BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036054
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WG8|A Chain A, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
Length = 129
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 39 CSRTCVAENCNSVGI-RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG--LTNIK 95
CSRTC ++ C + RYGKYCG+ +SG PGE+PCD LDACC +HD CVD N
Sbjct: 18 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 77
Query: 96 CHEKFKRCIKKV 107
C+E CI +V
Sbjct: 78 CNENLLSCIDRV 89
>pdb|2WG8|B Chain B, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
pdb|2WG8|C Chain C, Structure Of Oryza Sativa (Rice) Pla2, Orthorhombic
Crystal Form
Length = 129
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 39 CSRTCVAENCNSVGI-RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG--LTNIK 95
CSRTC ++ C + RYGKYCG+ +SG PGE+PCD LDACC +HD CVD N
Sbjct: 18 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 77
Query: 96 CHEKFKRCIKKV 107
C+E CI +V
Sbjct: 78 CNENLLSCIDRV 89
>pdb|2WG7|A Chain A, Structure Of Oryza Sativa (Rice) Pla2
pdb|2WG7|B Chain B, Structure Of Oryza Sativa (Rice) Pla2
pdb|2WG9|A Chain A, Structure Of Oryza Sativa (Rice) Pla2, Complex With
Octanoic Acid
pdb|2WG9|B Chain B, Structure Of Oryza Sativa (Rice) Pla2, Complex With
Octanoic Acid
Length = 130
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 39 CSRTCVAENCNSVGI-RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG--LTNIK 95
CSRTC ++ C + RYGKYCG+ +SG PGE+PCD LDACC +HD CVD N
Sbjct: 19 CSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTM 78
Query: 96 CHEKFKRCIKKV 107
C+E CI +V
Sbjct: 79 CNENLLSCIDRV 90
>pdb|1AE7|A Chain A, Notexin, A Presynaptic Neurotoxic Phospholipase A2
pdb|4E4C|A Chain A, Crystal Structure Of Notexin At 1.8 A Resolution
Length = 119
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG 90
+ YG YCG G SG P DELD CCKIHD+C D+ G
Sbjct: 23 MDYGCYCGAGGSG----TPVDELDRCCKIHDDCYDEAG 56
>pdb|1P7O|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|E Chain E, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
pdb|1P7O|F Chain F, Crystal Structure Of Phospholipase A2 (Mipla4) From
Micropechis Ikaheka
Length = 124
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P DELD CC+ HD C DK
Sbjct: 25 YGCYCGKGGSG----TPVDELDRCCQTHDNCYDK 54
>pdb|3ELO|A Chain A, Crystal Structure Of Human Pancreatic Prophospholipase
A2
Length = 133
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG+G SG P DELD CC+ HD C D+
Sbjct: 31 NYGCYCGLGGSG----TPVDELDKCCQTHDNCYDQ 61
>pdb|1PWO|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|B Chain B, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|C Chain C, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
pdb|1PWO|D Chain D, Crystal Structure Of Phospholipase A2 (Mipla2) From
Micropechis Ikaheka
Length = 124
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P DELD CC+ HD C DK
Sbjct: 25 YGCYCGKGGSG----TPVDELDRCCQTHDNCYDK 54
>pdb|2NOT|A Chain A, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
pdb|2NOT|B Chain B, Notechis Ii-5, Neurotoxic Phospholipase A2 From Notechis
Scutatus Scutatus
Length = 119
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDEC---VDKKGLT 92
+ YG YCG G SG P DELD CCKIHD+C +KKG +
Sbjct: 23 MDYGCYCGWGGSG----TPVDELDRCCKIHDDCYSDAEKKGCS 61
>pdb|3V9M|A Chain A, Phospholipase Acii4 From Australian King Brown Snake
pdb|3V9M|B Chain B, Phospholipase Acii4 From Australian King Brown Snake
Length = 118
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 18/65 (27%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKFGNVG 114
YG YCG G SG P DELD CC++HD C ++ G K C K+
Sbjct: 25 YGCYCGWGGSG----TPVDELDRCCQVHDNCYEQAGK---------KGCFPKL-----TL 66
Query: 115 FSWKC 119
+SWKC
Sbjct: 67 YSWKC 71
>pdb|1OZY|A Chain A, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
pdb|1OZY|B Chain B, Crystal Structure Of Phospholipase A2 (mipla3) From
Micropechis Ikaheka
Length = 121
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P DELD CC+ HD C DK
Sbjct: 25 YGCYCGKGGSG----TPVDELDRCCQTHDYCYDK 54
>pdb|1HN4|A Chain A, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
pdb|1HN4|B Chain B, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate,
And Calcium
Length = 131
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLTNIK 95
YG YCG+G SG P DELD CC+ HD C D K L + K
Sbjct: 31 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 69
>pdb|1FX9|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FX9|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Sulphate Ions)
pdb|1FXF|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1FXF|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33
Inhibitor + Phosphate Ions)
pdb|1L8S|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|1L8S|B Chain B, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Lpc-
Ether + Acetate + Phosphate Ions)
pdb|2AZY|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Cholate
pdb|2AZZ|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurocholate
pdb|2B00|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycocholate
pdb|2B01|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B03|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Taurochenodeoxycholate
pdb|2B04|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With Glycochenodeoxycholate
pdb|1P2P|A Chain A, Structure Of Porcine Pancreatic Phospholipase A2 At 2.6
Angstroms Resolution And Comparison With Bovine
Phospholipase A2
pdb|1PIR|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1PIS|A Chain A, Solution Structure Of Porcine Pancreatic Phospholipase
A2
pdb|1SFV|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, Minimized
Average Structure
pdb|1SFW|A Chain A, Porcine Pancreas Phospholipase A2, Nmr, 18 Structures
pdb|4P2P|A Chain A, An Independent Crystallographic Refinement Of Porcine
Phospholipase A2 At 2.4 Angstroms Resolution
pdb|3HSW|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 2-Methoxycyclohexa-2-5-Diene-1,4-Dione
pdb|3L30|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Dihydroxyberberine
pdb|3FVI|A Chain A, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|B Chain B, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|C Chain C, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVI|D Chain D, Crystal Structure Of Complex Of Phospholipase A2 With
Octyl Sulfates
pdb|3FVJ|A Chain A, Crystal Structure Of Phospholipase A2 1b Crystallized In
The Presence Of Octyl Sulfate
pdb|3O4M|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With 1,2-Dihydroxybenzene
pdb|3QLM|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
In Complex With N-Hexadecanoic Acid
pdb|4DBK|A Chain A, Crystal Structure Of Porcine Pancreatic Phospholipase A2
Complexed With Berberine
pdb|4G5I|A Chain A, Crystal Structure Of Porcine Pancreatic Pla2 In Complex
With Dbp
Length = 124
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLTNIK 95
YG YCG+G SG P DELD CC+ HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 62
>pdb|2PHI|A Chain A, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
pdb|2PHI|B Chain B, A Large Conformational Change Is Found In The Crystal
Structure Of The Porcine Pancreatic Phospholipase A2
Point Mutant F63v
Length = 124
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLTNIK 95
