BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036081
(614 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 189/322 (58%), Gaps = 10/322 (3%)
Query: 251 KRKRNALHEEFVRSFKDSVLPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLE 310
+RK+ H V + +D + K F EL A+ FS KN++G+G G VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 311 DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
DGTLVAVK++ + +G E +F EVE+IS HRNLL LRG C++ + R LVY
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYP 115
Query: 370 FMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+M +GS+ + ++ L WP+R++I L A+GLAYLH P I HRD+K+ NILL
Sbjct: 116 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 175
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILE 488
D E +A V DFGLAK H+ V GT G++APEY G+ +EK+DV+ +G+++LE
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 489 LMSGRKVLE---TSNSSFLLITDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGIL 545
L++G++ + +N +++ DW L K++ + D ++ +E+ ++V +L
Sbjct: 236 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALL 295
Query: 546 CAHVMVALRPTIADALKMLEGD 567
C RP +++ ++MLEGD
Sbjct: 296 CTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 177/297 (59%), Gaps = 10/297 (3%)
Query: 276 KWFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-EFINE 334
K F EL A+ F KN++G+G G VYKG L DG LVAVK++ + T+G E +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 335 VEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQ 393
VE+IS HRNLL LRG C++ + R LVY +M +GS+ + ++ L WP+
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
R++I L A+GLAYLH P I HRD+K+ NILLD E +A V DFGLAK H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 454 TRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLE---TSNSSFLLITDWA 510
V G G++APEY G+ +EK+DV+ +G+++LEL++G++ + +N +++ DW
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 511 WMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGD 567
L K++ + D ++ +E+ ++V +LC RP +++ ++MLEGD
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 171/287 (59%), Gaps = 11/287 (3%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI 341
+L++AT F K LIG G G VYKG L DG VA+K+ T ++G EEF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILD 400
RH +L+SL G C DE+ + L+Y +M +G+L H+ + L ++W QR +I +
Sbjct: 93 RHPHLVSLIGFC----DERNE-MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-GQSHLTTRVAGT 459
A+GL YLH AI HRD+KS NILLD K+ DFG++K+ E GQ+HL V GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRK-VLETSNSSFLLITDWAWMLANSGK 518
GY+ PEY + G+LTEKSDVYSFG+V+ E++ R ++++ + + +WA N+G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 519 VDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+++I D + ++ + +F + C + RP++ D L LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 170/287 (59%), Gaps = 11/287 (3%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI 341
+L++AT F K LIG G G VYKG L DG VA+K+ T ++G EEF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILD 400
RH +L+SL G C DE+ + L+Y +M +G+L H+ + L ++W QR +I +
Sbjct: 93 RHPHLVSLIGFC----DERNE-MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-GQSHLTTRVAGT 459
A+GL YLH AI HRD+KS NILLD K+ DFG++K+ E Q+HL V GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRK-VLETSNSSFLLITDWAWMLANSGK 518
GY+ PEY + G+LTEKSDVYSFG+V+ E++ R ++++ + + +WA N+G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 519 VDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+++I D + ++ + +F + C + RP++ D L LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 161/299 (53%), Gaps = 22/299 (7%)
Query: 278 FRESELDQATGGFSQK------NLIGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG- 327
F EL T F ++ N +G+G GVVYKG + + T VAVK++ D+ T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 328 DEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK 387
++F E+++++K +H NL+ L G DD LVY +MP+GSL D +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 388 QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
L+W R KI A G+ +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 448 -GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLI 506
Q+ + +R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G ++ LL+
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 507 TDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+ +++ D+ + + S +V E V C H RP I ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 278 FRESELDQATGGFSQK------NLIGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG- 327
F EL T F ++ N +G+G GVVYKG + + T VAVK++ D+ T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 328 DEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK 387
++F E+++++K +H NL+ L G DD LVY +MP+GSL D +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 388 QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
L+W R KI A G+ +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 448 -GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLI 506
Q+ + R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G ++ LL+
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 507 TDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+ +++ D+ + + S +V E V C H RP I ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 22/299 (7%)
Query: 278 FRESELDQATGGFSQK------NLIGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG- 327
F EL T F ++ N +G+G GVVYKG + + T VAVK++ D+ T+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 328 DEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK 387
++F E+++++K +H NL+ L G DD LVY +MP+GSL D +S
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 388 QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
L+W R KI A G+ +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 448 -GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLI 506
Q + R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G ++ LL+
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 507 TDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+ +++ D+ + + S +V E V C H RP I ++L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 22/299 (7%)
Query: 278 FRESELDQATGGFSQK------NLIGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG- 327
F EL T F ++ N G+G GVVYKG + + T VAVK++ D+ T+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 328 DEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK 387
++F E+++ +K +H NL+ L G DD LVY + P+GSL D +S
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDD-----LCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 388 QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
L+W R KI A G+ +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 448 -GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLI 506
Q +R+ GT Y APE AL G++T KSD+YSFG+V+LE+++G ++ LL+
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 507 TDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
+ +++ D+ + S +V E V C H RP I ++L+
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDADSTSV-EAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 12/202 (5%)
Query: 293 KNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE--EFINEVEIISKIRHRNLLSLR 350
K IG G+ G V++ G+ VAVK + + D + EF+ EV I+ ++RH N++
Sbjct: 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G + +V +++ GSL + + R+QL +R + DVAKG+ YLH
Sbjct: 101 GAVTQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH- 154
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR-VAGTYGYLAPEYAL 469
P I HRD+KS N+L+D + KV DFGL++ L+ L ++ AGT ++APE
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 470 YGQLTEKSDVYSFGIVILELMS 491
EKSDVYSFG+++ EL +
Sbjct: 213 DEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 12/200 (6%)
Query: 293 KNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE--EFINEVEIISKIRHRNLLSLR 350
K IG G+ G V++ G+ VAVK + + D + EF+ EV I+ ++RH N++
Sbjct: 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G + +V +++ GSL + + R+QL +R + DVAKG+ YLH
Sbjct: 101 GAVTQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH- 154
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR-VAGTYGYLAPEYAL 469
P I HR++KS N+L+D + KV DFGL++ L+ + L+++ AGT ++APE
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 470 YGQLTEKSDVYSFGIVILEL 489
EKSDVYSFG+++ EL
Sbjct: 213 DEPSNEKSDVYSFGVILWEL 232
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ KIRH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 76 SEEPI----YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 127
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 186 TIKSDVWSFGILLTELTTKGRV 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 248
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 248
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 71
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 72 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 123
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 182 TIKSDVWSFGILLTELTTKGRV 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 332 SEEPI----YIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 383
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 442 TIKSDVWSFGILLTELTTKGRV 463
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 79
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 190 TIKSDVWSFGILLTELTTKGRV 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 73
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 74 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 125
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 184 TIKSDVWSFGILLTELTTKGRV 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 248
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 79
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 190 TIKSDVWSFGILLTELTTKGRV 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 72
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ +V ++M GSL D + T K L PQ + +A G+AY+ +
Sbjct: 73 SEEPI----XIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMN 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 183 TIKSDVWSFGILLTELTTKGRV 204
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M G L D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+ + NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + T E F+ E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M G L D + + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGLA+ L + T R + + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+GQG G V+ GT T VA+K + E F+ E +++ K+RH L+ L V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 249
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + K L PQ + +A G+AY+ +
Sbjct: 250 SEEPI----YIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMN 301
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + KVADFGL + L + T R + + APE ALYG+
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ EL + +V
Sbjct: 360 TIKSDVWSFGILLTELTTKGRV 381
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 46/256 (17%)
Query: 296 IGQGASGVVYKGTL-EDGTLVAVKQITDLDTKGD-------EEFINEVEIISKIRHRNLL 347
IG+G G+V+KG L +D ++VA+K + D++G+ +EF EV I+S + H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G + +V +F+P G L + + + W + +++LD+A G+ Y
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDS-----EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
+ P I HRD++S NI L S + AKVADFGL++QS+ H + + G + +
Sbjct: 138 MQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV----HSVSGLLGNFQW 192
Query: 463 LAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVD 520
+APE A TEK+D YSF +++ +++G + ++++ GK+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----------EYSY-----GKIK 237
Query: 521 EIFDEFIREEGSRAVM 536
F IREEG R +
Sbjct: 238 --FINMIREEGLRPTI 251
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 25/220 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ GT T VA+K + T E F+ E +I+ K++H L+ L V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
S++ ++V ++M GSL D + + R L P + VA G+AY+ +
Sbjct: 74 SEEPI----YIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIE---RMN 125
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD++S NIL+ + + K+ADFGLA+ L + T R + + APE ALYG+
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 474 TEKSDVYSFGIVILEL----------MSGRKVLETSNSSF 503
T KSDV+SFGI++ EL M+ R+VLE +
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 46/256 (17%)
Query: 296 IGQGASGVVYKGTL-EDGTLVAVKQITDLDTKGD-------EEFINEVEIISKIRHRNLL 347
IG+G G+V+KG L +D ++VA+K + D++G+ +EF EV I+S + H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G + +V +F+P G L + + + W + +++LD+A G+ Y
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDS-----EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
+ P I HRD++S NI L S + AKVADFG ++QS+ H + + G + +
Sbjct: 138 MQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV----HSVSGLLGNFQW 192
Query: 463 LAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVD 520
+APE A TEK+D YSF +++ +++G + ++++ GK+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----------EYSY-----GKIK 237
Query: 521 EIFDEFIREEGSRAVM 536
F IREEG R +
Sbjct: 238 --FINMIREEGLRPTI 251
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 46/256 (17%)
Query: 296 IGQGASGVVYKGTL-EDGTLVAVKQITDLDTKGD-------EEFINEVEIISKIRHRNLL 347
IG+G G+V+KG L +D ++VA+K + D++G+ +EF EV I+S + H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G + +V +F+P G L + + + W + +++LD+A G+ Y
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDS-----EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
+ P I HRD++S NI L S + AKVADF L++QS+ H + + G + +
Sbjct: 138 MQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV----HSVSGLLGNFQW 192
Query: 463 LAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVD 520
+APE A TEK+D YSF +++ +++G + ++++ GK+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----------EYSY-----GKIK 237
Query: 521 EIFDEFIREEGSRAVM 536
F IREEG R +
Sbjct: 238 --FINMIREEGLRPTI 251
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 281 SELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISK 340
S +D + F Q+ IG G G+V+ G + VA+K I + +E+FI E E++ K
Sbjct: 2 SVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMK 58
Query: 341 IRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
+ H L+ L G C+ LV++FM G L D++ R A + LD
Sbjct: 59 LSHPKLVQLYGVCLEQ-----APICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLD 111
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY 460
V +G+AYL + ++ HRD+ + N L+ KV+DFG+ + L+ Q +T
Sbjct: 112 VCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
+ +PE + + + KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G G+V+ G + VA+K I + +E+FI E E++ K+ H L+ L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
LV++FM G L D++ R A + LDV +G+AYL +
Sbjct: 72 Q-----APICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 121
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
+ HRD+ + N L+ KV+DFG+ + L+ Q +T + +PE + + +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 476 KSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 281 SELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISK 340
S +D + F Q+ IG G G+V+ G + VA+K I + +E+FI E E++ K
Sbjct: 2 SVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMK 58
Query: 341 IRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
+ H L+ L G C+ LV++FM G L D++ R A + LD
Sbjct: 59 LSHPKLVQLYGVCLEQ-----APICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLD 111
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY 460
V +G+AYL + + HRD+ + N L+ KV+DFG+ + L+ Q +T
Sbjct: 112 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
+ +PE + + + KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G G+V+ G + VA+K I + +E+FI E E++ K+ H L+ L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
LV++FM G L D++ R A + LDV +G+AYL +
Sbjct: 77 Q-----APICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 126
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
+ HRD+ + N L+ KV+DFG+ + L+ Q +T + +PE + + +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 476 KSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G G+V+ G + VA+K I + + +++FI E E++ K+ H L+ L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
LV++FM G L D++ R A + LDV +G+AYL +
Sbjct: 94 Q-----APICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 143
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
+ HRD+ + N L+ KV+DFG+ + L+ Q +T + +PE + + +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 476 KSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 236
