BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036056
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZV24|OP161_ARATH Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis
thaliana GN=OEP161 PE=1 SV=1
Length = 148
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 114/143 (79%)
Query: 1 MPKSSFAGALTTPRVDVGIDTGNDFLNHTVDGFLKIGAVAATRAVAEDTYNIVKGGNFSR 60
MP S+F+G ++TP++ V +D GN FLN TVD FLKIGAV T+++AEDTY + G+ S+
Sbjct: 1 MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60
Query: 61 HHLEHALKKMCKEGAYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKN 120
LEHALKK+CKEG YWG GVY+G EYG+E++RG++DWKNAM+ GA TGA++SAVGK
Sbjct: 61 STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120
Query: 121 NRDKVVMDALTGGAIAAAAEFLS 143
+D +V+DA+ GGA+A A++F++
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143
>sp|Q41050|OEP16_PEA Outer envelope pore protein 16, chloroplastic OS=Pisum sativum
GN=OEP16 PE=1 SV=1
Length = 146
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 124/144 (86%)
Query: 1 MPKSSFAGALTTPRVDVGIDTGNDFLNHTVDGFLKIGAVAATRAVAEDTYNIVKGGNFSR 60
MP+SSF+G+L++P++DV ID GN FLN TVDGFLKIGAVAATR+VAEDT++I++ G+ S
Sbjct: 1 MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60
Query: 61 HHLEHALKKMCKEGAYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKN 120
+ E +LKKMCKEGAYWG +AGVYVGMEYGVE++RGT+DWKNAM GGA TGALVSA N
Sbjct: 61 NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120
Query: 121 NRDKVVMDALTGGAIAAAAEFLSY 144
+DK+ +DA+TG AIA AAEF++Y
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINY 144
>sp|Q0WMZ5|OP162_ARATH Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis
thaliana GN=OEP162 PE=1 SV=1
Length = 178
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 19 IDTGNDFLNHTVDGFLKIGAVAATRAVAEDTY-NIVKGGNF------------------- 58
D G+ LN D F+K V A +AV+ + Y +V G F
Sbjct: 22 FDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHRF 81
Query: 59 ------SRHHLEHALKKMCKEGAYWGTVAGVYVGMEYGVEKVR-GTKDWKNAMIGGAFTG 111
S L+ +K KE WG AG+Y G+ YG+ +VR G DW+N+ + GA TG
Sbjct: 82 PNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTG 141
Query: 112 ALVSAVG--KNNRDKVVMDALTGGAIAAAAEFLS 143
A ++ + + ++VV ALTG AI+ AA LS
Sbjct: 142 AAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175
>sp|O48528|OP163_ARATH Outer envelope pore protein 16-3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=OEP163 PE=1 SV=1
Length = 159
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 57 NFSRHHLEHALKKMCKEGAYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSA 116
N + L LK M G + + GVY+G+E V+ R +D+ N IGG GA V
Sbjct: 49 NVALPGLIRTLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLG 108
Query: 117 VGKNNRDKVVMDALTGGAIAAAAEFL 142
R + + A+ GA A L
Sbjct: 109 Y----RARSIPTAIAAGATLAVTSAL 130
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ G+ ++RG +D N++ GA TGA+++A +N +V A GG
Sbjct: 67 AVWG---GLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAA--RNGPVAMVGSAAMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q5XH94|TIM23_XENTR Mitochondrial import inner membrane translocase subunit Tim23
OS=Xenopus tropicalis GN=timm23 PE=2 SV=1
Length = 209
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GAV R ++T N+ +S+ L + ++GA W G++A +Y +
Sbjct: 90 FGAVNGLRLGFKETQNMA----WSKPKNVQILNMVTRQGALWANTLGSLALLYSAFGVII 145
Query: 92 EKVRGTKDWKNAMIGGAFTGALVSAVG 118
EK RG +D N + G TG L + G
Sbjct: 146 EKTRGAEDDLNTIAAGTMTGMLYKSTG 172
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 64 EHALKKMCKEGAYWG----TVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
+ LK M + G + V ++ E +E RGT DWKN++I G TG +
Sbjct: 112 KEVLKDMGQRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAI 166
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ G+ ++RG +D N++ GA TGA+++A ++ +V A+ GG
Sbjct: 67 AVWG---GLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAA--RSGPLAMVGSAMMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q5RDD0|TIM23_PONAB Mitochondrial import inner membrane translocase subunit Tim23
OS=Pongo abelii GN=TIMM23 PE=2 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GA+ R ++T N+ +S+ L + ++GA W G++A +Y +
Sbjct: 90 FGAMNGLRLGLKETQNMA----WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVII 145
Query: 92 EKVRGTKDWKNAMIGGAFTGALVSAVG 118