YG YCG+G SG P DELD CC+ HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLDSCK 62
>pdb|3P2P|A Chain A, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
pdb|3P2P|B Chain B, Enhanced Activity And Altered Specificity Of
Phospholipase A2 By Deletion Of A Surface Loop
Length = 119
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLT 92
YG YCG+G SG P DELD CC+ HD C D K L+
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDNCYRDAKNLS 59
>pdb|3VC0|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 1
Length = 118
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
+ YG YCG G SG P D+LD CC++HDEC
Sbjct: 23 MNYGCYCGKGGSG----TPVDDLDRCCQVHDEC 51
>pdb|1FE5|A Chain A, Sequence And Crystal Structure Of A Basic Phospholipase A2
From Common Krait (Bungarus Caeruleus) At 2.4
Resolution: Identification And Characterization Of Its
Pharmacological Sites
Length = 118
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKF 110
+ YG YCG G SG P DELD CC HD C ++ EK C ++ +
Sbjct: 21 VNYGCYCGKGGSG----TPVDELDRCCYTHDNCYNEA--------EKIPGCNPNIKTY 66
>pdb|1DPY|A Chain A, Three-Dimensional Structure Of A Novel Phospholipase A2
From Indian Common Krait At 2.45 A Resolution
Length = 118
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKF 110
+ YG YCG G SG P DELD CC HD C ++ EK C ++ +
Sbjct: 21 VAYGCYCGKGGSG----TPVDELDRCCYTHDHCYNEA--------EKIPGCNPNIKTY 66
>pdb|3GCI|A Chain A, Crystal Structure Of The Complex Formed Between A New
Isoform Of Phospholipase A2 With C-Terminal Amyloid Beta
Heptapeptide At 2 A Resolution
Length = 119
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK-CHEKFK 101
YG YCG G SG P D+LD CC+ HD C ++ NI C KFK
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE--AENISGCRPKFK 65
>pdb|1GP7|A Chain A, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|B Chain B, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
pdb|1GP7|C Chain C, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah
Length = 151
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG G SG P D+LD CC++HD C
Sbjct: 52 YGCYCGAGGSG----TPVDKLDRCCQVHDNC 78
>pdb|5P2P|A Chain A, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
pdb|5P2P|B Chain B, X-Ray Structure Of Phospholipase A2 Complexed With A
Substrate-Derived Inhibitor
Length = 119
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLT 92
YG YCG G SG P DELD CC+ HD C D K L+
Sbjct: 24 NYGCYCGWGGSG----TPVDELDRCCETHDNCYRDAKNLS 59
>pdb|1MH2|A Chain A, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVD 87
YG YCG G SG P D+LD+CC++HD C +
Sbjct: 24 YGCYCGRGGSG----TPIDDLDSCCQVHDNCYN 52
>pdb|1Y6O|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6O|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancreatic Phospholipase A2 To Group-X Isozyme In
Complex With Inhibitor Mj33 And Phosphate Ions
pdb|1Y6P|A Chain A, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
pdb|1Y6P|B Chain B, Crystal Structure Of Disulfide Engineered Porcine
Pancratic Phospholipase A2 To Group-x Isozyme
Length = 131
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECV-DKKGLTNIK 95
YG YCG+G SG P DELD CC+ HD C D K L + K
Sbjct: 24 NYGCYCGLGGSG----TPVDELDRCCETHDCCYRDAKNLDSCK 62
>pdb|1BUN|A Chain A, Structure Of Beta2-Bungarotoxin: Potassium Channel Binding
By Kunitz Modules And Targeted Phospholipase Action
Length = 120
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 12/56 (21%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKF 110
YG YCG G SG +P D LD CC +HD C EK +C K Q +
Sbjct: 25 YGCYCGAGGSG----RPIDALDRCCYVHDNCYGDA--------EKKHKCNPKTQSY 68
>pdb|1G2X|A Chain A, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|B Chain B, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|1G2X|C Chain C, Sequence Induced Trimerization Of Krait Pla2: Crystal
Structure Of The Trimeric Form Of Krait Pla2
pdb|2OSN|A Chain A, An Alternate Description Of A Crystal Structure Of
Phospholipase A2 From Bungarus Caeruleus
Length = 118
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
I YG YCG G SG P D+LD CC HD C ++
Sbjct: 21 INYGCYCGKGGSG----TPVDKLDRCCYTHDHCYNQ 52
>pdb|2BCH|A Chain A, A Possible Of Second Calcium Ion In Interfacial Binding:
Atomic And Medium Resolution Crystal Structures Of The
Quadruple Mutant Of Phospholipase A2
pdb|2BD1|A Chain A, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
pdb|2BD1|B Chain B, A Possible Role Of The Second Calcium Ion In Interfacial
Binding: Atomic And Medium Resolution Crystal
Structures Of The Quadruple Mutant Of Phospholipase A2
Length = 123
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1YXH|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera With A Strong Anticoagulant Activity
Length = 126
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 31 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNQ 60
>pdb|1MKS|A Chain A, Carboxylic Ester Hydrolase, Trigonal Form Of The Triple
Mutant
pdb|1MKU|A Chain A, Carboxylic Ester Hydrolase, Orthorhombic Form Of The
Triple Mutant
Length = 123
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKFGNV 113
YG YCG+G SG P D+LD CC+ HD C + +K C V
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNCFKQA--------KKLDSCKVLVDNPYTN 71
Query: 114 GFSWKCPYDTVV 125
FS+ C + +
Sbjct: 72 NFSYSCSNNEIT 83
>pdb|1VL9|A Chain A, Atomic Resolution (0.97a) Structure Of The Triple Mutant
(K53,56,121m) Of Bovine Pancreatic Phospholipase A2
pdb|2B96|A Chain A, Third Calcium Ion Found In An Inhibitor Bound
Phospholipase A2
Length = 123
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1O2E|A Chain A, Structure Of The Triple Mutant (K53,56,120m) + Anisic
Acid Complex Of Phospholipase A2
pdb|1O3W|A Chain A, Structure Of The Inhibitor Free Triple Mutant
(K53,56,120m) Of Phospholipase A2
pdb|1VKQ|A Chain A, A Re-Determination Of The Structure Of The Triple Mutant
(K53,56,120m) Of Phospholipase A2 At 1.6a Resolution
Using Sulphur-Sas At 1.54a Wavelength
Length = 123
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1GH4|A Chain A, Structure Of The Triple Mutant (K56m, K120m, K121m) Of
Phospholipase A2
Length = 123
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1C74|A Chain A, Structure Of The Double Mutant (K53,56m) Of
Phospholipase A2
pdb|2BAX|A Chain A, Atomic Resolution Structure Of The Double Mutant
(K53,56m) Of Bovine Pancreatic Phospholipase A2
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|4BP2|A Chain A, Crystallographic Refinement Of Bovine Pro-Phospholipase
A2 At 1.6 Angstroms Resolution
Length = 130
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 31 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 58
>pdb|1S6B|B Chain B, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|B Chain B, Structure Of Zinc Induced Heterodimer Of Two Calcium Free
Isoforms Of Phospholipase A2 From Naja Naja Sagittifera
At 2.7a Resolution
pdb|2RD4|B Chain B, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of The Complex Of Phospholipase A2 With
Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A Resolution
Length = 119
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFK 101
YG YCG G SG P D+LD CC++HD C ++ + C+ +F+
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNEAEKIS-GCNPRFR 65
>pdb|2BP2|A Chain A, The Structure Of Bovine Pancreatic Prophospholipase A2
At 3.0 Angstroms Resolution
Length = 130