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G G+V+ G + VA+K I + +E+FI E E++ K+ H L+ L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
LV +FM G L D++ R A + LDV +G+AYL +
Sbjct: 75 Q-----APICLVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
+ HRD+ + N L+ KV+DFG+ + L+ Q +T + +PE + + +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 476 KSDVYSFGIVILELMSGRKVLETSNSSFLLITD 508
KSDV+SFG+++ E+ S K+ + S+ ++ D
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGL 412
+ +V + SL H+ + T+ ++ KK+I A+G+ YLH
Sbjct: 92 P------QLAIVTQWCEGSSLYHHLHASETKFEM-----KKLIDIARQTARGMDYLH--- 137
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPEYALY- 470
+I HRD+KS NI L + K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 471 --GQLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 9 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 54
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 55 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 110
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 111 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQS---HLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 223 GVLLWELMT 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 11 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 56
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 57 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 112
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 113 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ L+ + H T ++A E + T KSDV+SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 225 GVLLWELMT 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGL 412
+ +V + SL H+ + T+ ++ KK+I A+G+ YLH
Sbjct: 92 P------QLAIVTQWCEGSSLYHHLHASETKFEM-----KKLIDIARQTARGMDYLH--- 137
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPEYALY- 470
+I HRD+KS NI L + K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 471 --GQLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 29 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 74
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 75 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 130
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 131 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 182
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 243 GVLLWELMT 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 10 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 55
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 56 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 111
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 112 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 224 GVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 7 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 52
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 53 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 108
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 109 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 160
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 221 GVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 2 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 47
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 48 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 103
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 104 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 155
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 216 GVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 28 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 73
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 74 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 129
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 130 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 181
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 242 GVLLWELMT 250
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGL 412
+ +V + SL H+ + T+ ++ KK+I A+G+ YLH
Sbjct: 80 P------QLAIVTQWCEGSSLYHHLHASETKFEM-----KKLIDIARQTARGMDYLH--- 125
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY- 470
+I HRD+KS NI L + K+ DFGLA +S SH +++G+ ++APE
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 471 --GQLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 9 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 54
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 55 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 110
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 111 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 223 GVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 8 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 53
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 54 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 109
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 110 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 161
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 222 GVLLWELMT 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 10 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 55
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 56 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 111
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 112 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 224 GVLLWELMT 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 5 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 50
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 51 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 106
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ YL HRD+ + N
Sbjct: 107 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 158
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 219 GVLLWELMT 227
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 96 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 144
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IGQGASG VY + G VA++Q+ E INE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +++ GSL D ++ + Q+A + + + L +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN-- 135
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS NILL + K+ DFG Q QS +T V GT ++APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 474 TEKSDVYSFGIVILELMSGRKVLETSN---SSFLLITDWAWMLANSGKVDEIFDEFI--- 527
K D++S GI+ +E++ G N + +L+ T+ L N K+ IF +F+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 528 -------REEGSRAVMERFVRVGILCAHVMVALRPTIADA 560
R + +F+++ A + +L P IA A
Sbjct: 254 LDMDVEKRGSAKELLQHQFLKI----AKPLSSLTPLIAAA 289
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + ++ D + + F NEV ++ K RH N+L G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ Q+ Q I A+G+ YLH
Sbjct: 104 DNLA------IVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLH---AKN 152
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L + K+ DFGLA +S S + G+ ++APE
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 472 QLTEKSDVYSFGIVILELMSG 492
+ +SDVYS+GIV+ ELM+G
Sbjct: 213 PFSFQSDVYSYGIVLYELMTG 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 78 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 126
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 81 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 129
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 81 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 129
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 152
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 8 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 53
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 54 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 109
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 110 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 161
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 222 GVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 69 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 114
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 115 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 170
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I R + P K +I L VAKG+ +L HRD+ + N
Sbjct: 171 PYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 222
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 283 GVLLWELMT 291
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 152
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 11 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 56
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 57 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 112
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 113 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 225 GVLLWELMT 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG G+ G VYKG V + +T + + F NEV ++ K RH N+L G
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +V + SL H+ T+ ++ + I A+G+ YLH +
Sbjct: 103 P------QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH---AKS 151
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYALY---G 471
I HRD+KS NI L ++ K+ DFGLA +S SH +++G+ ++APE
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+ +SDVY+FGIV+ ELM+G+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 15 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 60
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 61 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 116
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 117 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 168
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 169 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 228
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 229 GVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 10 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 55
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 56 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 111
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 112 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 224 GVLLWELMT 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IGQGASG VY + G VA++Q+ E INE+ ++ + ++ N+++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +++ GSL D ++ + Q+A + + + L +LH
Sbjct: 89 VGDE-----LWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN-- 136
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HR+IKS NILL + K+ DFG Q QS +T V GT ++APE
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 474 TEKSDVYSFGIVILELMSGRKVLETSN---SSFLLITDWAWMLANSGKVDEIFDEFI--- 527
K D++S GI+ +E++ G N + +L+ T+ L N K+ IF +F+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 528 -------REEGSRAVMERFVRVGILCAHVMVALRPTIADA 560
R + +F+++ A + +L P IA A
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKI----AKPLSSLTPLIAAA 290
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IGQGASG VY + G VA++Q+ E INE+ ++ + ++ N+++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +++ GSL D ++ + Q+A + + + L +LH
Sbjct: 89 VGDE-----LWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN-- 136
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS NILL + K+ DFG Q QS + V GT ++APE
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 194
Query: 474 TEKSDVYSFGIVILELMSGRKVLETSN---SSFLLITDWAWMLANSGKVDEIFDEFI--- 527
K D++S GI+ +E++ G N + +L+ T+ L N K+ IF +F+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 528 -------REEGSRAVMERFVRVGILCAHVMVALRPTIADA 560
R + +F+++ A + +L P IA A
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKI----AKPLSSLTPLIAAA 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 255 NALHEEFVRSFKDSVL-PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
+AL+ E V++ + V+ P+S F E +IG+G G VY GTL D
Sbjct: 10 SALNPELVQAVQHVVIGPSSLIVHFNE--------------VIGRGHFGCVYHGTLLDND 55
Query: 312 GTLV--AVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVY 368
G + AVK + + G+ +F+ E I+ H N+LSL G C+ S+ +V
Sbjct: 56 GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP----LVVL 111
Query: 369 DFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGLAYLHYGLKPAIYHRDIKSTN 425
+M G L + I N P K +I L VAKG+ +L HRD+ + N
Sbjct: 112 PYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 426 ILLDSEMKAKVADFGLAKQSLEGQ---SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSF 482
+LD + KVADFGLA+ + + H T ++A E + T KSDV+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 483 GIVILELMS 491
G+++ ELM+
Sbjct: 224 GVLLWELMT 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 20/279 (7%)
Query: 296 IGQGASGVV----YKGTLEDGT--LVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLLS 348
+G+G G V Y T DGT +VAVK + D + + E++I+ + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+GCC +D+ K LV +++P GSL D+ L R + Q + +G+AYL
Sbjct: 81 YKGCC---EDQGEKSLQLVMEYVPLGSLRDY----LPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPE 466
H HR++ + N+LLD++ K+ DFGLAK EG + R G + APE
Sbjct: 134 H---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
+ SDV+SFG+ + EL++ ++ + FL + A ++ E+ +
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 527 IREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
R + C + RPT + + +L+
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IGQGASG VY + G VA++Q+ E INE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +++ GSL D ++ + Q+A + + + L +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN-- 135
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS NILL + K+ DFG Q QS + V GT ++APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 193
Query: 474 TEKSDVYSFGIVILELMSGRKVLETSN---SSFLLITDWAWMLANSGKVDEIFDEFI--- 527
K D++S GI+ +E++ G N + +L+ T+ L N K+ IF +F+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 528 -------REEGSRAVMERFVRVGILCAHVMVALRPTIADA 560
R + +F+++ A + +L P IA A
Sbjct: 254 LEMDVEKRGSAKELLQHQFLKI----AKPLSSLTPLIAAA 289
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 20/279 (7%)
Query: 296 IGQGASGVV----YKGTLEDGT--LVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLLS 348
+G+G G V Y T DGT +VAVK + D + + E++I+ + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+GCC +D+ K LV +++P GSL D+ L R + Q + +G+AYL
Sbjct: 81 YKGCC---EDQGEKSLQLVMEYVPLGSLRDY----LPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPE 466
H HR++ + N+LLD++ K+ DFGLAK EG + R G + APE
Sbjct: 134 H---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
+ SDV+SFG+ + EL++ ++ + FL + A ++ E+ +
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 527 IREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
R + C + RPT + + +L+
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IGQGASG VY + G VA++Q+ E INE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +++ GSL D ++ + Q+A + + + L +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN-- 135
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS NILL + K+ DFG Q QS + V GT ++APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAY 193
Query: 474 TEKSDVYSFGIVILELMSGRKVLETSN---SSFLLITDWAWMLANSGKVDEIFDEFI--- 527
K D++S GI+ +E++ G N + +L+ T+ L N K+ IF +F+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 528 -------REEGSRAVMERFVRVGILCAHVMVALRPTIADA 560
R + +F+++ A + +L P IA A
Sbjct: 254 LDMDVEKRGSAKELLQHQFLKI----AKPLSSLTPLIAAA 289
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 168
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 169 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 222
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 223 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 134
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 142
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 143 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 196
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 197 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 18/220 (8%)
Query: 293 KNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+ ++G+GA GVV K VA+KQI + + FI E+ +S++ H N++ L G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
C++ LV ++ GSL + + A L ++G+AYLH
Sbjct: 71 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 413 KPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
A+ HRD+K N+LL + K+ DFG A + Q+H+T G+ ++APE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGS 179
Query: 472 QLTEKSDVYSFGIVILELMSGRKVL-ETSNSSFLLITDWA 510
+EK DV+S+GI++ E+++ RK E +F ++ WA
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 153