EK RG +D N + G TG L G
Sbjct: 146 EKTRGAEDDLNTVAAGTMTGMLYKCTG 172
>sp|O14925|TIM23_HUMAN Mitochondrial import inner membrane translocase subunit Tim23
OS=Homo sapiens GN=TIMM23 PE=1 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GA+ R ++T N+ +S+ L + ++GA W G++A +Y +
Sbjct: 90 FGAMNGLRLGLKETQNMA----WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVII 145
Query: 92 EKVRGTKDWKNAMIGGAFTGALVSAVG 118
EK RG +D N + G TG L G
Sbjct: 146 EKTRGAEDDLNTVAAGTMTGMLYKCTG 172
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 60 RHHLEHALKKMCKE----GAYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVS 115
+ L+H K M + + V ++ G+E G+E +R D N + G TGA+++
Sbjct: 102 KEQLKHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAILA 161
Query: 116 AVG 118
G
Sbjct: 162 KNG 164
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ G+ ++RG +D N++ GA TGA+++A ++ +V A+ GG
Sbjct: 67 AVWG---GLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAA--RSGPLAMVGSAMMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ + ++RG +D N++ GA TGA+++A +N +V A GG
Sbjct: 67 AVWG---GLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAA--RNGPVAMVGSAAMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ G+ ++RG +D N++ GA TGA+++A ++ +V A+ GG
Sbjct: 67 AVWG---GLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAA--RSVPLAMVGSAMMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 64 EHALKKMCKEGAYWG----TVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
+ LK M + G + V ++ E VE RG DWKN++I G TG +
Sbjct: 112 KEVLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAI 166
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 77 WGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
+ V ++ E VE RG DWKN++I G TG +
Sbjct: 127 FAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAI 164
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 75 AYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMDALTGGA 134
A WG G++ ++ + +VRG +D N++ GA TGA+++A +N +V A GG
Sbjct: 67 AVWG---GLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAA--RNGPVAMVGSAAMGGI 121
Query: 135 IAAAAE 140
+ A E
Sbjct: 122 LLALIE 127
>sp|Q6INU6|TIM23_XENLA Mitochondrial import inner membrane translocase subunit Tim23
OS=Xenopus laevis GN=timm23 PE=2 SV=1
Length = 209
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GA+ + ++T N+ +S+ L + ++GA W G++A +Y V
Sbjct: 90 FGALNGLKLGFKETQNM----PWSKPKNVQILNMVTRQGALWANTLGSLALLYSAFGVIV 145
Query: 92 EKVRGTKDWKNAMIGGAFTGALVSAVG 118
EK RG +D N + G TG L + G
Sbjct: 146 EKTRGAEDDLNTIAAGTMTGMLYKSTG 172
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 64 EHALKKMCKEGAYWG----TVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
LK M + G + V ++ E VE RG DWKN++I G TG +
Sbjct: 112 REVLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAI 166
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 64 EHALKKMCKEGAYWG----TVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGK 119
+ LK M + G + V ++ E VE RG DWKN++I G TG +
Sbjct: 104 KEVLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAI----- 158
Query: 120 NNRDKVVMDALTGGAIAAAAEFLSY 144
R + AL G AA + + Y
Sbjct: 159 GFRAGLKAGALGCGGFAAFSAVIDY 183
>sp|A4IFL0|TIM23_BOVIN Mitochondrial import inner membrane translocase subunit Tim23
OS=Bos taurus GN=TIMM23 PE=2 SV=1
Length = 209
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GA+ R ++T N+ +S+ L + ++GA W G++A +Y +
Sbjct: 90 FGAMNGLRLGLKETQNMA----WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVII 145
Query: 92 EKVRGTKDWKNAMIGGAFTGAL 113
EK RG +D N + G TG L
Sbjct: 146 EKTRGAEDDLNTVAAGTMTGML 167
>sp|Q2UAP8|TIM22_ASPOR Mitochondrial import inner membrane translocase subunit tim22
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=tim22 PE=3 SV=1
Length = 184
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 77 WGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
+G V +Y G E VE +R D N++I G TG ++
Sbjct: 114 FGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
>sp|Q5SRD1|TI23B_HUMAN Putative mitochondrial import inner membrane translocase subunit
Tim23B OS=Homo sapiens GN=TIMM23B PE=5 SV=2
Length = 257
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 36 IGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGV 91
GA+ R ++T N+ +S+ L + ++GA W G++A +Y +