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 31 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 58
>pdb|1OXR|A Chain A, Aspirin Induces Its Anti-inflammatory Effects Through
Its Specific Binding To Phospholipase A2: Crystal
Structure Of The Complex Formed Between Phospholipase
A2 And Aspirin At 1.9a Resolution
pdb|1SZ8|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 From
Naja Naja Sagittifera At 1.5 A Resolution
pdb|1TD7|A Chain A, Interactions Of A Specific Non-steroidal
Anti-inflammatory Drug (nsaid) With Group I
Phospholipase A2 (pla2): Crystal Structure Of The
Complex Formed Between Pla2 And Niflumic Acid At 2.5 A
Resolution
pdb|1YXL|A Chain A, Crystal Structure Of A Novel Phospholipase A2 From Naja
Naja Sagittifera At 1.5 A Resolution
Length = 119
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1IRB|A Chain A, Carboxylic Ester Hydrolase
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1BPQ|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1KVX|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D99a Of Bovine
Pancreatic Pla2, 1.9 A Orthorhombic Form
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1CEH|A Chain A, Structure And Function Of The Catalytic Site Mutant
Asp99asn Of Phospholipase A2: Absence Of Conserved
Structural Water
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1BVM|A Chain A, Solution Nmr Structure Of Bovine Pancreatic
Phospholipase A2, 20 Structures
pdb|1G4I|A Chain A, Crystal Structure Of The Bovine Pancreatic Phospholipase
A2 At 0.97a
pdb|1BP2|A Chain A, Structure Of Bovine Pancreatic Phospholipase A2 At 1.7
Angstroms Resolution
pdb|1FDK|A Chain A, Carboxylic Ester Hydrolase (Pla2-Mj33 Inhibitor Complex)
pdb|1MKT|A Chain A, Carboxylic Ester Hydrolase, 1.72 Angstrom Trigonal Form
Of The Bovine Recombinant Pla2 Enzyme
pdb|1MKV|A Chain A, Carboxylic Ester Hydrolase Complex (Pla2 + Transition
State Analog Complex)
pdb|1UNE|A Chain A, Carboxylic Ester Hydrolase, 1.5 Angstrom Orthorhombic
Form Of The Bovine Recombinant Pla2
pdb|2BPP|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And
Functional Evidence For The Interaction Of Lysine-56
With Substrates
Length = 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|3BP2|A Chain A, Role Of The N-Terminus In The Interaction Of Pancreatic
Phospholipase A2 With Aggregated Substrates. Properties
And Crystal Structure Of Transaminated Phospholipase A2
Length = 123
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ HD C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHDNC 51
>pdb|1MH2|B Chain B, Crystal Structure Of A Zinc Containing Dimer Of
Phospholipase A2 From The Venom Of Indian Cobra (Naja
Naja Sagittifera)
Length = 119
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 12/56 (21%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKF 110
YG YCG G SG P D+LD CC+ HD C ++ EK C + + +
Sbjct: 24 YGCYCGRGGSGTPS----DDLDRCCQTHDNCYNEA--------EKISGCNPRFRTY 67
>pdb|2WQ5|A Chain A, Non-Antibiotic Properties Of Tetracyclines: Structural
Basis For Inhibition Of Secretory Phospholipase A2
Length = 119
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1POB|A Chain A, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POB|B Chain B, Crystal Structure Of Cobra-Venom Phospholipase A2 In A
Complex With A Transition-State Analogue
pdb|1POA|A Chain A, Interfacial Catalysis: The Mechanism Of Phospholipase A2
Length = 118
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|2OSH|A Chain A, Crystal Structure Of Natratoxin, A Snake Spla2 That
Blocks A-Type K+ Channel
Length = 119
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1S6B|A Chain A, X-ray Crystal Structure Of A Complex Formed Between Two
Homologous Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera: Principle Of Molecular Association And
Inactivation
pdb|1XXW|A Chain A, Structure Of Zinc Induced Heterodimer Of Two Calcium
Free Isoforms Of Phospholipase A2 From Naja Naja
Sagittifera At 2.7a Resolution
pdb|2RD4|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipase A2
With Pentapeptide Leu-Val-Phe-Phe-Ala At 2.9 A
Resolution
Length = 119
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVD 87
YG YCG G SG P D+LD CC++HD C +
Sbjct: 24 YGCYCGRGGSG----TPIDDLDRCCQVHDNCYN 52
>pdb|1PSH|A Chain A, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|B Chain B, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1PSH|C Chain C, Crystal Structure Of Phospholipase A2 From Indian Cobra
Reveals A Trimeric Association
pdb|1A3F|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|B Chain B, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3F|C Chain C, Phospholipase A2 (Pla2) From Naja Naja Venom
pdb|1A3D|A Chain A, Phospholipase A2 (Pla2) From Naja Naja Venom
Length = 119
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC++HD C ++
Sbjct: 24 YGCYCGRGGSG----TPVDDLDRCCQVHDNCYNE 53
>pdb|1LN8|A Chain A, Crystal Structure Of A New Isoform Of Phospholipase A2
From Naja Naja Sagittifera At 1.6 A Resolution
pdb|1MF4|A Chain A, Structure-Based Design Of Potent And Selective
Inhibitors Of Phospholipase A2: Crystal Structure Of
The Complex Formed Between Phosholipase A2 From Naja
Naja Sagittifera And A Designed Peptide Inhibitor At
1.9 A Resolution
pdb|3JQ5|A Chain A, Phospholipase A2 Prevents The Aggregation Of Amyloid
Beta Peptides: Crystal Structure Of The Complex Of
Phospholipase A2 With Octapeptide Fragment Of Amyloid
Beta Peptide, Asp- Ala-Glu-Phe-Arg-His-Asp-Ser At 2 A
Resolution
pdb|3JQL|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And A Hexapeptide Fragment Of Amyloid
Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala At 1.2 A
Resolution
pdb|3NJU|A Chain A, Crystal Structure Of The Complex Of Group I
Phospholipase A2 With 4- Methoxy-Benzoicacid At 1.4a
Resolution
pdb|3JTI|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 With Beta-Amyloid Fragment,
Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met At 1.8 A Resolution
pdb|3OSH|A Chain A, Crystal Structure Of The Complex Of Group 1
Phospholipase A2 With Atropin At 1.5 A Resolution
pdb|3Q4Y|A Chain A, Crystal Structure Of Group I Phospholipase A2 At 2.3 A
Resolution In 40% Ethanol Revealed The Critical
Elements Of Hydrophobicity Of The Substrate-Binding
Site
Length = 119
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC+ HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE 53
>pdb|1T37|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Formed Between Group I
Phospholipase A2 And A Designed Pentapeptide
Leu-Ala-Ile- Tyr-Ser At 2.6a Resolution
pdb|1ZM6|A Chain A, Crystal Structure Of The Complex Formed Beween A Group I
Phospholipase A2 And Designed Penta Peptide
Leu-ala-ile- Tyr-ser At 2.6a Resolution
Length = 119
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G SG P D+LD CC+ HD C ++
Sbjct: 24 YGCYCGKGGSG----TPVDDLDRCCQTHDNCYNE 53
>pdb|2ZP3|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ H+ C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHNNC 51
>pdb|1KVY|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49e
Coordinated To Calcium
Length = 123
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ H+ C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHENC 51
>pdb|1PO8|A Chain A, Crystal Structure Of A Complex Formed Between Krait
Venom Phospholipase A2 And Heptanoic Acid At 2.7 A
Resolution.