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 154 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 207
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 208 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 135
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 136 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 189
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 190 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 134
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 146
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 147 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 200
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 201 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 146
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 147 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 200
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 201 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 18/220 (8%)
Query: 293 KNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+ ++G+GA GVV K VA+KQI + + FI E+ +S++ H N++ L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
C++ LV ++ GSL + + A L ++G+AYLH
Sbjct: 70 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 413 KPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
A+ HRD+K N+LL + K+ DFG A + Q+H+T G+ ++APE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGS 178
Query: 472 QLTEKSDVYSFGIVILELMSGRKVL-ETSNSSFLLITDWA 510
+EK DV+S+GI++ E+++ RK E +F ++ WA
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 138
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 139 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 192
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 193 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 162
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 163 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 216
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 217 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 168
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 169 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 222
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 223 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 147
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 148 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 201
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 202 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 139
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 140 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 193
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 194 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 170
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 171 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 224
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 225 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 134
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 188
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 172
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 173 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 226
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 227 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K + LV D++P + H S A ++ L K + + +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 213
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 214 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-Y 267
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 268 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 20/279 (7%)
Query: 296 IGQGASGVV----YKGTLEDGT--LVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLLS 348
+G+G G V Y T DGT +VAVK + D + + E++I+ + H +++
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+GCC +D LV +++P GSL D+ L R + Q + +G+AYL
Sbjct: 98 YKGCC---EDAGAASLQLVMEYVPLGSLRDY----LPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPE 466
H HRD+ + N+LLD++ K+ DFGLAK EG R G + APE
Sbjct: 151 H---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
+ SDV+SFG+ + EL++ ++ + FL + A ++ E+ +
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267
Query: 527 IREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLE 565
R + C + RPT + + +L+
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 117/216 (54%), Gaps = 23/216 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-EVEIISKIRHRNLL 347
++ +IG G+ GVVY+ L D G LVA+K++ D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 348 SLRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKG 404
LR SS ++K LV D++P + H S A ++ L K + + +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRS 134
Query: 405 LAYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGY 462
LAY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 463 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 37/250 (14%)
Query: 256 ALHEEFVRSFKDS-VLPNSGA-KWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--ED 311
L E V S PN + +E+EL + ++G GA G VYKG E
Sbjct: 11 GLETELVEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEG 63
Query: 312 GTL---VAVKQITDL-DTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLV 367
T+ VA+K + + K + EF++E I++ + H +L+ L G C+S + LV
Sbjct: 64 ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LV 117
Query: 368 YDFMPSGSL----GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKS 423
MP G L +H N ++ L W + +AKG+ YL + + HRD+ +
Sbjct: 118 TQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAA 168
Query: 424 TNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQLTEKSDVYS 481
N+L+ S K+ DFGLA+ LEG G ++A E Y + T +SDV+S
Sbjct: 169 RNVLVKSPNHVKITDFGLAR-LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWS 227
Query: 482 FGIVILELMS 491
+G+ I ELM+
Sbjct: 228 YGVTIWELMT 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 31/225 (13%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQI---TDLD-TKGDEEFINEVEI 337
E+D A + + +IG G G VY+ G VAVK D D ++ E E ++
Sbjct: 3 EIDFAE--LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 338 ISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+ ++H N+++LRG C+ K LV +F G L + L+ K++
Sbjct: 60 FAMLKHPNIIALRGVCL-----KEPNLCLVMEFARGGPL----NRVLSGKRIPPDILVNW 110
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--------AKVADFGLAKQSLEGQ 449
+ +A+G+ YLH I HRD+KS+NIL+ +++ K+ DFGLA++
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW---- 166
Query: 450 SHLTTRV--AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
H TT++ AG Y ++APE ++ SDV+S+G+++ EL++G
Sbjct: 167 -HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 94
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 95 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 145
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 485 VILELMS 491
V+ EL +
Sbjct: 206 VLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 5 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 120
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 121 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 171
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 172 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 278 FRESELDQATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVE 336
FR S+L ++G+G G K T E G ++ +K++ D + F+ EV+
Sbjct: 7 FRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK 59
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKK 396
++ + H N+L G K KR + +++ G+L I + + Q W QR
Sbjct: 60 VMRCLEHPNVLKFIGVLY-----KDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVS 112
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA------KQSLEGQS 450
D+A G+AYLH I HRD+ S N L+ VADFGLA K EG
Sbjct: 113 FAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 451 HLTT-------RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L V G ++APE EK DV+SFGIV+ E++
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 21/215 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
++ +IG G+ GVVY+ L D G LVA+K++ +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 349 LRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
LR SS ++K + LV D++P+ + H S A ++ L K + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRA--KQTLPVIYVKLYMYQLFRSL 135
Query: 406 AYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
AY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YR 189
Query: 464 APEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 190 APE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 7 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 66
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 122
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 123 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 173
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 174 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 6 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 121
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 122 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 172
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 173 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 120 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 170
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 4 DRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +F+P GSL +++ R K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL 119
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 120 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 170
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 32 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 91
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 148 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 198
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 199 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 36/234 (15%)
Query: 271 PNSGA-KWFRESELDQATGGFSQKNLIGQGASGVVYKGTL--EDGTL---VAVKQITDL- 323
PN + +E+EL + ++G GA G VYKG E T+ VA+K + +
Sbjct: 4 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 324 DTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL----GDH 379
K + EF++E I++ + H +L+ L G C+S + LV MP G L +H
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEH 110
Query: 380 ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADF 439
N ++ L W + +AKG+ YL + + HRD+ + N+L+ S K+ DF
Sbjct: 111 KDNIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDF 161
Query: 440 GLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
GLA+ LEG G ++A E Y + T +SDV+S+G+ I ELM+
Sbjct: 162 GLAR-LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 93
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 94 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 144
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 145 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 204
Query: 485 VILELMS 491
V+ EL +
Sbjct: 205 VLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 92
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 93 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 143
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 144 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 203
Query: 485 VILELMS 491
V+ EL +
Sbjct: 204 VLYELFT 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL 119
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 120 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 170
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 94
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 95 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 145
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 485 VILELMS 491
V+ EL +
Sbjct: 206 VLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 284 DQATGGFSQKNL-----IGQGASGVVYK---GTLED--GTLVAVKQITDLDTKGDEEFIN 333
D+ F +++L +G+G G V L+D G +VAVK++ + +F
Sbjct: 8 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 67
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTR----KQ 388
E+EI+ ++H N++ +G C S+ G+R L+ +++P GSL D++ R K
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 123
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + + + KG+ YL G K I HRD+ + NIL+++E + K+ DFGL K +
Sbjct: 124 LQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQD 174
Query: 449 QSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + G + APE + + SDV+SFG+V+ EL +
Sbjct: 175 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 296 IGQGASGVVYKGTL-EDGTLVAVKQI---TDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
+G+G+ G VYK E G +VA+KQ+ +DL +E I E+ I+ + +++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPHVVKYYG 91
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ D ++V ++ +GS+ D I L K L + I+ KGL YLH+
Sbjct: 92 SYFKNTD-----LWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
K HRDIK+ NILL++E AK+ADFG+A Q + + V GT ++APE
Sbjct: 145 RK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEI 200
Query: 472 QLTEKSDVYSFGIVILELMSGR 493
+D++S GI +E+ G+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 94
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 95 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 145
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 146 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 205
Query: 485 VILELMS 491
V+ EL +
Sbjct: 206 VLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 112
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 113 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 163
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT--YGYLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 485 VILELMS 491
V+ EL +
Sbjct: 224 VLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 95
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HR++ + NI
Sbjct: 96 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRNLATRNI 146
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + + G + APE + + SDV+SFG+
Sbjct: 147 LVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 206
Query: 485 VILELMS 491
V+ EL +
Sbjct: 207 VLYELFT 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDF 370
G +VAVK++ + +F E+EI+ ++H N++ +G C S+ G+R L+ ++
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA----GRRNLKLIMEY 112
Query: 371 MPSGSLGDHISNALTR----KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI 426
+P GSL D++ R K L + + + KG+ YL G K I HRD+ + NI
Sbjct: 113 LPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL--GTKRYI-HRDLATRNI 163
Query: 427 LLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGI 484
L+++E + K+ DFGL K + + + G + APE + + SDV+SFG+
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 485 VILELMS 491
V+ EL +
Sbjct: 224 VLYELFT 230
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 21/215 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
++ +IG G+ GVVY+ L D G LVA+K++ +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 349 LRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
LR SS ++K + LV D++P + H S A ++ L K + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRSL 135
Query: 406 AYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
AY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-YR 189
Query: 464 APEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 190 APE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 21/215 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
++ +IG G+ GVVY+ L D G LVA+K++ +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 349 LRGCCVSSDDEKGKRRF-LVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
LR SS ++K + LV D++P + H S A ++ L K + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIYVKLYMYQLFRSL 135
Query: 406 AYLH-YGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
AY+H +G I HRDIK N+LLD + K+ DFG AKQ + G+ +++ + Y Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRY-YR 189
Query: 464 APEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
APE ++G T DV+S G V+ EL+ G+ +
Sbjct: 190 APE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 90 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 140
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N L++ + KV+DFGL++ L+ + + + PE +Y + +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 476 KSDVYSFGIVILELMS 491
KSD+++FG+++ E+ S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 73 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ L T + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTFTAHAGAKFPIKWTAPES 181
