Query 036056
Match_columns 146
No_of_seqs 148 out of 353
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 15:09:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036056.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036056hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 30.3 8.9 0.00064 23.8 1.2 23 82-104 21-44 (75)
2 d3bpya1 a.4.5.14 (A:93-177) Af 26.7 35 0.0025 21.3 3.8 37 65-104 16-58 (85)
3 d1mcvi_ g.3.2.1 (I:) Trypsin i 26.6 1.1 8.2E-05 23.1 -3.0 21 89-111 2-22 (28)
4 d1d5va_ a.4.5.14 (A:) Adipocyt 15.6 26 0.0019 22.3 1.2 23 82-104 29-52 (94)
5 d2a07f1 a.4.5.14 (F:503-584) F 13.4 73 0.0053 19.5 3.0 23 82-104 27-50 (82)
6 d2hdca_ a.4.5.14 (A:) Genesis 13.1 35 0.0025 21.8 1.3 23 82-104 27-50 (97)
7 d1pq1a_ f.1.4.1 (A:) Apoptosis 12.2 1.3E+02 0.0098 21.0 4.6 49 57-105 117-167 (196)
8 d2imja1 d.17.4.23 (A:5-159) Hy 11.2 25 0.0018 24.7 0.0 17 87-103 12-28 (155)
9 d2c6ya1 a.4.5.14 (A:1-98) Inte 10.0 35 0.0026 21.8 0.5 23 82-104 28-51 (98)
10 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 9.9 1.8E+02 0.013 19.5 4.5 47 59-105 83-131 (164)
No 1
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.31 E-value=8.9 Score=23.78 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=16.1
Q ss_pred HHhhcchhhhhhhhh-ccchhHHH
Q 036056 82 GVYVGMEYGVEKVRG-TKDWKNAM 104 (146)
Q Consensus 82 gvfsg~ec~ie~~Rg-k~D~~Ns~ 104 (146)
-+|.-++--...+|. +++|.|+|
T Consensus 21 eIy~~i~~~fpy~r~~~~gWkNSI 44 (75)
T d1kq8a_ 21 EINEYLMGKFPFFRGSYTGWRNSV 44 (75)
T ss_dssp HHHHHHHHHCTTGGGTCSCCHHHH
T ss_pred HHHHHHHHhCcccccCCccchhHh
Confidence 456666666666665 67899997
No 2
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.73 E-value=35 Score=21.35 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=24.5
Q ss_pred HHHHHhcccchhHHHHHHHhhcchhhhhhhhhcc------chhHHH
Q 036056 65 HALKKMCKEGAYWGTVAGVYVGMEYGVEKVRGTK------DWKNAM 104 (146)
Q Consensus 65 ~~lk~~g~~g~~~g~vggvfsg~ec~ie~~Rgk~------D~~Ns~ 104 (146)
.++++.+...+.. --+|.-++--...+|.+. +|+|+|
T Consensus 16 ~Ai~~sp~~~ltL---~eIY~~i~~~fPyyr~~~~~~~~~gWkNSI 58 (85)
T d3bpya1 16 QAIESAPEKRLTL---AQIYEWMVRTVPYFKDKGDSNSSAGWKNSI 58 (85)
T ss_dssp HHHHHSTTSCBCH---HHHHHHHHHHCGGGTTCTTCCTTSHHHHHH
T ss_pred HHHHhCCCCCccH---HHHHHHHHHhChhhhccCcccccccchhhH
Confidence 3444444444433 378888888888888654 599997
No 3
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=26.62 E-value=1.1 Score=23.07 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=14.9
Q ss_pred hhhhhhhhccchhHHHHHHHHHH
Q 036056 89 YGVEKVRGTKDWKNAMIGGAFTG 111 (146)
Q Consensus 89 c~ie~~Rgk~D~~Ns~~aGa~TG 111 (146)
|++|++|-|.|.. -++|++-|
T Consensus 2 ctleym~c~~dsd--clagcvcg 22 (28)
T d1mcvi_ 2 CTLEYMRCKQDSD--CLAGCVCG 22 (28)
T ss_dssp EECCCCBCSSGGG--SCTTCCBC
T ss_pred ccchhhhcccccc--ccccceec
Confidence 7889998888876 55555533
No 4
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.63 E-value=26 Score=22.33 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=16.4
Q ss_pred HHhhcchhhhhhhhh-ccchhHHH
Q 036056 82 GVYVGMEYGVEKVRG-TKDWKNAM 104 (146)
Q Consensus 82 gvfsg~ec~ie~~Rg-k~D~~Ns~ 104 (146)
-+|.-++--...+|. +++|+|||
T Consensus 29 eIY~~i~~~fpyfr~~~~gWkNSI 52 (94)
T d1d5va_ 29 GIYQFIMDRFPFYRENKQGWQNSI 52 (94)
T ss_dssp HHHHHHHHHCTHHHHCCTTHHHHH
T ss_pred HHHHHHHHHCCccCccccchHHHH
Confidence 566666666666665 67899997
No 5