pdb|1TC8|A Chain A, Crystal Structure Of Krait-Venom Phospholipase A2 In A
Complex With A Natural Fatty Acid Tridecanoic Acid
Length = 118
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVD 87
YG YCG G SG P D+LD CC HD C +
Sbjct: 21 TNYGCYCGKGGSG----TPVDDLDRCCYTHDHCYN 51
>pdb|3VBZ|A Chain A, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
pdb|3VBZ|B Chain B, Crystal Structure Of Taipoxin Beta Subunit Isoform 2
Length = 118
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
+ YG YCG G P D+LD CC++HDEC
Sbjct: 23 MNYGCYCGTVGRG----TPVDDLDRCCQVHDEC 51
>pdb|1Y75|B Chain B, A New Form Of Catalytically Inactive Phospholipase A2
With An Unusual Disulphide Bridge Cys 32- Cys 49
Reveals Recognition For N- Acetylglucosmine
Length = 118
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG 90
YG YCG G SG P D+LD CC++HD C + G
Sbjct: 24 YGCYCGSG-SG----SPVDDLDRCCQVHDNCYNAGG 54
>pdb|2ZP4|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48n Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ +D C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTNDNC 51
>pdb|2ZP5|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49k Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ H C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTHKNC 51
>pdb|1KVW|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48q Of Bovine
Pancreatic Pla2 Enzyme
Length = 123
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG+G SG P D+LD CC+ D C
Sbjct: 24 NYGCYCGLGGSG----TPVDDLDRCCQTQDNC 51
>pdb|1OWS|B Chain B, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG 90
YG YCG G SG P D+LD CC+ HD C G
Sbjct: 24 YGCYCGSG-SG----SPTDDLDRCCQTHDNCYGAGG 54
>pdb|1OWS|A Chain A, Crystal Structure Of A C49 Phospholipase A2 From Indian
Cobra Reveals Carbohydrate Binding In The Hydrophobic
Channel
Length = 118
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFK 101
YG YCG G SG P D+LD CC++H C + G + C KFK
Sbjct: 24 YGCYCGCG-SG----TPTDDLDRCCQVHCNCYRQAGEIS-GCRPKFK 64
>pdb|1Y75|A Chain A, A New Form Of Catalytically Inactive Phospholipase A2 With
An Unusual Disulphide Bridge Cys 32- Cys 49 Reveals
Recognition For N- Acetylglucosmine
Length = 118
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFK 101
YG YCG G SG P D+LD CC++H C + G + C KFK
Sbjct: 24 YGCYCGCG-SG----TPVDDLDRCCQVHCNCYRQAGEIS-GCRPKFK 64
>pdb|2QOG|A Chain A, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|D Chain D, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
YG YCG G G +P D D CC +HD C K N K
Sbjct: 24 YGCYCGWGGQG----RPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|1UMV|X Chain X, Crystal Structure Of An Acidic, Non-Myotoxic
Phospholipase A2 From The Venom Of Bothrops Jararacussu
pdb|1ZL7|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase
A2 With Bound Calcium
pdb|1ZLB|A Chain A, Crystal Structure Of Catalytically-Active Phospholipase
A2 In The Absence Of Calcium
Length = 122
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
+ YG YCG+G G +P D D CC +HD C K
Sbjct: 22 LSYGCYCGLGGQG----QPTDATDRCCFVHDCCYGK 53
>pdb|3R0L|D Chain D, Crystal Structure Of Crotoxin
Length = 122
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
YG YCG G G +P D D CC +HD C K N K
Sbjct: 24 YGCYCGWGGQG----RPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|1VIP|A Chain A, Anticoagulant Class Ii Phospholipase A2 From The Venom
Of Vipera Russelli Russelli
Length = 121
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G KP D D CC +HD C +K
Sbjct: 24 YGCYCGWGGKG----KPQDATDRCCFVHDCCYEK 53
>pdb|2QOG|B Chain B, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus.
pdb|2QOG|C Chain C, Crotoxin B, The Basic Pla2 From Crotalus Durissus
Terrificus
Length = 122
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
YG YCG G G +P D D CC +HD C K N K
Sbjct: 24 YGCYCGWGGRG----RPKDATDRCCFVHDCCYGKLAKCNTK 60
>pdb|1U73|A Chain A, Crystal Structure Of A Dimeric Acidic Platelet
Aggregation Inhibitor And Hypotensive Phospholipase A2
From Bothrops Jararacussu
pdb|1U73|B Chain B, Crystal Structure Of A Dimeric Acidic Platelet
Aggregation Inhibitor And Hypotensive Phospholipase A2
From Bothrops Jararacussu
pdb|1Z76|A Chain A, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
pdb|1Z76|B Chain B, Crystal Structure Of An Acidic Phospholipase A2 (Btha-I)
From Bothrops Jararacussu Venom Complexed With P-
Bromophenacyl Bromide
Length = 122
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
+ YG YCG+G G +P D D CC +HD C K
Sbjct: 22 LSYGCYCGLGGQG----QPTDATDRCCFVHDCCYGK 53
>pdb|2OQD|A Chain A, Crystal Structure Of Bthtx-Ii
pdb|2OQD|B Chain B, Crystal Structure Of Bthtx-Ii
pdb|3JR8|A Chain A, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
pdb|3JR8|B Chain B, Crystal Structure Of Bthtx-Ii (Asp49-Pla2 From Bothrops
Jararacussu Snake Venom) With Calcium Ions
Length = 122
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
YG YCG G G P D D CC +HD C K LTN K
Sbjct: 24 YGCYCGWGGQGQPK----DATDRCCFVHDCCYGK--LTNCK 58
>pdb|1GMZ|A Chain A, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai.
pdb|1GMZ|B Chain B, Crystal Structure Of The D49 Phospholipase A2 Piratoxin
Iii From Bothrops Pirajai
Length = 122
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
+ YG YCGVG G P D D CC +HD C K
Sbjct: 22 VTYGCYCGVGGRGGPK----DATDRCCFVHDCCYGK 53
>pdb|1JIA|A Chain A, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1JIA|B Chain B, Structure Of A Basic Phospholipase A2 From Agkistrodon
Halys Pallas At 2.13a Resolution
pdb|1B4W|A Chain A, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|B Chain B, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|C Chain C, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
pdb|1B4W|D Chain D, Basic Phospholipase A2 From Agkistrodon Halys Pallas-
Implications For Its Association And Anticoagulant
Activities By X-Ray Crystallography
Length = 122
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G KP D D CC +HD C +K
Sbjct: 24 YGCYCGSGGRG----KPKDATDRCCFVHDCCYEK 53
>pdb|2I0U|E Chain E, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
pdb|2I0U|A Chain A, Crystal Structures Of Phospholipases A2 From Vipera
Nikolskii Venom Revealing Triton X-100 Bound In
Hydrophobic Channel
Length = 122
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
I YG YCG G G P D D CC +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|1JLT|B Chain B, Vipoxin Complex
pdb|1RGB|A Chain A, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|B Chain B, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|K Chain K, Phospholipase A2 From Vipera Ammodytes Meridionalis
pdb|1RGB|L Chain L, Phospholipase A2 From Vipera Ammodytes Meridionalis
Length = 122
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
I YG YCG G G P D D CC +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|3G8G|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin A From
Vipera Ammodytes Ammodytes
Length = 122
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCGVG G P D D CC +HD C
Sbjct: 24 YGCYCGVGGKGTPK----DATDRCCFVHDCC 50
>pdb|3G8H|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin C From
Vipera Ammodytes Ammodytes
Length = 122
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCGVG G P D D CC +HD C
Sbjct: 24 YGCYCGVGGKGTPK----DATDRCCFVHDCC 50
>pdb|4HG9|A Chain A, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|B Chain B, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|C Chain C, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
pdb|4HG9|D Chain D, Crystal Structure Of Ahv_bpa, A Basic Pla2 From
Agkistrodon Halys Pallas Venom
Length = 122
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G KP D D CC +HD C +K