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 80 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 133
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 188
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 73
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 74 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+ + N L++ + KV+DFGL++ L+ + T+ V + + PE +Y +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 474 TEKSDVYSFGIVILELMS 491
+ KSD+++FG+++ E+ S
Sbjct: 183 SSKSDIWAFGVLMWEIYS 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 80 LGVCT-----REPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 188
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV++FG+++ E+ +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 69
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 70 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 120
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+ + N L++ + KV+DFGL++ L+ + T+ V + + PE +Y +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 474 TEKSDVYSFGIVILELMS 491
+ KSD+++FG+++ E+ S
Sbjct: 179 SSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 75 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 125
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+ + N L++ + KV+DFGL++ L+ + T+ V + + PE +Y +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 474 TEKSDVYSFGIVILELMS 491
+ KSD+++FG+++ E+ S
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 73 LGVCT-----REPPFYIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ L T + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPES 181
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 90 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 140
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQL 473
HRD+ + N L++ + KV+DFGL++ L+ + T+ V + + PE +Y +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 474 TEKSDVYSFGIVILELMS 491
+ KSD+++FG+++ E+ S
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 93
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C ++V ++MP G+L D++ R+++ + ++ + YL
Sbjct: 94 LGVCTLEPP-----FYIVTEYMPYGNLLDYLREC-NREEVTAVVLLYMATQISSAMEYLE 147
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 148 ---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 202
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + KSDV++FG+++ E+
Sbjct: 203 LAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 80 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 188
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVV----YKGTLEDGT--LVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLS 348
+G+G G V Y T DGT +VAVK + + + + E+EI+ + H +++
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+GCC +D+ K LV +++P GSL D+ L R + Q + +G+AYL
Sbjct: 76 YKGCC---EDQGEKSVQLVMEYVPLGSLRDY----LPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPE 466
H HR + + N+LLD++ K+ DFGLAK EG + R G + APE
Sbjct: 129 H---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SDV+SFG+ + EL++
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVV----YKGTLEDGT--LVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLS 348
+G+G G V Y T DGT +VAVK + + + + E+EI+ + H +++
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+GCC +D+ K LV +++P GSL D+ L R + Q + +G+AYL
Sbjct: 75 YKGCC---EDQGEKSVQLVMEYVPLGSLRDY----LPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPE 466
H HR + + N+LLD++ K+ DFGLAK EG + R G + APE
Sbjct: 128 H---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SDV+SFG+ + EL++
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 75 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 183
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG+G G V G G VAVK I + T + F+ E +++++RH NL+ L G V
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+EKG ++V ++M GSL D++ + R L K LDV + + YL
Sbjct: 257 --EEKGGL-YIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N+L+ + AKV+DFGL K++ Q V T APE + +
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFST 365
Query: 476 KSDVYSFGIVILELMSGRKV 495
KSDV+SFGI++ E+ S +V
Sbjct: 366 KSDVWSFGILLWEIYSFGRV 385
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG+G G V G G VAVK I + T + F+ E +++++RH NL+ L G V
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+EKG ++V ++M GSL D++ + R L K LDV + + YL
Sbjct: 70 --EEKGGL-YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N+L+ + AKV+DFGL K++ Q V T APE + +
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFST 178
Query: 476 KSDVYSFGIVILELMSGRKV 495
KSDV+SFGI++ E+ S +V
Sbjct: 179 KSDVWSFGILLWEIYSFGRV 198
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 78
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 79 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 132
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 133 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 187
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEI 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 80
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 81 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 131
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+ + N L++ + KV+DFGL++ L+ + T+ V + + PE +Y +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 474 TEKSDVYSFGIVILELMS 491
+ KSD+++FG+++ E+ S
Sbjct: 190 SSKSDIWAFGVLMWEIYS 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG+G G V G G VAVK I + T + F+ E +++++RH NL+ L G V
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+EKG ++V ++M GSL D++ + R L K LDV + + YL
Sbjct: 76 --EEKGGL-YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N+L+ + AKV+DFGL K++ Q V T APE +
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFST 184
Query: 476 KSDVYSFGIVILELMSGRKV 495
KSDV+SFGI++ E+ S +V
Sbjct: 185 KSDVWSFGILLWEIYSFGRV 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
IG+G G V G G VAVK I + T + F+ E +++++RH NL+ L G V
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 84
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+EKG ++V ++M GSL D++ + R L K LDV + + YL
Sbjct: 85 --EEKGGL-YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE---GNN 137
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N+L+ + AKV+DFGL K++ Q V T APE + +
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFST 193
Query: 476 KSDVYSFGIVILELMSGRKV 495
KSDV+SFGI++ E+ S +V
Sbjct: 194 KSDVWSFGILLWEIYSFGRV 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 76 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 129
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT---YGYLAPE 466
K HRD+ + N L+ KVADFGL++ + G ++ T AG + APE
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPIKWTAPE 183
Query: 467 YALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 281 SELDQATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIIS 339
S L G F L+G G G VYKG ++ G L A+K + D+ +EE E+ ++
Sbjct: 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIK-VMDVTGDEEEEIKQEINMLK 75
Query: 340 KI-RHRNLLSLRGCCVSSDDE-KGKRRFLVYDFMPSGSLGDHIS----NALTRKQLAWPQ 393
K HRN+ + G + + + +LV +F +GS+ D I N L + +A+
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-- 133
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
I ++ +GL++LH + + HRDIK N+LL + K+ DFG++ Q L+
Sbjct: 134 ---ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ-LDRTVGRR 186
Query: 454 TRVAGTYGYLAPEYALYGQLTE-----KSDVYSFGIVILELMSG 492
GT ++APE + + KSD++S GI +E+ G
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G VA+K I + + ++EFI E +++ + H L+ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + F++ ++M +G L +++ R Q Q ++ DV + + YL
Sbjct: 75 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQ 125
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N L++ + KV+DFGL++ L+ + + + PE +Y + +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 476 KSDVYSFGIVILELMS 491
KSD+++FG+++ E+ S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 77 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT---YGYLAPE 466
K HRD+ + N L+ KVADFGL++ + G ++ T AG + APE
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPIKWTAPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 77 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 185
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 87
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 88 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 141
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 142 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTY-TAHAGAKFPIKWTAPES 196
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 77 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 130
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 185
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 73 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ L T + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPES 181
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ T T VAVK + + E F+ E ++ ++H L+ L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+++ +FM GSL D + + KQ P+ +A+G+A++ +
Sbjct: 82 EPI------YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 131
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + + K+ADFGLA+ +E + T R + + APE +G
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGSF 189
Query: 474 TEKSDVYSFGIVILELMS-GR 493
T KSDV+SFGI+++E+++ GR
Sbjct: 190 TIKSDVWSFGILLMEIVTYGR 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 80 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 188
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 80 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ L T + + APE
Sbjct: 134 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPES 188
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 76 LGVCT-----REPPFYIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 129
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HRD+ + N L+ KVADFGL++ L T + + APE
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPES 184
Query: 468 ALYGQLTEKSDVYSFGIVILEL 489
Y + + KSDV++FG+++ E+
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 106/215 (49%), Gaps = 36/215 (16%)
Query: 298 QGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIIS--KIRHRNLLSL-----R 350
+G G V+K L + VAVK D + + NE E+ S ++H N+L R
Sbjct: 34 RGRFGCVWKAQLLN-EYVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G V D +L+ F GSL D + + ++W + I +A+GLAYLH
Sbjct: 90 GTSVDVD------LWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHE 139
Query: 411 -------GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR-VAGTYGY 462
G KPAI HRDIKS N+LL + + A +ADFGLA + G+S T GT Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 463 LAPEYALYGQLTEKS------DVYSFGIVILELMS 491
+APE L G + + D+Y+ G+V+ EL S
Sbjct: 200 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++Q IG+GA G+V T VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+R +S E + ++V D M + + L +QL+ + + +GL Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETD-----LYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+L+++ K+ DFGLA+ + H T T Y AP
Sbjct: 160 IHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQITDLDTKGDEEF 331
S + W +++E + F K +G GA S VV G L AVK I KG E
Sbjct: 9 SSSSWKKQAEDIKKI--FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS 66
Query: 332 I-NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA--LTRKQ 388
I NE+ ++ KI+H N+++L S + +LV + G L D I T K
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPN-----HLYLVMQLVSGGELFDRIVEKGFYTEKD 121
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL---DSEMKAKVADFGLAKQS 445
+ +I V + YLH + I HRD+K N+L D E K ++DFGL+K
Sbjct: 122 AS-----TLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-- 171
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
+EG+ + + GT GY+APE ++ D +S G++ L+ G N S L
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 219 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 266
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 267 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 325 GPEVDIWSLGIMVIEMVDG 343
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
+G+G G V++G L G VAVK + D ++ + E EI + + RH N+L
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRD---EQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL- 412
++S + + +L+ + GSL D + LA ++ + A GLA+LH +
Sbjct: 72 MTSRN-SSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIF 126
Query: 413 ----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL----TTRVAGTYGYLA 464
KPAI HRD KS N+L+ S ++ +AD GLA +G +L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMA 185
Query: 465 PEYALYGQLT-------EKSDVYSFGIVILEL 489
PE L Q+ + +D+++FG+V+ E+
Sbjct: 186 PE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ T T VAVK + + E F+ E ++ ++H L+ L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+++ +FM GSL D + + KQ P+ +A+G+A++ +
Sbjct: 255 EPI------YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 304
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + + K+ADFGLA+ + + T R + + APE +G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 474 TEKSDVYSFGIVILELMS-GR 493
T KSDV+SFGI+++E+++ GR
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR 383
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R++++ + ++ + YL
Sbjct: 282 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE 335
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HR++ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 336 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 390
Query: 468 ALYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV++FG+++ E+ +
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 97 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 144
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 145 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 202
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 203 GPEVDIWSLGIMVIEMVDG 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 129/294 (43%), Gaps = 61/294 (20%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISK--IRHRN 345
G + +G G V+K L + VAVK I L K + + +E EI S ++H N
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLMN-DFVAVK-IFPLQDK--QSWQSEREIFSTPGMKHEN 70
Query: 346 LLSL-----RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
LL RG + + +L+ F GSL D++ + + W + +
Sbjct: 71 LLQFIAAEKRGSNLEVE------LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAET 120
Query: 401 VAKGLAYLHY--------GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+++GL+YLH G KP+I HRD KS N+LL S++ A +ADFGLA + G+
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 453 TTR-VAGTYGYLAPEYALYGQLTEKS------DVYSFGIVILELMSGRKVLETSNSSFLL 505
T GT Y+APE L G + + D+Y+ G+V+ EL+S K
Sbjct: 181 DTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCK----------- 228
Query: 506 ITDWAWMLANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIAD 559
A G VDE F E G +E V V +RPTI D
Sbjct: 229 --------AADGPVDEYMLPFEEEIGQHPSLEELQEVV-----VHKKMRPTIKD 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 99 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 146
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 147 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 204
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 205 GPEVDIWSLGIMVIEMVDG 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 88 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 135
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 136 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 193
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 194 GPEVDIWSLGIMVIEMVDG 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ G + T VAVK + T + F+ E ++ ++H L+ L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT- 77
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K + +++ +FM GSL D + + K L P+ +A+G+AY+ +
Sbjct: 78 ----KEEPIYIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKN 129
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ N+L+ + K+ADFGLA+ +E + T R + + APE +G
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGCF 187
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KS+V+SFGI++ E+++ K+
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKI 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGT-----LVAVKQI-TDLDTKGDEEFINEVEIISKIRHR 344
+++ +IG G G VYKG L+ + VA+K + K +F+ E I+ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
N++ L G K K ++ ++M +G+L + + + Q ++ +A G