Sbjct: 90 FGAMNGLRLGLKETQNMA----WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVII 145
Query: 92 EKVRGTKDWKNAMIGGAFTGAL 113
EK RG +D N + G TG L
Sbjct: 146 EKTRGAEDDLNTVAAGTMTGML 167
>sp|Q7T2P6|TIM23_DANRE Mitochondrial import inner membrane translocase subunit Tim23
OS=Danio rerio GN=timm23 PE=2 SV=1
Length = 208
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 58 FSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGAL 113
+S+ L + ++GA W G+VA +Y +EK RG +D N + G TG +
Sbjct: 108 WSKPRNVQILNMVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDDLNTVAAGTLTGMV 167
Query: 114 VSAVG 118
+ G
Sbjct: 168 FKSTG 172
>sp|Q8ZEK1|SELD_YERPE Selenide, water dikinase OS=Yersinia pestis GN=selD PE=3 SV=1
Length = 348
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 17 VGIDTGNDFLNHTVDGFLKIGAVAATRAVAEDTYNIVKGGNFSRHHLEHALKKMCKEGAY 76
VGI + DF VD G +AAT A++ D Y + + L + K+ E A
Sbjct: 61 VGIISTTDFFMPIVDDPFDFGRIAATNAIS-DVYAMGGKPIMAIAILGWPIDKLAPEIAQ 119
Query: 77 WGTVAGVYVGMEYGVEKVRG-TKDWKNAMIGGAFTGALVSAVGKNN 121
G YV + G+ G + D ++G A TG + + K N
Sbjct: 120 QVIEGGRYVCQQAGISLAGGHSIDAPEPILGLAVTGIVSTEQVKKN 165
>sp|Q9WTQ8|TIM23_MOUSE Mitochondrial import inner membrane translocase subunit Tim23
OS=Mus musculus GN=Timm23 PE=2 SV=1
Length = 209
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 58 FSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGAL 113
+S+ L + ++GA W G++A +Y +EK RG +D N + G TG L
Sbjct: 108 WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGML 167
Query: 114 VSAVG 118
G
Sbjct: 168 YKCTG 172
>sp|O35093|TIM23_RAT Mitochondrial import inner membrane translocase subunit Tim23
OS=Rattus norvegicus GN=Timm23 PE=2 SV=1
Length = 209
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 58 FSRHHLEHALKKMCKEGAYW----GTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGAL 113
+S+ L + ++GA W G++A +Y +EK RG +D N + G TG L
Sbjct: 108 WSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDFNTVAAGTMTGML 167
Query: 114 VSAVG 118
G
Sbjct: 168 YKCTG 172
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 77 WGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALV 114
+ V ++ E VE RG DWKN+++ G TG +
Sbjct: 119 FAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAI 156
>sp|P26533|ATPE_SYNY3 ATP synthase epsilon chain OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=atpC PE=1 SV=3
Length = 136
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 81 AGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVSAVGKNNRDKVVMD 128
A + +E GV +VR KDW+N + G F A +NN KV+++
Sbjct: 38 APLLTALEIGVMRVRPGKDWQNIAVMGGF------AEVENNEVKVLVN 79
>sp|Q9LZH8|OP164_ARATH Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis
thaliana GN=OEP164 PE=2 SV=1
Length = 136
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 68 KKMCKEGAYWGTVAGVYVGMEYGVEKVRGTKDWKNAM 104
K + + G G V+GV+ G+++ RG DW NA+
Sbjct: 54 KSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNAL 90
>sp|P81265|PIGR_BOVIN Polymeric immunoglobulin receptor OS=Bos taurus GN=PIGR PE=2 SV=1
Length = 757
Score = 30.0 bits (66), Expect = 5.4, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 72 KEGAYWGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGA 108
KEG +G A VYV +E V+ +G K K A G A
Sbjct: 546 KEGPRYGETAAVYVAVESRVKGSQGAKQVKAAPAGAA 582
>sp|Q12328|TIM22_YEAST Mitochondrial import inner membrane translocase subunit TIM22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM22 PE=1 SV=1
Length = 207
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 77 WGTVAGVYVGMEYGVEKVRGTKDWKNAMIGGAFTGA 112
+G + +Y G+E +E +R D N + G FTGA
Sbjct: 129 FGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGA 164
>sp|Q54QM0|TIM22_DICDI Mitochondrial import inner membrane translocase subunit tim22
OS=Dictyostelium discoideum GN=timm22 PE=3 SV=1
Length = 179
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 83 VYVGMEYGVEKVRGTKDWKNAMIGGAFTGALVS 115
VY G E +EK RG D N + G TGA+ +
Sbjct: 117 VYTGTECAIEKARGRTDKLNPIYAGCTTGAVFA 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,958,616
Number of Sequences: 539616
Number of extensions: 2345829
Number of successful extensions: 5334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5303
Number of HSP's gapped (non-prelim): 56
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)