Sbjct: 24 YGCYCGSGGRG----KPKDATDRCCFVHDCCYEK 53
>pdb|1AOK|B Chain B, Vipoxin Complex
Length = 122
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
I YG YCG G G P D D CC +HD C +
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYGR 53
>pdb|1LE6|A Chain A, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|B Chain B, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE6|C Chain C, Carboxylic Ester Hydrolase, P 1 21 1 Space Group
pdb|1LE7|A Chain A, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
pdb|1LE7|B Chain B, Carboxylic Ester Hydrolase, C 2 2 21 Space Group
Length = 123
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 18/83 (21%)
Query: 43 CVAENCNSVGIRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKR 102
CV ++YG +CG+G G +P D +D CC HD C + C K +R
Sbjct: 11 CVGPRTPIAYMKYGCFCGLGGHG----QPRDAIDWCCHGHDCCYTRA--EEAGCSPKTER 64
Query: 103 CIKKVQKFGNVGFSWKCPYDTVV 125
+SW+C +V+
Sbjct: 65 ------------YSWQCVNQSVL 75
>pdb|1TGM|A Chain A, Crystal Structure Of A Complex Formed Between Group Ii
Phospholipase A2 And Aspirin At 1.86 A Resolution
pdb|1TJK|A Chain A, Crystal Structure Of The Complex Formed Between Group Ii
Phospholipase A2 With A Designed Pentapeptide, Phe- Leu-
Ser- Thr- Lys At 1.2 A Resolution
Length = 121
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHE-KFKR 102
YG YCG G SG P D D CC +HD C N K K+KR
Sbjct: 24 YGCYCGWGGSGTPK----DATDRCCFVHDCCYGNLPDCNPKSDRYKYKR 68
>pdb|1OQS|B Chain B, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|D Chain D, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|F Chain F, Crystal Structure Of Rv4RV7 COMPLEX
pdb|1OQS|H Chain H, Crystal Structure Of Rv4RV7 COMPLEX
Length = 122
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
I YG YCG G G P D D CC +HD C
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCC 50
>pdb|1N29|A Chain A, Crystal Structure Of The N1a Mutant Of Human Group Iia
Phospholipase A2
Length = 124
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKFGNVG 114
YG +CGVG G P D D CC HD C K L C KF KF N G
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTHDCCY--KRLEKRGCGTKF-----LSYKFSNSG 72
Query: 115 FSWKC 119
C
Sbjct: 73 SRITC 77
>pdb|1POE|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1POE|B Chain B, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|1AYP|A Chain A, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|B Chain B, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|C Chain C, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|D Chain D, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|E Chain E, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1AYP|F Chain F, A Probe Molecule Composed Of Seventeen Percent Of Total
Diffracting Matter Gives Correct Solutions In Molecular
Replacement
pdb|1KVO|A Chain A, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|B Chain B, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|C Chain C, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|D Chain D, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|E Chain E, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1KVO|F Chain F, Human Phospholipase A2 Complexed With A Highly Potent
Substrate Anologue
pdb|1DCY|A Chain A, Crystal Structure Of Human S-Pla2 In Complex With Indole 3
Active Site Inhibitor
pdb|1DB4|A Chain A, Human S-Pla2 In Complex With Indole 8
pdb|1DB5|A Chain A, Human S-Pla2 In Complex With Indole 6
pdb|1J1A|A Chain A, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1J1A|B Chain B, Pancreatic Secretory Phospholipase A2 (Iia) With Anti-
Inflammatory Activity
pdb|1KQU|A Chain A, Human Phospholipase A2 Complexed With A Substrate Anologue
pdb|1BBC|A Chain A, Structure Of Recombinant Human Rheumatoid Arthritic
Synovial Fluid Phospholipase A2 At 2.2 Angstroms
Resolution
pdb|1POD|A Chain A, Structures Of Free And Inhibited Human Secretory
Phospholipase A2 From Inflammatory Exudate
pdb|3U8B|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8D|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8H|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
Length = 124
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKF 100
YG +CGVG G P D D CC HD C K L C KF
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTHDCCY--KRLEKRGCGTKF 63
>pdb|1POC|A Chain A, Crystal Structure Of Bee-venom Phospholipase A2 In A
Complex With A Transition-state Analogue
Length = 134
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 15/47 (31%)
Query: 74 ELDACCKIHDECVD-------KKGLTNIKCH--------EKFKRCIK 105
DACC+ HD C D K GLTN H +KF C+K
Sbjct: 26 HTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDDKFYDCLK 72
>pdb|2H4C|A Chain A, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|C Chain C, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|E Chain E, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|G Chain G, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
Length = 122
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG G G KP D D CC +HD C
Sbjct: 24 YGCYCGWGGQG----KPQDATDRCCFVHDCC 50
>pdb|1G0Z|A Chain A, Specific Mutations In Krait Pla2 Lead To Dimerization Of
Protein Molecules: Crystal Structure Of Krait Pla2 At
2.1 Resolution
pdb|1G0Z|B Chain B, Specific Mutations In Krait Pla2 Lead To Dimerization Of
Protein Molecules: Crystal Structure Of Krait Pla2 At
2.1 Resolution
pdb|1U4J|A Chain A, Crystal Structure Of A Carbohydrate Induced Dimer Of
Group I Phospholipase A2 From Bungarus Caeruleus At 2.1
A Resolution
pdb|1U4J|B Chain B, Crystal Structure Of A Carbohydrate Induced Dimer Of
Group I Phospholipase A2 From Bungarus Caeruleus At 2.1
A Resolution
Length = 118
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 71 PCDELDACCKIHDECVDKKG 90
P DELD CC HD C +K
Sbjct: 35 PVDELDRCCYTHDHCYNKAA 54
>pdb|2H4C|B Chain B, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|D Chain D, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|F Chain F, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
pdb|2H4C|H Chain H, Structure Of Daboiatoxin (Heterodimeric Pla2 Venom)
Length = 122
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 53 IRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
I YG YCG G G P D D CC +HD C + N K
Sbjct: 22 ISYGCYCGWGGQGTPK----DATDRCCFVHDCCYARVKGCNPK 60
>pdb|1PP2|R Chain R, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
pdb|1PP2|L Chain L, The Refined Crystal Structure Of Dimeric Phospholipase
A2 At 2.5 Angstroms. Access To A Shielded Catalytic
Center
Length = 122
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIK 95
YG YCG G G P D D CC +HD C K N K
Sbjct: 24 YGCYCGWGGHGLPQ----DATDRCCFVHDCCYGKATDCNPK 60
>pdb|1BJJ|A Chain A, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|B Chain B, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|C Chain C, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|D Chain D, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|E Chain E, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
pdb|1BJJ|F Chain F, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic
Neurotoxin From Agkistrodon Halys Pallas
Length = 122
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G KP D D CC +HD C +
Sbjct: 24 YGCYCGWGGQG----KPKDGTDRCCFVHDCCYGR 53
>pdb|1VAP|A Chain A, The Monomeric Asp49 Secretory Phospholipase A2 From The
Venom Of Agkistridon Piscivorus Piscivorus
pdb|1VAP|B Chain B, The Monomeric Asp49 Secretory Phospholipase A2 From The
Venom Of Agkistridon Piscivorus Piscivorus
Length = 123
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G +P D D CC +HD C K
Sbjct: 24 YGCYCGWGGQG----RPKDATDRCCFVHDCCYGK 53