Sbjct: 107 NIIRLEGVI-----SKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAG 159
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG---TYG 461
+ YL HRD+ + NIL++S + KV+DFGL++ LE T +G
Sbjct: 160 MKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR-VLEDDPEATYTTSGGKIPIR 215
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLETSNSSFLLITDWAWMLANSGKVD 520
+ APE Y + T SDV+SFGIV+ E+M+ G + W L+N +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY--------------WELSNHEVMK 261
Query: 521 EIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIP 571
I D F R ++ + C A RP AD + +L+ I P
Sbjct: 262 AINDGF-RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGD------EEFINEVEIISKIR 342
F NL+G+G+ VY+ ++ G VA+K I D K + NEV+I +++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 343 HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVA 402
H ++L L E +LV + +G + ++ N + K + + + + +
Sbjct: 70 HPSILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQII 122
Query: 403 KGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYG 461
G+ YLH I HRD+ +N+LL M K+ADFGLA Q + + H T + GT
Sbjct: 123 TGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLET 498
Y++PE A +SDV+S G + L+ GR +T
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ G + T VAVK + T + F+ E ++ ++H L+ L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+ +++ ++M GSL D + + K L P+ +A+G+AY+ +
Sbjct: 80 EEP-----IYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKN 130
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ N+L+ + K+ADFGLA+ +E + T R + + APE +G
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGCF 188
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ E+++ K+
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKI 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G +G V+ G T VAVK + D F+ E ++ +++H+ L+ L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+++ ++M +GSL D + LT +L + +A+G+A++
Sbjct: 80 EPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-----DMAAQIAEGMAFIE-- 126
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYAL 469
+ HRD+++ NIL+ + K+ADFGLA+ L + T R + + APE
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 470 YGQLTEKSDVYSFGIVILELMSGRKV 495
YG T KSDV+SFGI++ E+++ ++
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G GVV G + VAVK I + + ++EF E + + K+ H L+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-- 72
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
K ++V +++ +G L +++ + K L Q ++ DV +G+A+L
Sbjct: 73 ---SKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLE---SHQ 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE 475
HRD+ + N L+D ++ KV+DFG+ + L+ Q + + APE Y + +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 476 KSDVYSFGIVILELMS 491
KSDV++FGI++ E+ S
Sbjct: 185 KSDVWAFGILMWEVFS 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 92 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 139
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 140 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 197
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 198 GPEVDIWSLGIMVIEMVDG 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T+ G LVAVK++ + E NEV I+ +H N++ + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+ LH
Sbjct: 142 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ-- 189
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + + GT ++APE
Sbjct: 190 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPY 247
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 248 GPEVDIWSLGIMVIEMVDG 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 6 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 62
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 114
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 115 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 166
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 167 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 5 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 61
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 113
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 114 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 165
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 166 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V T + G VAVK++ + E NEV I+ H N++ + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
D+ ++V +F+ G+L D +++ + +Q+A + L V + L+YLH
Sbjct: 113 VGDE-----LWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH---N 159
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL S+ + K++DFG Q + + + GT ++APE
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ-VSKEVPKRKXLVGTPYWMAPEVISRLPY 218
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 219 GTEVDIWSLGIMVIEMIDG 237
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 13 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 69
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 121
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 122 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 173
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 174 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 9 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 65
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 117
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 118 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEY 169
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 170 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 66
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 118
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 119 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEY 170
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 171 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 112
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 113 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 164
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 112
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 113 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 164
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 112
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 113 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEY 164
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 12 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 68
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 120
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 121 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 172
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 173 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 217
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 66
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 118
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 119 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEX 170
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 171 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVE 336
W E E+ + T ++ +G G G V+ G T VAVK + D F+ E
Sbjct: 14 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 70
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWP 392
++ +++H+ L+ L +++ ++M +GSL D + LT +L
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLL-- 122
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ +A+G+A++ + HRD+++ NIL+ + K+ADFGLA+ L +
Sbjct: 123 ---DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEY 174
Query: 453 TTRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKV 495
T R + + APE YG T KSDV+SFGI++ E+++ ++
Sbjct: 175 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 219
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 321 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 374
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HR++ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 375 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 429
Query: 468 ALYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV++FG+++ E+ +
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 17/186 (9%)
Query: 312 GTLVAVKQITDLDTKGDE--EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK + ++ G+ + E+EI+ + H N++ +G C ++ G L+ +
Sbjct: 38 GEQVAVKSLKP-ESGGNHIADLKKEIEILRNLYHENIVKYKGICT---EDGGNGIKLIME 93
Query: 370 FMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLD 429
F+PSGSL +++ + ++ Q+ K + + KG+ YL G + + HRD+ + N+L++
Sbjct: 94 FLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVE 148
Query: 430 SEMKAKVADFGLAKQSLEGQSHLTT----RVAGTYGYLAPEYALYGQLTEKSDVYSFGIV 485
SE + K+ DFGL K ++E T R + + Y APE + + SDV+SFG+
Sbjct: 149 SEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVT 206
Query: 486 ILELMS 491
+ EL++
Sbjct: 207 LHELLT 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 291 SQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+ K+ +G G G VY+G + +L VAVK + + DT EEF+ E ++ +I+H NL+ L
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 278
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
G C + +++ +FM G+L D++ R+++ + ++ + YL
Sbjct: 279 LGVCT-----REPPFYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE 332
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEY 467
K HR++ + N L+ KVADFGL++ + G ++ T + + APE
Sbjct: 333 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPES 387
Query: 468 ALYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV++FG+++ E+ +
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 125
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 180
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 125
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 180
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 17/186 (9%)
Query: 312 GTLVAVKQITDLDTKGDE--EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK + ++ G+ + E+EI+ + H N++ +G C ++ G L+ +
Sbjct: 50 GEQVAVKSLKP-ESGGNHIADLKKEIEILRNLYHENIVKYKGICT---EDGGNGIKLIME 105
Query: 370 FMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLD 429
F+PSGSL +++ + ++ Q+ K + + KG+ YL G + + HRD+ + N+L++
Sbjct: 106 FLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVE 160
Query: 430 SEMKAKVADFGLAKQSLEGQSHLTT----RVAGTYGYLAPEYALYGQLTEKSDVYSFGIV 485
SE + K+ DFGL K ++E T R + + Y APE + + SDV+SFG+
Sbjct: 161 SEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVT 218
Query: 486 ILELMS 491
+ EL++
Sbjct: 219 LHELLT 224
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 26/201 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ T T VAVK + + E F+ E ++ ++H L+ L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+++ +FM GSL D + + KQ P+ +A+G+A++ +
Sbjct: 249 EPI------YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 298
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + + K+ADFGLA RV + + APE +G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLA------------RVGAKFPIKWTAPEAINFGSF 346
Query: 474 TEKSDVYSFGIVILELMS-GR 493
T KSDV+SFGI+++E+++ GR
Sbjct: 347 TIKSDVWSFGILLMEIVTYGR 367
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 183
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 182
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 35/292 (11%)
Query: 271 PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDT 325
PN F + ELD + + +IG G G V G L+ VA+K +
Sbjct: 29 PNRAVHQFAK-ELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 326 KGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
K +F+ E I+ + H N++ L G +GK +V +FM +G+L +A
Sbjct: 86 KQRRDFLCEASIMGQFDHPNVVHLEGVVT-----RGKPVMIVIEFMENGAL-----DAFL 135
Query: 386 RK---QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA 442
RK Q Q ++ +A G+ YL HRD+ + NIL++S + KV+DFGL+
Sbjct: 136 RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Query: 443 KQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLET 498
+ + + T G + APE Y + T SDV+S+GIV+ E+MS R +
Sbjct: 193 RVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
Query: 499 SNSSFLLITDWAWMLAN-----SGKVDEIFDEFIREEGSRAVMERFVRVGIL 545
SN + + + L +G + D + +E R E+ VGIL
Sbjct: 253 SNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQI--VGIL 302
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 181
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 134
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 135 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 189
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 182
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 118
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 173
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 182
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 130
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 131 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 185
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 181
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 186
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 182
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 295 LIGQGASGVVYKGTL--EDGT--LVAVK--QITDLDTKGDEEFINEVEIISKIRHRNLLS 348
++G+G G V +G L EDGT VAVK ++ + + EEF++E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR---KQLAWPQRKKIILDVAKGL 405
L G C+ + + ++ FM G L ++ + K + K ++D+A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT-YGYLA 464
YL HRD+ + N +L +M VADFGL+K+ G + R+A ++A
Sbjct: 161 EYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 465 PEYALYGQLTEKSDVYSFGIVILEL 489
E T KSDV++FG+ + E+
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 102 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 149
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 150 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 204
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 293 KNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
K +G+GA G V+ +D LVAVK + D ++F E E+++ ++H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRK------QLAWPQRKK 396
+ G CV D +V+++M G L H +A+ +L Q
Sbjct: 78 VKFYGVCVEGDP-----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQ 449
I +A G+ YL HRD+ + N L+ + K+ DFG+++ + G
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ L R ++ PE +Y + T +SDV+S G+V+ E+ +
Sbjct: 190 TMLPIR------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ G T VAVK + D F+ E ++ +++H+ L+ L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+++ ++M +GSL D + + +L + + +A+G+A++ +
Sbjct: 75 EPI------YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERN 124
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HRD+++ NIL+ + K+ADFGLA+ L + T R + + APE YG
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ E+++ ++
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRI 204
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFM 371
G LVAVKQ+ +F E++I+ + ++ RG VS + R LV +++
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRQSLR-LVMEYL 96
Query: 372 PSGSLGDHISNALTRKQLAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
PSG L D + R + +++L + KG+ YL G + + HRD+ + NIL+
Sbjct: 97 PSGCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILV 148
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVI 486
+SE K+ADFGLAK + + R G + APE + +SDV+SFG+V+
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 208
Query: 487 LELMS 491
EL +
Sbjct: 209 YELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFM 371
G LVAVKQ+ +F E++I+ + ++ RG VS + R LV +++
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRQSLR-LVMEYL 108
Query: 372 PSGSLGDHISNALTRKQLAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
PSG L D + R + +++L + KG+ YL G + + HRD+ + NIL+
Sbjct: 109 PSGCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILV 160
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVI 486
+SE K+ADFGLAK + + R G + APE + +SDV+SFG+V+
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 487 LELMS 491
EL +
Sbjct: 221 YELFT 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L+ + + + + +GL
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 38/232 (16%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDL--DTKGDEEFINEVEIISKIR-HRNLLSLRG 351
+G+GA G+V+K G +VAVK+I D ++ + E+ I++++ H N+++L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKK-IILDVAKGLAYLHY 410
+ +D + +LV+D+M + +A+ R + P K+ ++ + K + YLH
Sbjct: 77 VLRADND---RDVYLVFDYMETDL------HAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK--------------------QSLEGQS 450
G + HRD+K +NILL++E KVADFGL++ ++ +
Sbjct: 128 G---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 451 HLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNS 501
