BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036072
(631 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/591 (59%), Positives = 440/591 (74%), Gaps = 60/591 (10%)
Query: 59 RVHGDGGAKCSRGSTLSLSRLLHYSSYCSLYRSHCQVPCLLPHSSSLHSLQKVLLNKSTN 118
RV G G + R S SR++H S+Y YR Q+P LPHSS
Sbjct: 41 RVIGGRGEEEVRFSGALFSRMIHSSTYHP-YR---QIP--LPHSS--------------- 79
Query: 119 VVASSLTNHNLATNILDSN--CVNYRNVSSVTDD--NQDSDGECDGNNSESEITSVSYKS 174
+LD++ C + + SS D +++ + ECD N+ E+ ++ V +S
Sbjct: 80 ------------VQLLDASLGCRGFSSGSSNVSDGCDEEVESECD-NDEETGVSCV--ES 124
Query: 175 TADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCW 234
+ +P E+ERVCKVIDELF+LDRNMEAVLDE ++LSH+L+V+VLERFRHAR+PAFRFFCW
Sbjct: 125 STNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCW 184
Query: 235 AGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKE 294
A ++ GFAH+SRTYNSMMSIL + RQFETMVS+LEEMG KGLL+METF IAM AFAAAKE
Sbjct: 185 AAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 244
Query: 295 RKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVL 354
RKKAV IFELM KYKFK GV+TINCLL++LGR+KL KEAQ+LFDKLK RFTPN+ TYTVL
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
L GWCRV+NL+EA R+WN+MID+G KPD+VAHN+MLEGLL+ K+SDAIKLF VMK+KGP
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 415 SPNVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYD 454
PNVRSYTIMI FCKQ +AAVYTCLITGFG ++++D VY+
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 455 LLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYF 514
LLKEM+E+G PPDG TYNALIKLM QKMP+ A RIY +M+++ +P+IHT+NMIMKSYF
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 515 QTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVL 574
NYEMGR VW+EMI++G CPDDNSYTVLI GLI + +S EA +YLEEML+KGMK P++
Sbjct: 485 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 544
Query: 575 DYNKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAETTKNRVYRK 625
DYNKFAAD R G+ + +ELAQ+ +FSGKF + + ARWA+ T+ R ++
Sbjct: 545 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/587 (60%), Positives = 436/587 (74%), Gaps = 60/587 (10%)
Query: 59 RVHGDGGAKCSRGSTLSLSRLLHYSSYCSLYRSHCQVPCLLPHSSSLHSLQKVLLNKSTN 118
RV G G + R S SR++H S+Y YR Q+P LPHSS
Sbjct: 41 RVIGGRGEEEVRFSGALFSRMIHSSTY-HPYR---QIP--LPHSS--------------- 79
Query: 119 VVASSLTNHNLATNILDSN--CVNYRNVSSVTDD--NQDSDGECDGNNSESEITSVSYKS 174
+LD++ C + + SS D +++ + ECD N+ E+ ++ V +S
Sbjct: 80 ------------VQLLDASLGCRGFSSGSSNVSDGCDEEVESECD-NDEETGVSCV--ES 124
Query: 175 TADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCW 234
+ +P E+ERVCKVIDELF+LDRNMEAVLDE ++LSH+L+V+VLERFRHAR+PAFRFFCW
Sbjct: 125 STNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCW 184
Query: 235 AGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKE 294
A ++ GFAH SRTYNSMMSIL + RQFETMVS+LEEMG KGLL+METF IAM AFAAAKE
Sbjct: 185 AAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 244
Query: 295 RKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVL 354
RKKAV IFELM KYKFK GV+TINCLL++LGR+KL KEAQ+LFDKLK RFTPN+ TYTVL
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
L GWCRV+NL+EA R+WN+MID G KPD+VAHN+MLEGLL+ K+SDAIKLF VMK+KGP
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 415 SPNVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYD 454
PNVRSYTIMI FCKQ +AAVYTCLITGFG ++++D VY+
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 455 LLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYF 514
LLKEM+E+G PPDG TYNALIKLM QKMP+ RIY +M+++ +P+IHT+NMIMKSYF
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 515 QTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVL 574
NYEMGR VWDEMI++G CPDDNSYTVLI GLIS+ +S EA +YLEEML+KGMK P++
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 544
Query: 575 DYNKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAETTKNR 621
DYNKFAAD R G+ + +ELAQ+ +FSGKF + + ARWA+ T+ R
Sbjct: 545 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRR 591
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/585 (60%), Positives = 436/585 (74%), Gaps = 57/585 (9%)
Query: 59 RVHGDGGAKCSRGSTLSLSRLLHYSSYCSLYRSHCQVPCLLPHSSSLHSLQKVLLNKSTN 118
RV G G + R S SR++H S+Y YR Q+P LPHS L
Sbjct: 41 RVIGGRGEEEVRFSGALFSRMIHSSTY-HPYR---QIP--LPHSVQL------------- 81
Query: 119 VVASSLTNHNLATNILDSNCVNYRNVSSVTDD--NQDSDGECDGNNSESEITSVSYKSTA 176
+ +SL C + + SS D +++ + ECD N+ E+ ++ V +S+
Sbjct: 82 -LDASL------------GCRGFSSGSSNVSDGCDEEVESECD-NDEETGVSCV--ESST 125
Query: 177 DPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAG 236
+P E+ERVCKVIDELF+LDRNMEAVLDE ++LSH+L+V+VLERFRHAR+PAFRFFCWA
Sbjct: 126 NPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAA 185
Query: 237 DKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERK 296
++ GFAH+SRTYNSMMSIL + RQFETMVS+LEEMG KGLL+METF IAM AFAAAKERK
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK 245
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLG 356
KAV IFELM KYKFK GV+TINCLL++LGR+KL KEAQ+LFDKLK RFTPN+ TYTVLL
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305
Query: 357 GWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSP 416
GWCRV+NL+EA R+WN+MID G KPD+VAHN+MLEGLL+ K+SDAIKLF VMK+KGP P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 417 NVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLL 456
NVRSYTIMI FCKQ +AAVYTCLITGFG ++++D VY+LL
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQT 516
KEM+E+G PPDG TYNALIKLM QKMP+ RIY +M+++ +P+IHT+NMIMKSYF
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDY 576
NYEMGR VWDEMI++G CPDDNSYTVLI GLIS+ +S EA +YLEEML+KGMK P++DY
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDY 545
Query: 577 NKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAETTKNR 621
NKFAAD R G+ + +ELAQ+ +FSGKF + + ARWA+ T+ R
Sbjct: 546 NKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRR 590
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 240/450 (53%), Gaps = 23/450 (5%)
Query: 172 YKSTADPREIERVCKVIDELF--SLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAF 229
Y S+ R++ V K I ++ S +++ LD+ G+ +S +V DVL RFR+A +
Sbjct: 59 YSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTY 118
Query: 230 RFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAF 289
RFF W+ + + H+ R Y+ M+ + RQ++ M ++ M +K +L++ETF I M +
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKY 178
Query: 290 AAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLT 349
A A++ +A+ F +M KY + N LL L +SK ++AQ +F+ ++ RFTP+
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 238
Query: 350 TYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVM 409
TY++LL GW + NL +A V+ EMID G PD+V ++IM++ L K G+ +A+ + M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298
Query: 410 KAKGPSPNVRSYTIMIWKFCKQN--------------------AAVYTCLITGFGNRRRM 449
P Y++++ + +N AV+ LI F RM
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358
Query: 450 DIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMI 509
VY +LKEM+ +G P+ + N +++ + + DEA ++++M++ +P TY M+
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMV 417
Query: 510 MKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
+K + + E KVW M ++G P ++++VLI GL + + +A LEEM+E G+
Sbjct: 418 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Query: 570 KAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
+ + + + L + R VL L +KM
Sbjct: 478 RPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 388 IMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRR 447
I++ + K +AI F VM+ PN+ ++ ++ CK N R
Sbjct: 173 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSK------------NVR 220
Query: 448 RMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYN 507
+ V++ M +R PD TY+ L++ + +A +++EM+ +G P I TY+
Sbjct: 221 KAQEVFE---NMRDRF-TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYS 276
Query: 508 MIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEK 567
+++ + G + + M C P Y+VL+ +++R EA EM
Sbjct: 277 IMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS 336
Query: 568 GMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
GMKA V +N +A R + + ++M+ G
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
>sp|Q9FZD4|PPR59_ARATH Putative pentatricopeptide repeat-containing protein At1g26500
OS=Arabidopsis thaliana GN=At1g26500 PE=3 SV=1
Length = 505
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 245/458 (53%), Gaps = 41/458 (8%)
Query: 183 RVCKVI-DELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWA-GDKPG 240
RVC ++ + S D + + L L+H + V F + RP RFF ++ P
Sbjct: 48 RVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHPD 107
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVA 300
F H S T N M++I+G +R + + +E+G++GL++ +TF+I + A+A+E KK V
Sbjct: 108 FTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVN 167
Query: 301 IFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCR 360
F LMN + + V+T+N +E L + KL +EA+ +F KLK P+ TY ++ G+C
Sbjct: 168 YFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCD 227
Query: 361 VKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAK-GPSPNVR 419
V +L+EA ++WN M+D+GF D+ A ++E LLK + +A K+F VM +K G +
Sbjct: 228 VGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGG 287
Query: 420 SYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEM 459
Y +MI CK + + LI G +RR+ Y L++ +
Sbjct: 288 FYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV 347
Query: 460 EERGCPPDGLTYNALIK-LMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGN 518
E PD Y+ LIK L+KI++ EA ++++M++ G +P +HTY M+++ +
Sbjct: 348 EN----PDISIYHGLIKGLVKIKR-ASEATEVFRKMIQRGCEPIMHTYLMLLQGH----- 397
Query: 519 YEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNK 578
+GR+ R+G P N T+ +GG+I + E KY+E L++G++ P DY+K
Sbjct: 398 --LGRRG-----RKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSK 450
Query: 579 FAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAE 616
F S + +E+A+K+R F+++++ R+ E
Sbjct: 451 FLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRYGE 488
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 247/456 (54%), Gaps = 30/456 (6%)
Query: 168 TSVSYKSTAD--PREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHAR 225
+SV + +A+ ++ ER+CK++ + D +E +L+E + LS L+ +VL++ +A
Sbjct: 51 SSVETQVSANDASQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAG 108
Query: 226 RPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIA 285
A F WA ++ GF H + YN+++ LG+ +QF+ + S++++M K LLS ETF +
Sbjct: 109 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALI 168
Query: 286 MNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRF 344
+A A++ K+A+ F M ++ FK N +L+ L +S+ +AQ +FDK+ K RF
Sbjct: 169 SRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRF 228
Query: 345 TPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIK 404
P++ +YT+LL GW + NL+ V EM D+GF+PDVVA+ I++ K K +AI+
Sbjct: 229 EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIR 288
Query: 405 LFEVMKAKGPSPNVRSYTIMI------------WKFCKQN--------AAVYTCLITGFG 444
F M+ + P+ + +I +F +++ A Y L+ +
Sbjct: 289 FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYC 348
Query: 445 NRRRMDIVYDLLKEMEERGCPPDGLTYNALI-KLMKIQKMPDEAVRIYKEMVRSGFKPTI 503
+RM+ Y + EM +G P+ TY+ ++ L+++Q+ EA +Y+ M +PT+
Sbjct: 349 WSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQR-SKEAYEVYQTM---SCEPTV 404
Query: 504 HTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEE 563
TY ++++ + +M K+WDEM +G P + ++ LI L +++ EA +Y E
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Query: 564 MLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
ML+ G++ P +++ L GR + +L KM
Sbjct: 465 MLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 25/281 (8%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERK 296
K F + ++Y ++ G+ + + EM ++G + + I +NA AK+ +
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLL 355
+A+ F M + K L+ LG K +A F++ K F TY L+
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
G +C + + +A + +EM KG P+ ++I+L L+++ + +A ++++ M +
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE--- 401
Query: 416 PNVRSYTIMIWKFCKQN--------------------AAVYTCLITGFGNRRRMDIVYDL 455
P V +Y IM+ FC + +++ LIT + ++D +
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 456 LKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVR 496
EM + G P G ++ L + + + D+ + +M R
Sbjct: 462 FNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 214/417 (51%), Gaps = 24/417 (5%)
Query: 180 EIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKP 239
E+E++ +++ S +E L+E GI+L L++ VL R A +RFF WA +P
Sbjct: 66 EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQP 125
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKG--LLSMETFKIAMNAFAAAKERKK 297
G+ H+ SM+ IL + RQF + ++EEM + L+ E F + M FA+A KK
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKK 185
Query: 298 AVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGG 357
AV + + M KY + CLL+ L ++ KEA +F+ ++ +F PNL +T LL G
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYG 245
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
WCR LMEA V +M + G +PD+V +L G GK +DA L M+ +G PN
Sbjct: 246 WCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPN 305
Query: 418 VRSYTIMIWKFCK---------------------QNAAVYTCLITGFGNRRRMDIVYDLL 456
V YT++I C+ + YT LI+GF +D Y +L
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQT 516
+M ++G P +TY ++ + ++ +E + + ++M R G P + YN++++ +
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM-KAP 572
G + ++W+EM G P +++ ++I G SQ EA + +EM+ +G+ AP
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAP 482
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 228/465 (49%), Gaps = 54/465 (11%)
Query: 197 NMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILG 256
+ME LDE ++L+ +V +L+R ++ + AFRFF WAG + ++H YN M+ IL
Sbjct: 111 DMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 257 ----RARQFETMVSMLEEMGEKG--------LLSM-----ETFKIAMNAFAAAKERKKAV 299
+ +QF ++ ML+ M LL + E + + FA +RK+
Sbjct: 171 STKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFA---KRKRI- 226
Query: 300 AIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWC 359
+ K + ++ N LL+ L + L KE + L +++HR P+ T+ VL GWC
Sbjct: 227 -------RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWC 279
Query: 360 RVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS---P 416
RV++ +A ++ EMI+ G KP+ + ++ + G +A LF+ M KG + P
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 417 NVRSYTIMIWKFCKQNAA--------------------VYTCLITGFGNRRRMDIVYDLL 456
+++ +MI K + A Y +I G ++D Y L
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQT 516
EM +G PPD +TYN ++++ + DEA+++Y MV S P++ TYNM++ +F+
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDY 576
+ + W EM +R C D +Y +I GL R+ EA LEE++ KG+K P +
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVF 519
Query: 577 NKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAETTKNR 621
+ F LS G + ++++ M+ KF ++ R+A + K +
Sbjct: 520 DSFLMRLSEVGNLKAIHKVSEHMK---KFYNHSMARRFALSEKRK 561
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 214/412 (51%), Gaps = 22/412 (5%)
Query: 180 EIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKP 239
++E+ +++ + S +E L+E G+ L L+ VL R A +RFF WA +P
Sbjct: 82 DVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQP 141
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKG--LLSMETFKIAMNAFAAAKERKK 297
+ H+ Y SM+ IL + RQF + ++EEM ++ L+ E F + + FA+A KK
Sbjct: 142 RYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKK 201
Query: 298 AVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGG 357
A+ + + M K+ F+ CLL+ L + K+A LF+ ++ RF NL +T LL G
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYG 261
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
WCRV +MEA V +M + GF+PD+V + +L G GK +DA L M+ +G PN
Sbjct: 262 WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPN 321
Query: 418 VRSYTIMIWKFCK--------------------QNAAVYTCLITGFGNRRRMDIVYDLLK 457
YT++I CK + YT L++GF ++D Y +L
Sbjct: 322 ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLD 381
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+M ++G P LTY ++ + ++ +E + + ++M + + P I YN++++ + G
Sbjct: 382 DMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG 441
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
+ ++W+EM G P +++ ++I GL SQ EA + +EM+ +G+
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 231/466 (49%), Gaps = 39/466 (8%)
Query: 129 LATNILDSNCVNYRNVSSVTDDNQDSDGECDGNNSESEITSVSYKSTADPREIERVCKVI 188
+T+I DS V + + DD D D C ++ E+ S ++ ++ K++
Sbjct: 57 FSTSIADSEQVGFTRSNIEKDDESDIDLGCSISD---ELVS---------EDVGKISKLV 104
Query: 189 DELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTY 248
+ S + + L+EC + S+ LVV++L R R+ AF FF WAG + G+ + R Y
Sbjct: 105 KDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREY 164
Query: 249 NSMMSILGRARQFETMVSMLEEMGE--KGLLSMETFKIAMNAFAAAKERKKAVAIFELMN 306
+SM+SILG+ R+F+T ++++EM + L++ +T I + + A + KA+ F
Sbjct: 165 HSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 224
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRV-KNLM 365
++K + G+D LL L R K +A L K ++ + ++ ++L GWC V +
Sbjct: 225 RFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPR 284
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
EA RVW EM + G K DVV+++ M+ K G + +KLF+ MK + P+ + Y ++
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 426 WKFCKQ---------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGC 464
K N Y LI R+ + + EM E+G
Sbjct: 345 HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
Query: 465 PPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRK 524
P TY+A M+I + +E + +M + G +PT+ TY M+++ + +++
Sbjct: 405 FPTIRTYHAF---MRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 525 VWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMK 570
+WDEM + PD +SY V+I GL + EAY Y +EM +KGM+
Sbjct: 462 LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 150/327 (45%), Gaps = 33/327 (10%)
Query: 204 ECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMS----ILGRAR 259
E GI+ +L+ L R+++ FC +K + +++++N +++ ++G R
Sbjct: 229 EMGIDDFQSLL-SALCRYKNVSDAGHLIFC---NKDKYPFDAKSFNIVLNGWCNVIGSPR 284
Query: 260 QFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTIN 318
+ E + EMG G+ + ++ ++ ++ K + +F+ M K + N
Sbjct: 285 EAE---RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 319 CLLENLGRSKLPKEAQLLFDKLKHR--FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMID 376
++ L ++ EA+ L ++ PN+ TY L+ C+ + EA +V++EM++
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 377 KGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVY 436
KG P + ++ + +L+ G+ + +L M+ G P V +Y ++I K C+
Sbjct: 402 KGLFPTIRTYHAFMR-ILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRW----- 453
Query: 437 TCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVR 496
R D V L EM+E+ PD +Y +I + + +EA YKEM
Sbjct: 454 ----------RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 503
Query: 497 SGFKPTIHTYNMIMKSYFQTGNYEMGR 523
G +P + +MI +S+F Y R
Sbjct: 504 KGMRPNENVEDMI-QSWFSGKQYAEQR 529
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 26/251 (10%)
Query: 377 KGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS-PNVRSYTIMIWKFCKQNAAV 435
+G+ V ++ M+ L K+ K A L + M+ PS N ++ IMI K+C +
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVG 214
Query: 436 YTCLITGFGNRRRMDIVYDLLKEMEERGC-------------------PPDGLTYNALIK 476
R ++++ D + + C P D ++N ++
Sbjct: 215 KAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLN 274
Query: 477 -LMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCC 535
+ P EA R++ EM G K + +Y+ ++ Y + G+ K++D M +
Sbjct: 275 GWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE 334
Query: 536 PDDNSYTVLIGGLISQDRSGEAYKYLEEMLE-KGMKAPVLDYNKFAADLSRAGRS----Y 590
PD Y ++ L EA ++ M E KG++ V+ YN L +A ++
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 591 VLDELAQKMRF 601
V DE+ +K F
Sbjct: 395 VFDEMLEKGLF 405
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 204/395 (51%), Gaps = 26/395 (6%)
Query: 198 MEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGR 257
++ +LD+CGI+L+ LV++V+ R R +PA+ + +S YN ++ +LG+
Sbjct: 96 IKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGK 155
Query: 258 ARQFETMVSMLEEMGEK-GLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDT 316
R+FE + +EM ++ G ++ +T+++ +N +AAA + +AV +FE ++ +
Sbjct: 156 MRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVA 215
Query: 317 INCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMID 376
+ LL L R K + A+ LF + F ++ ++L GWC + N+ EA R W ++I
Sbjct: 216 FHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIA 275
Query: 377 KGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFC------- 429
+PDVV++ M+ L K GK A++L+ M +P+V+ +I C
Sbjct: 276 SKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPE 335
Query: 430 -------------KQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERG--CPPDGLTYNAL 474
N Y L+ RR + V++L++EME +G C P+ +T++ L
Sbjct: 336 ALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYL 395
Query: 475 IKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGC 534
+K + K D + + M ++ + T YN++ + Y Q E R++W EM R G
Sbjct: 396 LKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 535 CPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
PD +YT+ I GL ++ + GEA Y +EM+ KGM
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 143/336 (42%), Gaps = 39/336 (11%)
Query: 287 NAFAAAKERKKAVAIFELMNKYKF-----------KAGVD-TINCLLENLGRSKLPKEAQ 334
N F K+++ A+ + ++ ++ K G+D T +LE + R++ +
Sbjct: 67 NRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPA 126
Query: 335 LLFDKLKHRFTPNLTT---YTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLE 391
+ +L + + +L++ Y +L +++ E +V++EM + + + ++L
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLN 186
Query: 392 GLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDI 451
K +A+ +FE K G ++ ++ ++ C+ + T F +RRR
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA--ETLFCSRRR--- 241
Query: 452 VYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMK 511
E GC D N ++ + EA R +K+++ S +P + +Y ++
Sbjct: 242 ---------EFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMIN 290
Query: 512 SYFQTGNY----EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEK 567
+ + G E+ R +WD RR PD +I L + R EA + E+ EK
Sbjct: 291 ALTKKGKLGKAMELYRAMWD--TRRN--PDVKICNNVIDALCFKKRIPEALEVFREISEK 346
Query: 568 GMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
G V+ YN L + R+ + EL ++M G
Sbjct: 347 GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 75/198 (37%), Gaps = 40/198 (20%)
Query: 228 AFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMN 287
FR G P N TYNS++ L + R+ E + ++EEM KG S + +
Sbjct: 339 VFREISEKGPDP----NVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG-SCSPNDVTFS 393
Query: 288 AFAAAKERKKAVAI-FELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTP 346
+R K V I E M K K + D N +
Sbjct: 394 YLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFR------------------------ 429
Query: 347 NLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF 406
L W + + + E +W+EM G PD + I + GL GK +A+ F