>pdb|1MH7|A Chain A, Crystal Structure Of A Calcium-Free Isoform Of
Phospholipase A2 From Naja Naja Sagittifera At 2.0 A
Resolution
Length = 119
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 71 PCDELDACCKIHDECVDK 88
P D+LD CC++HD C ++
Sbjct: 36 PTDDLDRCCQVHDNCYNQ 53
>pdb|1MH8|A Chain A, Crystal Structure Of A Phopholipase A2 Monomer With
Isoleucine At Second Position
Length = 119
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 71 PCDELDACCKIHDECVDK 88
P D+LD CC++HD C ++
Sbjct: 36 PTDDLDRCCQVHDNCYNQ 53
>pdb|1C1J|A Chain A, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|B Chain B, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|C Chain C, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
pdb|1C1J|D Chain D, Structure Of Cadmium-Substituted Phospholipase A2 From
Agkistrondon Halys Pallas At 2.8 Angstroms Resolution
Length = 122
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G KP + D CC +HD C +K
Sbjct: 24 YGCYCGSGGRG----KPKNATDRCCFVHDCCYEK 53
>pdb|1BK9|A Chain A, Phospholipase A2 Modified By Pbpb
pdb|1PSJ|A Chain A, Acidic Phospholipase A2 From Agkistrodon Halys Pallas
Length = 124
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G +P D D CC +HD C K
Sbjct: 23 NYGCYCGWGGQG----RPQDATDRCCFVHDCCYGK 53
>pdb|1M8R|A Chain A, Crystal Structures Of Cadmium-Binding Acidic
Phospholipase A2 From The Venom Of Agkistrodon Halys
Pallas At 1.9 Resolution (Crystal Grown At Ph 7.4)
pdb|1M8S|A Chain A, Crystal Structures Of Cadmium-Binding Acidic
Phospholipase A2 From The Venom Of Agkistrodon Halys
Pallas At 1.9 Resolution (Crystal Grown At Ph 5.9)
Length = 124
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G +P D D CC +HD C K
Sbjct: 23 NYGCYCGWGGQG----RPQDATDRCCFVHDCCYGK 53
>pdb|1M8T|A Chain A, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
pdb|1M8T|B Chain B, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
pdb|1M8T|C Chain C, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
pdb|1M8T|D Chain D, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
pdb|1M8T|E Chain E, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
pdb|1M8T|F Chain F, Structure Of An Acidic Phospholipase A2 From The Venom
Of Ophiophagus Hannah At 2.1 Resolution From A
Hemihedrally Twinned Crystal Form
Length = 119
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 71 PCDELDACCKIHDEC 85
P DELD CC++HD C
Sbjct: 37 PVDELDRCCQVHDNC 51
>pdb|1OZ6|A Chain A, X-ray Structure Of Acidic Phospholipase A2 From Indian
Saw- Scaled Viper (echis Carinatus) With A Potent
Platelet Aggregation Inhibitory Activity
Length = 120
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKG 90
YG YCG G G P D D CC +HD C + G
Sbjct: 24 YGCYCGWGGQGPPK----DATDRCCLVHDCCYTRVG 55
>pdb|3P94|A Chain A, Crystal Structure Of A Gdsl-Like Lipase (Bdi_0976) From
Parabacteroides Distasonis Atcc 8503 At 1.93 A
Resolution
pdb|3P94|B Chain B, Crystal Structure Of A Gdsl-Like Lipase (Bdi_0976) From
Parabacteroides Distasonis Atcc 8503 At 1.93 A
Resolution
pdb|3P94|C Chain C, Crystal Structure Of A Gdsl-Like Lipase (Bdi_0976) From
Parabacteroides Distasonis Atcc 8503 At 1.93 A
Resolution
pdb|3P94|D Chain D, Crystal Structure Of A Gdsl-Like Lipase (Bdi_0976) From
Parabacteroides Distasonis Atcc 8503 At 1.93 A
Resolution
Length = 204
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 67 PGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFK 101
PG +P D++ K E DK GLT + H K
Sbjct: 132 PGXQPADKVIQLNKWIKEYADKNGLTYVDYHSAXK 166
>pdb|4H0S|A Chain A, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|B Chain B, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
pdb|4H0S|C Chain C, Crystal Structure Analysis Of A Basic Phospholipase A2
From Trimeresurus Stejnegeri Venom
Length = 137
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 54 RYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
+YG CG+ G KP D D CC IH+ C K
Sbjct: 39 KYGCNCGMAGRG----KPVDATDTCCSIHNCCYGK 69
>pdb|1IJL|A Chain A, Crystal Structure Of Acidic Phospholipase A2 From
Deinagkistrodon Acutus
pdb|1IJL|B Chain B, Crystal Structure Of Acidic Phospholipase A2 From
Deinagkistrodon Acutus
Length = 123
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G +P D D CC +HD C K
Sbjct: 24 YGCYCGWGGHG----RPQDATDRCCFVHDCCYGK 53
>pdb|1OYF|B Chain B, Crystal Structure Of Russelles Viper (Daboia Russellii
Pulchella) Phospholipase A2 In A Complex With Venom 6-
Methyl Heptanol
Length = 121
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHE-KFKR 102
YG YCG G G P D D CC +HD C N K K+KR
Sbjct: 24 YGCYCGWGGKGTPK----DATDRCCFVHDCCYGNLPDCNPKSDRYKYKR 68
>pdb|1CL5|A Chain A, Crystal Structure Of Phospholipase A2 From Daboia Russelli
Pulchella
pdb|1CL5|B Chain B, Crystal Structure Of Phospholipase A2 From Daboia Russelli
Pulchella
pdb|1FB2|A Chain A, Structure Of Phospholipase A2 From Daboia Russelli
Pulchella At 1.95
pdb|1FB2|B Chain B, Structure Of Phospholipase A2 From Daboia Russelli
Pulchella At 1.95
pdb|1KPM|A Chain A, First Structural Evidence Of A Specific Inhibition Of
Phospholipase A2 By Vitamin E And Its Implications In
Inflammation: Crystal Structure Of The Complex Formed
Between Phospholipase A2 And Vitamin E At 1.8 A
Resolution.
pdb|1KPM|B Chain B, First Structural Evidence Of A Specific Inhibition Of
Phospholipase A2 By Vitamin E And Its Implications In
Inflammation: Crystal Structure Of The Complex Formed
Between Phospholipase A2 And Vitamin E At 1.8 A
Resolution.
pdb|1FV0|A Chain A, First Structural Evidence Of The Inhibition Of
Phospholipase A2 By Aristolochic Acid: Crystal Structure
Of A Complex Formed Between Phospholipase A2 And
Aristolochic Acid
pdb|1FV0|B Chain B, First Structural Evidence Of The Inhibition Of
Phospholipase A2 By Aristolochic Acid: Crystal Structure
Of A Complex Formed Between Phospholipase A2 And
Aristolochic Acid
pdb|1JQ8|A Chain A, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of A Complex Formed Between Phospholipase A2
From Daboia Russelli Pulchella And A Designed
Pentapeptide Leu-Ala-Ile-Tyr-Ser At 2.0 Resolution
pdb|1JQ8|B Chain B, Design Of Specific Inhibitors Of Phospholipase A2: Crystal
Structure Of A Complex Formed Between Phospholipase A2
From Daboia Russelli Pulchella And A Designed
Pentapeptide Leu-Ala-Ile-Tyr-Ser At 2.0 Resolution
pdb|1JQ9|A Chain A, Crystal Structure Of A Complex Formed Between
Phospholipase A2 From Daboia Russelli Pulchella And A
Designed Pentapeptide Phe-Leu-Ser- Tyr-Lys At 1.8
Resolution
pdb|1JQ9|B Chain B, Crystal Structure Of A Complex Formed Between
Phospholipase A2 From Daboia Russelli Pulchella And A
Designed Pentapeptide Phe-Leu-Ser- Tyr-Lys At 1.8
Resolution
pdb|1OXL|A Chain A, Inhibition Of Phospholipase A2 (Pla2) By
(2-Carbamoylmethyl-
5-Propyl-Octahydro-Indol-7-Yl)-Acetic Acid (Indole):
Crystal Structure Of The Complex Formed Between Pla2
From Russell's Viper And Indole At 1.8 Resolution
pdb|1OXL|B Chain B, Inhibition Of Phospholipase A2 (Pla2) By
(2-Carbamoylmethyl-
5-Propyl-Octahydro-Indol-7-Yl)-Acetic Acid (Indole):
Crystal Structure Of The Complex Formed Between Pla2
From Russell's Viper And Indole At 1.8 Resolution
pdb|1SKG|A Chain A, Structure-Based Rational Drug Design: Crystal Structure Of
The Complex Formed Between Phospholipase A2 And A
Pentapeptide Val-Ala-Phe-Arg-Ser
pdb|1SQZ|A Chain A, Design Of Specific Inhibitors Of Phopholipase A2: Crystal
Structure Of The Complex Formed Between Group Ii
Phopholipase A2 And A Designed Peptide
Dehydro-Ile-Ala-Arg-Ser At 1.2a Resolution
pdb|1SV3|A Chain A, Structure Of The Complex Formed Between Phospholipase A2
And 4-methoxybenzoic Acid At 1.3a Resolution.