+ T T Y APE L + T+ D++S G ++ E++ G+ + S++
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFM 371
G LVAVKQ+ +F E++I+ + ++ RG VS + R LV +++
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRQSLR-LVMEYL 95
Query: 372 PSGSLGDHISNALTRKQLAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
PSG L D + R + +++L + KG+ YL G + + HRD+ + NIL+
Sbjct: 96 PSGCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILV 147
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVI 486
+SE K+ADFGLAK + + R G + APE + +SDV+SFG+V+
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 207
Query: 487 LELMS 491
EL +
Sbjct: 208 YELFT 212
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L+ + + + + +GL
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 51/251 (20%)
Query: 266 KDSVLPNSGAKWFRESELDQATGGFSQ----KNLIGQGASGVVYKGTLEDGTLVAVKQIT 321
+D+ LP S +T GF + K ++G+G S VV + + +I
Sbjct: 2 RDAALPGS-----------HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII 50
Query: 322 DLDTKGD----------EEFINEVEIISKIR-HRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
D+ G E + EV+I+ K+ H N++ L+ E FLV+D
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-----ETNTFFFLVFDL 105
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
M G L D+++ +T L+ + +KI+ + + + LH K I HRD+K NILLD
Sbjct: 106 MKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDD 159
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE---------YALYGQLTEKSDVYS 481
+M K+ DFG + Q G+ V GT YLAPE + YG+ + D++S
Sbjct: 160 DMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWS 214
Query: 482 FGIVILELMSG 492
G+++ L++G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 312 GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFM 371
G LVAVKQ+ +F E++I+ + ++ RG VS + + R LV +++
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRPELR-LVMEYL 92
Query: 372 PSGSLGDHISNALTRKQLAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
PSG L D + R + +++L + KG+ YL G + + HRD+ + NIL+
Sbjct: 93 PSGCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILV 144
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVI 486
+SE K+ADFGLAK + R G + APE + +SDV+SFG+V+
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 204
Query: 487 LELMS 491
EL +
Sbjct: 205 YELFT 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 40/225 (17%)
Query: 293 KNLIGQGASGVVYKGT------LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
K +G+GA G V+ +D LVAVK + D ++F E E+++ ++H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNAL---------TRKQLAWPQ 393
+ G C D +V+++M G L H +A+ + +L Q
Sbjct: 80 VKFYGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SL 446
I +A G+ YL HRD+ + N L+ + + K+ DFG+++ +
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 447 EGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
G + L R ++ PE +Y + T +SDV+SFG+++ E+ +
Sbjct: 192 GGHTMLPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGLA+ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 51/251 (20%)
Query: 266 KDSVLPNSGAKWFRESELDQATGGFSQ----KNLIGQGASGVVYKGTLEDGTLVAVKQIT 321
+D+ LP S +T GF + K ++G+G S VV + + +I
Sbjct: 2 RDAALPGS-----------HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII 50
Query: 322 DLDTKGD----------EEFINEVEIISKIR-HRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
D+ G E + EV+I+ K+ H N++ L+ E FLV+D
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-----ETNTFFFLVFDL 105
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
M G L D+++ +T L+ + +KI+ + + + LH K I HRD+K NILLD
Sbjct: 106 MKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDD 159
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE---------YALYGQLTEKSDVYS 481
+M K+ DFG + Q G+ V GT YLAPE + YG+ + D++S
Sbjct: 160 DMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWS 214
Query: 482 FGIVILELMSG 492
G+++ L++G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 146 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 121
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+A+G+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 122 QIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 176
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 138 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 145 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 138 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 145
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 146 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 137 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ + RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K +LV M G + L + L+ + + +GL
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLM-----GADLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 183
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 22/179 (12%)
Query: 317 VKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL 376
VKQ TD E + EV+++ ++ H N++ L ++KG +LV + G L
Sbjct: 64 VKQKTD-----KESLLREVQLLKQLDHPNIMKLYEFF----EDKG-YFYLVGEVYTGGEL 113
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--- 433
D I ++RK+ + +II V G+ Y+H K I HRD+K N+LL+S+ K
Sbjct: 114 FDEI---ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDAN 167
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ DFGL+ E + ++ GT Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 168 IRIIDFGLSTH-FEASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQITDLDT-KGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V +G L+ + VA+K + T + EF++E I+ + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G +S ++ +FM +G+L + L Q Q ++ +A G+ Y
Sbjct: 81 RLEGVVTNS-----MPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRY 133
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG-----Y 462
L + + HRD+ + NIL++S + KV+DFGL++ LE S T + G +
Sbjct: 134 LA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKIPIRW 189
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMS 491
APE + + T SD +S+GIV+ E+MS
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 22/179 (12%)
Query: 317 VKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL 376
VKQ TD E + EV+++ ++ H N++ L ++KG +LV + G L
Sbjct: 87 VKQKTD-----KESLLREVQLLKQLDHPNIMKLYEFF----EDKG-YFYLVGEVYTGGEL 136
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--- 433
D I ++RK+ + +II V G+ Y+H K I HRD+K N+LL+S+ K
Sbjct: 137 FDEI---ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDAN 190
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ DFGL+ E + ++ Y Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 191 IRIIDFGLSTH-FEASKKMKDKIGTAY-YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 22/179 (12%)
Query: 317 VKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL 376
VKQ TD E + EV+++ ++ H N++ L ++KG +LV + G L
Sbjct: 88 VKQKTD-----KESLLREVQLLKQLDHPNIMKLYEFF----EDKG-YFYLVGEVYTGGEL 137
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--- 433
D I ++RK+ + +II V G+ Y+H K I HRD+K N+LL+S+ K
Sbjct: 138 FDEI---ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDAN 191
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ DFGL+ E + ++ Y Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 192 IRIIDFGLSTH-FEASKKMKDKIGTAY-YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 102 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 151
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 152 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 256
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 257 EGARDLISRLLK 268
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 278 FRESELDQATGGFSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITD-LDTKGDEEF 331
+E+EL + ++G GA G VYKG + DG VA+K + + K ++E
Sbjct: 14 LKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI 66
Query: 332 INEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAW 391
++E +++ + + L G C++S + LV MP G L DH+ R +L
Sbjct: 67 LDEAYVMAGVGSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRE--NRGRLGS 118
Query: 392 PQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQS 450
+ +AKG++YL + HRD+ + N+L+ S K+ DFGLA+ ++
Sbjct: 119 QDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 451 HLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ ++A E L + T +SDV+S+G+ + ELM+
Sbjct: 176 YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G + + + + I ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTATYITELANALSYCH-- 130
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 235
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 236 EGARDLISRLLK 247
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 295 LIGQGASGVVYK---GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
++G+G+ G V K + V V K + EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
E ++V + G L D I + RK+ + +II V G+ Y+H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
K I HRD+K NILL+S+ K K+ DFGL+ + + + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 34/220 (15%)
Query: 293 KNLIGQGASGVVYKGTLEDGTL---VAVKQITDLDTKGDE-EFINEVEIISKI-RHRNLL 347
+++IG+G G V K ++ L A+K++ + +K D +F E+E++ K+ H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDH--------------ISNALTRKQLAWPQ 393
+L G C E +L ++ P G+L D I+N+ T L+ Q
Sbjct: 80 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS-TASTLSSQQ 133
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
DVA+G+ YL + HRD+ + NIL+ AK+ADFGL++ GQ
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 186
Query: 454 TRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 181
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDGTLVAVK-QITDL----DTKGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G V + I +L K ++E ++E +++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 111 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 158
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 159 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 213
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVS 355
+G G G V+ G T VAVK + D F+ E ++ +++H+ L+ L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 356 SDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPA 415
+++ ++M +GSL D + + +L + + +A+G+A++ +
Sbjct: 76 EPI------YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERN 125
Query: 416 IYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYALYGQL 473
HR++++ NIL+ + K+ADFGLA+ L + T R + + APE YG
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 474 TEKSDVYSFGIVILELMSGRKV 495
T KSDV+SFGI++ E+++ ++
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRI 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 181
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++ GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 186
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + ++ T L+ G + + EVEI S +RH N+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI-ILDVAKGLAYLHY 410
R +L+ ++ P G++ + L+R QR I ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLGTVYRELQK-LSRFD---EQRTATYITELANALSYCH- 129
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIR 528
EK D++S G++ E + G E T ++ I+ +V+ F +F+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----------RVEFTFPDFV- 233
Query: 529 EEGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 TEGARDLISRLLK 246
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 34/220 (15%)
Query: 293 KNLIGQGASGVVYKGTLEDGTL---VAVKQITDLDTKGDE-EFINEVEIISKI-RHRNLL 347
+++IG+G G V K ++ L A+K++ + +K D +F E+E++ K+ H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDH--------------ISNALTRKQLAWPQ 393
+L G C E +L ++ P G+L D I+N+ T L+ Q
Sbjct: 90 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS-TASTLSSQQ 143
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
DVA+G+ YL + HRD+ + NIL+ AK+ADFGL++ GQ
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 196
Query: 454 TRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 22/179 (12%)
Query: 317 VKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL 376
VKQ TD E + EV+++ ++ H N++ L ++KG +LV + G L
Sbjct: 70 VKQKTD-----KESLLREVQLLKQLDHPNIMKLYEFF----EDKG-YFYLVGEVYTGGEL 119
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--- 433
D I ++RK+ + +II V G+ Y+H K I HRD+K N+LL+S+ K
Sbjct: 120 FDEI---ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDAN 173
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ DFGL+ E + ++ GT Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 174 IRIIDFGLSTH-FEASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQITDLDT-KGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V +G L+ + VA+K + T + EF++E I+ + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G +S ++ +FM +G+L + L Q Q ++ +A G+ Y
Sbjct: 79 RLEGVVTNS-----MPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRY 131
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG-----Y 462
L + + HRD+ + NIL++S + KV+DFGL++ LE S T + G +
Sbjct: 132 LA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTYTSSLGGKIPIRW 187
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMS 491
APE + + T SD +S+GIV+ E+MS
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 295 LIGQGASGVVYK---GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
++G+G+ G V K + V V K + EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
E ++V + G L D I + RK+ + +II V G+ Y+H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
K I HRD+K NILL+S+ K K+ DFGL+ + + + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 295 LIGQGASGVVYK---GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
++G+G+ G V K + V V K + EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
E ++V + G L D I + RK+ + +II V G+ Y+H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
K I HRD+K NILL+S+ K K+ DFGL+ + + + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++ GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 179
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 181
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 130
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 235
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 236 EGARDLISRLLK 247
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++G GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFG AK L G G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEGG 186
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 12 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 70 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 119
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 120 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
Query: 510 AWML 513
+ L
Sbjct: 237 GYRL 240
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 93 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 142
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 143 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 247
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 248 EGARDLISRLLK 259
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDG----TLVAVKQITDLDT-KGDEEFINEVEIISKIRH 343
F + ++ GA G VYKG + +G VA+K++ + + K ++E ++E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD----HISNALTRKQLAWPQRKKIIL 399
++ L G C++S + L+ MP G L D H N ++ L W +
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG- 458
+AKG+ YL + HRD+ + N+L+ + K+ DFGLAK L G G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEGG 186
Query: 459 --TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 130
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 235
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 236 EGARDLISRLLK 247
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 29 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 87 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 136
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG--QSH 451
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ LE ++
Sbjct: 137 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSR-VLEDDPEAA 192
Query: 452 LTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITD 508
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 252
Query: 509 WAWML 513
+ L
Sbjct: 253 EGYRL 257
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 126
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 231
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 232 EGARDLISRLLK 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+++I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 264 SFKDSVLPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQ 319