Sbjct: 430 -------LYVQWDKEEKVRE---IWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYF 479
Query: 407 EVMKAKGPSPNVRSYTIM 424
+ M +KG P R+ ++
Sbjct: 480 QEMMSKGMVPEPRTEMLL 497
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 214/436 (49%), Gaps = 39/436 (8%)
Query: 198 MEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGR 257
ME+ L GI+L+ NL+ L R RH + A FF + P + ++N ++ ILGR
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 258 ARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFE----LMNKYKFKAG 313
RQF+ + ++ EM + S ETF I + AA ++AV F+ + +F+
Sbjct: 118 VRQFDVVRQLIVEMDQT---SPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFR-- 172
Query: 314 VDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNE 373
+ LL+ L + K A +F++ K F + YT+L+ GWC+++ + A + E
Sbjct: 173 LVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVE 232
Query: 374 MIDKGFKPDVVAHNIMLEGLLKIGKRS----------DAIKLFEVMKAKGPSPNVRSYTI 423
MI+ G +P+VV +N++L G+ + +A K+F+ M+ +G P+V S++I
Sbjct: 233 MIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSI 292
Query: 424 MIWKFCKQNAA--------------------VYTCLITGFGNRRRMDIVYDLLKEMEERG 463
++ + + + A YT ++ + R++ +LL+ M E G
Sbjct: 293 VLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESG 352
Query: 464 CPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGR 523
P TYN K K +K + A+ +Y++M KP+ TYN+++ ++ G E +
Sbjct: 353 ISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVK 412
Query: 524 KVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADL 583
++WD++ PD +SYT L+ GL S+++ EA Y EM+E+G L + L
Sbjct: 413 EIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGL 472
Query: 584 SRAGRSYVLDELAQKM 599
++ + L +K+
Sbjct: 473 IQSNKMRTWRRLKKKL 488
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 194/389 (49%), Gaps = 29/389 (7%)
Query: 207 INLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVS 266
+NLS LV +L RFR R A WA G H+S Y+ + ILG+A++++ M
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 267 MLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGR 326
+E M L+++ T M FA A E ++AV IF+ + ++ + +++N LL+ L +
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 327 SKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAH 386
K ++A+++ +LK TPN T+ + + GWC+ + EA EM GF+P V+++
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 387 NIMLEGLLKIGKRSDAIKLFEV---MKAKGPSPNVRSYTIMIWKF--------------- 428
++ ++ + IK++E+ M+A G PN +YT ++
Sbjct: 263 TTIIRCYC---QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 429 -----CKQNAAVYTCLITGFGNRRRMDIVYDLLK-EMEERGCPPDGLTYNALIKLMKIQK 482
CK ++ Y CLI R++ + + EM E G + TYN++I +
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 483 MPDEAVRIYKEMVRSGF-KPTIHTYNMIMKSYFQTGN-YEMGRKVWDEMIRRGCCPDDNS 540
D+A+ + KEM S P +HTY +++S F+ G+ E+G+ + + + + D+++
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 541 YTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
YT LI L + AY EEM+ + +
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQDI 468
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
W R+K +E R DK + VA ++ G+ +A+ +F+ + G N
Sbjct: 137 WDRMKEFVERMRG-----DKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGEFGLEKN 189
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
S +++ CK+ +R++ +L +++ P+ T+N I
Sbjct: 190 TESMNLLLDTLCKE---------------KRVEQARVVLLQLKSH-ITPNAHTFNIFIHG 233
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
+EA+ +EM GF+P + +Y I++ Y Q + ++ EM G P+
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
+YT ++ L +Q EA + M G K L YN L+RAGR
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKA 298
GF +Y +++ + +F + ML EM G T+ M++ A KE ++A
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLF--DKLKHRFTPNLTTYTVLLG 356
+ + M + K NCL+ L R+ +EA+ +F + + + N +TY ++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 357 GWCRVKNLMEAGRVWNEMIDKGF-KPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP- 414
+C +A + EM PDV + +L K G + KL + M K
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 415 SPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNAL 474
S + +YT +I + C+ N + Y L +EM + P T L
Sbjct: 434 SLDESTYTFLIQRLCRANMCEW---------------AYCLFEEMISQDITPRHRTCLLL 478
Query: 475 IKLMKIQKMPDEAVRI 490
++ +K + M + A RI
Sbjct: 479 LEEVKKKNMHESAERI 494
Score = 40.0 bits (92), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 10/196 (5%)
Query: 221 FRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLE-EMGEKGL-LS 278
F A R A R + G +S YN ++ L RA + E + EM E G+ ++
Sbjct: 310 FEEALRVATRM-----KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSIN 364
Query: 279 METFKIAMNAFAAAKERKKAVAIFELMNKYKF-KAGVDTINCLLEN-LGRSKLPKEAQLL 336
T+ + + E KA+ + + M V T LL + R + + +LL
Sbjct: 365 TSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLL 424
Query: 337 FDKL-KHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLK 395
+ + KH + + +TYT L+ CR A ++ EMI + P ++LE + K
Sbjct: 425 KEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKK 484
Query: 396 IGKRSDAIKLFEVMKA 411
A ++ +MK
Sbjct: 485 KNMHESAERIEHIMKT 500
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 452 VYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMK 511
++D L E G + + N L+ + +K ++A R+ ++S P HT+N+ +
Sbjct: 177 IFDRLGEF---GLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIH 232
Query: 512 SYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKA 571
+ + E EM G P SYT +I Q + Y+ L EM G
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 572 PVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+ Y + L+ +A +M+ SG
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 23/395 (5%)
Query: 228 AFRFFCWAGDKPGFAHNS-RTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIA 285
+ FF WA + + H S YN M+ + G+ RQF+ +++ M + + +S+ETF I
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 286 MNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFT 345
+ + A +AV F M Y + ++ NL R + EAQ FD LK RF
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE 252
Query: 346 PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKL 405
P++ YT L+ GWCR + EA +V+ EM G +P+V ++I+++ L + G+ S A +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 406 FEVMKAKGPSPN--------------------VRSYTIMIWKFCKQNAAVYTCLITGFGN 445
F M G +PN ++ Y M C+ + Y LI
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 446 RRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHT 505
++ +L M ++ C + T+N + + ++ ++ + A R+Y +M+ + +P T
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 506 YNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEML 565
YN++M+ + + + +M K+ EM + P+ N+Y +L+ AYK +EM+
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Query: 566 EKGMKAPVLD-YNKFAADLSRAGRSYVLDELAQKM 599
E+ P L Y A L RAG+ +EL +KM
Sbjct: 493 EEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 371 WNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCK 430
+NEMID L G K+ + A L ++MK++ ++ ++TI+I ++ +
Sbjct: 154 YNEMID-------------LSG--KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVR 198
Query: 431 QNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRI 490
A + + + F NR ME+ GC PD + ++ +I + ++ EA
Sbjct: 199 --AGLASEAVHCF-NR------------MEDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 491 YKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLIS 550
+ + + F+P + Y +++ + + G KV+ EM G P+ +Y+++I L
Sbjct: 244 FDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 551 QDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+ A+ +ML+ G + +N +AGR+ + ++ +M+ G
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 242/523 (46%), Gaps = 37/523 (7%)
Query: 105 LHSLQKVLLNKSTNVVASSLTNHNLAT-------NILDSNCVNYRNVSSVTDDNQDSDGE 157
+ SL++V + N++++SL N L T ++D + V S + + +
Sbjct: 9 IESLRRVHSSDLENLISASLYNRTLCTASESLNHGVVDESYVLAELSSLLPISSNKTSVS 68
Query: 158 CDGNNSESEITSVSYKSTADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDV 217
+ ++S++++ S+ S D ++ V + ++ L GI LS ++V DV
Sbjct: 69 KEDSSSKNQVAIDSFLSAED-----KLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADV 123
Query: 218 LERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL- 276
L R + FF WA +PG + +Y+ ++ LGR + F M+ +L+ M +G+
Sbjct: 124 LNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVN 183
Query: 277 LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLL 336
+E IAM++F ++A+ +FE + K ++ N LL L A+ +
Sbjct: 184 PDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSV 243
Query: 337 FDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKI 396
F+ K + +Y +++ GW ++ + E +V EM++ GF PD ++++ ++EGL +
Sbjct: 244 FNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 397 GKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKF--------------------CKQNAAVY 436
G+ +D++++F+ +K KG P+ Y MI F C+ N Y
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 437 TCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVR 496
+ L++G R++ ++ +EM RG P + +K + P A+ IY++ +
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Query: 497 SGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGE 556
+G + + Y +++K + G M VWDEM G D Y ++ GL
Sbjct: 424 AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLEN 483
Query: 557 AYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
A +EE + KG Y++ ++ L + ++ ELA K+
Sbjct: 484 AVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT----ELAYKL 522
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 158/349 (45%), Gaps = 28/349 (8%)
Query: 283 KIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDT------INCLLENLGRSKLPKEAQLL 336
++A+++F +A+++ + V + +L K + + + I+ + + L R L EA +
Sbjct: 77 QVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVT 136
Query: 337 FDKLKHR---FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGL 393
F R T ++ +Y+V+L R K V M+ +G PD+ I ++
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 394 LKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ-------------------NAA 434
+++ AI+LFE ++ G + S+ ++ C++ ++
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSC 256
Query: 435 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
Y +I+G+ ++ + +LKEM E G PD L+Y+ LI+ + +++V I+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
G P + YN ++ ++ +++ + + M+ C P+ +Y+ L+ GLI +
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+A + EEML +G+ F L G + + QK R +G
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 154/337 (45%), Gaps = 27/337 (8%)
Query: 213 LVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMG 272
+ +D R + RR A F + G ++ ++N+++ L S+
Sbjct: 191 IAMDSFVRVHYVRR-AIELF-EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--A 246
Query: 273 EKGLLSMET--FKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLP 330
+KG + ++ + I ++ ++ E ++ + + M + F + + L+E LGR+
Sbjct: 247 KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRI 306
Query: 331 KEAQLLFDKLKHRF-TPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIM 389
++ +FD +KH+ P+ Y ++ + ++ E+ R + M+D+ +P++ ++ +
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 390 LEGLLKIGKRSDAIKLFEVMKAKGPSPN---VRSY------------TIMIWK-----FC 429
+ GL+K K SDA+++FE M ++G P V S+ ++I++ C
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 430 KQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVR 489
+ + + Y L+ + ++ ++ EM+E G P D Y ++ + I + AV
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 490 IYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
+ +E +R GF P Y+ + + E+ K++
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 431 QNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPD----GLTYNALIKLMKIQKMPDE 486
++ Y+ ++ G R+ + D+LK M G PD + ++ +++ +++
Sbjct: 149 KDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRR---- 204
Query: 487 AVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDN-SYTVLI 545
A+ +++E G K + ++N +++ + + + V++ ++G P D+ SY ++I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMI 262
Query: 546 GGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSGKF 605
G E K L+EM+E G L Y+ L R GR E+ ++ G
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 606 EVSNV 610
+NV
Sbjct: 323 PDANV 327
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIA-MNAFAAAKERKKAVAIF 302
N TY+ ++S L + R+ + + EEM +G+L + + + A+ I+
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIY 418
Query: 303 ELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLL--FDKLKHRFTP-NLTTYTVLLGGWC 359
+ K + LL+ L S+ K LL +D+++ P ++ Y ++ G C
Sbjct: 419 QKSRKAGCRISESAYKLLLKRL--SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Query: 360 RVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVR 419
+ +L A V E + KGF P+ ++ + L+ K A KLF +K + N R
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENAR 536
Query: 420 SY 421
S+
Sbjct: 537 SF 538
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 191/422 (45%), Gaps = 18/422 (4%)
Query: 167 ITSVSYKSTADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARR 226
I S P + + +V+ + + ++E L +S NLV VL+R ++
Sbjct: 24 IFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGF 83
Query: 227 PAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL--LSMETFKI 284
PA RFF WA P FAH+ +Y+ ++ ILG ++QF + L E E +S + F I
Sbjct: 84 PAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWI 143
Query: 285 AMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLK-HR 343
A++ A +A F M ++ K VD ++ LL +L K AQ F K K
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 344 FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAI 403
P+ TY++L+ GW R+++ A +V++EM+++ D++A+N +L+ L K G
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 404 KLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERG 463
K+F+ M G P+ S+ I I +C + Y +L M+
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGD---------------VHSAYKVLDRMKRYD 308
Query: 464 CPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGR 523
P+ T+N +IK + + D+A + EM++ G P TYN IM +
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368
Query: 524 KVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADL 583
K+ M R C PD ++Y +++ LI R A + E M E+ V Y L
Sbjct: 369 KLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
Query: 584 SR 585
R
Sbjct: 429 VR 430
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Query: 436 YTCLITGFGNRRRMDIVYDLLKEMEERG-CPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
Y L+ G+ ++ +++D L E E + + + +P EA R + M
Sbjct: 105 YHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRM 164
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
V G KP + + ++ S + ++ + + G P +Y++L+ G +
Sbjct: 165 VEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDA 224
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAG 587
A K +EMLE+ +L YN L ++G
Sbjct: 225 SGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%)
Query: 459 MEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGN 518
M E G P + L+ + +K + A + + G P+ TY+++++ + + +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 519 YEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNK 578
RKV+DEM+ R C D +Y L+ L YK +EM G+K +
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 579 FAADLSRAGRSYVLDELAQKMR 600
F AG + ++ +M+
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMK 305
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIF 302
N T+N ++ L + + + +L+EM +KG T+ M E +A +
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 303 ELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRV 361
M++ K T N +L+ L R A +++ + R F P + TYTV++ G R
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Query: 362 K-NLMEAGRVWNEMIDKGFKP 381
K L EA R + MID+G P
Sbjct: 432 KGKLEEACRYFEMMIDEGIPP 452
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 180/366 (49%), Gaps = 17/366 (4%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKA 298
GF+ N Y +++ + + E + EMG+ GL++ E T+ + +N +K+
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
++E M + + T NC++ L + K+A +FD+++ R + N+ TY L+GG
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
CR L EA +V ++M G P+++ +N +++G +GK A+ L +K++G SP+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
+ +Y I++ FC++ +G ++KEMEERG P +TY LI
Sbjct: 373 LVTYNILVSGFCRKGDT------SG---------AAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
++A+++ M G P +HTY++++ + G +++ M+ + C P+
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQ 597
+ Y +I G + S A K L+EM EK + V Y L + +S + L +
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 598 KMRFSG 603
KM SG
Sbjct: 538 KMIDSG 543
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 164/416 (39%), Gaps = 89/416 (21%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAV 299
GF S +N +++ + + F S E K +L + +F I + A E +K+
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 300 AIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWC 359
LL + + F+PN+ YT L+ G C
Sbjct: 184 ----------------------------------DLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 360 RVKNLMEA----------GRVWNE-------------------------MIDKGFKPDVV 384
+ + +A G V NE M + G P++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 385 AHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ------------- 431
+N ++ L K G+ DA ++F+ M+ +G S N+ +Y +I C++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 432 -------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMP 484
N Y LI GF ++ L ++++ RG P +TYN L+ +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVL 544
A ++ KEM G KP+ TY +++ ++ ++ N E ++ M G PD ++Y+VL
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 545 IGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMR 600
I G + + EA + + M+EK + + YN + G SY +L ++M
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 57/332 (17%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERK 296
K G N RTY +++ L + + M E+M E G+ ++ T+ MN K
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLL 355
A +F+ M + + T N L+ L R EA + D++K PNL TY L+
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
G+C V L +A + ++ +G P +V +NI++ G + G S A K+ + M+ +G
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 416 PNVRSYTIMIWKFCKQN--------------------AAVYTCLITGFGNRRRM------ 449
P+ +YTI+I F + + Y+ LI GF + +M
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 450 ------------DIVYD-----------------LLKEMEERGCPPDGLTYNALIKLMKI 480
+++Y+ LLKEMEE+ P+ +Y +I+++
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 481 QKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKS 512
++ EA R+ ++M+ SG P+ ++I ++
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 55/252 (21%)
Query: 351 YTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMK 410
Y V++ + + ++L + +NEM+D GF P N +L +G S
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLT--FVVGSSSFN-------- 146
Query: 411 AKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLT 470
W F +N + + FG + +GC G
Sbjct: 147 -------------QWWSFFNENKSKVVLDVYSFG--------------ILIKGCCEAG-- 177
Query: 471 YNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMI 530
+I+K D + E+ GF P + Y ++ + G E + ++ EM
Sbjct: 178 --------EIEKSFDLLI----ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 531 RRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRS- 589
+ G ++ +YTVLI GL + ++ E+M E G+ + YN L + GR+
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 590 ---YVLDELAQK 598
V DE+ ++
Sbjct: 286 DAFQVFDEMRER 297
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 30/412 (7%)
Query: 212 NLVVDVLERFRHARRPAFRFFCWAGDKP-GFAHNSRTYNSMMSILGRARQFETMVSMLEE 270
NLV VL+R + A +FF + + + H++ +++ + I R T+ S++
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 271 MGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKL 329
M + S +TF I +A+A + KAV +F M+++ + + N +L+ L +SK
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 330 PKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIM 389
++A LF L+ RF+ + TY V+L GWC +K +A V EM+++G P++ +N M
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 390 LEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRM 449
L+G + G+ A + F MK + C+ + YT ++ GFG +
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRD---------------CEIDVVTYTTVVHGFGVAGEI 281
Query: 450 DIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMI 509
++ EM G P TYNA+I+++ + + AV +++EMVR G++P + TYN++
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 510 MKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
++ F G + G ++ M GC P+ +Y ++I +A E+M G
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM-GSGD 400
Query: 570 KAPVLD-YN---------KFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVL 611
P LD YN K + D+ AG+ +L E+ ++ KF + VL
Sbjct: 401 CLPNLDTYNILISGMFVRKRSEDMVVAGK--LLLEMVERGFIPRKFTFNRVL 450
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 210 SHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLE 269
S N ++DVL + + + F G F+ ++ TYN +++ ++ + +L+
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR---FSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 270 EMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSK 328
EM E+G+ ++ T+ + F A + + A F M K + V T ++ G +
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 329 LPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHN 387
K A+ +FD++ + P++ TY ++ C+ N+ A ++ EM+ +G++P+V +N
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 388 IMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRR 447
+++ GL G+ S +L + M+ +G PN ++Y +MI ++ + + V L
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI-RYYSECSEVEKAL-------- 390
Query: 448 RMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAV---RIYKEMVRSGFKPTIH 504
L ++M C P+ TYN LI M ++K ++ V ++ EMV GF P
Sbjct: 391 ------GLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKF 444
Query: 505 TYNMIMKSYFQTGNYEMGRKV 525
T+N ++ TGN +++
Sbjct: 445 TFNRVLNGLLLTGNQAFAKEI 465
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELM 305
TYN+M+ +L + E V M EEM +G ++ T+ + + A E + + + M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 306 NKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWC---RV 361
+ T N ++ ++A LF+K+ PNL TY +L+ G R
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS 421
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKG 413
++++ AG++ EM+++GF P N +L GLL G ++ A ++ + G
Sbjct: 422 EDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 32/373 (8%)
Query: 255 LGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGV 314
LG+ R+ ++ +LE G + + T+ + ++ + A E A+++ + M+ V
Sbjct: 150 LGKTRKAAKILEILE--GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDV 204
Query: 315 DTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNE 373
T N +L +L S K+A + D++ R P++ TYT+L+ CR + A ++ +E
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 374 MIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ-- 431
M D+G PDVV +N+++ G+ K G+ +AIK M + G PNV ++ I++ C
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 432 ------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNA 473
+ + LI + + D+L++M + GC P+ L+YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 474 LIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRG 533