pdb|1SV9|A Chain A, Crystal Structure Of The Complex Formed Between Groupii
Phospholipase A2 And Anti-Inflammatory Agent 2-[(2,6-
Dichlorophenyl)amino] Benzeneacetic Acid At 2.7a
Resolution
pdb|1SXK|A Chain A, Crystal Structure Of A Complex Formed Between
Phospholipase A2 And A Non-Specific Anti-Inflammatory
Amino Salicylic Acid At 1.2 A Resolution
pdb|1Q7A|A Chain A, Crystal Structure Of The Complex Formed Between Russell's
Viper Phospholipase A2 And An Antiinflammatory Agent
Oxyphenbutazone At 1.6a Resolution
pdb|1TDV|A Chain A, Non-specific Binding To Phospholipase A2:crystal Structure
Of The Complex Of Pla2 With A Designed Peptide
Tyr-trp-ala- Ala-ala-ala At 1.7a Resolution
pdb|1TG1|A Chain A, Crystal Structure Of The Complex Formed Between Russells
Viper Phospholipase A2 And A Designed Peptide Inhibitor
Phq-Leu-Val-Arg-Tyr At 1.2a Resolution
pdb|1TG4|A Chain A, Design Of Specific Inhibitors Of Groupii Phospholipase
A2(Pla2): Crystal Structure Of The Complex Formed
Between Russells Viper Pla2 And Designed Peptide
Phe-Leu-Ala-Tyr- Lys At 1.7a Resolution
pdb|1TJ9|A Chain A, Structure Of The Complexed Formed Between Group Ii
Phospholipase A2 And A Rationally Designed Tetra
Peptide, Val-Ala-Arg-Ser At 1.1a Resolution
pdb|1TH6|A Chain A, Crystal Structure Of Phospholipase A2 In Complex With
Atropine At 1.23a Resolution
pdb|1TK4|A Chain A, Crystal Structure Of Russells Viper Phospholipase A2 In
Complex With A Specifically Designed Tetrapeptide
Ala-Ile- Arg-Ser At 1.1 A Resolution
pdb|1TP2|A Chain A, Crystal Structure Of The Complex Of Group Ii
Phospholipasea2 Dimer With A Fatty Acid Tridecanoic Acid
At 2.4 A Resolution
pdb|1TP2|B Chain B, Crystal Structure Of The Complex Of Group Ii
Phospholipasea2 Dimer With A Fatty Acid Tridecanoic Acid
At 2.4 A Resolution
pdb|1Y38|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 Dimer And Glycerophosphate At 2.4 A
Resolution
pdb|1Y38|B Chain B, Crystal Structure Of The Complex Formed Between
Phospholipase A2 Dimer And Glycerophosphate At 2.4 A
Resolution
pdb|1ZR8|A Chain A, Crystal Structure Of The Complex Formed Between Group Ii
Phospholipase A2 And A Plant Alkaloid Ajmaline At 2.0a
Resolution
pdb|1ZYX|A Chain A, Crystal Structure Of The Complex Of A Group Iia
Phospholipase A2 With A Synthetic Anti-Inflammatory
Agent Licofelone At 1.9a Resolution
pdb|1ZWP|A Chain A, The Atomic Resolution Crystal Structure Of The
Phospholipase A2 (Pla2) Complex With Nimesulide Reveals
Its Weaker Binding To Pla2
pdb|2ARM|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
A Natural Compound Atropine At 1.2 A Resolution
pdb|2B17|A Chain A, Specific Binding Of Non-Steroidal Anti-Inflammatory Drugs
(Nsaids) To Phospholipase A2: Crystal Structure Of The
Complex Formed Between Phospholipase A2 And Diclofenac
At 2.7 A Resolution:
pdb|2FNX|A Chain A, Design Of Specific Peptide Inhibitors Of Phospholipase A2
(Pla2): Crystal Structure Of The Complex Of Pla2 With A
Highly Potent Peptide Val-Ile-Ala-Lys At 2.7a Resolution
pdb|2G58|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Designed Peptide Inhibitor Dehydro-ile-ala-arg-ser At
0.98 A Resolution
pdb|2GNS|A Chain A, Design Of Specific Peptide Inhibitors Of Phospholipase A2:
Crystal Structure Of The Complex Formed Between A Group
Ii Phospholipase A2 And A Designed Pentapeptide Ala-
Leu- Val- Tyr- Lys At 2.3 A Resolution
pdb|2DPZ|A Chain A, Structure Of The Complex Of Phospholipase A2 With N-(4-
Hydroxyphenyl)- Acetamide At 2.1 A Resolution
pdb|2O1N|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Peptide Ala-Ile-Ala-Ser At 2.8 A Resolution
pdb|2OLI|A Chain A, Crystal Structure Of The Complex Formed Between A Group Ii
Phospholipase A2 And An Indole Derivative At 2.2 A
Resolution
pdb|2OTF|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Atenolol At 1.95 A Resolution
pdb|2OTH|A Chain A, Crystal Structure Of A Ternary Complex Of Phospholipase A2
With Indomethacin And Nimesulide At 2.9 A Resolution
pdb|2OUB|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Atenolol At 2.75 A Resolution
pdb|2OYF|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
Indole Acetic Acid At 1.2 A Resolution
pdb|2PMJ|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And 1, 2 Benzopyrone At 2.4 A
Resolution
pdb|2PB8|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And Peptide Ala-Val-Tyr-Ser At 2.0 A
Resolution
pdb|2PWS|A Chain A, Crystal Structure Of The Complex Formed Between
Phospholipase A2 And 2-(4-isobutyl-phenyl)-propionic
Acid At 2.2 A Resolution
pdb|2PYC|A Chain A, Crystal Structure Of A Monomeric Phospholipase A2 From
Russell's Viper At 1.5a Resolution
pdb|2Q1P|A Chain A, Crystal Structure Of Phospholipase A2 Complex With
Propanol At 1.5 A Resolution
pdb|2QU9|A Chain A, Crystal Structure Of The Complex Of Group Ii Phospholipase
A2 With Eugenol
pdb|2QUE|A Chain A, Saturation Of Substrate-Binding Site Using Two Natural
Ligands: Crystal Structure Of A Ternary Complex Of
Phospholipase A2 With Anisic Acid And Ajmaline At 2.25 A
Resolution
pdb|2QVD|A Chain A, Identification Of A Potent Anti-Inflammatory Agent From
The Natural Extract Of Plant Cardiospermun Helicacabum:
Crystal Structure Of The Complex Of Phospholipase A2
With Benzo(G)-1,3-Benzodioxolo(5,6-A) Quinolizinium,
5,6-Dihydro-9,10-Dimethoxy At 1.93 A Resolution
pdb|2ZBH|A Chain A, Crystal Structure Of The Complex Of Phospholipase A2 With
Bavachalcone From Aerva Lanata At 2.6 A Resolution
pdb|2QHW|A Chain A, Crystal Structure Of A Complex Of Phospholipase A2 With A
Gramine Derivative At 2.2 Resolution
pdb|3CBI|A Chain A, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|B Chain B, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|C Chain C, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3CBI|D Chain D, Crystal Structure Of The Ternary Complex Of Phospholipase
A2 With Ajmaline And Anisic Acid At 3.1 A Resolution
pdb|3FG5|A Chain A, Crystal Structure Determination Of A Ternary Complex Of
Phospholipase A2 With A Pentapetide Flsyk And Ajmaline
At 2.5 A Resolution
pdb|3FO7|A Chain A, Simultaneous Inhibition Of Anti-Coagulation And