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.40 E-value=73 Score=19.51 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=16.5
Q ss_pred HHhhcchhhhhhhhh-ccchhHHH
Q 036056 82 GVYVGMEYGVEKVRG-TKDWKNAM 104 (146)
Q Consensus 82 gvfsg~ec~ie~~Rg-k~D~~Ns~ 104 (146)
-+|.-++--...+|. .++|.|+|
T Consensus 27 eIy~~i~~~fpyyr~~~~gWkNSI 50 (82)
T d2a07f1 27 EIYSWFTRTFAYFRRNAATWKNAV 50 (82)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHhCcccccCCcccchhH
Confidence 667777777777766 46788987
No 6
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=13.07 E-value=35 Score=21.77 Aligned_cols=23 Identities=17% Similarity=0.330 Sum_probs=15.4
Q ss_pred HHhhcchhhhhhhhh-ccchhHHH
Q 036056 82 GVYVGMEYGVEKVRG-TKDWKNAM 104 (146)
Q Consensus 82 gvfsg~ec~ie~~Rg-k~D~~Ns~ 104 (146)
-+|.-++--...+|. ..+|.|||
T Consensus 27 eIY~~i~~~fpyfr~~~~gWkNSI 50 (97)
T d2hdca_ 27 GICEFISNRFPYYREKFPAWQNSI 50 (97)
T ss_dssp HHHHHHHHHCHHHHHHCSSHHHHH
T ss_pred HHHHHHHHhCccccCCCCCchhhh
Confidence 456666666666666 56799987
No 7
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.22 E-value=1.3e+02 Score=21.00 Aligned_cols=49 Identities=16% Similarity=0.401 Sum_probs=30.1
Q ss_pred CcchHHHHHHHHHhcccchhHHHHHHHhh-cchhhhhhhhhc-cchhHHHH
Q 036056 57 NFSRHHLEHALKKMCKEGAYWGTVAGVYV-GMEYGVEKVRGT-KDWKNAMI 105 (146)
Q Consensus 57 ~~~k~~~~~~lk~~g~~g~~~g~vggvfs-g~ec~ie~~Rgk-~D~~Ns~~ 105 (146)
.+....+..+.+.+=+.|.+||-|-++|+ +-.-+++-++.. +|..+.++
T Consensus 117 ~~a~~~F~~V~~elF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~I~ 167 (196)
T d1pq1a_ 117 GTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA 167 (196)
T ss_dssp TTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 35567888899999899999995544443 333444444433 44555443
No 8
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=11.18 E-value=25 Score=24.73 Aligned_cols=17 Identities=35% Similarity=0.349 Sum_probs=15.0
Q ss_pred chhhhhhhhhccchhHH
Q 036056 87 MEYGVEKVRGTKDWKNA 103 (146)
Q Consensus 87 ~ec~ie~~Rgk~D~~Ns 103 (146)
.|.+++++|.-+|-||+
T Consensus 12 ~etA~~KVr~AEdaWNs 28 (155)
T d2imja1 12 RESAIEKIRLAEDGWNS 28 (155)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 37788999999999997
No 9
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.96 E-value=35 Score=21.78 Aligned_cols=23 Identities=26% Similarity=0.609 Sum_probs=15.2
Q ss_pred HHhhcchhhhhhhhh-ccchhHHH
Q 036056 82 GVYVGMEYGVEKVRG-TKDWKNAM 104 (146)
Q Consensus 82 gvfsg~ec~ie~~Rg-k~D~~Ns~ 104 (146)
-+|.-++--...+|. .+.|.|||
T Consensus 28 eIy~~i~~~fpyfr~~~~gWkNSI 51 (98)
T d2c6ya1 28 GIYTHITKNYPYYRTADKGWQNSI 51 (98)
T ss_dssp HHHHHHHHHCTTSCTTCHHHHHHH
T ss_pred HHHHHHHHhCcccccCCCCcchhh
Confidence 455556556666666 46799987
No 10
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.93 E-value=1.8e+02 Score=19.49 Aligned_cols=47 Identities=15% Similarity=0.344 Sum_probs=28.5
Q ss_pred chHHHHHHHHHhcccchhHHHHHHHhhcc-hhhhhhhhh-ccchhHHHH
Q 036056 59 SRHHLEHALKKMCKEGAYWGTVAGVYVGM-EYGVEKVRG-TKDWKNAMI 105 (146)
Q Consensus 59 ~k~~~~~~lk~~g~~g~~~g~vggvfsg~-ec~ie~~Rg-k~D~~Ns~~ 105 (146)
..+.+..+.+.+=+.|.+||-+-++|+.. .-+++-++. .+|..+.++
T Consensus 83 ~~~~f~~Va~elF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~i~ 131 (164)
T d1g5ma_ 83 ARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIA 131 (164)
T ss_dssp HHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 45678888888889999999554444433 233333333 345555554
Done!