L+ +K D A+ + MV G P I TYN ++ + + G E ++ +++ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 534 CCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLD 593
C P +Y +I GL ++G+A K L+EM K +K + Y+ LSR G+ +D
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK---VD 501
Query: 594 ELAQKMRFSGKFE 606
E ++F +FE
Sbjct: 502 E---AIKFFHEFE 511
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 156/334 (46%), Gaps = 28/334 (8%)
Query: 256 GRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGV- 314
GRA++FET+ S G S A+ + ++ V EL +KF +
Sbjct: 70 GRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMV 129
Query: 315 ------DTINC--LLENLGR-SKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLM 365
D I C L+ R K K A++L P++ TY V++ G+C+ +
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
A V + M PDVV +N +L L GK A+++ + M + P+V +YTI+I
Sbjct: 190 NALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
C+ +G G+ + LL EM +RGC PD +TYN L+ + + D
Sbjct: 247 EATCRD---------SGVGHAMK------LLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI 545
EA++ +M SG +P + T+N+I++S TG + K+ +M+R+G P ++ +LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 546 GGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKF 579
L + G A LE+M + G + L YN
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 172/414 (41%), Gaps = 93/414 (22%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFELMN 306
TYN M+S +A + +S+L+ M + T+ + + + + K+A+ + + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLM 365
+ V T L+E R A L D+++ R TP++ TY VL+ G C+ L
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
EA + N+M G +P+V+ HNI+L + G+ DA KL M KG SP+V ++ I+I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 426 WKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
C++ N+ Y L+ GF ++MD + L+ M RGC
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 466 PD-----------------------------------GLTYNALI----------KLMKI 480
PD +TYN +I K +K+
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 481 -------------------------QKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQ 515
+ DEA++ + E R G +P T+N IM +
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 516 TGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
+ + MI RGC P++ SYT+LI GL + + EA + L E+ KG+
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 21/258 (8%)
Query: 360 RVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVR 419
R L E + M+ G PD++ ++ G ++GK A K+ E+++ G P+V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 420 SYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMK 479
+Y +MI +CK + + L ++ PD +TYN +++ +
Sbjct: 174 TYNVMISGYCKAGE------------------INNALSVLDRMSVSPDVVTYNTILRSLC 215
Query: 480 IQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDN 539
+A+ + M++ P + TY +++++ + K+ DEM RGC PD
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 540 SYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
+Y VL+ G+ + R EA K+L +M G + V+ +N + GR ++L M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 600 ---RFSGKFEVSNVLARW 614
FS N+L +
Sbjct: 336 LRKGFSPSVVTFNILINF 353
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 17/264 (6%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERK 296
+ GF+ + T+N +++ L R + +LE+M + G ++ ++ F K+
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLL 355
+A+ E M + T N +L L + ++A + ++L + +P L TY ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
G + +A ++ +EM K KPD + ++ ++ GL + GK +AIK F + G
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 416 PNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALI 475
PN ++ ++ CK R+ D D L M RGC P+ +Y LI
Sbjct: 517 PNAVTFNSIMLGLCKS---------------RQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 476 KLMKIQKMPDEAVRIYKEMVRSGF 499
+ + + M EA+ + E+ G
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGL 585
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 375 IDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAA 434
++ F + V N L +++ G+ + K E M G P++ T +I FC+
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR---- 149
Query: 435 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
G R+ + ++L E G PD +TYN +I + A+ + M
Sbjct: 150 --------LGKTRKAAKILEIL---EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM 198
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
S P + TYN I++S +G + +V D M++R C PD +YT+LI
Sbjct: 199 SVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDE 594
G A K L+EM ++G V+ YN + + GR LDE
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR---LDE 292
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 196/436 (44%), Gaps = 60/436 (13%)
Query: 179 REIERVCKVIDELFSLDRNMEAVLDE---CGINLSHNLVVDVLERFRHARRPAFRFFCWA 235
+ +E + KV D L D + E V+ E C + ++ +LV+ VL RF + A+ FF WA
Sbjct: 97 KPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWA 156
Query: 236 GDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMG---EKGLLSMETFKIAMNAFAAA 292
+ G+ H+ TYN+M+ +LG+ R F+ M ++ EM E L++++T M A +
Sbjct: 157 NSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKS 216
Query: 293 KERKKAV-AIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTY 351
+ KAV A E+ Y K +N L++ L + + A +F KL P+ T+
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTF 276
Query: 352 TVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKA 411
+L+ G+C+ + +A + + M F PDVV + +E K G ++ E M+
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 412 KGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTY 471
G +PNV +YTI ++ G +++ + ++M+E GC PD Y
Sbjct: 337 NGCNPNVVTYTI---------------VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 472 NALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMG----RKVWD 527
++LI ++ +A I+++M G + + YN ++ + EM +++ D
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 528 E----------------------------------MIRRGCCPDDNSYTVLIGGLISQDR 553
E M++ D ++Y +LI GL +
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 554 SGEAYKYLEEMLEKGM 569
EA + EE + KGM
Sbjct: 502 VEEACLFFEEAVRKGM 517
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 378 GFKPDVVAHNIMLEGLLKIGKRSDA----IKLFEVMKAKGPSPNVRSYTIMIWKFCKQNA 433
G K D +A N +++ L+K A +KLF+ +K P+ R++ I+I FCK
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK-----PDARTFNILIHGFCKARK 288
Query: 434 AVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKE 493
F + R M DL+K E PD +TY + ++ + + +E
Sbjct: 289 ---------FDDARAM---MDLMKVTE---FTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
Query: 494 MVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDR 553
M +G P + TY ++M S ++ V+++M GC PD Y+ LI L R
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 554 SGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
+A + E+M +G++ VL YN + A + DE+A ++
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMIS----AALHHSRDEMALRL 435
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 25/260 (9%)
Query: 350 TYTVLLG--GWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIM---LEGLLKIGKRSDAIK 404
TY ++ G CR +LM + NEM +K + +V + M + L K GK + A+
Sbjct: 168 TYNAMVDVLGKCRNFDLM--WELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 405 LF-EVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERG 463
F E+ K+ G + + ++ K+N+ + ++D +K
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA--------HEVFLKLFDTIK------ 270
Query: 464 CPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGR 523
PD T+N LI + D+A + M + F P + TY +++Y + G++
Sbjct: 271 --PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 524 KVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADL 583
++ +EM GC P+ +YT+++ L + EA E+M E G Y+ L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 584 SRAGRSYVLDELAQKMRFSG 603
S+ GR E+ + M G
Sbjct: 389 SKTGRFKDAAEIFEDMTNQG 408
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKER-KKA 298
G N TY +M LG+++Q + + E+M E G + F ++ + R K A
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDA 397
Query: 299 VAIFELMNKYKFKAGVDTINCLLEN-LGRSKLPKEAQLL---FDKLKHRFTPNLTTYTVL 354
IFE M + V N ++ L S+ +LL D+ +PN+ TY L
Sbjct: 398 AEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPL 457
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
L C K + G + + M+ DV + +++ GL GK +A FE KG
Sbjct: 458 LKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Query: 415 SPNVRSYTIMIWKFCKQNAA 434
P + +++ + K+N A
Sbjct: 518 VPRDSTCKMLVDELEKKNMA 537
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 180/368 (48%), Gaps = 5/368 (1%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G N +S L A ++E S++ EM +G + T+ +N A + + A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+FE M + A V T ++++ ++ L ++A+ F++++ TPN+ TYT L+
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ + K + A ++ M+ +G P++V ++ +++G K G+ A ++FE M P+
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 418 VRSYTIMIWKFCKQ-NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIK 476
V Y ++ N Y L+ GF R++ LL M GC P+ + Y+ALI
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 477 -LMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCC 535
L K+ K+ DEA + EM GF T++TY+ ++ YF+ ++ KV +M+ C
Sbjct: 683 GLCKVGKL-DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 536 PDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDEL 595
P+ YT +I GL ++ EAYK ++ M EKG + V+ Y G+ EL
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 596 AQKMRFSG 603
++M G
Sbjct: 802 LERMGSKG 809
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 40/364 (10%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLS-METFKIAMNAFAAAKERKKA 298
GF ++ TY+ +++ L A + E + EEM GL++ + T+ I +++F A ++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK-LKHRFTPNLTTYTVLLGG 357
F M + V T L+ ++K A LF+ L PN+ TY+ L+ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 358 WCRVKNLMEAGRVWNEM--------IDKGFK--------PDVVAHNIMLEGLLKIGKRSD 401
C+ + +A +++ M +D FK P+VV + +L+G K + +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 402 AIKLFEVMKAKGPSPNVRSYTIMIWKFCK--------------------QNAAVYTCLIT 441
A KL + M +G PN Y +I CK Y+ LI
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 442 GFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIK-LMKIQKMPDEAVRIYKEMVRSGFK 500
+ +R D+ +L +M E C P+ + Y +I L K+ K DEA ++ + M G +
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK-TDEAYKLMQMMEEKGCQ 776
Query: 501 PTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKY 560
P + TY ++ + G E ++ + M +G P+ +Y VLI A+
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 561 LEEM 564
LEEM
Sbjct: 837 LEEM 840
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 161/391 (41%), Gaps = 72/391 (18%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G N TY +++ +A++ + E M +G L ++ T+ ++ A + +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 299 VAIFELMNKYKFKAGVD----------------TINCLLENLGRSKLPKEAQLLFDKLKH 342
IFE M K VD T LL+ +S +EA+ L D +
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 343 R-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGF---------------------- 379
PN Y L+ G C+V L EA V EM + GF
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 380 -------------KPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIW 426
P+VV + M++GL K+GK +A KL ++M+ KG PNV +YT MI
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI- 786
Query: 427 KFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDE 486
GFG +++ +LL+ M +G P+ +TY LI D
Sbjct: 787 --------------DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 487 AVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIG 546
A + +EM ++ + Y +++ + + +G + DE+ + P + Y +LI
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLID 890
Query: 547 GLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
LI R A + LEE+ A ++DY+
Sbjct: 891 NLIKAQRLEMALRLLEEV--ATFSATLVDYS 919
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 174/437 (39%), Gaps = 64/437 (14%)
Query: 160 GNNSESEITSVSYKSTADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLE 219
GN + ++ + +S+ D R I +D++F R + L + LS +LV++VL
Sbjct: 83 GNVNVHQVVPIITQSSIDARAIADAVSGVDDVFG--RKSQKFLRQFREKLSESLVIEVL- 139
Query: 220 RFRHARRPA--FRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL 277
R RP+ FF WAG + G+ H + YN+++ ++ R + L+++ +
Sbjct: 140 --RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD--- 194
Query: 278 SMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLF 337
E F +N R + +I LE LGR K
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSI------------------ALEELGRLK--------- 227
Query: 338 DKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIG 397
RF P+ +TY L+ + + L A + EM + D L K+G
Sbjct: 228 ---DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284
Query: 398 KRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
K +A+ L E + N T+ YT LI+G + D L
Sbjct: 285 KWREALTLVE-------TENFVPDTVF-----------YTKLISGLCEASLFEEAMDFLN 326
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
M C P+ +TY+ L+ +K R+ M+ G P+ +N ++ +Y +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGL------ISQDRSGEAYKYLEEMLEKGMKA 571
++ K+ +M++ G P Y +LIG + ++ D A K EML G+
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 572 PVLDYNKFAADLSRAGR 588
++ + F L AG+
Sbjct: 447 NKINVSSFTRCLCSAGK 463
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 162/346 (46%), Gaps = 32/346 (9%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKAVAIF 302
N TY +++ ++ + E +L+ M +G + + ++ + +A +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 303 ELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK-LKHRFTPNLTTYTVLLGGWCRV 361
M+++ F A + T + L++ + K A + K L++ PN+ YT ++ G C+V
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
EA ++ M +KG +P+VV + M++G IGK ++L E M +KG +PN +Y
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 422 TIMIWKFCKQNA--------------------AVYTCLITGFGNRRRMDIVYDLLKEMEE 461
++I CK A A Y +I GF N+ ++ + LL E+ +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-NKEFIESL-GLLDEIGQ 875
Query: 462 RGCPPDGLTYNALI-KLMKIQKMPDEAVRIYKEMVRSGFKPTI----HTYNMIMKSYFQT 516
P Y LI L+K Q++ + A+R+ +E+ + F T+ TYN +++S
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRL-EMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLA 932
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLE 562
E +++ EM ++G P+ S+ LI GL + EA L+
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 147/366 (40%), Gaps = 16/366 (4%)
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERK--KA 298
F + TYN ++ +A + ++ + EM L M+ F + A++ K K +A
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL-RMDGFTLRCFAYSLCKVGKWREA 289
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGG 357
+ + E N F L+ L + L +EA ++++ PN+ TY+ LL G
Sbjct: 290 LTLVETEN---FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
K L RV N M+ +G P N ++ G S A KL + M G P
Sbjct: 347 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 406
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
Y I+I C ++ N +D+ EM G + + ++ +
Sbjct: 407 YVVYNILIGSICGDKDSL---------NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
+ ++A + +EM+ GF P TY+ ++ E+ +++EM R G D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQ 597
+YT+++ +A K+ EM E G V+ Y +A + +EL +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 598 KMRFSG 603
M G
Sbjct: 578 TMLSEG 583
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 237 DKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKER 295
++ G N TY +M+ G + ET + +LE MG KG+ + T+++ ++
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 296 KKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFT-PNLTTYTVL 354
A + E M + + ++E + + E+ L D++ T P L+ Y +L
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVV----AHNIMLEGLLKIGKRSDAIKLFEVMK 410
+ + + L A R+ E+ F +V +N ++E L K A +LF M
Sbjct: 889 IDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 411 AKGPSPNVRSYTIMI 425
KG P ++S+ +I
Sbjct: 947 KKGVIPEMQSFCSLI 961
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 202/449 (44%), Gaps = 47/449 (10%)
Query: 189 DELFSLDRNMEAVLDECGI-------NLSHNLVVD----VLERFRHARRPAFRFFCWAGD 237
DE+ S+ ++ ++DE G+ N NL+VD L HA+ W G
Sbjct: 135 DEILSV---VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV-----W-GI 185
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERK 296
KP + T+N ++ L RA Q + MLE+M GL+ E TF M + +
Sbjct: 186 KPDVS----TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR--FTPNLTTYTVL 354
A+ I E M ++ ++N ++ + ++A ++ ++ F P+ T+ L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
+ G C+ ++ A + + M+ +G+ PDV +N ++ GL K+G+ +A+++ + M +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 415 SPNVRSYTIMIWKFCKQN--------------------AAVYTCLITGFGNRRRMDIVYD 454
SPN +Y +I CK+N + LI G R + +
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 455 LLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYF 514
L +EM +GC PD TYN LI + + DEA+ + K+M SG ++ TYN ++ +
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 515 QTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVL 574
+ +++DEM G + +Y LI GL R +A + +++M+ +G K
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 575 DYNKFAADLSRAGRSYVLDELAQKMRFSG 603
YN R G ++ Q M +G
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 188/435 (43%), Gaps = 59/435 (13%)
Query: 228 AFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEM-GEKGLLSMETFKIAM 286
A R F A KP F+ Y ++ LGR+ F+ M +LE+M + + TF I +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 287 NAFAAAKERKKAVAIFEL------------------------------------MNKYKF 310
++A + + + +++ + M+ +
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 311 KAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWCRVKNLMEAGR 369
K V T N L++ L R+ + A L+ + + + P+ T+T ++ G+ +L A R
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 370 VWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAK-GPSPNVRSYTIMIWKF 428
+ +M++ G V+ N+++ G K G+ DA+ + M + G P+ ++ ++
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 429 CKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDG 468
CK + Y +I+G + ++L +M R C P+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 469 LTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDE 528
+TYN LI + + +EA + + + G P + T+N +++ T N+ + ++++E
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 529 MIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
M +GC PD+ +Y +LI L S+ + EA L++M G V+ YN +A +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 589 SYVLDELAQKMRFSG 603
+ +E+ +M G
Sbjct: 486 TREAEEIFDEMEVHG 500
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 21/326 (6%)
Query: 281 TFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL 340
TF +N A K A+ I ++M + + V T N ++ L + KEA + D++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 341 KHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKR 399
R +PN TY L+ C+ + EA + + KG PDV N +++GL
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 400 SDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAAVYTCL 439
A++LFE M++KG P+ +Y ++I C + + Y L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 440 ITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGF 499
I GF + ++ EME G + +TYN LI + + ++A ++ +M+ G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 500 KPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYK 559
KP +TYN ++ + + G+ + + M GC PD +Y LI GL R A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 560 YLEEMLEKGMKAPVLDYNKFAADLSR 585
L + KG+ YN L R
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFR 622
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 165/375 (44%), Gaps = 24/375 (6%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIF 302
N+ TYN+++S L + Q E + + KG+L + TF + + + A+ +F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 303 ELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRV 361
E M + T N L+++L + KL + +L ++ TY L+ G+C+
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
EA +++EM G + V +N +++GL K + DA +L + M +G P+ +Y
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 422 TIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQ 481
++ FC+ G ++ DIV + M GC PD +TY LI +
Sbjct: 544 NSLLTHFCR-----------GGDIKKAADIV----QAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 482 KMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDN-S 540
+ A ++ + + G T H YN +++ F+ ++ EM+ + P D S
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 541 YTVLIGGLISQDRS-GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELA--- 596
Y ++ GL + EA +L E+LEKG A L L +L
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 597 -QKMRFSGKFEVSNV 610
QK RFS + EVS V
Sbjct: 709 MQKARFSEE-EVSMV 722
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 50/271 (18%)
Query: 196 RNMEAVLDECGIN------LSHNLVVDVLERFRHARRPA--FRFFCWAGDKPGFAHNSRT 247
R E + DE ++ +++N ++D L + R A G KP + T
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP----DKYT 542
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMN 306
YNS+++ R + +++ M G + T+ ++ A + A + +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL--KHRFTPNLTTYTVLLGGWCRVKN- 363
N +++ L R + EA LF ++ ++ P+ +Y ++ G C
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 364 LMEAGRVWNEMIDKGFKPD-----VVAHNI----------------------------ML 390
+ EA E+++KGF P+ ++A + M+
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMV 722
Query: 391 EGLLKIGKRSDAI-KLFEVMKAKGPSPNVRS 420
+GLLKI K DA+ L V+ ++ P RS
Sbjct: 723 KGLLKIRKFQDALATLGGVLDSRQPRRTYRS 753
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 162/324 (50%), Gaps = 17/324 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G N +YN +++ L R + + + +L EM +G L T+ + + +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ + M ++ V T L+ ++ ++ A D+++ R PN TYT L+ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ + + EA RV EM D GF P VV +N ++ G GK DAI + E MK KG SP+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
V SY+ ++ FC+ +D + +EM E+G PD +TY++LI+
Sbjct: 450 VVSYSTVLSGFCRS---------------YDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
Q+ EA +Y+EM+R G P TY ++ +Y G+ E ++ +EM+ +G PD
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 538 DNSYTVLIGGLISQDRSGEAYKYL 561
+Y+VLI GL Q R+ EA + L
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLL 578
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 23/360 (6%)
Query: 240 GFAHNSRTYNSMMSILGRA-RQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKK 297
GF +YN+++ R+ R ++ +EM E + ++ T+ I + F A
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 298 AVAIFELMNKYKFKAGVDTINCLLENLGR-SKLPKEAQLLFDKLKHRFTPNLTTYTVLLG 356
A+ +F+ M V T N L++ + K+ +LL PNL +Y V++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 357 GWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSP 416
G CR + E V EM +G+ D V +N +++G K G A+ + M G +P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 417 NVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLL 456
+V +YT +I CK N YT L+ GF + M+ Y +L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQT 516