+F+D PN + F + E+D + Q +IG G G V G L+ VA+K
Sbjct: 15 TFED---PNEAVREFAK-EIDISCVKIEQ--VIGAGEFGEVCSGHLKLPGKREIFVAIKT 68
Query: 320 I-TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD 378
+ + K +F++E I+ + H N++ L G K ++ +FM +GSL
Sbjct: 69 LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-----KSTPVMIITEFMENGSLDS 123
Query: 379 HISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ Q Q ++ +A G+ YL HRD+ + NIL++S + KV+D
Sbjct: 124 FLRQ--NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSD 178
Query: 439 FGLAKQSLEGQSHLTTRVAGTYG-----YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
FGL++ LE + T + G + APE Y + T SDV+S+GIV+ E+MS
Sbjct: 179 FGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Query: 272 NSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQI--TDLDTKGD 328
+SG E+ Q+ + L+G+G+ G+V K +D G +VA+K+ +D D
Sbjct: 9 SSGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK 68
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
+ + E++++ ++RH NL++L C +K KR +LV++F+ L D L
Sbjct: 69 KIAMREIKLLKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDL---ELFPNG 120
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L + +K + + G+ + H I HRDIK NIL+ K+ DFG A+ +L
Sbjct: 121 LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAA 176
Query: 449 QSHLTTRVAGTYGYLAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVL 496
+ T Y APE + YG+ DV++ G ++ E+ G +
Sbjct: 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLF 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 289 GFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD----------EEFINEVEII 338
+ K ++G+G S VV + + +I D+ G E + EV+I+
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 339 SKIR-HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
K+ H N++ L+ E FLV+D M G L D+++ +T L+ + +KI
Sbjct: 65 RKVSGHPNIIQLKDTY-----ETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKI 116
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ + + + LH K I HRD+K NILLD +M K+ DFG + Q G+ V
Sbjct: 117 MRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVC 171
Query: 458 GTYGYLAPE---------YALYGQLTEKSDVYSFGIVILELMSG 492
GT YLAPE + YG+ + D++S G+++ L++G
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ +
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 454 TRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
T G + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 130
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 235
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 236 EGARDLISRLLK 247
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 39 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 97 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 146
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 147 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 203
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 204 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 263
Query: 510 AWML 513
+ L
Sbjct: 264 GYRL 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 285 QATGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQI-TDLDTKGDEEFINEVEIISKIR 342
Q G + K +G G G V + +D G VA+KQ +L K E + E++I+ K+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 343 HRNLLSLRGCCVSSDDEK---GKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
H N++S R V +K L ++ G L +++ L + ++
Sbjct: 71 HPNVVSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLD---SEMKAKVADFGLAKQSLEGQSHLTTRV 456
D++ L YLH I HRD+K NI+L + K+ D G AK+ +G+ L T
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEF 183
Query: 457 AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GT YLAPE + T D +SFG + E ++G
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRN 345
++ + IG+GA G+V Y + VA+K+I+ + + + + E++I+ RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ + + E+ K ++V D M + + L + L+ + + +GL
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYL 463
Y+H + HRD+K +N+LL++ K+ DFGLA+ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + KS D++S G ++ E++S R +
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+G+GA G V+ +D LVAVK + + ++F E E+++ ++H++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLG----DHISNA--------LTRKQLAWPQRKKI 397
G C +G+ +V+++M G L H +A + L Q +
Sbjct: 109 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQS 450
VA G+ YL GL HRD+ + N L+ + K+ DFG+++ + G++
Sbjct: 164 ASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 451 HLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L R ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 221 MLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+G+GA G V+ +D LVAVK + + ++F E E+++ ++H++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLG----DHISNA--------LTRKQLAWPQRKKI 397
G C +G+ +V+++M G L H +A + L Q +
Sbjct: 86 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQS 450
VA G+ YL GL HRD+ + N L+ + K+ DFG+++ + G++
Sbjct: 141 ASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 451 HLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L R ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 198 MLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 285 QATGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQI-TDLDTKGDEEFINEVEIISKIR 342
Q G + K +G G G V + +D G VA+KQ +L K E + E++I+ K+
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 343 HRNLLSLRGCCVSSDDEK---GKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
H N++S R V +K L ++ G L +++ L + ++
Sbjct: 72 HPNVVSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLD---SEMKAKVADFGLAKQSLEGQSHLTTRV 456
D++ L YLH I HRD+K NI+L + K+ D G AK+ +G+ L T
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEF 184
Query: 457 AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GT YLAPE + T D +SFG + E ++G
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 129
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 130 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 234
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 235 EGARDLISRLLK 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 75 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 124
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 125 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 229
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 230 EGARDLISRLLK 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+G+GA G V+ +D LVAVK + + ++F E E+++ ++H++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLG----DHISNA--------LTRKQLAWPQRKKI 397
G C +G+ +V+++M G L H +A + L Q +
Sbjct: 80 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQS 450
VA G+ YL GL HRD+ + N L+ + K+ DFG+++ + G++
Sbjct: 135 ASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 451 HLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L R ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 192 MLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V ++M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL + + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY ++ + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
S R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YFHDST-----RVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 126 -SKKVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 126
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S S T ++GT YL PE
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SCHAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 231
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 232 EGARDLISRLLK 243
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 29/212 (13%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE--EFINEVEIISKIRH 343
TGGF++ L A ++ G +VA+K I D +T G + E+E + +RH
Sbjct: 19 GTGGFAKVKL----ACHIL------TGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRH 67
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
+++ C + E + F+V ++ P G L D+I +++ +L+ + + + +
Sbjct: 68 QHI-----CQLYHVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFRQIVS 119
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGL-AKQSLEGQSHLTTRVAGTYGY 462
+AY+H HRD+K N+L D K K+ DFGL AK HL T G+ Y
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAY 175
Query: 463 LAPEYALYGQ--LTEKSDVYSFGIVILELMSG 492
APE + G+ L ++DV+S GI++ LM G
Sbjct: 176 AAPE-LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 34/220 (15%)
Query: 293 KNLIGQGASGVVYKGTLEDGTL---VAVKQITDLDTKGDE-EFINEVEIISKI-RHRNLL 347
+++IG+G G V K ++ L A+K++ + +K D +F E+E++ K+ H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDH--------------ISNALTRKQLAWPQ 393
+L G C E +L ++ P G+L D I+N+ T L+ Q
Sbjct: 87 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS-TASTLSSQQ 140
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
DVA+G+ YL + HR++ + NIL+ AK+ADFGL++ GQ
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV 193
Query: 454 TRVAGTYG--YLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T Y AP
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 73 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 122
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S T + GT YL PE
Sbjct: 123 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 227
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 228 EGARDLISRLLK 239
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 13/212 (6%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLL 347
++ + IG+GA G+V + VA+K+I+ + + + + E++I+ + RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
+ + E+ K ++V D M + + L + L+ + + +GL Y
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAP 465
+H + HRD+K +N+LL++ K+ DFGLA+ + H T Y AP
Sbjct: 145 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + KS D++S G ++ E++S R +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 284 DQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFIN-EVEIISKIR 342
+Q ++ +IG G+ GVV++ L + VA+K++ D+ F N E++I+ ++
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVK 90
Query: 343 HRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
H N++ L+ S+ D+K + LV +++P A ++ + K + +
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTY 460
+ LAY+H I HRDIK N+LLD K+ DFG AK + G+ +++ + Y
Sbjct: 151 LRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRY 206
Query: 461 GYLAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVL 496
Y APE ++G T D++S G V+ ELM G+ +
Sbjct: 207 -YRAPEL-IFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF---INEVEIISKIRHRN 345
FS IG G+ G VY + + +VA+K+++ + +E++ I EV + K+RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
+ RGC + + +LV ++ GS D + + +K L + + +GL
Sbjct: 116 TIQYRGCYL-----REHTAWLVMEYC-LGSASDLLE--VHKKPLQEVEIAAVTHGALQGL 167
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
AYLH + HRD+K+ NILL K+ DFG A S+ + GT ++AP
Sbjct: 168 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA--SIMAPA---NXFVGTPYWMAP 219
Query: 466 EYALY---GQLTEKSDVYSFGIVILELMSGRKVLETSN--SSFLLITDWAWMLANSGKVD 520
E L GQ K DV+S GI +EL + L N S+ I SG
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWS 279
Query: 521 EIFDEFI 527
E F F+
Sbjct: 280 EYFRNFV 286
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 33/228 (14%)
Query: 275 AKWFRESELDQATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDL--DTKGDEEF 331
A+ F+E+EL + ++G G G V+KG + +G + + + D G + F
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 332 ---INEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
+ + I + H +++ L G C S + LV ++P GSL DH+ R
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQ--HRGA 111
Query: 389 LAWPQRKKIILD----VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ 444
L PQ ++L+ +AKG+ YL + + HR++ + N+LL S + +VADFG+A
Sbjct: 112 LG-PQ---LLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 445 SLEGQSHLTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L A T ++A E +G+ T +SDV+S+G+ + ELM+
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 78 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 127
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+A+FG S+ S T + GT YL PE
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 232
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 233 EGARDLISRLLK 244
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 33/228 (14%)
Query: 275 AKWFRESELDQATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDL--DTKGDEEF 331
A+ F+E+EL + ++G G G V+KG + +G + + + D G + F
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 332 ---INEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
+ + I + H +++ L G C S + LV ++P GSL DH+ R
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQ--HRGA 129
Query: 389 LAWPQRKKIILD----VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ 444
L PQ ++L+ +AKG+ YL + + HR++ + N+LL S + +VADFG+A
Sbjct: 130 LG-PQ---LLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 445 SLEGQSHLTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L A T ++A E +G+ T +SDV+S+G+ + ELM+
Sbjct: 183 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G + + + + I ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPRGEVYKELQKL---SKFDEQRTATYITELANALSYCH-- 130
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 235
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 236 EGARDLISRLLK 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA+G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 29/245 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 12 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V + M +GSL ++ RK Q Q
Sbjct: 70 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQ 119
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG--QSH 451
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ LE ++
Sbjct: 120 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSR-VLEDDPEAA 175
Query: 452 LTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITD 508
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
Query: 509 WAWML 513
+ L
Sbjct: 236 EGYRL 240
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 78 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 127
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 232
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 233 EGARDLISRLLK 244
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
+G+G G V++G+ + G VAVK + D K + E E+ + + RH N+L
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 100
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL- 412
++S + +L+ + GSL D+ L L +I+L +A GLA+LH +
Sbjct: 101 MTSR-HSSTQLWLITHYHEMGSLYDY----LQLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 413 ----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL----TTRVAGTYGYLA 464
KPAI HRD+KS NIL+ + +AD GLA + + L RV GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 214
Query: 465 PE----------YALYGQLTEKSDVYSFGIVILEL 489
PE + Y ++ D+++FG+V+ E+
Sbjct: 215 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEV 245
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 290 FSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF---INEVEIISKIRHRN 345
FS IG G+ G VY + + +VA+K+++ + +E++ I EV + K+RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
+ RGC + + +LV ++ GS D + + +K L + + +GL
Sbjct: 77 TIQYRGCYL-----REHTAWLVMEYC-LGSASDLLE--VHKKPLQEVEIAAVTHGALQGL 128
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
AYLH + HRD+K+ NILL K+ DFG A S+ + GT ++AP
Sbjct: 129 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA--SIMAPA---NXFVGTPYWMAP 180
Query: 466 EYALY---GQLTEKSDVYSFGIVILELMSGRKVLETSN--SSFLLITDWAWMLANSGKVD 520
E L GQ K DV+S GI +EL + L N S+ I SG
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWS 240
Query: 521 EIFDEFI 527
E F F+
Sbjct: 241 EYFRNFV 247
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
+G+G G V++G+ + G VAVK + D K + E E+ + + RH N+L
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL- 412
++S + +L+ + GSL D+ L L +I+L +A GLA+LH +
Sbjct: 72 MTSR-HSSTQLWLITHYHEMGSLYDY----LQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 413 ----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL----TTRVAGTYGYLA 464
KPAI HRD+KS NIL+ + +AD GLA + + L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 465 PE----------YALYGQLTEKSDVYSFGIVILEL 489
PE + Y ++ D+++FG+V+ E+
Sbjct: 186 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEV 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V + M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 33/253 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI-ILDVAKGLAYLHY 410
