 122344556778888888888886542 11 00 1 122 9999999
Q ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHhcCCC---C-CCc-----------------------------------------
Q 036053 89 TVEWAVAEFLHNPKVLTTAQNELRELLGNDG---K-VDR----------------------------------------- 123 (184)
Q Consensus 89 ~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~---~-~~~----------------------------------------- 123 (184)
+++|++++|++||++|+||++|++++++... . ++.
T Consensus 306 ~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~I 385 (490)
T PLN02302 306 LTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTI 385 (490)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEE
Confidence 9999999999999999999999999875421 0 110
Q ss_pred -----------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 -----------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 -----------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++||||++|+||++|+||||++.. ..+..++|||+|+|.|+|++||.+|+++++++
T Consensus 386 p~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ 452 (490)
T PLN02302 386 PKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHH 452 (490)
T ss_pred CCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHH
Confidence 899999999999999999998643 23568999999999999999999999999873
No 27
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.97 E-value=3.6e-29 Score=207.30 Aligned_cols=131 Identities=22% Similarity=0.313 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-cC------CC-C---------------Ccc----------cccchHHHHHHHHH
Q 036053 49 KRMTVYFLRMFKIFDGIIDERLQVK-ES------LM-N---------------SEV----------RTDTTSRTVEWAVA 95 (184)
Q Consensus 49 ~~~~~~~~~~~~~~~~~i~~r~~~~-~~------~~-D---------------~~i----------g~dtts~~l~~~l~ 95 (184)
++..++.+++.+++.++|+++++.. .+ .+ | ++| |+|||+++++|+++
T Consensus 197 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~ 276 (452)
T PLN03141 197 YRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVK 276 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 4455678899999999998887653 11 01 1 222 99999999999999
Q ss_pred HHhhChHHHHHHHHHHHHHhcC----CCCCCc------------------------------------------------
Q 036053 96 EFLHNPKVLTTAQNELRELLGN----DGKVDR------------------------------------------------ 123 (184)
Q Consensus 96 ~L~~~p~~~~kl~~Ei~~~~~~----~~~~~~------------------------------------------------ 123 (184)
+|++||++|+||++|++++.+. ...++.
T Consensus 277 ~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~ 356 (452)
T PLN03141 277 FLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVL 356 (452)
T ss_pred HHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEE
Confidence 9999999999999999887531 111110
Q ss_pred ----ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ----AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ----~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++|+||++|+||++|+||||++... .++.|+|||+|+|.|+|++||++|+++++|+
T Consensus 357 ~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ 416 (452)
T PLN03141 357 AYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHH 416 (452)
T ss_pred EehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 9999999999999999999997532 3568999999999999999999999999874
No 28
>PLN03018 homomethionine N-hydroxylase
Probab=99.96 E-value=6.2e-29 Score=209.57 Aligned_cols=102 Identities=27% Similarity=0.574 Sum_probs=87.8
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCCCCc--------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELLGNDGKVDR-------------------------------------- 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~-------------------------------------- 123 (184)
|+|||+++++|++++|++||++|+||++||+++++....++.
T Consensus 326 G~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~ 405 (534)
T PLN03018 326 AIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLG 405 (534)
T ss_pred hhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeEC
Confidence 999999999999999999999999999999999875433221
Q ss_pred ---------------ccccCCCCCCCCCCCCCCcccCCCCCC-----cCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 ---------------AMGSDSNIWQNPISFVHESFLDSEIDV-----KGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ---------------~~~~d~~~~~~p~~F~PeR~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++|+||++|+||++|+||||++..... ...+..|+|||+|+|.|+|++||++|+++++|+
