BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036069
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMF
LDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH
KAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G54070 protein from Arabidopsis thaliana 3.6e-09
AT5G35830 protein from Arabidopsis thaliana 1.1e-08
ASB15
Uncharacterized protein
protein from Gallus gallus 0.00011

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036069
        (174 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080240 - symbol:AT3G54070 "AT3G54070" species...   145  3.6e-09   1
TAIR|locus:2165194 - symbol:AT5G35830 species:3702 "Arabi...   135  1.1e-08   1
UNIPROTKB|E1BRU8 - symbol:ASB15 "Uncharacterized protein"...   115  0.00011   1


>TAIR|locus:2080240 [details] [associations]
            symbol:AT3G54070 "AT3G54070" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AL132957
            InterPro:IPR026961 Pfam:PF13962 IPI:IPI00517411 PIR:T47566
            RefSeq:NP_190975.1 UniGene:At.53927 ProteinModelPortal:Q9M396
            SMR:Q9M396 PRIDE:Q9M396 EnsemblPlants:AT3G54070.1 GeneID:824574
            KEGG:ath:AT3G54070 TAIR:At3g54070 eggNOG:NOG298222
            HOGENOM:HOG000153245 InParanoid:Q9M396 OMA:QSRSIFH PhylomeDB:Q9M396
            ProtClustDB:CLSN2915638 Genevestigator:Q9M396 Uniprot:Q9M396
        Length = 574

 Score = 145 (56.1 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 41/148 (27%), Positives = 73/148 (49%)

Query:    17 ILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW 76
             +L  DWK     I  K  N + ++ITG   I   I  +     F+  L+ ++    L   
Sbjct:    58 VLTGDWKTASTLISRKECNVV-EQITGNSEIALHIAVAAKHKDFVRNLLREMDPPDLS-L 115

Query:    77 VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
              + +GN  +  AA  G  +  E+L+    +LP++ ++  + PIH AA  GH + V+YL S
Sbjct:   116 KNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQYLFS 175

Query:   137 KTTAH-LDGHDWSTLLKDLINCNLFGKY 163
             KT+   L+   +  L   +I+ +++G +
Sbjct:   176 KTSIKDLNDQQYLNLFHTMISADIYGVF 203


>TAIR|locus:2165194 [details] [associations]
            symbol:AT5G35830 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
            SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AB005236 IPI:IPI00518537
            RefSeq:NP_198432.1 UniGene:At.55145 ProteinModelPortal:Q9FFL9
            SMR:Q9FFL9 PaxDb:Q9FFL9 PRIDE:Q9FFL9 EnsemblPlants:AT5G35830.1
            GeneID:833569 KEGG:ath:AT5G35830 TAIR:At5g35830 eggNOG:NOG263959
            InParanoid:Q9FFL9 PhylomeDB:Q9FFL9 Genevestigator:Q9FFL9
            Uniprot:Q9FFL9
        Length = 282

 Score = 135 (52.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 46/161 (28%), Positives = 75/161 (46%)

Query:    11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQ 70
             +Q+ +  LK DWK     I+ +    +  KIT        I  +     F+  L+  +  
Sbjct:    89 VQLYQAALKGDWKAANGIIIEQ-KYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLES 147

Query:    71 NFLQEWVSN-EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRD 129
             N L   + N +GN  +  AA  G  ++ ++L+  N +LP +R   K  PIH AA  GH +
Sbjct:   148 NDLA--LRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGE 205

Query:   130 TVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYI 170
              V+YL  K T   + +D     ++ +N  LF    SA+ Y+
Sbjct:   206 MVKYLY-KNTRFREFND-----EEFVN--LFHAVISADIYV 238


>UNIPROTKB|E1BRU8 [details] [associations]
            symbol:ASB15 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0035556 "intracellular signal transduction"
            evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
            InterPro:IPR002110 InterPro:IPR001496 Pfam:PF00023 Pfam:PF07525
            PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
            SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00530000063050 CTD:142685
            KO:K10337 OMA:HYLALKY EMBL:AADN02010213 IPI:IPI00576418
            RefSeq:XP_415996.2 UniGene:Gga.13637 ProteinModelPortal:E1BRU8
            Ensembl:ENSGALT00000014328 GeneID:417752 KEGG:gga:417752
            NextBio:20821004 Uniprot:E1BRU8
        Length = 590

 Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    62 DKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHK 121
             D L   +H+    + ++++G++ +  AA GG    I +L+ Y  +  NV +K+ LLPIHK
Sbjct:   226 DVLEHLIHKGGDVQALADDGSSILFEAAGGGNPDCIALLLEYGGS-GNVPNKAGLLPIHK 284

Query:   122 AAQLGHRDTVRYLLSKTT 139
             AA  GH   ++YL+  T+
Sbjct:   285 AAYEGHYLVLKYLIPVTS 302


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       174   0.00075  109 3  11 22  0.41    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.27u 0.11s 17.38t   Elapsed:  00:00:00
  Total cpu time:  17.27u 0.11s 17.38t   Elapsed:  00:00:00
  Start:  Fri May 10 22:19:25 2013   End:  Fri May 10 22:19:25 2013

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