+EM + G P +TYNALI + ++A+ + ++M G P + +Y+ ++ + ++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDY 576
+ + +V EM+ +G PD +Y+ LI G Q R+ EA EEML G+ Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 173/368 (47%), Gaps = 22/368 (5%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIF 302
N TYN ++ A + +++ ++M KG L ++ T+ ++ + ++ +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 303 ELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRV 361
M + + + N ++ L R KE + ++ R ++ + TY L+ G+C+
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
N +A + EM+ G P V+ + ++ + K G + A++ + M+ +G PN R+Y
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 422 TIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEE 461
T ++ F ++ + Y LI G +M+ +L++M+E
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 462 RGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEM 521
+G PD ++Y+ ++ DEA+R+ +EMV G KP TY+ +++ + + +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 522 GRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAA 581
+++EM+R G PD+ +YT LI + +A + EM+EKG+ V+ Y+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 582 DLSRAGRS 589
L++ R+
Sbjct: 564 GLNKQSRT 571
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 182/418 (43%), Gaps = 55/418 (13%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKA 298
G + TY S++ + +A + L++M +GL E T+ ++ F+ +A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ MN F V T N L+ + ++A + + +K + +P++ +Y+ +L G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+CR ++ EA RV EM++KG KPD + ++ +++G + + +A L+E M G P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 418 VRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLK 457
+YT +I +C + + Y+ LI G + R LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 458 EMEERGCPPDGLTYNALIK------------LMK---IQKMPDEAVRIYKEMVRSGFKPT 502
++ P +TY+ LI+ L+K ++ M EA ++++ M+ KP
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 503 IHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLE 562
YN+++ + + G+ ++ EM++ G + L+ L + + E +
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 563 EMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSGKFEVSNVLARWAETTKN 620
+L + +LS A ++ VL E+ + G +V VL AE K+
Sbjct: 700 HVLR-------------SCELSEAEQAKVLVEINHR---EGNMDV--VLDVLAEMAKD 739
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 33/312 (10%)
Query: 302 FELMNKYKFKAGVDTINCLLENLGRSKLPKE-AQLLFDKLKHRFTPNLTTYTV---LLGG 357
++ K+K T L E++ L E A L+F L+ + +T +V ++
Sbjct: 87 LHILTKFKL---YKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKR--SDAIKLFEVMKAKGPS 415
+ R+ + +A + + GF P V+++N +L+ ++ KR S A +F+ M S
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR-SKRNISFAENVFKEMLESQVS 202
Query: 416 PNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALI 475
PNV +Y I+I FC GN +D+ L +ME +GC P+ +TYN LI
Sbjct: 203 PNVFTYNILIRGFCFA------------GN---IDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 476 ----KLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIR 531
KL KI D+ ++ + M G +P + +YN+++ + G + V EM R
Sbjct: 248 DGYCKLRKI----DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 532 RGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYV 591
RG D+ +Y LI G + +A EML G+ V+ Y + +AG
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 592 LDELAQKMRFSG 603
E +MR G
Sbjct: 364 AMEFLDQMRVRG 375
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 37/335 (11%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
GF+ + TYN++++ + E +++LE+M EKGL + ++ ++ F + + +A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK-LKHRFTPNLTTYTVLLGG 357
+ + M + K T + L++ + KEA L+++ L+ P+ TYT L+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+C +L +A ++ NEM++KG PDVV +++++ GL K + +A +L + + P+
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 418 ---------------VRSYTIMIWKFC--------------------KQNAAVYTCLITG 442
+S +I FC K + Y +I G
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 443 FGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPT 502
+ Y L KEM + G +T AL+K + + +E + ++RS
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 503 IHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
++++ + GN ++ V EM + G P+
Sbjct: 710 AEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKA 298
G ++ TY+S++ R+ + + EEM GL E T+ +NA+ + +KA
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFT-PNLTTY------ 351
+ + M + V T + L+ L + +EA+ L KL + + P+ TY
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 352 ---------TVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDA 402
L+ G+C + EA +V+ M+ K KPD A+NIM+ G + G A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 403 -------------------IKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGF 443
I L + + +G + S + + + C+ + A ++
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 444 GNRR-RMDIVYDLLKEMEERGCPPDGLT 470
+R MD+V D+L EM + G P+G++
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 19/370 (5%)
Query: 247 TYNSMMSILGR-ARQFETMVSMLEEMGEKGLLS-METFKIAMNAFAAAKERKKAVAIFEL 304
TYN ++++ G+ + + S++E+M G+ T+ + ++A +FE
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 305 MNKYKFKAGVDTINCLLENLGRSKLPKEA-QLLFDKLKHRFTPNLTTYTVLLGGWCRVKN 363
M F T N LL+ G+S PKEA ++L + + + F+P++ TY L+ + R
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 364 LMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTI 423
L EA + N+M +KG KPDV + +L G + GK A+ +FE M+ G
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG---------- 414
Query: 424 MIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKM 483
CK N + I +GNR + + + E+ G PD +T+N L+ + M
Sbjct: 415 -----CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 484 PDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTV 543
E ++KEM R+GF P T+N ++ +Y + G++E V+ M+ G PD ++Y
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 544 LIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
++ L ++ K L EM + K L Y + ++ LA+++ +SG
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV-YSG 588
Query: 604 KFEVSNVLAR 613
E VL +
Sbjct: 589 VIEPRAVLLK 598
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 27/308 (8%)
Query: 274 KGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEA 333
KGL + F +A+ AF ++K Y+ + ++ LG+ A
Sbjct: 143 KGLGFHKKFDLALRAFDWFMKQKD----------YQSMLDNSVVAIIISMLGKEGRVSSA 192
Query: 334 QLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEG 392
+F+ L+ F+ ++ +YT L+ + EA V+ +M + G KP ++ +N++L
Sbjct: 193 ANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNV 252
Query: 393 LLKIGKRSDAI-KLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDI 451
K+G + I L E MK+ G +P+ +Y +I TC G ++ +
Sbjct: 253 FGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-----------TCCKRGSLHQEAAQV 301
Query: 452 VYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMK 511
+EM+ G D +TYNAL+ + P EA+++ EMV +GF P+I TYN ++
Sbjct: 302 ----FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 512 SYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKA 571
+Y + G + ++ ++M +G PD +YT L+ G + A EEM G K
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 572 PVLDYNKF 579
+ +N F
Sbjct: 418 NICTFNAF 425
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 162/386 (41%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
GF+ + TYNS++S R + + + +M EKG + T+ ++ F A + + A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGG 357
++IFE M K + T N ++ G E +FD++ +P++ T+ LL
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ + E V+ EM GF P+ N ++ + G A+ ++ M G +P+
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 418 VRSYTIMI--------WKF------------CKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y ++ W+ CK N Y L+ + N + + +++ L +
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
E+ P + L+ + + EA R + E+ GF P I T N ++ Y +
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
V D M RG P +Y L+ G++ + L E+L KG+K ++ YN
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
R R + +MR SG
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSG 729
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 159/370 (42%), Gaps = 52/370 (14%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLS-METFKIAMNAFAAAKERKKA 298
G + + T+N+++++ G+ + + +EM G + ETF ++A++ ++A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGG 357
+ ++ M + T N +L L R + ++++ + +++ R PN TY LL
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 358 WCRVKN-----------------------------------LMEAGRVWNEMIDKGFKPD 382
+ K L EA R ++E+ ++GF PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 383 VVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITG 442
+ N M+ + + A + + MK +G +P++ +Y +++ +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS---------AD 679
Query: 443 FGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPT 502
FG ++L+E+ +G PD ++YN +I +A RI+ EM SG P
Sbjct: 680 FGKSE------EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 503 IHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLE 562
+ TYN + SY +E V MI+ GC P+ N+Y ++ G +R EA ++E
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 563 EMLEKGMKAP 572
++ AP
Sbjct: 794 DLRNLDPHAP 803
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 175/432 (40%), Gaps = 92/432 (21%)
Query: 240 GFAHNSRTYNSMMSILGRARQ----------------------FETMVS------MLEE- 270
GF+++ TYN+++ + G++ + + +++S ML+E
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 271 ------MGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLEN 323
M EKG + T+ ++ F A + + A++IFE M K + T N ++
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 324 LGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPD 382
G E +FD++ +P++ T+ LL + + E V+ EM GF P+
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 383 VVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI--------WKF------ 428
N ++ + G A+ ++ M G +P++ +Y ++ W+
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 429 ------CKQNAAVYTCLITGFGNRRRMDIVY----------------------------D 454
CK N Y L+ + N + + +++ D
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 455 LLKEME-------ERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYN 507
LL E E ERG PD T N+++ + ++M +A + M GF P++ TYN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 508 MIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEK 567
+M + ++ ++ ++ E++ +G PD SY +I R +A + EM
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 568 GMKAPVLDYNKF 579
G+ V+ YN F
Sbjct: 729 GIVPDVITYNTF 740
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 177/368 (48%), Gaps = 16/368 (4%)
Query: 237 DKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKER 295
++ G N TY ++ L +FE +L +M EKGL+ ++ T+ +N +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 296 KKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLL 355
+ AV + ELM K T N L++ +S + K +L L+ + P++ TY L+
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
G CR N A R+ + M D+G PD + M++ L K + +A LF+ ++ KG +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 416 PNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALI 475
PNV YT +I +CK ++D + +L++M + C P+ LT+NALI
Sbjct: 530 PNVVMYTALIDGYCKAG---------------KVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 476 KLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCC 535
+ EA + ++MV+ G +PT+ T +++ + G+++ + +M+ G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 536 PDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDEL 595
PD ++YT I + R +A + +M E G+ + Y+ G++ ++
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 596 AQKMRFSG 603
++MR +G
Sbjct: 695 LKRMRDTG 702
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 163/363 (44%), Gaps = 41/363 (11%)
Query: 226 RPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIA 285
+ A F W P + H+ +Y S++++L G G++ FKI
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINN-------------GYVGVV----FKIR 146
Query: 286 MNAFAAAKERKKAVAIFEL---MNK-----YKFKAGVDTINCLLENLGRSKLPKE-AQLL 336
+ + A+ + +L MNK K+K + N LL +L R L E Q+
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 337 FDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKI 396
+ L+ + PN+ TY ++ G+C++ N+ EA + +++++ G PD + ++ G +
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 397 GKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLL 456
A K+F M KG C++N YT LI G RR+D DL
Sbjct: 267 KDLDSAFKVFNEMPLKG---------------CRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQT 516
+M++ C P TY LIK + + EA+ + KEM +G KP IHTY +++ S
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 517 GNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDY 576
+E R++ +M+ +G P+ +Y LI G + +A +E M + + Y
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 577 NKF 579
N+
Sbjct: 432 NEL 434
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 160/377 (42%), Gaps = 14/377 (3%)
Query: 237 DKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKER 295
++ G N Y +++ +A + + MLE+M K L TF ++ A +
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 296 KKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFT-PNLTTYTVL 354
K+A + E M K + V T L+ L + A F ++ T P+ TYT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
+ +CR L++A + +M + G PD+ ++ +++G +G+ + A + + M+ G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 415 SPNVRSYTIMI-----WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGL 469
P+ ++ +I K+ KQ + + N D V +LL++M E P+
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPE--LCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 470 TYNALIKLMKIQKMPDEAV--RIYKEMVRS-GFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
+Y LI + I ++ + V +++ M R+ G P+ +N ++ + + KV
Sbjct: 762 SYEKLI--LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA 586
D+MI G P S VLI GL + + +L+ G L + + +
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 587 GRSYVLDELAQKMRFSG 603
G EL M +G
Sbjct: 880 GLVEAFYELFNVMEKNG 896
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 48/309 (15%)
Query: 209 LSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSML 268
L H L+ D F HA F+ +G KP ++ TY + + R + M+
Sbjct: 608 LIHRLLKD--GDFDHAYS-RFQQMLSSGTKP----DAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 269 EEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRS 327
+M E G+ + T+ + + + A + + M + T L+++L
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 328 KLPKE-------------------AQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAG 368
K K+ +LL ++H TPN +Y L+ G C V NL A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 369 RVWNEMI-DKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWK 427
+V++ M ++G P + N +L K+ K ++A K+ + M G P + S ++I
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 428 FCK--------------------QNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPD 467
K ++ + +I G G + ++ Y+L ME+ GC
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 468 GLTYNALIK 476
TY+ LI+
Sbjct: 901 SQTYSLLIE 909
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 471 YNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMI 530
YN L+ + + DE ++Y EM+ P I+TYN ++ Y + GN E + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 531 RRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSY 590
G PD +YT LI G + A+K EM KG + + Y L A R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 591 VLDELAQKMR 600
+L KM+
Sbjct: 306 EAMDLFVKMK 315
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 443 FGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPT 502
FG M VY ++ +E++ CP + TYN ++ +EA + ++V +G P
Sbjct: 196 FGLVDEMKQVY--MEMLEDKVCP-NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPD 252
Query: 503 IHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLE 562
TY ++ Y Q + + KV++EM +GC ++ +YT LI GL R EA
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 563 EMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+M + V Y L + R L ++M +G
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 34/388 (8%)
Query: 193 SLDRNMEAVLDECGINLSHNLVVDVLERFRHAR-RP--AFRFFCWAGDKPGFAHNSRTYN 249
+L ++ L GI+LS +L+ VL+R R + P F+ +A GF H+S + +
Sbjct: 53 NLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLD 112
Query: 250 SMMSILGRARQFETMVSMLEEMGEK--GLLSMETFKIAMNAFAAAKERKKAVAIFELMNK 307
+M+ ILGR R+F+ + +L E K L+S T ++ + A ++ V F
Sbjct: 113 TMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESF----- 167
Query: 308 YKFKAGV----DT--INCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRV 361
+KFK V DT N LL L + K +A+ ++ LKH+F P+L T+ +LL GW
Sbjct: 168 WKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW--- 224
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
K+ EA + EM KG KPDVV +N +++ K + A KL + M+ + +P+V
Sbjct: 225 KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDV--- 281
Query: 422 TIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQ 481
YT +I G G + D ++LKEM+E GC PD YNA I+ I
Sbjct: 282 ------------ITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIA 329
Query: 482 KMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSY 541
+ +A ++ EMV+ G P TYN+ + + +++ M+ C P+ S
Sbjct: 330 RRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSC 389
Query: 542 TVLIGGLISQDRSGEAYKYLEEMLEKGM 569
LI ++ A + E+M+ KG
Sbjct: 390 MFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 316 TINCLLENLGRS-KLPKEAQLLFD-KLKHRFTPNLTTYTVLLG---GWCRVKNLMEAGRV 370
+++ +L LGR+ K + +LL + K K R + T V+LG C V+ +E+
Sbjct: 110 SLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWK 169
Query: 371 WNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI--WKF 428
+ ++ F D N +L L + +DA ++ +K + P+++++ I++ WK
Sbjct: 170 FKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSLKHQF-QPDLQTFNILLSGWKS 226
Query: 429 CKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAV 488
++ A + EM+ +G PD +TYN+LI + + ++A
Sbjct: 227 SEEAEAFFE--------------------EMKGKGLKPDVVTYNSLIDVYCKDREIEKAY 266
Query: 489 RIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGL 548
++ +M P + TY ++ G + R+V EM GC PD +Y I
Sbjct: 267 KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNF 326
Query: 549 ISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA---GRSYVL 592
R G+A K ++EM++KG+ YN F LS A GRS+ L
Sbjct: 327 CIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWEL 373
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 9/188 (4%)
Query: 417 NVRSYTIMIWKFCKQ-----NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTY 471
+VR WKF + + A + L+ + M ++ ++ + PD T+
Sbjct: 159 SVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTF 217
Query: 472 NALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIR 531
N L+ K + A ++EM G KP + TYN ++ Y + E K+ D+M
Sbjct: 218 NILLSGWKSSEE---AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 274
Query: 532 RGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYV 591
PD +YT +IGGL + +A + L+EM E G V YN + A R
Sbjct: 275 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD 334
Query: 592 LDELAQKM 599
D+L +M
Sbjct: 335 ADKLVDEM 342
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 467 DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
D +NAL++ + +K +A +Y + + F+P + T+N+++ + + E +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGE-AYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
+EM +G PD +Y LI + +DR E AYK +++M E+ V+ Y L
Sbjct: 235 EEMKGKGLKPDVVTYNSLID-VYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 586 AGRSYVLDELAQKMRFSG 603
G+ E+ ++M+ G
Sbjct: 294 IGQPDKAREVLKEMKEYG 311
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 210/505 (41%), Gaps = 100/505 (19%)
Query: 181 IERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRP--AFRFFCWAGDK 238
+ ++ ++D S++ N++ + I LS N V VL+ +P A+ FFCW+ +
Sbjct: 86 VSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQ 145
Query: 239 PGFAHNSRTYNSMMSILGRAR---------------QFETMVS-------------MLEE 270
+ HN Y S++ +L A+ +F VS M+EE
Sbjct: 146 KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEE 205
Query: 271 -------MGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLE 322
M E G+ ++ T+ MN +A A +FE+M + K + T N +++
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIK 265
Query: 323 NLGRSKLPKEAQLLFDKLKHR---------------------FTPNLTTY---------- 351
++ ++A ++ R F + Y
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Query: 352 -----TVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF 406
++++GG C+ L E V+ MI KG KP+V + ++++G K G DAI+L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 407 EVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNR 446
M +G P+V +Y++++ CK N+ Y+ LI G G
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 447 RRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM-VRSGFKPTIHT 505
R+D L +EM E+GC D YNALI + DEA+ ++K M G T++T
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT 505
Query: 506 YNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEML 565
Y +++ F+ E K+WD MI +G P + L GL + A K L+E+
Sbjct: 506 YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 565
Query: 566 EKGMKAPVLDY--NKFAADLSRAGR 588
G+ +LD L +AGR
Sbjct: 566 PMGV---ILDAACEDMINTLCKAGR 587
>sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protein At3g60050
OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1
Length = 473
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 26/383 (6%)
Query: 197 NMEAVLDECGINLSHNLVVDVL---------ERFRHARRPAFRFFCWAGDKPGFAHNSRT 247
N ++VLDE + +S LV +VL + + A+RFF W+G++ F H +
Sbjct: 92 NSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNS 151
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMN 306
Y+ +M I +++ M +++EM + G + TF + + + A K+AV F
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK-LKHRFTPNLTTYTVLLGGWCRVKNLM 365
+ ++ + N +L +L K K + ++ + L+ F+P++ TY +LL R+ +
Sbjct: 212 TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
R+++EM GF PD +NI+L L K K A+ MK G P+V YT
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT-- 329
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
LI G ++ L EM + GC PD + Y +I + D
Sbjct: 330 -------------LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI 545
+A +++EM G P + TYN +++ G + + EM RGC P+ Y+ L+
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 546 GGLISQDRSGEAYKYLEEMLEKG 568
L + EA K + EM++KG
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
>sp|Q9FNG8|PP366_ARATH Putative pentatricopeptide repeat-containing protein At5g06400,
mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3
SV=1
Length = 1030
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 205/452 (45%), Gaps = 29/452 (6%)
Query: 187 VIDELFSLDR------NMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPG 240
V+ E+ S+ R +ME L++ +V +VL+R A RFF W K G
Sbjct: 125 VVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDG 184
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAV 299
F+H YN+M+SI G AR + + ++ EM + G + T+ I ++ + AK+ K +
Sbjct: 185 FSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGL 244
Query: 300 AIFELMNKYKFKAGVDTINCLLENL---GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLG 356
+FE M K F+ N ++ +L GR L E + ++ T L TY +LL