T Consensus 406 G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ 485 (534)
T PLN03018 406 GYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLAR 485 (534)
T ss_pred CEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 899999999999999999998653211 123567999999999999999999999999874
No 29
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=8.3e-29 Score=202.87 Aligned_cols=167 Identities=18% Similarity=0.232 Sum_probs=131.2
Q ss_pred CCChhHHhHHHHHHHHHHHHHHHHhhhhcCCCCcceehHHHHhcc-----------------------------------
Q 036053 1 MFTKNQLDASQAIRHKRCNNYSTMCIKVARGVRRSVDIGQAAFTT----------------------------------- 45 (184)
Q Consensus 1 ~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~----------------------------------- 45 (184)
.|+++.+++|.|.+.+.+.+.+... . .+..+++.+.+..+
T Consensus 109 ~F~~~~~~~~~~~i~~~~~~~~~~~-~----~~~~~~v~~~a~~l~~~vi~~l~Gv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (411)
T COG2124 109 AFTPRALRGYRPLIREIADRLLDDL-W----QGGADLVLDFAAELTLRVIAELLGVPLEDRPQLLRWSDALLLRLDPDLG 183 (411)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhc-c----cCCchhHHHHhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcccC
Confidence 3899999999999988885555544 3 33556666666665
Q ss_pred --ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cC------------C---CCCcc----------cccchHHHHHHHHHHH
Q 036053 46 --GSRKRMTVYFLRMFKIFDGIIDERLQVK-ES------------L---MNSEV----------RTDTTSRTVEWAVAEF 97 (184)
Q Consensus 46 --~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~------------~---~D~~i----------g~dtts~~l~~~l~~L 97 (184)
....+..++...+.+++.++|++|+... ++ + +|++| |+|||+++|+|++|.|
T Consensus 184 ~~~~~~~~~~a~~~~~~~~~~li~~rR~~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L 263 (411)
T COG2124 184 PEEPWRRARAARRELDAYLRALIAERRAAPRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYAL 263 (411)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 1256678999999999999999998542 10 0 02233 9999999999999999
Q ss_pred hhChHHHHHHHHHHHH-----HhcC-----------CCCCCc--------------------ccccCCCCCCCCCCCCCC
Q 036053 98 LHNPKVLTTAQNELRE-----LLGN-----------DGKVDR--------------------AMGSDSNIWQNPISFVHE 141 (184)
Q Consensus 98 ~~~p~~~~kl~~Ei~~-----~~~~-----------~~~~~~--------------------~~~~d~~~~~~p~~F~Pe 141 (184)
++||++++++++|.+. ++.. .+.... ++||||++|++|++|+|+
T Consensus 264 ~~~P~~~~~l~~e~~~~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~ 343 (411)
T COG2124 264 LRHPDQLAKLRAEPDRPLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPE 343 (411)
T ss_pred HHCchHHHHHHhCcchHHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCC
Confidence 9999999999998774 2211 000000 999999999999999999
Q ss_pred cccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhc
Q 036053 142 SFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLT 182 (184)
Q Consensus 142 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la 182 (184)
||. ..++|||+|+|.|+|.+||++|++++++
T Consensus 344 R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~ 374 (411)
T COG2124 344 RFN----------NAHLPFGGGPHRCLGAALARLELKVALA 374 (411)
T ss_pred CCC----------CCCcCCCCCCccccCHHHHHHHHHHHHH
Confidence 994 4799999999999999999999999875
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=3.6e-27 Score=188.54 Aligned_cols=137 Identities=23% Similarity=0.374 Sum_probs=113.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cCC-C----------------CCcc----------cccchHHHHHHHHHHH
Q 036053 46 GSRKRMTVYFLRMFKIFDGIIDERLQVK-ESL-M----------------NSEV----------RTDTTSRTVEWAVAEF 97 (184)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~-~----------------D~~i----------g~dtts~~l~~~l~~L 97 (184)
+..++..++++++.+.+.++|.+|++.. ..+ + |+++ |..||+.|..|++++|
T Consensus 221 ~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yL 300 (486)
T KOG0684|consen 221 PLLRRRDRARKKISKIFSKIILDRRASISKWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYL 300 (486)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 4567777999999999999999998865 111 1 1333 9999999999999999
Q ss_pred hhChHHHHHHHHHHHHHhcCCCC-CCc-----------------------------------------------------
Q 036053 98 LHNPKVLTTAQNELRELLGNDGK-VDR----------------------------------------------------- 123 (184)
Q Consensus 98 ~~~p~~~~kl~~Ei~~~~~~~~~-~~~----------------------------------------------------- 123 (184)
++||++++.+++|+.+++|.... .+.