Inflammation: Crystal Structure Of Phospholipase A2
Complexed With Indomethacin At 1.4 A Resolution Reveals
The Presence Of The New Common Ligand Binding Site
pdb|3G8F|A Chain A, Crystal Structure Of The Complex Formed Between A Group Ii
Phospholipase A2 And Designed Peptide Inhibitor
Carbobenzoxy-Dehydro- Val-Ala-Arg-Ser At 1.2 A
Resolution
pdb|3H1X|A Chain A, Simultaneous Inhibition Of Anti-Coagulation And
Inflammation: Crystal Structure Of Phospholipase A2
Complexed With Indomethacin At 1.4 A Resolution Reveals
The Presence Of The New Common Ligand Binding Site
pdb|4EIX|A Chain A, Structural Studies Of The Ternary Complex Of Phaspholipase
A2 With Nimesulide And Indomethacin
pdb|4FGA|A Chain A, Design Of Peptide Inhibitors Of Group Ii Phospholipase A2:
Crystal Structure Of The Complex Of Phospholipsae A2
With A Designed Tripeptide, Ala- Tyr- Lys At 2.3 A
Resolution
pdb|4GFY|A Chain A, Design Of Peptide Inhibitors Of Phospholipase A2: Crystal
Structure Of Phospholipase A2 Complexed With A Designed
Tetrapeptide Val - Ilu- Ala - Lys At 2.7 A Resolution
pdb|4GLD|A Chain A, Crystal Structure Of The Complex Of Type Ii Phospholipase
A2 With A Designed Peptide Inhibitor Phe - Leu - Ala -
Tyr - Lys At 1.69 A Resolution
pdb|4HMB|A Chain A, Crystal Structure Of The Complex Of Group Ii Phospholipase
A2 With A
3-{3-[(Dimethylamino)methyl]-1h-Indol-7-Yl}propan-1-Ol
At 2.21 A Resolution
Length = 121
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHE-KFKR 102
YG YCG G G P D D CC +HD C N K K+KR
Sbjct: 24 YGCYCGWGGKGTPK----DATDRCCFVHDCCYGNLPDCNPKSDRYKYKR 68
>pdb|1OYF|A Chain A, Crystal Structure Of Russelles Viper (Daboia Russellii
Pulchella) Phospholipase A2 In A Complex With Venom 6-
Methyl Heptanol
Length = 121
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG YCG G G P D D CC +HD C
Sbjct: 24 YGCYCGWGGKGTPK----DATDRCCFVHDCC 50
>pdb|3R0L|A Chain A, Crystal Structure Of Crotoxin
Length = 39
Score = 27.3 bits (59), Expect = 3.6, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG YCG G G+P D D CC HD C K
Sbjct: 3 YGCYCGAGGQGWPQ----DASDRCCFEHDCCYAK 32
>pdb|1XXS|A Chain A, Structural Insights For Fatty Acid Binding In A Lys49
Phospholipase A2: Crystal Structure Of Myotoxin Ii From
Bothrops Moojeni Complexed With Stearic Acid
pdb|1XXS|B Chain B, Structural Insights For Fatty Acid Binding In A Lys49
Phospholipase A2: Crystal Structure Of Myotoxin Ii From
Bothrops Moojeni Complexed With Stearic Acid
Length = 122
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 19/69 (27%)
Query: 50 SVGIRYGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQK 109
S G+ YG CGVG G KP D D CC +H +C C++K C K +
Sbjct: 20 SYGV-YGCNCGVGGRG----KPKDATDRCCYVH-KC----------CYKKLTGCDPKKDR 63
Query: 110 FGNVGFSWK 118
+ +SWK
Sbjct: 64 Y---SYSWK 69
>pdb|4H0Q|A Chain A, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
pdb|4H0Q|B Chain B, Crystal Structure Of A Acidic Pla2 From Trimeresurus
Stejnegeri Venom
Length = 121
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG +CG G G +P D D CC +HD C K
Sbjct: 24 YGCFCGKGGHG----RPQDATDRCCFVHDCCYGK 53
>pdb|1GOD|A Chain A, Monomeric Lys-49 Phospholipase A2 Homologue Isolated From
The Venom Of Cerrophidion (Bothrops) Godmani
Length = 121
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 18/64 (28%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKFKRCIKKVQKFGNVG 114
YG CGVG G KP D D CC +H +C C++K C K +
Sbjct: 24 YGCNCGVGSRG----KPKDATDRCCFVH-KC----------CYKKLTDCSPKTDSY---S 65
Query: 115 FSWK 118
+SWK
Sbjct: 66 YSWK 69
>pdb|3DIH|A Chain A, Crystal Structure Of Ammodytin L
Length = 122
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG +CG+G G KP D D CC +H C K
Sbjct: 24 YGCHCGLGNKG----KPKDATDRCCFVHSCCYAK 53
>pdb|1N28|B Chain B, Crystal Structure Of The H48q Mutant Of Human Group Iia
Phospholipase A2
pdb|1N28|A Chain A, Crystal Structure Of The H48q Mutant Of Human Group Iia
Phospholipase A2
Length = 124
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKF 100
YG +CGVG G P D D CC D C K L C KF
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTQDCCY--KRLEKRGCGTKF 63
>pdb|2PH4|A Chain A, Crystal Structure Of A Novel Arg49 Phospholipase A2
Homologue From Zhaoermia Mangshanensis Venom
pdb|2PH4|B Chain B, Crystal Structure Of A Novel Arg49 Phospholipase A2
Homologue From Zhaoermia Mangshanensis Venom
Length = 121
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDK 88
YG CGVG G KP D D CC +H C K
Sbjct: 24 YGCNCGVGRRG----KPKDATDRCCFVHRCCYKK 53
>pdb|3UX7|A Chain A, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|B Chain B, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|C Chain C, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|D Chain D, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|E Chain E, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|F Chain F, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|G Chain G, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
pdb|3UX7|H Chain H, Crystal Structure Of A Dimeric Myotoxic Component Of The
Vipera Ammodytes Meridionalis Venom Reveals
Determinants Of Myotoxicity And Membrane Damaging
Activity
Length = 122
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDEC 85
YG +CG+G G KP D D CC +H C
Sbjct: 24 YGCHCGLGNGG----KPKDATDRCCFVHSCC 50
>pdb|3U8I|A Chain A, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
pdb|3U8I|B Chain B, Functionally Selective Inhibition Of Group Iia
Phospholipase A2 Reveals A Role For Vimentin In
Regulating Arachidonic Acid Metabolism
Length = 124
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 55 YGKYCGVGWSGYPGEKPCDELDACCKIHDECVDKKGLTNIKCHEKF 100
YG +CGVG G P D D CC D C K L C KF
Sbjct: 24 YGCHCGVGGRGSPK----DATDRCCVTXDCCY--KRLEKRGCGTKF 63
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,204,277
Number of Sequences: 62578
Number of extensions: 159620
Number of successful extensions: 674
Number of sequences better than 100.0: 115
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 494
Number of HSP's gapped (non-prelim): 115
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)