Sbjct: 245 LVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALE--FYKEMMEKGITFGLRTYKMLLD 302
Query: 357 GWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSP 416
+ + + + ++M+ + A +L+ GK +A++L +K K
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 417 NVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIK 476
+ + + I++ C+ N V I RR++D D Y +I
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD----------------DSNVYGIIIS 406
Query: 477 LMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCP 536
Q +A+ ++ + +SG P + TY IM+ F+ +E G +++EMI G P
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 537 DDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELA 596
D + T ++ G + Q+R EA+K M EKG+K Y+ F +L R+ R + ++
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 597 QKMRFSGKFEVSNVLARWAETTKNRVYRKDRI 628
+M S K + + + W ++ + K++I
Sbjct: 527 NQMHAS-KIVIRDDIFSWVISSMEKNGEKEKI 557
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 174 STADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFC 233
S D +++ +C+V+ +R EA L++ + + LVV+VL + RFF
Sbjct: 608 SAVDKMDVQEICRVLSSSRDWERTQEA-LEKSTVQFTPELVVEVLRHAKIQGNAVLRFFS 666
Query: 234 WAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKG-LLSMETFKIAMNAFAAA 292
W G + G+ HNS YN + + G + F+ M S+ EM +G L++ +T+ I + +
Sbjct: 667 WVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRT 726
Query: 293 KERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSK---LPKEAQLLFDKLKHRFTPNLT 349
A+ F+ M T CL+ L K + + + + ++ F P+
Sbjct: 727 GLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 350 TYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVM 409
LG C V N +A + + GF P VA++I + L +IGK +A L E+
Sbjct: 787 LVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEA--LSELA 843
Query: 410 KAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGL 469
+G + YT Y ++ G R + D + M+E G P
Sbjct: 844 SFEGERSLLDQYT-------------YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH 890
Query: 470 TYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEM 529
Y +LI +K ++ + ++M +P++ TY ++ Y G E + M
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 530 IRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
RG PD +Y+ I L +S +A K L EML+KG+ +++ L+R G+
Sbjct: 951 EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
>sp|Q9M8M3|PP136_ARATH Pentatricopeptide repeat-containing protein At1g80550,
mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2
SV=1
Length = 448
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 30/382 (7%)
Query: 214 VVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEM-- 271
V + L + + + A FF W + GF H + T+N ++ ILG+ +FE +++ M
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG 109
Query: 272 GEKGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPK 331
+ + + TF+I + A ++A+ ++ ++ + + N L++ L K
Sbjct: 110 NTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVV 168
Query: 332 EAQ-LLFDK--LKHRFT-PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHN 387
EA+ L F K + + F+ N + ++L GW ++ + W +M +G D+ +++
Sbjct: 169 EAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYS 228
Query: 388 IMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKF------------------- 428
I ++ + K GK A+KL++ MK++ +V +Y +I
Sbjct: 229 IYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRER 288
Query: 429 -CKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEA 487
C+ N A + +I RM Y +L EM +RGC PD +TY L +++K P E
Sbjct: 289 GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS--RLEK-PSEI 345
Query: 488 VRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGG 547
+ ++ M+RSG +P + TY M+M+ + + G + VW M G PD +Y +I
Sbjct: 346 LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA 405
Query: 548 LISQDRSGEAYKYLEEMLEKGM 569
LI + A +Y EEM+E+G+
Sbjct: 406 LIQKGMLDMAREYEEEMIERGL 427
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELM 305
YN+++ +G ++ E + + EM E+G ++ T + + A + + M
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 306 NKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWCRVKNL 364
K + T CL L + P E LF ++ + P + TY +L+ + R L
Sbjct: 321 PKRGCQPDSITYMCLFSRLEK---PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFL 377
Query: 365 MEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVR 419
VW M + G PD A+N +++ L++ G A + E M +G SP R
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 17/366 (4%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G HN TY+ +++ R Q +++L +M + G ++ T +N + +K +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
VA+ + M ++ T N L+ L EA L D++ + P+L TY V++ G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C+ + A + N+M +P V+ +N +++GL K DA+ LF+ M+ KG PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
V +Y+ +I C N R LL +M ER PD T++ALI
Sbjct: 291 VVTYSSLISCLC---------------NYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
+ EA ++Y EMV+ P+I TY+ ++ + + +++++ M+ + C PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQ 597
+Y LI G R E + EM ++G+ + YN L +AG + E+ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 598 KMRFSG 603
+M G
Sbjct: 456 EMVSDG 461
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 171/351 (48%), Gaps = 17/351 (4%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G+ N+ T+N+++ L + +++++ M KG + T+ + +N + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ M + K + GV N +++ L + K +A LF +++ + PN+ TY+ L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A R+ ++MI++ PDV + +++ +K GK +A KL++ M + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
+ +Y+ +I FC + R+D + + M + C PD +TYN LIK
Sbjct: 361 IVTYSSLINGFCMHD---------------RLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
K +E + +++EM + G TYN++++ FQ G+ +M ++++ EM+ G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
+Y L+ GL + +A E + M+ + YN + +AG+
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 32/385 (8%)
Query: 189 DELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTY 248
D F+L ME E G+ L +N ++D L +++H A F K G N TY
Sbjct: 238 DLAFNLLNKMEQGKLEPGV-LIYNTIIDGLCKYKHMD-DALNLFKEMETK-GIRPNVVTY 294
Query: 249 NSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNK 307
+S++S L ++ +L +M E+ + + TF ++AF + +A +++ M K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 308 YKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL--KHRFTPNLTTYTVLLGGWCRVKNLM 365
+ T + L+ EA+ +F+ + KH F P++ TY L+ G+C+ K +
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVE 413
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
E V+ EM +G + V +NI+++GL + G A ++F+ M + G PN+ +Y ++
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 426 WKFCK----QNAAV----------------YTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
CK + A V Y +I G +++ +DL + +G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
PD + YN +I + +EA ++KEM G P YN ++++ + G+ E ++
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLIS 550
EM R C ++ T+ GL++
Sbjct: 594 IKEM--RSCGFAGDASTI---GLVT 613
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 15/222 (6%)
Query: 364 LMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTI 423
L +A ++ EM+ P ++ + +L + K+ K I L E M+ G N +Y+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 424 MIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKM 483
+I FC+ R ++ + +L +M + G P+ +T ++L+ K
Sbjct: 122 LINCFCR---------------RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 484 PDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTV 543
EAV + +M +G++P T+N ++ F + D M+ +GC PD +Y V
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 544 LIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
++ GL + + A+ L +M + ++ VL YN L +
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 398 KRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
K DA+ LF M P P++ ++ ++ K N + D+V L +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMN---------------KFDVVISLGE 105
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+M+ G P + TY+ LI + A+ + +M++ G++P I T + ++ Y +
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+ D+M G P+ ++ LI GL +++ EA ++ M+ KG + ++ Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSGKFE 606
L + G + + L KM GK E
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKME-QGKLE 253
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 17/368 (4%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERK 296
K GF + T S+++ + +F+ VS+++ M G + ++ + +N ++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRS-KLPKEAQLLFDKLKHRFTPNLTTYTVLL 355
A+ +F M K +A T N L+ L S + A+LL D +K + PN+ +T L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
+ + NL+EA ++ EMI + P+V +N ++ G G DA +F++M +KG
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 416 PNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALI 475
P+V +Y +I FCK +R++ L EM +G D TYN LI
Sbjct: 322 PDVVTYNTLITGFCKS---------------KRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 476 KLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCC 535
+ A +++ MV G P I TYN+++ G E + +++ +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 536 PDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDEL 595
D +Y ++I GL D+ EA+ + KG+K + Y + L R G D+L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 596 AQKMRFSG 603
++M+ G
Sbjct: 487 CRRMKEDG 494
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 34/369 (9%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMN 306
+ +++++ + +F+ ++ + +M G+ + +F I ++ F A+A+ M
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLK-HRFTPNLTTYTVLLGGWCRVKNLM 365
K F+ + T+ LL + +EA L D + F PN+ Y ++ G C+ ++L
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
A V+ M KG + D V +N ++ GL G+ +DA +L M + PNV +T +I
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 426 WKFCKQ--------------------NAAVYTCLITGF------GNRRRMDIVYDLLKEM 459
F K+ N Y LI GF G+ + M +DL M
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM---FDL---M 315
Query: 460 EERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNY 519
+GC PD +TYN LI K ++ ++++ EM G TYN ++ Y Q G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 520 EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKF 579
+ +KV++ M+ G PD +Y +L+ L + + +A +E++ + M ++ YN
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 580 AADLSRAGR 588
L R +
Sbjct: 436 IQGLCRTDK 444
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 15/260 (5%)
Query: 340 LKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKR 399
+K F P++ T LL G+C+ EA + + M GF P+VV +N ++ GL K
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 400 SDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEM 459
++A+++F M+ KG + +A Y LI+G N R LL++M
Sbjct: 201 NNALEVFYCMEKKGI---------------RADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 460 EERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNY 519
+R P+ + + ALI + EA +YKEM+R P + TYN ++ + G
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 520 EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKF 579
+ ++D M+ +GC PD +Y LI G R + K EM +G+ YN
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 580 AADLSRAGRSYVLDELAQKM 599
+AG+ V ++ +M
Sbjct: 366 IHGYCQAGKLNVAQKVFNRM 385
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 148/333 (44%), Gaps = 24/333 (7%)
Query: 211 HNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEE 270
+N V++ L + R F+C +K G ++ TYN+++S L + ++ +L +
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCM--EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 271 MGEKGLLSMETFKIAM-NAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKL 329
M ++ + F A+ + F +A +++ M + V T N L+
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 330 PKEAQLLFDKLKHRFT-PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNI 388
+A+ +FD + + P++ TY L+ G+C+ K + + +++ EM +G D +N
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 389 MLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ----------------- 431
++ G + GK + A K+F M G SP++ +Y I++ C
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 432 ---NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAV 488
+ Y +I G ++ + L + + +G PD + Y +I + + + EA
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 489 RIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEM 521
++ + M GF P+ Y+ ++ ++ + + E+
Sbjct: 485 KLCRRMKEDGFMPSERIYDETLRDHYTSLSAEL 517
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 125/319 (39%), Gaps = 59/319 (18%)
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+A ++ EM+ P +V +L + K+ K I L+ M+ G S ++ S+TI+I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 426 WKFC--------------------KQNAAVYTCLITGF--GNR----------------- 446
FC + + L+ GF GNR
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 447 ----------------RRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRI 490
R ++ ++ ME++G D +TYN LI + +A R+
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 491 YKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLIS 550
++MV+ P + + ++ ++ + GN R ++ EMIRR P+ +Y LI G
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 551 QDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG----KFE 606
G+A + M+ KG V+ YN ++ R +L +M + G F
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 607 VSNVLARWAETTKNRVYRK 625
+ ++ + + K V +K
Sbjct: 362 YNTLIHGYCQAGKLNVAQK 380
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 398 KRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
K DA LF M P P++ +T ++ K N + DIV L
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMN---------------KFDIVIYLYH 103
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+ME G D ++ LI A+ + +M++ GF+P+I T ++ + Q
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
++ + D M G P+ Y +I GL A + M +KG++A + YN
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 578 KFAADLSRAGR 588
+ LS +GR
Sbjct: 224 TLISGLSNSGR 234
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 181/386 (46%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G+ +S T+N+++ L R + V++++ M KG + T+ I +N + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+++ + M + K + GV N +++ L K +A LF ++ ++ PN+ TY L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A R+ ++MI++ P+VV + +++ +K GK +A KL++ M + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 418 VRSYT--------------------IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y+ +MI K C N Y LI GF +R+D +L +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +RG + +TY LI + D A ++K+MV G P I TY++++ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
E V++ + R PD +Y ++I G+ + + + + KG+K V+ Y
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
+ R G D L ++M+ G
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEG 566
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 175/406 (43%), Gaps = 57/406 (14%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G +HN TY+ +++ R Q +++L +M + G + T +N F A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
V++ M + ++ T N L+ L R EA L D++ + P+L TY +++ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 358 WCR-----------------------------------VKNLMEAGRVWNEMIDKGFKPD 382
C+ KN+ +A ++ EM +KG +P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 383 VVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAV------- 435
VV +N ++ L G+ SDA +L M + +PNV +++ +I F K+ V
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 436 -------------YTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQK 482
Y+ LI GF R+D + + M + C P+ +TYN LIK K
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 483 MPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYT 542
DE + +++EM + G TY ++ +FQ + + V+ +M+ G PD +Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 543 VLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
+L+ GL + + A E + M+ + YN + +AG+
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 161/362 (44%), Gaps = 55/362 (15%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMN 306
++ ++S + + +F+ ++S+ E+M G+ ++ T+ I +N F + A+A+ M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM- 142
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLME 366
+K + P++ T LL G+C + +
Sbjct: 143 ---------------------------------MKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 367 AGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIW 426
A + +M++ G++PD N ++ GL + + S+A+ L + M KG P++ +Y I++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 427 KFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPP 466
CK+ +Y +I N + ++ +L EM+ +G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 467 DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
+ +TYN+LI+ + +A R+ +M+ P + T++ ++ ++ + G K++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA 586
DEMI+R PD +Y+ LI G DR EA E M+ K V+ YN +A
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 587 GR 588
R
Sbjct: 410 KR 411
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 176/379 (46%), Gaps = 28/379 (7%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLL--SMETFKIAMNAFAAAKERKKAVAIFEL 304
TY +++ L + + +S+L++M E+G + + + ++A K A+ +F
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 305 MNKYKFKAGVDTINCLLE---NLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRV 361
M+ + V T N L+ N GR ++LL D ++ + PN+ T++ L+ + +
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGR--WSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
L+EA ++++EMI + PD+ ++ ++ G + +A +FE+M +K PNV +Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 422 TIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEE 461
+I FCK N YT LI GF R D + K+M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 462 RGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEM 521
G PD +TY+ L+ + + A+ +++ + RS +P I+TYN++++ + G E
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 522 GRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAA 581
G ++ + +G P+ +YT ++ G + EA EM E+G YN
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 582 DLSRAGRSYVLDELAQKMR 600
R G EL ++MR
Sbjct: 580 AHLRDGDKAASAELIREMR 598
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 364 LMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTI 423
L +A ++ +M+ P +V + +L + K+ K I L E M+ G S N+ +Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 424 MIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERG 463
+I FC++ + L+ GF + R+ L+ +M E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 464 CPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGR 523
PD T+N LI + EAV + MV G +P + TY +++ + G+ ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 524 KVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADL 583
+ +M + P Y +I L + +A EM KG++ V+ YN L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 584 SRAGR 588
GR
Sbjct: 302 CNYGR 306
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G N+ TY +++ +AR+ + + ++M G+L + T+ I ++ + + A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ +FE + + K + + T N ++E + ++ ++ LF L + PN+ TYT ++ G
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKA 411
+CR EA ++ EM ++G PD +N ++ L+ G ++ + +L M++
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 193/396 (48%), Gaps = 25/396 (6%)
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEM-GEKGLLSMET-FKIAMNAFAAAKERKKA 298
F ++ Y+ +++ LG ++ F+ + +L + + ++ E F +N F K +A
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGW 358
+ +F+ M +Y+ + V ++N LL L + ++ + + P+ TY +L+ G
Sbjct: 103 LHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGC 162
Query: 359 CRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKL-FEVMKAKGPSPN 417
+ +A ++++EM+ K KP V ++ GL K + +A+K+ +++K G P
Sbjct: 163 SQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPT 222
Query: 418 VRSYTIMIWKFC--------------------KQNAAVYTCLITGFGNRRRMDIVYDLLK 457
V Y +I C K +AA+Y+ LI+ R + V +L+
Sbjct: 223 VHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILE 282
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM E+GC PD +TYN LI ++ + A R+ EMV G KP + +YNMI+ +F+
Sbjct: 283 EMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIK 342
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+E ++++M RRGC PD SY ++ GL + EA L+EML KG K
Sbjct: 343 KWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLE 402
Query: 578 KFAADLSRAGRSYVLDELAQKMR--FSGKFEVSNVL 611
F L +G+ +L ++ + +G +V +V+
Sbjct: 403 GFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVM 438
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 172/390 (44%), Gaps = 25/390 (6%)
Query: 224 ARRPAFRFFCWAGDKP---GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSM 279
A+ F G+K G +HN TYN +++ R Q +++L +M + G S+
Sbjct: 21 AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 80
Query: 280 ETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK 339
T +N + K AVA+ + M + ++ T L+ L EA L D+
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 140
Query: 340 LKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGK 398
+ R PNL TY V++ G C+ ++ A + N+M + DVV N +++ L K
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 399 RSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCK--------------------QNAAVYTC 438
DA+ LF+ M+ KG PNV +Y+ +I C N +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 439 LITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSG 498
LI F + L +M +R PD TYN+LI + D+A ++++ MV
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 499 FKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAY 558
P + TYN ++K + ++ E G +++ EM RG D +YT LI GL A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 559 KYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
K ++M+ G+ ++ Y+ L G+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 162/349 (46%), Gaps = 21/349 (6%)
Query: 276 LLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGR-SKLPKEAQ 334
L S+ F ++A A K+ +++ E M + + T N L+ R S++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 335 LLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 394
LL +K + P++ T + LL G+C K + +A + ++M++ G++PD + ++ GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 395 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAA 434
K S+A+ L + M +G PN+ +Y +++ CK+ +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 435 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
++ +I R +D +L KEME +G P+ +TY++LI + +A ++ +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
+ P + T+N ++ ++ + G + K+ D+MI+R PD +Y LI G DR
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+A + E M+ K + YN ++ R EL ++M G
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 167/383 (43%), Gaps = 22/383 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEM-GEKGLLSMETFKIAMNAFAAAKERKKA 298
G N TY +++ L + + ++L +M K + F +++ + A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 299 VAIFELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGG 357
+ +F+ M + V T + L+ L + +QLL D ++ + PNL T+ L+