T Consensus 301 l~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~val 380 (486)
T KOG0684|consen 301 LRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVAL 380 (486)
T ss_pred hhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEe
Confidence 99999999999999999987544 221
Q ss_pred ---ccccCCCCCCCCCCCCCCcccCCCCCC----cCCCCceeecCCCCCCCCCHHHHHHHHHHhhc
Q 036053 124 ---AMGSDSNIWQNPISFVHESFLDSEIDV----KGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLT 182 (184)
Q Consensus 124 ---~~~~d~~~~~~p~~F~PeR~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la 182 (184)
.+|+||++|++|+.|+|+||++++... ..-.+.++|||+|.|.|||+.||.+|++.+++
T Consensus 381 sP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~ 446 (486)
T KOG0684|consen 381 SPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFIS 446 (486)
T ss_pred ccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHH
Confidence 889999999999999999999766433 12245679999999999999999999999875
No 31
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.94 E-value=1e-26 Score=193.58 Aligned_cols=136 Identities=18% Similarity=0.226 Sum_probs=109.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhh-cC--C-CC--------------Ccc----------cccchHHHHHHHHHHHh
Q 036053 47 SRKRMTVYFLRMFKIFDGIIDERLQVK-ES--L-MN--------------SEV----------RTDTTSRTVEWAVAEFL 98 (184)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~--~-~D--------------~~i----------g~dtts~~l~~~l~~L~ 98 (184)
..++..++++++.+++.++|+++++.. .+ . .| ++| |+|||+++++|++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~ 295 (472)
T PLN02987 216 TYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLT 295 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 356778889999999999999987753 11 1 11 222 99999999999999999
Q ss_pred hChHHHHHHHHHHHHHhcCC---CCCCc----------------------------------------------------
Q 036053 99 HNPKVLTTAQNELRELLGND---GKVDR---------------------------------------------------- 123 (184)
Q Consensus 99 ~~p~~~~kl~~Ei~~~~~~~---~~~~~---------------------------------------------------- 123 (184)
+||++|+|+++|++.+.+.. ..++.
T Consensus 296 ~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~ 375 (472)
T PLN02987 296 ETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFR 375 (472)
T ss_pred hChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehH
Confidence 99999999999999887421 11110
Q ss_pred ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHHHHHHHHHHhhcc
Q 036053 124 AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLPLAHRMAHLMLTF 183 (184)
Q Consensus 124 ~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 183 (184)
++|+||++|+||++|+||||++.... ......++|||+|+|.|+|++||++|++++++.
T Consensus 376 ~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ 434 (472)
T PLN02987 376 AVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHR 434 (472)
T ss_pred HhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHH
Confidence 89999999999999999999865321 123467999999999999999999999999873
No 32
>PLN02648 allene oxide synthase
Probab=99.91 E-value=1.5e-23 Score=174.50 Aligned_cols=99 Identities=14% Similarity=0.171 Sum_probs=78.0
Q ss_pred cccchHHHHHHHHHHHhhChH-HHHHHHHHHHHHhcC-CCCCCc------------------------------------
Q 036053 82 RTDTTSRTVEWAVAEFLHNPK-VLTTAQNELRELLGN-DGKVDR------------------------------------ 123 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~-~~~kl~~Ei~~~~~~-~~~~~~------------------------------------ 123 (184)
+++|++++++|++|+|++||+ +|+||++||+.+++. ...++.
T Consensus 284 t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l 363 (480)
T PLN02648 284 AFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVI 363 (480)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEE
Confidence 466667899999999999995 999999999999852 111211
Q ss_pred --------------------ccccCCCCCCCCCCCCCCcccCCCCCCcCCCCceee---------cCCCCCCCCCHHHHH
Q 036053 124 --------------------AMGSDSNIWQNPISFVHESFLDSEIDVKGRDFQLIP---------LGAGRRIYPGLPLAH 174 (184)
Q Consensus 124 --------------------~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A~ 174 (184)
++||||++|+||++|+|+||+++... ....+++ ||+|+|.|+|++||+
T Consensus 364 ~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~ 440 (480)
T PLN02648 364 ESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVV 440 (480)
T ss_pred ecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHH
Confidence 88999999999999999999864321 1123333 467889999999999
Q ss_pred HHHHHhhcc
Q 036053 175 RMAHLMLTF 183 (184)
Q Consensus 175 ~~~~~~la~ 183 (184)
+|++++++.
T Consensus 441 ~e~~~~la~ 449 (480)
T PLN02648 441 LVARLFVAE 449 (480)
T ss_pred HHHHHHHHH
Confidence 999999873
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=71.66 E-value=2.9 Score=24.66 Aligned_cols=9 Identities=22% Similarity=0.099 Sum_probs=6.8
Q ss_pred CCCCcccCC
Q 036053 138 FVHESFLDS 146 (184)
Q Consensus 138 F~PeR~l~~ 146 (184)
-||||||.-
T Consensus 43 PDPERWLP~ 51 (59)
T PF08492_consen 43 PDPERWLPK 51 (59)
T ss_pred CCccccCch
Confidence 388999854
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=63.58 E-value=8.2 Score=22.61 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=16.5
Q ss_pred HHHHHHHhhChHHHHHHHHH
Q 036053 91 EWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 91 ~~~l~~L~~~p~~~~kl~~E 110 (184)
.-.+.+|..||++.+||.+.
