BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036055
         (105 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2
           SV=1
          Length = 186

 Score = 31.2 bits (69), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 22  IVHLFAIDPDGQKRPIIGLAVQTLLKALTNSGLIDPASHRLEEIDACSVECEVNIAQEWL 81
           +V++  +D  GQ+ P+ G     +L      GL    +   E   ACS  C V ++++ L
Sbjct: 70  VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGLDLEGA--CEASLACST-CHVYVSEDHL 126

Query: 82  DRLPPRSYEEEYVL 95
           D LPP    E+ +L
Sbjct: 127 DLLPPPDEREDDML 140


>sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L
           PE=1 SV=1
          Length = 183

 Score = 30.0 bits (66), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 22  IVHLFAIDPDGQKRPIIGLAVQTLLKALTNSGLIDPASHRLEEIDACSVECEVNIAQEWL 81
           +V++  +D  GQ+ P+ G     +L      G+    +   E   ACS  C V ++++ L
Sbjct: 67  VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVDLEGA--CEASLACST-CHVYVSEDHL 123

Query: 82  DRLPPRSYEEEYVL 95
           D LPP    E+ +L
Sbjct: 124 DLLPPPEEREDDML 137


>sp|Q44407|PGMI_CALBD Bifunctional phosphoglucose/phosphomannose isomerase
           OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 /
           DSM 6725 / Z-1320) GN=Athe_0619 PE=3 SV=2
          Length = 339

 Score = 29.6 bits (65), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 30  PDG-QKRPIIGLAVQTLLKALTNSGLIDPASHRLEEIDACSVECEVNIAQEWLDRLPPRS 88
           P G Q R  +G +   LL      GLI+P   ++EE         V +  +  +R  P  
Sbjct: 129 PSGLQPRAALGYSFIPLLMLFVKLGLIEPVDDQIEET--------VKVLSDLRERYKPEV 180

Query: 89  YEEEYVLKRIS 99
            EE+ + KR++
Sbjct: 181 PEEKNLAKRLT 191


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.134    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,012,158
Number of Sequences: 539616
Number of extensions: 1378202
Number of successful extensions: 2926
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2924
Number of HSP's gapped (non-prelim): 8
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)