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ + +EA ++ ++MI + PD+ +N ++ G + A ++FE M +K P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 418 VRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y +I FCK + YT LI G + D + K
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+M G PPD +TY+ L+ + ++A+ ++ M +S K I+ Y +++ + G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+ G ++ + +G P+ +Y +I GL S+ EAY L++M E G YN
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 578 KFAADLSRAGRSYVLDELAQKMR 600
R G EL ++MR
Sbjct: 505 TLIRAHLRDGDKAASAELIREMR 527
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 125/317 (39%), Gaps = 58/317 (18%)
Query: 340 LKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNI----------- 388
+K R P++ + LL ++K + +M G ++ +NI
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 389 -----MLEGLLKIG-------------------KRSDAIKLFEVMKAKGPSPNVRSYTI- 423
+L ++K+G + SDA+ L + M G P+ ++T
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 424 -------------------MIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGC 464
M+ + C+ N Y ++ G R +D+ ++LL +ME
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 465 PPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRK 524
D + +N +I + + D+A+ ++KEM G +P + TY+ ++ G + +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 525 VWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLS 584
+ +MI + P+ ++ LI + + + EA K ++M+++ + + YN
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 585 RAGRSYVLDELAQKMRF 601
R LD+ Q F
Sbjct: 302 MHDR---LDKAKQMFEF 315
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G ++ TY +++ L + + ++M G+ + T+ I ++ + +KA
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ +F+ M K + K + ++E + ++ + LF L + PN+ TY ++ G
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKA 411
C + L EA + +M + G PD +N ++ L+ G ++ + +L M++
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 173/386 (44%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
GF + +TY+S+M LG+ R ++++ +L+EM GL ++ TF I + A + +A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGG 357
I + M+ V T L++ L ++ A+ +F+K+K R P+ TY LL
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ ++L + W+EM G PDVV I+++ L K G +A +VM+ +G PN
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 418 VRSYTIMIWKF--------------------CKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y +I K A Y I +G + +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+M+ +G P+ + NA + + EA +I+ + G P TYNM+MK Y + G
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+ K+ EM+ GC PD LI L DR EA+K M E +K V+ YN
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
A L + G+ EL + M G
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELM 305
TYN ++ L A E + ++ G + + T+ ++A+ + + + +++ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 306 NKYKFKAGVDTINCLLENLGRSKLPKEA-QLLFDKLKHR-FTPNLTTYTVLLGGWCRVKN 363
+ ++ +A T N ++ L ++ +A L +D + R F+P TY L+ G +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 364 LMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTI 423
L EA +++ M+D G +P+ +NI++ G K G+ A LF+ M +G P++++Y++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 424 MIWKFC--------------------KQNAAVYTCLITGFGNRRRMDIVYDLLKEME-ER 462
++ C + Y +I G G R++ L EM+ R
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 463 GCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMG 522
G PD TYN+LI + I M +EA +IY E+ R+G +P + T+N +++ Y +G E
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 523 RKVWDEMIRRGCCPDDNSYTVL 544
V+ M+ G P+ +Y L
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQL 1108
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 23/296 (7%)
Query: 316 TINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEM 374
T N L+ L + + + AQ +F ++K P++ TY LL + + + E ++ EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 375 IDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF-EVMKAKGPSPNVRSYTIMIWKF----- 428
+ + + HNI++ GL+K G DA+ L+ ++M + SP +Y +I
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 429 ---------------CKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNA 473
C+ N A+Y LI GFG D L K M + G PD TY+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 474 LIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEM-IRR 532
L+ + + DE + +KE+ SG P + YN+I+ ++ E +++EM R
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 533 GCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
G PD +Y LI L EA K E+ G++ V +N S +G+
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 22/315 (6%)
Query: 278 SMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLF 337
+ ET + A + ++ +F+LM K K +T + ++L K+A
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 338 DKLKH-RFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKI 396
K++ F N +Y L+ + + EA V+ MI +GF+P + ++ ++ GL
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL--- 233
Query: 397 GKRSD---AIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVY 453
GKR D + L + M+ G PNV ++TI I G +++ Y
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL---------------GRAGKINEAY 278
Query: 454 DLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSY 513
++LK M++ GC PD +TY LI + + D A ++++M KP TY ++ +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 514 FQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPV 573
+ + ++ W EM + G PD ++T+L+ L GEA+ L+ M ++G+ +
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 574 LDYNKFAADLSRAGR 588
YN L R R
Sbjct: 399 HTYNTLICGLLRVHR 413
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 163/378 (43%), Gaps = 17/378 (4%)
Query: 228 AFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAM 286
+F +F H + T N M+ L + E M + + M ++ + T+
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 287 NAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLK-HRFT 345
+ + K+A M ++ F + N L+ L +S+ EA ++ ++ F
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 346 PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKL 405
P+L TY+ L+ G + +++ + EM G KP+V I + L + GK ++A ++
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 406 FEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
+ M +G P+V +YT++I C R++D ++ ++M+
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALC---------------TARKLDCAKEVFEKMKTGRHK 325
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
PD +TY L+ + D + + EM + G P + T+ +++ + + GN+
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
D M +G P+ ++Y LI GL+ R +A + M G+K Y F +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 586 AGRSYVLDELAQKMRFSG 603
+G S E +KM+ G
Sbjct: 446 SGDSVSALETFEKMKTKG 463
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 178/398 (44%), Gaps = 33/398 (8%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
GF N+ +YN ++ +L ++R + + M +G S++T+ M ++
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ + + M K V T + LGR+ EA + ++ P++ TYTVL+
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF-EVMKAKGPSP 416
C + L A V+ +M KPD V + +L+ + D++K F M+ G P
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD-NRDLDSVKQFWSEMEKDGHVP 361
Query: 417 NVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALI- 475
+V ++TI++ CK FG +D L M ++G P+ TYN LI
Sbjct: 362 DVVTFTILVDALCKAG---------NFGE------AFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 476 KLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCC 535
L+++ ++ D+A+ ++ M G KPT +TY + + Y ++G+ + +++M +G
Sbjct: 407 GLLRVHRL-DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 536 PDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDE- 594
P+ + + L R EA + + + G+ + YN S+ G +DE
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE---IDEA 522
Query: 595 ---LAQKMRFSGKFEVSNVLARWAETTKNRVYRKDRIE 629
L++ M + +V V + N +Y+ DR++
Sbjct: 523 IKLLSEMMENGCEPDVIVV-----NSLINTLYKADRVD 555
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 158/375 (42%), Gaps = 30/375 (8%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G +S TYN MM + + + + +L EM E G + +N A +A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+F M + K K V T N LL LG++ +EA LF+ + + PN T+ L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C+ + A ++ +M+D G PDV +N ++ GL+K G+ +A+ F MK K P+
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPD 676
Query: 418 VRSYTIMIWKFCKQNAA----------VYTC-----------LITGFGNRRRMDIVYDLL 456
+ ++ K + +Y C LI +D
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 457 KEMEERGCPPDGLTYNALIKLMKIQKMPDE---AVRIYKEMVRS-GFKPTIHTYNMIMKS 512
+ + G DG + L+ +++ + A ++++ + G +P + TYN+++
Sbjct: 737 ERLVANGICRDGDS--ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 513 YFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAP 572
+ E+ + V+ ++ GC PD +Y L+ + E ++ +EM +A
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 573 VLDYNKFAADLSRAG 587
+ +N + L +AG
Sbjct: 855 TITHNIVISGLVKAG 869
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 153/382 (40%), Gaps = 25/382 (6%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELM 305
TYN++++ LG+ + + + + E M +KG + TF + E A+ + M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 306 NKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLM 365
V T N ++ L ++ KEA F ++K P+ T LL G + +
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 366 EAGRVW-NEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIM 424
+A ++ N + + +P + ++ +L +A+ E + A G + S +
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 425 IWKF-CKQNAA---------------------VYTCLITGFGNRRRMDIVYDLLKEMEER 462
I ++ CK N Y LI G ++I D+ +++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 463 GCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMG 522
GC PD TYN L+ DE +YKEM + T+N+++ + GN +
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 523 RKVW-DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAA 581
++ D M R P +Y LI GL R EA + E ML+ G + YN
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 582 DLSRAGRSYVLDELAQKMRFSG 603
+AG + L ++M G
Sbjct: 935 GFGKAGEADAACALFKRMVKEG 956
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 24/346 (6%)
Query: 276 LLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGR-SKLPKEAQ 334
L S+ F ++A A K+ +++ E M + + T N L+ R S++
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 335 LLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 394
LL +K + P++ T + LL G+C K + +A + ++M++ G++PD + ++ GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 395 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAA 434
K S+A+ L + M +G PN+ +Y +++ CK+ N
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 435 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
+Y+ +I R D +L EME +G P+ +TY++LI + + +A R+ +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
+ P + T+N ++ ++ + G K++DEMI+R PD +Y+ LI G DR
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMR 600
EA E M+ K V+ YN +A R +DE + R
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR---IDEGVELFR 424
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 182/386 (47%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G+ ++ T+ +++ L + V++++ M ++G ++ T+ + +N + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ M K +A V + ++++L + + +A LF +++++ PN+ TY+ L+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C + +A R+ ++MI++ P+VV N +++ +K GK +A KL++ M + P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 418 VRSYT--------------------IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y+ +MI K C N Y LI GF +R+D +L +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +RG + +TY LI + D A ++K+MV G P I TYN ++ + G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
E V++ + R P +Y ++I G+ + + + + KG+K V+ YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
+ R G D L +KMR G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 174/397 (43%), Gaps = 25/397 (6%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G +HN TYN +++ R Q +++L +M + G S+ T +N + K A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
VA+ + M + ++ T L+ L EA L D++ R PNL TY V++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C+ ++ A + N+M + +VV ++ +++ L K DA+ LF M+ KG PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 418 VRSYTIMIWKFC--------------------KQNAAVYTCLITGFGNRRRMDIVYDLLK 457
V +Y+ +I C N + LI F ++ L
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +R PD TY++LI + DEA +++ M+ P + TYN ++ + +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+ G +++ EM +RG + +YT LI G A ++M+ G+ ++ YN
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 578 KFAADLSRAG---RSYVLDELAQKMRFSGKFEVSNVL 611
L + G ++ V+ E Q+ + N++
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 157/355 (44%), Gaps = 20/355 (5%)
Query: 188 IDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRT 247
ID F+L MEA E + + ++ V+D L ++RH A F +K G N T
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVI-YSTVIDSLCKYRH-EDDALNLFTEMENK-GVRPNVIT 297
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMN 306
Y+S++S L ++ +L +M E+ + ++ TF ++AF + +A +++ M
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLM 365
K + T + L+ EA+ +F+ + + PN+ TY L+ G+C+ K +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
E ++ EM +G + V + ++ G + +A +F+ M + G PN+ +Y ++
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
CK ++ + R +M+ P TYN +I+ M +
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKME---------------PTIYTYNIMIEGMCKAGKVE 522
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNS 540
+ ++ + G KP + YN ++ + + G E ++ +M G PD +
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 21/328 (6%)
Query: 281 TFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL 340
+F + + A + +A+ +F M + K T L++ L + + EA LL D++
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 341 KHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKR 399
+ +P+ Y VL+ G C+ +L ++ + M KG P+ V +N ++ GL GK
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 400 SDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAAVYTCL 439
A+ L E M + PN +Y +I KQ N +Y+ L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 440 ITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGF 499
I+G + + L ++M E+GC P+ + Y+ L+ + + P+EA I M+ SG
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 500 KPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYK 559
P +TY+ +MK +F+TG E +VW EM + GC + Y+VLI GL R EA
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 560 YLEEMLEKGMKAPVLDYNKFAADLSRAG 587
+ML G+K + Y+ L G
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 191/438 (43%), Gaps = 38/438 (8%)
Query: 209 LSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSML 268
LS NLV+ L + R R A F ++ + TY ++M L + + + V +L
Sbjct: 188 LSFNLVIKALCKLRFVDR-AIEVFRGMPERKCLP-DGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 269 EEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLG-R 326
+EM +G S + + ++ + + + + M T N L+ L +
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 327 SKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAH 386
KL K LL + + PN TY L+ G + + +A R+ + M ++G+ + +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 387 NIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------- 431
++++ GL K GK +A+ L+ M KG PN+ Y++++ C++
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 432 -----NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDE 486
NA Y+ L+ GF + + KEM++ GC + Y+ LI + E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 487 AVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMI---RRGCCPDDNSYTV 543
A+ ++ +M+ G KP Y+ I+K G+ + K++ EM+ PD +Y +
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 544 LIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR------AGRSYVLDELA- 596
L+ GL Q A L ML++G V+ N F LS GRS+ L+EL
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF-LEELVV 604
Query: 597 ---QKMRFSGKFEVSNVL 611
++ R SG + V+
Sbjct: 605 RLLKRQRVSGACTIVEVM 622
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 170/370 (45%), Gaps = 22/370 (5%)
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKAV 299
F T +SM+ + F+++ +L + + + +E +F + A+ A KAV
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 300 AIFE-LMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFD-----KLKHRFTPNLTTYTV 353
+F ++++++ K V + N +L + L +D + +PN ++ +
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 354 LLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKG 413
++ C+++ + A V+ M ++ PD + +++GL K + +A+ L + M+++G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 414 PSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNA 473
SP+ Y ++I CK+ G+ R V L+ M +GC P+ +TYN
Sbjct: 253 CSPSPVIYNVLIDGLCKK------------GDLTR---VTKLVDNMFLKGCVPNEVTYNT 297
Query: 474 LIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRG 533
LI + ++ D+AV + + MV S P TY ++ + ++ M RG
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 534 CCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLD 593
+ + Y+VLI GL + ++ EA +M EKG K ++ Y+ L R G+
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 594 ELAQKMRFSG 603
E+ +M SG
Sbjct: 418 EILNRMIASG 427
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKA 298
G N+ TY+S+M + E V + +EM + G + + + ++ K+A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 299 VAIFELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKL---KHRFTPNLTTYTVL 354
+ ++ M K + +++ L G + +L + L + + P++ TY +L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEG---------------------L 393
L G C K++ A + N M+D+G PDV+ N L L
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRL 606
Query: 394 LKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ---NAAVYTC 438
LK + S A + EVM K +P ++ +++ + CK NAA+ C
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKC 654
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 166/349 (47%), Gaps = 21/349 (6%)
Query: 276 LLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGR-SKLPKEAQ 334
L S+ F ++A A K+ +++ E M + + G+ T N L+ R S++
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 335 LLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 394
LL +K + P++ T + LL G+C K + +A + ++M++ G++PD + ++ GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 395 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAA 434
K S+A+ L + M +G PN+ +Y +++ CK+ +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 435 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
++ +I R +D +L KEME +G P+ +TY++LI + +A ++ +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 495 VRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRS 554
+ P + T+N ++ ++ + G + K++D+MI+R PD +Y L+ G DR
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 555 GEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
+A + E M+ K V+ YN ++ R EL ++M G
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 175/405 (43%), Gaps = 57/405 (14%)
Query: 241 FAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAV 299
H TYN +++ R Q +++L +M + G S+ T +N + K AV
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 300 AIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGW 358
A+ + M + ++ T L+ L EA L D++ R PNL TY V++ G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 359 CR---------VKNLMEAGRV------WNEMID--------------------KGFKPDV 383
C+ + N MEA ++ +N +ID KG +P+V
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 384 VAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAV-------- 435
V ++ ++ L G+ SDA +L M K +PN+ ++ +I F K+ V
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 436 ------------YTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKM 483
Y L+ GF R+D + + M + C PD +TYN LIK K
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 484 PDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTV 543
++ +++EM G TY +++ F G+ + +KV+ +M+ G PD +Y++
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 544 LIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
L+ GL + + +A + + M + +K + Y + +AG+
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 169/383 (44%), Gaps = 22/383 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEM-GEKGLLSMETFKIAMNAFAAAKERKKA 298
G N TY +++ L + + +++L +M K + F +++ + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 299 VAIFELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGG 357
+ +F+ M + V T + L+ L + +QLL D ++ + PNL T+ L+
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
+ + +EA +++++MI + PD+ +N ++ G + A ++FE M +K P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 418 VRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLK 457
V +Y +I FCK + YT LI G + D + K
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
+M G PPD +TY+ L+ + ++A+ ++ M +S K I+ Y +++ + G
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
+ G ++ + +G P+ +Y +I GL S+ EAY L++M E G YN
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 578 KFAADLSRAGRSYVLDELAQKMR 600
R G EL ++MR
Sbjct: 580 TLIRAHLRDGDKAASAELIREMR 602
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G ++ TY +++ L + + ++M G+ + T+ I ++ + +KA
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+ +F+ M K + K + ++E + ++ + LF L + PN+ TY ++ G
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKA 411
C + L EA + +M + G P+ +N ++ L+ G ++ + +L M++
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 172/363 (47%), Gaps = 28/363 (7%)
Query: 217 VLERFRHARRPA--FRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEK 274
VL+ R + PA RFF W +K GF+H +++ M+ LGRAR + L + +
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERR 129
Query: 275 --GLLSMET--FKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLP 330
G + ++ F + ++ A +++V +F+ M + V T N LL L +
Sbjct: 130 SNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT 189
Query: 331 KEAQLLFDKLKHRF--TPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNI 388
A LFD+++ + TP+ T+ L+ G+C+ + EA R++ +M PDVV +N
Sbjct: 190 GMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNT 249
Query: 389 MLEGLLKIGKRSDAIKLFEVM--KAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNR 446
+++GL + GK A + M KA PNV SYT ++ +C +
Sbjct: 250 IIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCM---------------K 294
Query: 447 RRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEA--VRIYKEMVRSGFKPTIH 504
+ +D + +M RG P+ +TYN LIK + DE + I + F P
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 505 TYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEM 564
T+N+++K++ G+ + KV+ EM+ PD SY+VLI L ++ A E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 565 LEK 567
EK
Sbjct: 415 FEK 417
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 191/434 (44%), Gaps = 46/434 (10%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME--TFKIAMNAFAAAKERKK 297
G + + T+NS++SIL + + + +EM ++ + TF +N F +
Sbjct: 168 GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 298 AVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFT---PNLTTYTVL 354
A IF+ M Y V T N +++ L R+ K A + + + T PN+ +YT L
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
+ G+C + + EA V+++M+ +G KP+ V +N +++GL + R D IK +++
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE-AHRYDEIK--DILIGGND 344