T Consensus 3 Q~iV~YLv~nPevl~kl~~g 22 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKEG 22 (57)
T ss_pred HHHHHHHHHChHHHHHHHcC
Confidence 34678999999999999763
No 35
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=57.81 E-value=3.5 Score=29.95 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=25.0
Q ss_pred CCCCCcccCCCCCCcCCCCceeecCCCCCCCCCHH
Q 036053 137 SFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGLP 171 (184)
Q Consensus 137 ~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 171 (184)
+|+|++|-.---....+...++-|..|.=.|.|-+
T Consensus 36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence 78888884322223345668999999999999853
No 36
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=56.43 E-value=5.1 Score=23.09 Aligned_cols=11 Identities=27% Similarity=0.404 Sum_probs=9.3
Q ss_pred eecCCCCCCCC
Q 036053 158 IPLGAGRRIYP 168 (184)
Q Consensus 158 ~~Fg~G~r~C~ 168 (184)
-+||-|+|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 57999999985
No 37
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=51.64 E-value=24 Score=22.81 Aligned_cols=29 Identities=28% Similarity=0.352 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 036053 87 SRTVEWAVAEFLHNPKVLTTAQNELRELL 115 (184)
Q Consensus 87 s~~l~~~l~~L~~~p~~~~kl~~Ei~~~~ 115 (184)
..++.|.++-.-..|+..+-|++||+++-
T Consensus 53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 53 LFTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 34677888888889999999999999874
No 38
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=46.29 E-value=5 Score=29.26 Aligned_cols=35 Identities=9% Similarity=0.232 Sum_probs=25.5
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCH
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGL 170 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~ 170 (184)
-+|+|+||-.--.....+.-..+-|+.|.=.|.|-
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 47999998543333344556789999999999875
No 39
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=40.95 E-value=56 Score=17.31 Aligned_cols=21 Identities=5% Similarity=0.238 Sum_probs=14.3
Q ss_pred HHHHHHHHHh-hChHHHHHHHH
Q 036053 89 TVEWAVAEFL-HNPKVLTTAQN 109 (184)
Q Consensus 89 ~l~~~l~~L~-~~p~~~~kl~~ 109 (184)
.+...+..++ +||++++.++.
T Consensus 14 qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 14 QLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHhChhHHHHHHh
Confidence 4555555555 89999887764
No 40
>PRK00394 transcription factor; Reviewed
Probab=37.36 E-value=9.2 Score=27.99 Aligned_cols=34 Identities=12% Similarity=0.257 Sum_probs=25.2
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCC
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPG 169 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G 169 (184)
-+|+|+||-.--.....+.-..+-|..|.=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 4799999854333334455678999999999998
No 41
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=37.08 E-value=1e+02 Score=19.43 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=27.6
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELRELL 115 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~~~~ 115 (184)
-+.+++....-.+.+-++||+..+++++.+..-+
T Consensus 45 Ky~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 45 KYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred HcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 5666777888888888999999999998877654
No 42
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=35.15 E-value=69 Score=19.35 Aligned_cols=23 Identities=4% Similarity=0.010 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhhChHHHHHHHHH
Q 036053 88 RTVEWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 88 ~~l~~~l~~L~~~p~~~~kl~~E 110 (184)
...+-.+--++|+||.+.+++.-
T Consensus 21 ~v~~~a~e~iaRqPE~~~~i~~~ 43 (66)
T PRK13467 21 FLMANLFKSAARQPEMIGQLRSL 43 (66)
T ss_pred HHHHHHHHHHHcChhHHHhHHHH
Confidence 44556677899999999999863
No 43
>PLN00062 TATA-box-binding protein; Provisional
Probab=34.58 E-value=8.7 Score=28.13 Aligned_cols=35 Identities=9% Similarity=0.258 Sum_probs=24.9
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCCH
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGL 170 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~ 170 (184)
-+|+||+|-.--.....+....+-|+.|.=.|.|-
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGa 63 (179)
T PLN00062 29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 63 (179)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEec
Confidence 58999998433323334456789999999999884
No 44
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=33.57 E-value=55 Score=17.67 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=15.5
Q ss_pred HHHHHHHHhhChHHHHHHH
Q 036053 90 VEWAVAEFLHNPKVLTTAQ 108 (184)
Q Consensus 90 l~~~l~~L~~~p~~~~kl~ 108 (184)
-.|.++-++++|++|.-|.
T Consensus 12 gl~gl~~~l~DpdvqrgL~ 30 (42)
T PF07849_consen 12 GLFGLLRALRDPDVQRGLG 30 (42)
T ss_pred CHHHHHHHHcCHHHHHHHH
Confidence 3577888999999998774
No 45
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=33.54 E-value=62 Score=18.19 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=27.7
Q ss_pred cccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 036053 82 RTDTTSRTVEWAVAEFLHNPKVLTTAQNELR 112 (184)
Q Consensus 82 g~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~ 112 (184)
|.|..+..++..|.+.--||+....+-.|++
T Consensus 18 gLd~etL~ici~L~e~GVnPeaLA~vI~elr 48 (48)
T PF12554_consen 18 GLDRETLSICIELCENGVNPEALAAVIKELR 48 (48)
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence 8888888999999999999999999888874
No 46
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=32.95 E-value=10 Score=27.57 Aligned_cols=34 Identities=9% Similarity=0.255 Sum_probs=24.6
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCC
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPG 169 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G 169 (184)
-+|+||||-.--.....+.-..+-|+.|.=.|.|
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitG 62 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITG 62 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEe
Confidence 4788999854333333455678999999999988
No 47
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=32.85 E-value=20 Score=20.74 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=10.9
Q ss_pred ecCCCCCCCC--CHHHH
Q 036053 159 PLGAGRRIYP--GLPLA 173 (184)
Q Consensus 159 ~Fg~G~r~C~--G~~~A 173 (184)
-||.|+|.|. |..-|
T Consensus 11 ~yGkGsr~C~vCg~~~g 27 (54)
T PTZ00218 11 TYGKGSRQCRVCSNRHG 27 (54)
T ss_pred cCCCCCCeeecCCCcch
Confidence 5899999997 54433
No 48
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=31.78 E-value=29 Score=26.16 Aligned_cols=19 Identities=11% Similarity=0.162 Sum_probs=17.4
Q ss_pred ccccCCCCCCCCCCCCCCc
Q 036053 124 AMGSDSNIWQNPISFVHES 142 (184)
Q Consensus 124 ~~~~d~~~~~~p~~F~PeR 142 (184)
.-|.|+.+|.|...|+|-|
T Consensus 193 ~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 193 PDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCcccccCccccCCCC
Confidence 6689999999999999987
No 49
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=30.81 E-value=73 Score=16.00 Aligned_cols=15 Identities=20% Similarity=0.512 Sum_probs=11.7
Q ss_pred ChHHHHHHHHHHHHH
Q 036053 100 NPKVLTTAQNELREL 114 (184)
Q Consensus 100 ~p~~~~kl~~Ei~~~ 114 (184)
.|..-.+|++||.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 578888999998865
No 50
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=30.05 E-value=83 Score=18.39 Aligned_cols=22 Identities=5% Similarity=-0.083 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhChHHHHHHHH
Q 036053 88 RTVEWAVAEFLHNPKVLTTAQN 109 (184)
Q Consensus 88 ~~l~~~l~~L~~~p~~~~kl~~ 109 (184)
...+-.+--++|+|+...+++.
T Consensus 11 ~i~~~a~~~iaRqPe~~~~l~~ 32 (58)
T TIGR01260 11 ILGGKFLESAARQPELKPLLRT 32 (58)
T ss_pred HHHHHHHHHHHcChhHHHhHHH
Confidence 4455667789999999999975
No 51
>PF07818 HCNGP: HCNGP-like protein; InterPro: IPR012479 This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP (Q02614 from SWISSPROT). This protein is localised to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.