Query: 415 -----SPNVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRM 449
+P+ ++ I+I C ++A Y+ LI R
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 450 DIVYDLLKEMEER-------GCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPT 502
D L E+ E+ C P YN + + + +A ++++++++ G +
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP 464
Query: 503 IHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLE 562
+Y ++ + + G ++ ++ M+RR PD +Y +LI GL+ + A+ L+
Sbjct: 465 -PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQ 523
Query: 563 EMLEKGMKAPVLDYNKFAADLSR---AGRSYVLDELAQKMRFSGKFEVSNVLAR--WAET 617
ML ++ A+L++ A S+ L L + R ++S + R ++
Sbjct: 524 RMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSA 583
Query: 618 TKNRVYRKDRIETD 631
K + + R+ D
Sbjct: 584 QKEKAFLIVRLLYD 597
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 384 VAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGF 443
++ +L+ L I +D ++ F+ + KG S +S+ +M+
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLML---------------EFL 110
Query: 444 GNRRRMDIVYDLLKEMEER--GCPP-DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFK 500
G R +++ + L +E R GC +N+LI+ + E+V++++ M + G
Sbjct: 111 GRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 501 PTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRR-GCCPDDNSYTVLIGGLISQDRSGEAYK 559
P++ T+N ++ + G M ++DEM R G PD ++ LI G EA++
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 560 YLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
++M V+ YN L RAG+
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 465 PPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRK 524
P ++ +++ +++ K+P + +R + + GF ++ ++++ + N + R
Sbjct: 62 PSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARN 121
Query: 525 VWDEMIRR--GCCP-DDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAA 581
+ RR GC D + LI + E+ K + M + G+ VL +N +
Sbjct: 122 FLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLS 181
Query: 582 DLSRAGRSYVLDELAQKMR 600
L + GR+ + +L +MR
Sbjct: 182 ILLKRGRTGMAHDLFDEMR 200
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 116/303 (38%), Gaps = 27/303 (8%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL----SMETFKIAMNA----FAAAKER 295
+S +Y+ ++ L +F+ ++ E+ EK +L + A N A +
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKT 446
Query: 296 KKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLL 355
K+A +F + K + + + K +LL L+ F P+L TY +L+
Sbjct: 447 KQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
G ++ + A M+ + P + +L L K +++ L +M K
Sbjct: 507 DGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIR 566
Query: 416 PNVRSYT----IMIWKFCKQNAAVYTCLITGFG--------------NRRRMDIVYDLLK 457
N+ T ++ K+ A + L+ G NR+ +D + L+
Sbjct: 567 QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLD-AHTLVL 625
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
E+ D T N +I+ + K EA +Y E+V G + + ++ + G
Sbjct: 626 FCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAG 685
Query: 518 NYE 520
+E
Sbjct: 686 KWE 688
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 170/359 (47%), Gaps = 17/359 (4%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELM 305
T+N+++ L +A E ++L+EM + G + TF I + +++ ++ + A+ ++E
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 306 NKYKFKAGVDTINCLLENLGR-SKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNL 364
K T + LL L + K+ K ++L ++ PN Y ++ G+CR +L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 365 MEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIM 424
+ A M +G KPD +A+N ++ ++G+ +A K MK KG SP+V +Y I
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI- 464
Query: 425 IWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMP 484
LI G+G + D +D+LKEME+ G P+ ++Y LI +
Sbjct: 465 --------------LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVL 544
EA + ++M G P + YNM++ G E + EM+++G + +Y L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 545 IGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
I GL + EA L E+ KG+K V YN + AG L ++M+ SG
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 19/280 (6%)
Query: 336 LFDKLKH-RFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 394
LF+++KH R P++ Y VL+ G C+ K + +A ++++EM+ + P ++ +N +++G
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 395 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYD 454
K G + K+ E MKA P++ + L+ G ++ +
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSL---------------ITFNTLLKGLFKAGMVEDAEN 305
Query: 455 LLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYF 514
+LKEM++ G PD T++ L + + A+ +Y+ V SG K +T ++++ +
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 515 QTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVL 574
+ G E ++ + +G P++ Y +I G + A +E M ++GMK L
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 575 DYNKFAADLSRAGRSYVLDELAQKMRFSG---KFEVSNVL 611
YN G ++ KM+ G E N+L
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 21/352 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G + + TYN ++ GR +F+ +L+EM + G + ++ ++ +N + +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 299 VAIFELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGG 357
+ M V N L++ + K+ + + LK NL TY L+ G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
L EA + E+ KG KPDV +N ++ G G I L+E MK G P
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
+++Y ++I C + T + G E PD L YN ++
Sbjct: 634 LKTYHLLI-SLCTKEGIELTERLFG------------------EMSLKPDLLVYNGVLHC 674
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
+ ++A + K+M+ TYN ++ + G R + DEM R P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRS 589
++Y +++ G AY + EM EKG V N+ + L RS
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 24/270 (8%)
Query: 228 AFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAM 286
AFRF K G N TYN+++ L + +L E+ KGL + T+ +
Sbjct: 548 AFRF-SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 287 NAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL--KHRF 344
+ + A ++ +A++E M + K + T + L+ S KE L ++L +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-----SLCTKEGIELTERLFGEMSL 661
Query: 345 TPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIK 404
P+L Y +L + ++ +A + +MI+K D +N ++ G LK+GK +
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 405 LFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGC 464
L + M A+ P +Y I++ C+ + Y +EM+E+G
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA---------------YVWYREMQEKGF 766
Query: 465 PPDGLTYNALIKLMKIQKMPDEAVRIYKEM 494
D N L+ +K + EA + EM
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 18/384 (4%)
Query: 228 AFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGE-KGLLSMETFKIAM 286
A++FF + G + TY SM+ +L +A + + V M E + + + + + +
Sbjct: 257 AWKFF-HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 287 NAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTP 346
+ +A + +A ++ E V NC+L L + EA +F+++K P
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 347 NLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF 406
NL+TY +L+ CR L A + + M G P+V NIM++ L K K +A +F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 407 EVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPP 466
E M +K C + + LI G G R+D Y + ++M + C
Sbjct: 436 EEMD---------------YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 467 DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
+ + Y +LIK ++ +IYK+M+ P + N M F+ G E GR ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA 586
+E+ R PD SY++LI GLI + E Y+ M E+G YN +
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 587 GRSYVLDELAQKMRFSGKFEVSNV 610
G+ +L ++M+ G FE + V
Sbjct: 601 GKVNKAYQLLEEMKTKG-FEPTVV 623
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 195/469 (41%), Gaps = 39/469 (8%)
Query: 142 RNVSSVTDDNQDSDGECDGNNSESEITSVSYKSTADPREIERVCKVIDELFSLDRNMEAV 201
+N+SS++D+ G N E T + T + +C V+ E + E
Sbjct: 11 KNLSSLSDN---------GENHEKPYTFEGNRQT-----VNDICNVL-ETGPWGPSAENT 55
Query: 202 LDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILGRARQF 261
L V+ VL R + R A +F W + H +YNS++ ++ R R F
Sbjct: 56 LSALSFKPQPEFVIGVLRRLKDVNR-AIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114
Query: 262 ETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCL 320
+ + +L EM G S+ T + A + ++ + ++M K+KF+ L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 321 LENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGF 379
+ LF +++ + P + +T L+ G+ + + A + +EM
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 380 KPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQN------- 432
D+V +N+ ++ K+GK A K F ++A G P+ +YT MI CK N
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 433 -------------AAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMK 479
Y +I G+G+ + D Y LL+ +G P + YN ++ ++
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354
Query: 480 IQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDN 539
DEA+++++EM + P + TYN+++ + G + ++ D M + G P+
Sbjct: 355 KMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 540 SYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
+ +++ L + EA EEM K + + L + GR
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 173/423 (40%), Gaps = 57/423 (13%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERK 296
K G N RT N M+ L ++++ + +M EEM K E TF ++
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 297 KAVAIFELM---------------NKYKFKAG--------------------VDTINCLL 321
A ++E M K F G + +N +
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 322 ENLGRSKLPKEAQLLFDKLK-HRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFK 380
+ + ++ P++ + +F+++K RF P+ +Y++L+ G + E ++ M ++G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 381 PDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCK---------- 430
D A+NI+++G K GK + A +L E MK KG P V +Y +I K
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 431 ----------QNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKI 480
N +Y+ LI GFG R+D Y +L+E+ ++G P+ T+N+L+ +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 481 QKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNS 540
+ +EA+ ++ M P TY +++ + + W EM ++G P S
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 541 YTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMR 600
YT +I GL EA + G YN LS R+ L ++ R
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 601 FSG 603
G
Sbjct: 825 RRG 827
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 244 NSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIF 302
N Y+S++ G+ + + +LEE+ +KGL ++ T+ ++A A+E +A+ F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 303 ELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVK 362
+ M + K C TPN TY +L+ G C+V+
Sbjct: 716 QSMKELK---------C-------------------------TPNQVTYGILINGLCKVR 741
Query: 363 NLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYT 422
+A W EM +G KP +++ M+ GL K G ++A LF+ KA G P
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP------ 795
Query: 423 IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
++A Y +I G N R + L +E RG P
Sbjct: 796 ---------DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 350 TYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVM 409
+Y LL R +N ++ EM GF P V M+ G +K K + + ++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 410 KAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGL 469
+ P +YT +I F N + D++ L ++M+E G P
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHS---------------DMMLTLFQQMQELGYEPTVH 204
Query: 470 TYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEM 529
+ LI+ + D A+ + EM S I YN+ + S+ + G +M K + E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 530 IRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAP-VLDYNKFAADLSRAGR 588
G PD+ +YT +IG L +R EA + E LEK + P YN AG+
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 589 SYVLDELAQKMRFSGKFEVSNVLA 612
L ++ R G + +V+A
Sbjct: 324 FDEAYSLLERQRAKGS--IPSVIA 345
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 184/386 (47%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKA 298
G+ ++ T+ +++ L + V+++++M ++G + T+ +N + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
+++ + M K K +A V N +++ L + K +A LF ++ ++ P++ TY+ L+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A R+ ++MI++ P+VV + +++ +K GK +A KL++ M + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 418 VRSYT--------------------IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y+ +MI K C N Y+ LI GF +R++ +L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +RG + +TY LI + D A ++K+MV G P I TYN+++ + G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
V++ + R PD +Y ++I G+ + + ++ + KG+ V+ YN
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
+ R G D L +KM+ G
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 165/377 (43%), Gaps = 55/377 (14%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMN 306
+N ++S + + +FE ++S+ E+M G+ + T+ I +N F + A+A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM- 144
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLME 366
+K + P++ T + LL G+C K + +
Sbjct: 145 ---------------------------------MKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 367 AGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIW 426
A + ++M++ G+KPD ++ GL K S+A+ L + M +G P++ +Y ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 427 KFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPP 466
CK+ + +Y +I G + MD +L EM+ +G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 467 DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
D TY++LI + +A R+ +M+ P + T++ ++ ++ + G K++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA 586
DEMI+R PD +Y+ LI G DR EA E M+ K V+ Y+ +A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 587 GRSYVLDELAQKMRFSG 603
R EL ++M G
Sbjct: 412 KRVEEGMELFREMSQRG 428
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 183/384 (47%), Gaps = 32/384 (8%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLLSMET--FKIAMNAFAAAKERKKAVAIFEL 304
TY ++++ L + + +S+L++M EKG + + + ++ K A+ +F
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 305 MNKYKFKAGVDT----INCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCR 360
M+ + V T I+CL N GR ++LL D ++ + PN+ T++ L+ + +
Sbjct: 284 MDNKGIRPDVFTYSSLISCLC-NYGR--WSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 361 VKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRS 420
L+EA ++++EMI + PD+ ++ ++ G + +A +FE+M +K PNV +
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 421 YTIMIWKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEME 460
Y+ +I FCK N YT LI GF R D + K+M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 461 ERGCPPDGLTYNALIK-LMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNY 519
G P+ LTYN L+ L K K+ +A+ +++ + RS +P I+TYN++++ + G
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLA-KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 520 EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKF 579
E G +++ + +G P+ +Y +I G + EA L++M E G YN
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 580 AADLSRAGRSYVLDELAQKMRFSG 603
R G EL ++MR G
Sbjct: 580 IRARLRDGDREASAELIKEMRSCG 603
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELM 305
TY+S+++ + + M E M K ++ T+ + F AK ++ + +F M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 306 NKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNL 364
++ T L+ +++ AQ++F ++ PN+ TY +LL G C+ L
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 365 MEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIM 424
+A V+ + +PD+ +NIM+EG+ K GK D +LF + KG SPNV +Y M
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 425 IWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMP 484
I FC++ G++ D LLK+M+E G P+ TYN LI+
Sbjct: 545 ISGFCRK------------GSKEEAD---SLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMI 509
+ + + KEM GF T ++
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLV 614
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 57/384 (14%)
Query: 188 IDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRT 247
ID SL + ME E + + +N ++D L +++H A F D G + T
Sbjct: 239 IDLALSLLKKMEKGKIEADVVI-YNTIIDGLCKYKHMD-DALNLFTEM-DNKGIRPDVFT 295
Query: 248 YNSMMSIL---GR----ARQFETMV------------SMLEEMGEKGLL----------- 277
Y+S++S L GR +R M+ ++++ ++G L
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 278 ------SMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPK 331
+ T+ +N F +A +FELM V T + L++ ++K +
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 332 EAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIML 390
E LF ++ R N TYT L+ G+ + ++ A V+ +M+ G P+++ +NI+L
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 391 EGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMD 450
+GL K GK + A+ +FE ++ P++ +Y IMI CK +++
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG---------------KVE 520
Query: 451 IVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIM 510
++L + +G P+ + YN +I + +EA + K+M G P TYN ++
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 511 KSYFQTGNYEMGRKVWDEMIRRGC 534
++ + G+ E ++ EM R C
Sbjct: 581 RARLRDGDREASAELIKEM--RSC 602
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 20/243 (8%)
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+A ++ +M+ P +V N +L + K+ K I L E M+ G S ++ +Y+I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 426 WKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
FC++ + + L+ G+ + +R+ L+ +M E G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
PD T+ LI + + EAV + +MV+ G +P + TY ++ + G+ ++ +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
+M + D Y +I GL +A EM KG++ V Y+ + L
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 586 AGR 588
GR
Sbjct: 306 YGR 308
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 30/266 (11%)
Query: 346 PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKL 405
P + ++ L G C ++ A + E I+ L I K DA+ L
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDAVDL 70
Query: 406 FEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
F M P P++ + ++ K N + ++V L ++M+ G
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMN---------------KFELVISLGEQMQTLGIS 115
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
D TY+ I + A+ + +M++ G++P I T + ++ Y + +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
D+M+ G PD ++T LI GL +++ EA +++M+++G + ++ Y L +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 586 AGRSYVLDELAQKMRFSGKFEVSNVL 611
G + L +KM GK E V+
Sbjct: 236 RGDIDLALSLLKKME-KGKIEADVVI 260
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 162/343 (47%), Gaps = 17/343 (4%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERKKAVAIFELMN 306
+N ++S + + +FE ++S+ E+M G+ + T+ I +N F + A+A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWCRVKNLM 365
K ++ + T++ LL SK +A L D++ + + P+ T+T L+ G
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
EA + ++M+ +G +PD+V + ++ GL K G A+ L M+A NV + +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
CK R +++ DL EME +G P+ +TYN+LI +
Sbjct: 266 DSLCKY---------------RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI 545
+A R+ M+ P + T+N ++ ++F+ G K+ +EMI+R PD +Y +LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 546 GGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
G +R EA + + M+ K + YN + R
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 57/406 (14%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G +H+ TY+ ++ R Q +++L +M + G + T +N + +K A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
VA+ + M + +K T L+ L EA L D++ R P+L TY ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 358 WCR---------VKNLMEAGRV------WNEMID--------------------KGFKPD 382
C+ + N MEA R+ +N +ID KG +P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 383 VVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAV------- 435
VV +N ++ L G+ SDA +L M K +PNV ++ +I F K+ V
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 436 -------------YTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQK 482
Y LI GF R+D + K M + C P+ TYN LI K
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 483 MPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYT 542
++ V +++EM + G TY I++ +FQ G+ + + V+ +M+ D +Y+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 543 VLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
+L+ GL S + A + + + M+ + YN + +AG+
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 15/253 (5%)
Query: 347 NLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLF 406
+L TY++ + +CR L A V +M+ G++PD+V + +L G + SDA+ L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 407 EVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPP 466
+ M G P+ ++T +I N A L+ +M +RGC P
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEA---------------VALVDQMVQRGCQP 221
Query: 467 DGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVW 526
D +TY ++ + + D A+ + +M + K + +N I+ S + + E+ ++
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 527 DEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRA 586
EM +G P+ +Y LI L + R +A + L MLEK + V+ +N +
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 587 GRSYVLDELAQKM 599
G+ ++L ++M
Sbjct: 342 GKLVEAEKLHEEM 354
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 157/380 (41%), Gaps = 62/380 (16%)
Query: 247 TYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELM 305
TY ++++ L + + +++L +M + ++ F +++ + + AV +F M
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 306 NKYKFKAGVDT----INCLLENLGRSKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRV 361
+ V T INCL N GR ++LL + L+ + PN+ T+ L+ + +
Sbjct: 285 ETKGIRPNVVTYNSLINCLC-NYGR--WSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 362 KNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSY 421
L+EA ++ EMI + PD + +N+++ G + +A ++F+ M +K PN+++Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 422 TIMIWKFCK--------------------QNAAVYTCLITGFGNRRRMDIVYDLLKEMEE 461
+I FCK N YT +I GF D + K+M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 462 RGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRS------------------------ 497
P D +TY+ L+ + D A+ I+K + +S
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 498 --------GFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI-GGL 548
KP + TYN ++ + ++ +M G P+ +Y LI L
Sbjct: 522 AWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 549 ISQDRSGEAYKYLEEMLEKG 568
DR+ A + ++EM G
Sbjct: 582 RDCDRAASA-ELIKEMRSSG 600
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 164/379 (43%), Gaps = 28/379 (7%)
Query: 188 IDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRT 247
ID +L MEA + + + N ++D L ++RH F + G N T
Sbjct: 239 IDLALNLLNKMEAARIKANVVI-FNTIIDSLCKYRHVEVAVDLF--TEMETKGIRPNVVT 295
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMN 306
YNS+++ L ++ +L M EK + ++ TF ++AF + +A + E M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLM 365