Probab=29.34 E-value=78 Score=20.61 Aligned_cols=11 Identities=27% Similarity=0.516 Sum_probs=9.3
Q ss_pred hChHHHHHHHH
Q 036053 99 HNPKVLTTAQN 109 (184)
Q Consensus 99 ~~p~~~~kl~~ 109 (184)
+||.+.+||.+
T Consensus 41 rNP~i~ekLi~ 51 (96)
T PF07818_consen 41 RNPSILEKLIE 51 (96)
T ss_pred CChHHHHHHHH
Confidence 68999999876
No 52
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=28.00 E-value=13 Score=27.02 Aligned_cols=34 Identities=9% Similarity=0.276 Sum_probs=24.3
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCC
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPG 169 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G 169 (184)
-+|+||+|-.--.....+....+-|+.|.=.|.|
T Consensus 29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTG 62 (174)
T cd04516 29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTG 62 (174)
T ss_pred CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEe
Confidence 5899999843322333445568999999999988
No 53
>PRK13466 F0F1 ATP synthase subunit C; Provisional
Probab=26.66 E-value=1.1e+02 Score=18.51 Aligned_cols=23 Identities=9% Similarity=0.039 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhChHHHHHHHHH
Q 036053 88 RTVEWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 88 ~~l~~~l~~L~~~p~~~~kl~~E 110 (184)
....-.+--++|+||.+.|++.-
T Consensus 21 ~~~~~~~e~vaRqPea~~~l~~~ 43 (66)
T PRK13466 21 LLVASYLSSTARQPEMQSKLMAG 43 (66)
T ss_pred HHHHHHHHHHHcChhHHHhHHHH
Confidence 34455667889999999999863
No 54
>PF13040 DUF3901: Protein of unknown function (DUF3901)
Probab=25.96 E-value=1e+02 Score=16.59 Aligned_cols=20 Identities=15% Similarity=0.388 Sum_probs=16.0
Q ss_pred HHHhhChHHHHHHHHHHHHH
Q 036053 95 AEFLHNPKVLTTAQNELREL 114 (184)
Q Consensus 95 ~~L~~~p~~~~kl~~Ei~~~ 114 (184)
-.|+++|+.+++|.+-|++-
T Consensus 17 ~ell~d~~~me~Ieerie~k 36 (40)
T PF13040_consen 17 QELLNDKEAMEKIEERIEEK 36 (40)
T ss_pred HHHHcCHHHHHHHHHHHHHH
Confidence 46888999999998877753
No 55
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=24.99 E-value=25 Score=26.28 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=21.7
Q ss_pred CceeecCCCCCCCCCHHHHHHHHHH
Q 036053 155 FQLIPLGAGRRIYPGLPLAHRMAHL 179 (184)
Q Consensus 155 ~~~~~Fg~G~r~C~G~~~A~~~~~~ 179 (184)
...+..|.|+-.|+|++||++.+.+
T Consensus 40 gkv~V~G~GkSG~Igkk~Aa~L~s~ 64 (202)
T COG0794 40 GKVFVTGVGKSGLIGKKFAARLAST 64 (202)
T ss_pred CcEEEEcCChhHHHHHHHHHHHHcc
Confidence 4578899999999999999987754
No 56
>PF04798 Baculo_19: Baculovirus 19 kDa protein conserved region; InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=24.38 E-value=19 Score=25.43 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=14.2
Q ss_pred CceeecCCCCCCCCCHHHH
Q 036053 155 FQLIPLGAGRRIYPGLPLA 173 (184)
Q Consensus 155 ~~~~~Fg~G~r~C~G~~~A 173 (184)
+.++- |++.|.||+..+|
T Consensus 58 YyYle-gss~~~CP~nE~a 75 (146)
T PF04798_consen 58 YYYLE-GSSSVFCPPNEFA 75 (146)
T ss_pred EEEEe-ccccccCCCCceE
Confidence 45677 8999999977665
No 57
>PF10264 Stork_head: Winged helix Storkhead-box1 domain; InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=24.37 E-value=1.8e+02 Score=18.29 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhhC--hHHHHHHHHHHHHHhcCCCCCC
Q 036053 87 SRTVEWAVAEFLHN--PKVLTTAQNELRELLGNDGKVD 122 (184)
Q Consensus 87 s~~l~~~l~~L~~~--p~~~~kl~~Ei~~~~~~~~~~~ 122 (184)
+-.|+|++..|... +--++.|++.+...+++-..|+
T Consensus 13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps 50 (80)
T PF10264_consen 13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPS 50 (80)
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCC
Confidence 56899999988764 4579999999999987544443
No 58
>PRK05880 F0F1 ATP synthase subunit C; Validated
Probab=24.09 E-value=1.3e+02 Score=19.04 Aligned_cols=24 Identities=4% Similarity=-0.031 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhhChHHHHHHHHH
Q 036053 87 SRTVEWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 87 s~~l~~~l~~L~~~p~~~~kl~~E 110 (184)
....+-++--++|+||...+++.-
T Consensus 29 G~v~~~a~eaiaRqPEa~~~l~~~ 52 (81)
T PRK05880 29 GVAGNALISGVARQPEAQGRLFTP 52 (81)
T ss_pred HHHHHHHHHHHHcChhHHHhHHHH
Confidence 344556677899999999999863
No 59
>KOG3392 consensus Exon-exon junction complex, Magoh component [RNA processing and modification]
Probab=23.37 E-value=85 Score=21.18 Aligned_cols=30 Identities=20% Similarity=0.452 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhcCCCCCCcccccCCCCCCCCCCC
Q 036053 105 TTAQNELRELLGNDGKVDRAMGSDSNIWQNPISF 138 (184)
Q Consensus 105 ~kl~~Ei~~~~~~~~~~~~~~~~d~~~~~~p~~F 138 (184)
+.+.+|+.+.+.+.. .+.-|.+.||.|++-
T Consensus 55 e~vl~e~kriv~dse----i~kedd~nwp~pd~~ 84 (147)
T KOG3392|consen 55 ESVLEELKRIIDDSE----IMKEDDANWPPPDRV 84 (147)
T ss_pred HHHHHHHHHHhhhhh----hhhccccCCcCCCcc
Confidence 445566666654332 445678899998654
No 60
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=23.01 E-value=82 Score=15.90 Aligned_cols=15 Identities=27% Similarity=0.341 Sum_probs=12.2
Q ss_pred CCceeecCCCCCCCC
Q 036053 154 DFQLIPLGAGRRIYP 168 (184)
Q Consensus 154 ~~~~~~Fg~G~r~C~ 168 (184)
.-.|+|+.|..|.|.
T Consensus 17 ~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 17 DNTYQPYDGPRRFCR 31 (31)
T ss_pred CCcEeCCCCccccCc
Confidence 347999998889995
No 61
>PF00352 TBP: Transcription factor TFIID (or TATA-binding protein, TBP); InterPro: IPR000814 The TATA-box binding protein (TBP) is required for the initiation of transcription by RNA polymerases I, II and III, from promoters with or without a TATA box [, ]. TBP associates with a host of factors, including the general transcription factors TFIIA, -B, -D, -E, and -H, to form huge multi-subunit pre-initiation complexes on the core promoter. Through its association with different transcription factors, TBP can initiate transcription from different RNA polymerases. There are several related TBPs, including TBP-like (TBPL) proteins []. The C-terminal core of TBP (~180 residues) is highly conserved and contains two 77-amino acid repeats that produce a saddle-shaped structure that straddles the DNA; this region binds to the TATA box and interacts with transcription factors and regulatory proteins []. By contrast, the N-terminal region varies in both length and sequence.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0006367 transcription initiation from RNA polymerase II promoter; PDB: 1D3U_A 1PCZ_B 1AIS_A 1NGM_A 1TBP_A 1TBA_B 1YTB_A 1RM1_A 1YTF_A 1NH2_A ....
Probab=22.53 E-value=8.9 Score=24.25 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=22.3
Q ss_pred CCCCCcccCCCCCCcCCCCceeecCCCCCCCCCH
Q 036053 137 SFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPGL 170 (184)
Q Consensus 137 ~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~ 170 (184)
+|+||+|-.--.....+....+-|..|.=.|.|-
T Consensus 32 ~YePe~fpgl~~r~~~p~~t~~IF~sGki~itGa 65 (86)
T PF00352_consen 32 EYEPERFPGLIYRLRNPKATVLIFSSGKIVITGA 65 (86)
T ss_dssp EEETTTESSEEEEETTTTEEEEEETTSEEEEEEE
T ss_pred EEeeccCCeEEEeecCCcEEEEEEcCCEEEEEec
Confidence 6888887332222223455678999998888874
No 62
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.49 E-value=26 Score=26.00 Aligned_cols=34 Identities=9% Similarity=0.273 Sum_probs=24.0
Q ss_pred CCCCCCcccCCCCCCcCCCCceeecCCCCCCCCC
Q 036053 136 ISFVHESFLDSEIDVKGRDFQLIPLGAGRRIYPG 169 (184)
Q Consensus 136 ~~F~PeR~l~~~~~~~~~~~~~~~Fg~G~r~C~G 169 (184)
.+|+|.||-.--+....+.....-|+.|.=.|.|
T Consensus 50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctg 83 (200)
T KOG3302|consen 50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTG 83 (200)
T ss_pred cccCcccccEEEEEEcCCceEEEEecCCcEEEec
Confidence 4699999854433333345567899999999996
No 63
>TIGR03272 methan_mark_6 putative methanogenesis marker protein 6. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=22.33 E-value=98 Score=21.43 Aligned_cols=19 Identities=32% Similarity=0.574 Sum_probs=15.1
Q ss_pred cCCCCCCCCCHHHHHHHHHHh
Q 036053 160 LGAGRRIYPGLPLAHRMAHLM 180 (184)
Q Consensus 160 Fg~G~r~C~G~~~A~~~~~~~ 180 (184)
-|+||| +|-+.=..|++++
T Consensus 77 RGGgPR--pGFhqle~E~~~L 95 (132)
T TIGR03272 77 RGGGPR--PGFHQLEAEVELL 95 (132)
T ss_pred cCCCCC--CChHHHHHHHHHH
Confidence 457889 9999888888764
No 64
>PRK07558 F0F1 ATP synthase subunit C; Validated
Probab=21.25 E-value=1.5e+02 Score=18.35 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhhChHHHHHHHH
Q 036053 88 RTVEWAVAEFLHNPKVLTTAQN 109 (184)
Q Consensus 88 ~~l~~~l~~L~~~p~~~~kl~~ 109 (184)
....-.+--++|+||...+++.