+ T N L+ EA+ +F + + PN+ TY L+ G+C+ K +
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+ ++ EM +G + V + +++G + G A +F+ M + ++ +Y+I++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 426 WKFC--------------------KQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
C + N +Y +I G ++ +DL + +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK--- 532
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
PD +TYN +I + +++ EA ++++M G P TYN ++++ + + ++
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 526 WDEMIRRGCCPDDNSYTVL 544
EM G D ++ +++
Sbjct: 593 IKEMRSSGFVGDASTISLV 611
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+A ++ +M+ P +V N +L + K+ K I L E M+ G S ++ +Y+I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
FC+ R ++ + +L +M + G PD +T ++L+ K
Sbjct: 126 NCFCR---------------RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI 545
+AV + +MV G+KP T+ ++ F + D+M++RGC PD +Y ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 546 GGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
GL + A L +M +KA V+ +N L + V +L +M G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%)
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVL 544
D+AV ++ +MV+S P+I +N ++ + + +E+ + ++M G D +Y++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 545 IGGLISQDRSGEAYKYLEEMLEKGMKAPVL 574
I + + A L +M++ G + ++
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIV 154
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 19/375 (5%)
Query: 233 CWAGD--KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAF 289
C+ G K GF + T+ S+++ + E +++ +++ G ++ T+ +
Sbjct: 139 CFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 290 AAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGR-SKLPKEAQLLFDKLKHRFTPNL 348
+ AV +F M + V T N L+ L + A LL D +K R PN+
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 349 TTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEV 408
T+T L+ + +V LMEA ++N MI PDV + ++ GL G +A ++F +
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 409 MKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDG 468
M+ G C N +YT LI GF +R++ + EM ++G +
Sbjct: 319 MERNG---------------CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 469 LTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDE 528
+TY LI+ + PD A ++ +M P I TYN+++ G E +++
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 529 MIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGR 588
M +R + +YT++I G+ + +A+ + KGMK V+ Y + R G
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 589 SYVLDELAQKMRFSG 603
+ D L +KM+ G
Sbjct: 484 IHEADSLFKKMKEDG 498
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 117/275 (42%), Gaps = 22/275 (8%)
Query: 346 PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKL 405
P L T +++ C A +M+ GF+PD+V +L G + DAI L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 406 FEVMKAKGPSPNVRSYTIMIWKFCKQ--------------------NAAVYTCLITGFGN 445
F+ + G PNV +YT +I CK N Y L+TG
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 446 RRRMDIVYDLLKEMEERGCPPDGLTYNALI-KLMKIQKMPDEAVRIYKEMVRSGFKPTIH 504
R LL++M +R P+ +T+ ALI +K+ K+ EA +Y M++ P +
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM-EAKELYNVMIQMSVYPDVF 294
Query: 505 TYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEM 564
TY ++ G + R+++ M R GC P++ YT LI G R + K EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 565 LEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
+KG+ A + Y GR V E+ +M
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 138/293 (47%), Gaps = 26/293 (8%)
Query: 236 GDKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKE 294
G +P N TYN++++ L ++ +L +M ++ + ++ TF ++AF +
Sbjct: 218 GSRP----NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 295 RKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTV 353
+A ++ +M + V T L+ L L EA+ +F + ++ PN YT
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 354 LLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKG 413
L+ G+C+ K + + +++ EM KG + + + ++++G +G+ A ++F M ++
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 414 PSPNVRSYTI---------------MIWKFCKQ-----NAAVYTCLITGFGNRRRMDIVY 453
P++R+Y + MI+++ ++ N YT +I G +++ +
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 454 DLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTY 506
DL + +G P+ +TY +I + + EA ++K+M GF P Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 400 SDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEM 459
+DA+ LF M P P++ +T ++ K N R D+V L ++M
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMN---------------RYDVVISLFEQM 109
Query: 460 EERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNY 519
+ G PP T N ++ + + P A +M++ GF+P + T+ ++ Y
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 520 EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKF 579
E ++D+++ G P+ +YT LI L A + +M G + V+ YN
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 580 AADLSRAGR 588
L GR
Sbjct: 230 VTGLCEIGR 238
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 171/363 (47%), Gaps = 22/363 (6%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLLS-METFKIAMNAFAAAKERKKAVAIFELMN 306
+N ++S + + ++++ ++S+ ++M G+ + + TF I +N F + A++I M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKH-RFTPNLTTYTVLLGGWCRVKNLM 365
K ++ TI L+ R +A L DK+ + P++ Y ++ C+ K +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+A + E+ KG +P+VV + ++ GL + SDA +L M K +PNV +Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 426 WKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
F K + Y+ LI G R+D + M +GC
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
D ++YN LI K ++ +++++EM + G TYN +++ +FQ G+ + ++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
+ +M G PD +Y +L+GGL +A E+M ++ M ++ Y + +
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 586 AGR 588
G+
Sbjct: 448 TGK 450
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 22/386 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G ++ T+N +++ Q +S+L +M + G T +N F A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
V++ + M + +K + N ++++L ++K +A F +++ + PN+ TYT L+ G
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A R+ ++MI K P+V+ ++ +L+ +K GK +A +LFE M P+
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 418 VRSYT--------------------IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
+ +Y+ +M+ K C + Y LI GF +R++ L +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +RG + +TYN LI+ D+A + +M G P I TYN+++ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
E ++++M +R D +YT +I G+ + EA+ + KG+K ++ Y
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
+ L G + ++ L KM+ G
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 162/354 (45%), Gaps = 22/354 (6%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERK 296
K G+ + T S+++ R + VS++++M E G + + +++ K
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENL-GRSKLPKEAQLLFDKLKHRFTPNLTTYTVLL 355
A F+ + + + V T L+ L S+ A+LL D +K + TPN+ TY+ LL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
+ + ++EA ++ EM+ PD+V ++ ++ GL + +A ++F++M +KG
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 416 PNVRSYTIMIWKFCK--------------------QNAAVYTCLITGFGNRRRMDIVYDL 455
+V SY +I FCK N Y LI GF +D +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 456 LKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQ 515
+M+ G PD TYN L+ + ++A+ I+++M + I TY +++ +
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 516 TGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
TG E ++ + +G PD +YT ++ GL ++ E +M ++G+
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 364 LMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTI 423
L +A ++++M+ P +V N +L ++K+ K I L + M+ G ++ ++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 424 MIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKM 483
+I FC C ++ + +L +M + G PD +T +L+ +
Sbjct: 126 VINCFC-------CCF--------QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 484 PDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTV 543
+AV + +MV G+KP I YN I+ S +T + E+ R+G P+ +YT
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 544 LIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
L+ GL + R +A + L +M++K + V+ Y+ + G+ EL ++M
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLLS-METFKIAMNAFAAAKERKKA 298
G + +YN++++ +A++ E + + EM ++GL+S T+ + F A + KA
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGG 357
F M+ + + T N LL L + ++A ++F+ ++ R ++ TYT ++ G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C+ + EA ++ + KG KPD+V + M+ GL G + L+ MK +G N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%)
Query: 448 RMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYN 507
+++ DL +M + P + +N L+ + K D + + K+M G + ++T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 508 MIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEK 567
+++ + + + +M++ G PD + L+ G ++R +A +++M+E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 568 GMKAPVLDYNKFAADLSRAGR 588
G K ++ YN L + R
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKR 205
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 17/342 (4%)
Query: 260 QFETMVSMLEEMGE-KGLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTIN 318
QF + + M E + L S+ F +N A K+ + + + + + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 319 CLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDK 377
L+ +S P A K+ K F P++ T+T L+ G+C + EA + N+M++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 378 GFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYT 437
G KPDVV + +++ L K G + A+ LF+ M+ G P+V +YT
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV---------------VMYT 216
Query: 438 CLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRS 497
L+ G N R LL+ M +R PD +T+NALI + +A +Y EM+R
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 498 GFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEA 557
P I TY ++ + G + R+++ M +GC PD +YT LI G + +A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 558 YKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
K EM +KG+ + Y + G+ V E+ M
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 25/391 (6%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERK 296
K GF + T+ S+++ + E +SM+ +M E G+ + + +++
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 297 KAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEA-QLLFDKLKHRFTPNLTTYTVLL 355
A+++F+ M Y + V L+ L S ++A LL K + P++ T+ L+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 356 GGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPS 415
+ + ++A ++NEMI P++ + ++ G G +A ++F +M+ KG
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 416 PNVRSYTIMIWKFCK--------------------QNAAVYTCLITGFGNRRRMDIVYDL 455
P+V +YT +I FCK N YT LI GFG + ++ ++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 456 LKEMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVR---SGFKPTIHTYNMIMKS 512
M RG PP+ TYN L+ + +A+ I+++M + G P I TYN+++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 513 YFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAP 572
G E V+++M +R +YT++I G+ + A + KG+K
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 573 VLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
V+ Y + L R G + L +KM+ G
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 20/354 (5%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G +H+ T N +M+ ++ Q S L +M + G + TF +N F ++A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLK-HRFTPNLTTYTVLLGG 357
+++ M + K V ++++L ++ A LFD+++ + P++ YT L+ G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A + M + KPDV+ N +++ +K GK DA +L+ M +PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 418 VRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKL 477
+ +YT +I FC + D + ME +GC PD + Y +LI
Sbjct: 282 IFTYTSLINGFCMEGCV---------------DEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 478 MKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPD 537
K D+A++I+ EM + G TY +++ + Q G + ++V+ M+ RG P+
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 538 DNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMK--AP-VLDYNKFAADLSRAGR 588
+Y VL+ L + +A E+M ++ M AP + YN L G+
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 139/290 (47%), Gaps = 13/290 (4%)
Query: 281 TFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL 340
TF ++AF + A ++ M + + T L+ EA+ +F +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 341 KHRFT-PNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKR 399
+ + P++ YT L+ G+C+ K + +A +++ EM KG + + + +++G ++GK
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 400 SDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEM 459
+ A ++F M ++G PN+R+Y +++ C G ++ ++++ +++
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN------------GKVKKALMIFEDMQKR 416
Query: 460 EERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNY 519
E G P+ TYN L+ + ++A+ ++++M + I TY +I++ + G
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 520 EMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGM 569
+ ++ + +G P+ +YT +I GL + EA+ +M E G+
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 5/183 (2%)
Query: 238 KPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKERK 296
+ G N+ TY +++ G+ + + M +G+ ++ T+ + ++ + K
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 297 KAVAIFELMNKYKFKA---GVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYT 352
KA+ IFE M K + + T N LL L + ++A ++F+ ++ R + TYT
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 353 VLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAK 412
+++ G C+ + A ++ + KG KP+VV + M+ GL + G + +A LF MK
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 413 GPS 415
G S
Sbjct: 525 GVS 527
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 26/383 (6%)
Query: 197 NMEAVLDECGINLSHNLVVDVL---------ERFRHARRPAFRFFCWAGDKPGFAHNSRT 247
N ++ LDE +++S LV +VL + + A++FF W G + F H +
Sbjct: 95 NTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANC 154
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGLLSME-TFKIAMNAFAAAKERKKAVAIFELMN 306
Y+ +M I +++ M +++EM + G + TF + + A + V F
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDK-LKHRFTPNLTTYTVLLGGWCRVKNLM 365
+ ++ + N +L +L K K ++++ L+ FTP++ TY +++ R+
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
R+ +EM+ GF PD+ +NI+L L K A+ L M+ G P V +T
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT-- 332
Query: 426 WKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMPD 485
LI G +++ + E + GC PD + Y +I +
Sbjct: 333 -------------LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELE 379
Query: 486 EAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLI 545
+A ++KEM G P + TYN +++ + G ++ + EM RGC P+ Y+ L+
Sbjct: 380 KAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Query: 546 GGLISQDRSGEAYKYLEEMLEKG 568
L + + EA++ +++M+EKG
Sbjct: 440 NNLKNAGKVLEAHEVVKDMVEKG 462
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 173 KSTADPREIERVCKVIDELFSLDRNMEAVLDECGINL------SHNLVVDVLERFRHAR- 225
K A+ E + +C++IDE+ A C NL L DV+E+F ++
Sbjct: 160 KIFAECGEYKAMCRLIDEMIKDGYPTTA----CTFNLLICTCGEAGLARDVVEQFIKSKT 215
Query: 226 ---RP----------------AFRFFCWAGDK---PGFAHNSRTYNSMMSILGRARQFET 263
RP ++ W ++ GF + TYN +M R + +
Sbjct: 216 FNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR 275
Query: 264 MVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLE 322
+ +L+EM + G + T+ I ++ A + A+ + M + + GV L++
Sbjct: 276 LYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLID 335
Query: 323 NLGRS-KLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKP 381
L R+ KL + + +K TP++ YTV++ G+ L +A ++ EM +KG P
Sbjct: 336 GLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 382 DVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQNAAVYTCLIT 441
+V +N M+ G GK +A L + M+++G +PN VY+ L+
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF---------------VVYSTLVN 440
Query: 442 GFGNRRRMDIVYDLLKEMEERG 463
N ++ ++++K+M E+G
Sbjct: 441 NLKNAGKVLEAHEVVKDMVEKG 462
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 166/355 (46%), Gaps = 19/355 (5%)
Query: 246 RTYNSMMSILGRARQFETMVSMLEEMGEKGLLSMETFKIAMNAFAAAKERKKAVAIFELM 305
RT+++ S + + + M++ + L S+ F ++ A +K +++F M
Sbjct: 39 RTFSTKRSSMNLEEEIDLFCKMIQS---RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM 95
Query: 306 NKYKFKAGVDTINCLLENLGR-SKLPKEAQLLFDKLKHRFTPNLTTYTVLLGGWCRVKNL 364
+ + N ++ L R S+ ++ +K + P++ T + L+ G+C+ +
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 365 MEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIM 424
+A + ++M + GF+PDVV +N +++G KIG +DA++LF+ M+ G
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG----------- 204
Query: 425 IWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKIQKMP 484
+ +A Y L+ G R L+++M R P+ +T+ A+I + +
Sbjct: 205 ----VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVL 544
EA+++Y+EM R P + TYN ++ G + +++ D M+ +GC PD +Y L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 545 IGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKM 599
I G R E K EM ++G+ + YN +AGR E+ +M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 168/362 (46%), Gaps = 25/362 (6%)
Query: 248 YNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKAVAIFELMN 306
++ ++S + +++ ++ ++S+ M G+ + ++ I +N A+++ M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 307 KYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVLLGGWCRVKNLM 365
K+ ++ V T++ L+ + +A L K++ F P++ Y ++ G C++ +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 366 EAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIMI 425
+A +++ M G + D V +N ++ GL G+ SDA +L M + PNV ++T +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 426 WKFCKQ--------------------NAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCP 465
F K+ + Y LI G R+D +L M +GC
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 466 PDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKV 525
PD +TYN LI K DE ++++EM + G TYN I++ YFQ G + +++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 526 WDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSR 585
+ M R P+ +Y++L+ GL R +A E M + ++ + YN + +
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 586 AG 587
G
Sbjct: 429 IG 430
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 25/386 (6%)
Query: 240 GFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGL-LSMETFKIAMNAFAAAKERKKA 298
G H+ +YN +++ L R +F +S++ +M + G + T +N F A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 299 VAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKL-KHRFTPNLTTYTVLLGG 357
+ + M + F+ V N +++ + L +A LFD++ + + TY L+ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 358 WCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPN 417
C +A R+ +M+ + P+V+ +++ +K GK S+A+KL+E M + P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 418 VRSYT--------------------IMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLK 457
V +Y +M+ K C + Y LI GF +R+D L +
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 458 EMEERGCPPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTG 517
EM +RG D +TYN +I+ PD A I+ M +P I TY++++
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNW 395
Query: 518 NYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYN 577
E +++ M + D +Y ++I G+ +A+ + KG+K V+ Y
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 578 KFAADLSRAGRSYVLDELAQKMRFSG 603
+ R + D L +KM+ G
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 146/303 (48%), Gaps = 22/303 (7%)
Query: 237 DKPGFAHNSRTYNSMMSILGRARQFETMVSMLEEMGEKGLL-SMETFKIAMNAFAAAKER 295
++ G ++ TYNS+++ L + ++ ++ +M + ++ ++ TF ++ F +
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 296 KKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQLLFDKLKHR-FTPNLTTYTVL 354
+A+ ++E M + V T N L+ L EA+ + D + + P++ TY L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 355 LGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGP 414
+ G+C+ K + E +++ EM +G D + +N +++G + G+ A ++F M ++
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 415 SPNVRSYTIMIWKFCKQNAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNAL 474
PN+R+Y+I+++ C N V L+ L + M++ D TYN +
Sbjct: 379 -PNIRTYSILLYGLC-MNWRVEKALV--------------LFENMQKSEIELDITTYNIV 422
Query: 475 IKLM-KIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRG 533
I M KI + D A +++ + G KP + +Y ++ + + ++ ++ +M G
Sbjct: 423 IHGMCKIGNVED-AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 534 CCP 536
P
Sbjct: 482 LLP 484
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 54/119 (45%)
Query: 485 DEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVL 544
+E + ++ +M++S P+I ++ ++ ++ NY++ ++ M G D SY ++
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 545 IGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMRFSG 603
I L R A + +M++ G + V+ + + R + +L KM G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 194/435 (44%), Gaps = 32/435 (7%)
Query: 197 NMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFCWAGDKPGFAHNSRTYNSMMSILG 256
++E+ LDE GI S LV + +R + F WA KPGF + ++S+++ L
Sbjct: 87 SLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLC 146
Query: 257 RARQFETMVSMLEEM--GEKG--LLSMETFKIAMNAFAAAKERKKAVAIFELMNKY---- 308
+AR+FE S++ + ++G L+S +TF + + +A A ++A+ FE Y
Sbjct: 147 KAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVC 206
Query: 309 KFKAGVDTINCLLENLGRSKLPKEAQLLFDK----LKHRFTPNLTTYTVLLGGWCRVKNL 364
K + + LL+ L + +EA + ++ + + P++ + +LL GW R + L
Sbjct: 207 KSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKL 266
Query: 365 MEAGRVWNEMIDKGFKPDVVAHNIMLEGLLKIGKRSDAIKLFEVMKAKGPSPNVRSYTIM 424
+A ++W EM KP VV + ++EG ++ + A+++ E MK N + +
Sbjct: 267 KQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPI 326
Query: 425 I------------------WKFCKQNAAV--YTCLITGFGNRRRMDIVYDLLKEMEERGC 464
I + C+ + Y L+ F + +LK M RG
Sbjct: 327 IDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGV 386
Query: 465 PPDGLTYNALIKLMKIQKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRK 524
P TYN K +E + +Y +++ +G P TY++I+K + G + +
Sbjct: 387 DPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 525 VWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLS 584
V EM RG PD + T+LI L + EA++ + + +G+ + + L
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLR 506
Query: 585 RAGRSYVLDELAQKM 599
G S + L+ M
Sbjct: 507 SKGMSDMAKRLSSLM 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,502,192
Number of Sequences: 539616
Number of extensions: 9421059
Number of successful extensions: 38020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 29826
Number of HSP's gapped (non-prelim): 2866
length of query: 631
length of database: 191,569,459
effective HSP length: 124
effective length of query: 507
effective length of database: 124,657,075
effective search space: 63201137025
effective search space used: 63201137025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)