T Consensus 27 ~~~~~a~e~iaRqPe~~~~l~~ 48 (74)
T PRK07558 27 NIFGNYLSGALRNPSAADSQFG 48 (74)
T ss_pred HHHHHHHHHHHcCchHHHhHHH
Confidence 3445566788999999999875
No 65
>PRK06876 F0F1 ATP synthase subunit C; Validated
Probab=21.12 E-value=1.6e+02 Score=18.45 Aligned_cols=22 Identities=9% Similarity=0.058 Sum_probs=16.9
Q ss_pred HHHHHHHHHhhChHHHHHHHHH
Q 036053 89 TVEWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 89 ~l~~~l~~L~~~p~~~~kl~~E 110 (184)
..+-++--++|+||.+.+++.-
T Consensus 30 ~~~~a~~~iaRqPe~~~~l~~~ 51 (78)
T PRK06876 30 LGGKFLEGAARQPELIPMLQTK 51 (78)
T ss_pred HHHHHHHHHHcChHHHHhHHHH
Confidence 3445567889999999999863
No 66
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=20.83 E-value=1e+02 Score=19.87 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=15.5
Q ss_pred ChHHHHHHHHHHHHHhcC
Q 036053 100 NPKVLTTAQNELRELLGN 117 (184)
Q Consensus 100 ~p~~~~kl~~Ei~~~~~~ 117 (184)
.|++.++|++||-+|+..
T Consensus 41 ~pd~L~~lk~eIl~VI~K 58 (90)
T PRK13990 41 SSHLLAELKDEIIEVVKK 58 (90)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 478999999999999854
No 67
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=20.74 E-value=2.7e+02 Score=18.50 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 036053 46 GSRKRMTVYFLRMFKIFDGIIDERLQVKESLMNSEVRTDTTSRTVEWAVAEFLHNPKVLTTAQNELR 112 (184)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~D~~ig~dtts~~l~~~l~~L~~~p~~~~kl~~Ei~ 112 (184)
+......++++..+++..+-+++|.+.. .|+-+++|++||.
T Consensus 63 Ty~~Q~k~Ye~a~~~~~~~~lqkRle~l--------------------------~~eE~~~L~~eie 103 (104)
T PF11460_consen 63 TYMQQRKDYEEAVDQLTNEELQKRLEEL--------------------------SPEELEALQAEIE 103 (104)
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHhC--------------------------CHHHHHHHHHHhc
Confidence 4555666667777777777777777654 5677777777775
No 68
>MTH00222 ATP9 ATP synthase F0 subunit 9; Provisional
Probab=20.08 E-value=1.8e+02 Score=18.14 Aligned_cols=23 Identities=9% Similarity=0.082 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhhChHHHHHHHHH
Q 036053 88 RTVEWAVAEFLHNPKVLTTAQNE 110 (184)
Q Consensus 88 ~~l~~~l~~L~~~p~~~~kl~~E 110 (184)
....-.+--++|+||...+++.-
T Consensus 29 ~~~~~~~e~vaRqPe~~~~l~~~ 51 (77)
T MTH00222 29 TVFGNLIIGYARNPSLKQQLFTY 51 (77)
T ss_pred HHHHHHHHHHHcChhhHHhHHHH
Confidence 44455667889999999999863
Done!