R +L+ ++ P G+ + L + QR I ++A L+Y H
Sbjct: 102 YF-----HDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCH- 151
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 152 --SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIR 528
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV- 255
Query: 529 EEGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 256 TEGARDLISRLLK 268
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
+G+G G V++G+ + G VAVK + D K + E E+ + + RH N+L
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL- 412
++S + +L+ + GSL D+ L L +I+L +A GLA+LH +
Sbjct: 72 MTSR-HSSTQLWLITHYHEMGSLYDY----LQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 413 ----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL----TTRVAGTYGYLA 464
KPAI HRD+KS NIL+ + +AD GLA + + L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 465 PE----------YALYGQLTEKSDVYSFGIVILEL 489
PE + Y ++ D+++FG+V+ E+
Sbjct: 186 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEV 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+A+FG S+ S T + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 33/253 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + ++ T L+ G + + EVEI S +RH N+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI-ILDVAKGLAYLHY 410
R +L+ ++ P G++ + L+R QR I ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLGTVYRELQK-LSRFD---EQRTATYITELANALSYCH- 129
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIR 528
EK D++S G++ E + G E T ++ I+ +V+ F +F+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----------RVEFTFPDFV- 233
Query: 529 EEGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 TEGARDLISRLLK 246
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 282 ELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVE 336
ELD S ++G G G V G L+ VA+K + K +F+ E
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 337 IISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQ 393
I+ + H N++ L G K K +V + M +GSL ++ RK Q Q
Sbjct: 99 IMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQ 148
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
++ +A G+ YL HRD+ + NIL++S + KV+DFGL++ + ++
Sbjct: 149 LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 205
Query: 453 TTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFLLITDW 509
TTR + +PE Y + T SDV+S+GIV+ E+MS R E SN + D
Sbjct: 206 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
Query: 510 AWML 513
+ L
Sbjct: 266 GYRL 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 244
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 245 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PS 293
Query: 573 LPE 575
PE
Sbjct: 294 FPE 296
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 126
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 231
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 232 EGARDLISRLLK 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 244
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 245 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PS 293
Query: 573 LPE 575
PE
Sbjct: 294 FPE 296
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
+G GA G VYK E G L A K I + E++I E+EI++ H ++ L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +++ +F P G++ D I L R L PQ + + + + L +LH
Sbjct: 79 HDG-----KLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SK 128
Query: 415 AIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLT 474
I HRD+K+ N+L+ E ++ADFG++ ++L+ + + GT ++APE + +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 187
Query: 475 E-----KSDVYSFGIVILEL 489
+ K+D++S GI ++E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 125
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 230
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 231 EGARDLISRLLK 242
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 53/233 (22%)
Query: 296 IGQGASGVVYKG------TLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRHRNL 346
IG+GA G V++ E T+VAVK + + D + D F E ++++ + N+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD--FQREAALMAEFDNPNI 112
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------------SNALTRKQLAWP- 392
+ L G C GK L++++M G L + + S+ TR +++ P
Sbjct: 113 VKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 393 -------QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ- 444
++ I VA G+AYL + HRD+ + N L+ M K+ADFGL++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 445 ------SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+G + R ++ PE Y + T +SDV+++G+V+ E+ S
Sbjct: 225 YSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 42/223 (18%)
Query: 295 LIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEI--ISKIRHRNLLSLRGC 352
LIG+G G VYKG+L D VAVK + + + FINE I + + H N+
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARF--- 72
Query: 353 CVSSDDE---KGKRRFL-VYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+ D+ G+ +L V ++ P+GSL ++S + W ++ V +GLAYL
Sbjct: 73 -IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 409 HYGL------KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG--------QSHLTT 454
H L KPAI HRD+ S N+L+ ++ ++DFGL+ + L G + +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR-LTGNRLVRPGEEDNAAI 186
Query: 455 RVAGTYGYLAPEYALYGQLT--------EKSDVYSFGIVILEL 489
GT Y+APE L G + ++ D+Y+ G++ E+
Sbjct: 187 SEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 82 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 194 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 241
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 242 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PS 290
Query: 573 LPE 575
PE
Sbjct: 291 FPE 293
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A F E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 60
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 115
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 116 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 172
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 173 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 262 VRSFKDSVL---PNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLE----DGTL 314
VR+F D PN + F + E+D + + +IG G G V G L+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAK-EIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREIC 59
Query: 315 VAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPS 373
VA+K + K +F++E I+ + H N++ L G K K ++ ++M +
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KCKPVMIITEYMEN 114
Query: 374 GSLGDHISNALTRK---QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
GSL +A RK + Q ++ + G+ YL + HRD+ + NIL++S
Sbjct: 115 GSL-----DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNS 166
Query: 431 EMKAKVADFGLAKQ-SLEGQSHLTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFGIVILE 488
+ KV+DFG+++ + ++ TTR + APE Y + T SDV+S+GIV+ E
Sbjct: 167 NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 226
Query: 489 LMS 491
+MS
Sbjct: 227 VMS 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 244
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 245 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PS 293
Query: 573 LPE 575
PE
Sbjct: 294 FPE 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
+G GA G VYK E G L A K I + E++I E+EI++ H ++ L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +++ +F P G++ D I L R L PQ + + + + L +LH
Sbjct: 87 HDG-----KLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SK 136
Query: 415 AIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLT 474
I HRD+K+ N+L+ E ++ADFG++ ++L+ + + GT ++APE + +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 195
Query: 475 E-----KSDVYSFGIVILEL 489
+ K+D++S GI ++E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 64
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 71 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 122
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 123 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTL-EDGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRN 345
F ++G+G+ G V + E G L AVK + D+ + D E + E I+S R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
L+ CC + D R F V +F+ G L HI + ++ + + ++ L
Sbjct: 85 FLTQLFCCFQTPD----RLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISAL 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
+LH I +RD+K N+LLD E K+ADFG+ K+ + T GT Y+AP
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI-CNGVTTATFCGTPDYIAP 193
Query: 466 EY---ALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
E LYG D ++ G+++ E++ G E N L
Sbjct: 194 EILQEMLYGPAV---DWWAMGVLLYEMLCGHAPFEAENEDDLF 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 244
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 245 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PS 293
Query: 573 LPE 575
PE
Sbjct: 294 FPE 296
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 69
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 63
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 89
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG+G++G+V G VAVK + + E NEV I+ +H N++ + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNA-LTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
G+ +++ +F+ G+L D +S L +Q+A + V + LAYLH
Sbjct: 113 V-----GEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH---A 159
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQL 473
+ HRDIKS +ILL + + K++DFG Q + + GT ++APE
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ-ISKDVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 474 TEKSDVYSFGIVILELMSG 492
+ D++S GI+++E++ G
Sbjct: 219 ATEVDIWSLGIMVIEMVDG 237
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 66
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V++G G VAVK + ++ + + E EI + RH N+L G
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL---GFI 102
Query: 354 VSSDDEKGK--RRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
+ + + G + +LV D+ GSL D+ L R + K+ L A GLA+LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDY----LNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 412 L-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL---TTRVAGTYGYL 463
+ KPAI HRD+KS NIL+ +AD GLA + + GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 464 APEY------ALYGQLTEKSDVYSFGIVILEL 489
APE + + +++D+Y+ G+V E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ L+ G + + EVEI S +RH N+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
R +L+ ++ P G++ + + + I ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRDIK N+LL S + K+ADFG S+ S + GT YL PE
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 472 QLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLITDWAWMLANSGKVDEIFDEFIRE 529
EK D++S G++ E + G+ E T ++ I+ +V+ F +F+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----------RVEFTFPDFV-T 233
Query: 530 EGSRAVMERFVR 541
EG+R ++ R ++
Sbjct: 234 EGARDLISRLLK 245
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 71 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 120
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFVGTRSYMSP 175
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 84 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 196 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 243
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 244 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PS 292
Query: 573 LPE 575
PE
Sbjct: 293 FPE 295
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 68 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 172
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD--EEFINEVEIISKIRHRNLLSLRGCC 353
+G+GA G V +I D+ D E E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+G ++L ++ G L D I + + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRDIK N+LLD K++DFGLA + L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 473 L-TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDW 509
E DV+S GIV+ +++G + + S +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 295 LIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCC 353
++G+G G+VY G L + +A+K+I + D++ + E+ + ++H+N++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 86
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL-----DVAKGLAYL 408
S E G + + + +P GSL +AL R + + + + + +GL YL
Sbjct: 87 --SFSENGFIKIFM-EQVPGGSL-----SALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
H I HRDIK N+L+++ K++DFG +K+ L G + T GT Y+APE
Sbjct: 139 H---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPEI 194
Query: 468 ALYGQ--LTEKSDVYSFGIVILELMSGR 493
G + +D++S G I+E+ +G+
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 130 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 179
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 180 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 234
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK+ H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 68 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 172
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 317 VKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL 376
VKQ TD E + EV+++ ++ H N+ L ++KG +LV + G L
Sbjct: 64 VKQKTD-----KESLLREVQLLKQLDHPNIXKLYEFF----EDKG-YFYLVGEVYTGGEL 113
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK--- 433
D I ++RK+ + +II V G+ Y H K I HRD+K N+LL+S+ K
Sbjct: 114 FDEI---ISRKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDAN 167
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ DFGL+ E ++ GT Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 168 IRIIDFGLSTH-FEASKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 68 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 172
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV K L+ +++ L+ K + I E++++ + ++
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G S + + + M GSL + A K++ K+ + V +GLAY
Sbjct: 78 GFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAY 129
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
L K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y+APE
Sbjct: 130 LRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPER 184
Query: 468 ALYGQLTEKSDVYSFGIVILELMSGR 493
+ +SD++S G+ ++EL GR
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 295 LIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCC 353
++G+G G+VY G L + +A+K+I + D++ + E+ + ++H+N++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 72
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL-----DVAKGLAYL 408
S E G + + + +P GSL +AL R + + + + + +GL YL
Sbjct: 73 --SFSENGFIKIFM-EQVPGGSL-----SALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
H I HRDIK N+L+++ K++DFG +K+ L G + T GT Y+APE
Sbjct: 125 H---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPEI 180
Query: 468 ALYGQ--LTEKSDVYSFGIVILELMSGR 493
G + +D++S G I+E+ +G+
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 68 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 172
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 68 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 172
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ IG+G+ G V+KG V +I DL+ DE E+ ++S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKGLA 406
G + KG + +++ +++ GS D + + Q+A ++ ++ KGL
Sbjct: 85 KYYGSYL-----KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLD 134
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q T V GT ++APE
Sbjct: 135 YLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 190
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGR 493
K+D++S GI +EL G
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK+ H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 62
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 174
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 98 CIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQITDLDTKGDE-E 330
G +W + ++ + ++++G GA S V+ LVA+K I +G E
Sbjct: 6 EGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDD--EKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
NE+ ++ KI+H N+++L DD E G +L+ + G L D I + +
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRI---VEKGF 112
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNIL---LDSEMKAKVADFGLAKQS 445
++I V + YLH I HRD+K N+L LD + K ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
+E + + GT GY+APE ++ D +S G++ L+ G N + L
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 15/239 (6%)
Query: 272 NSGAKWFRESELDQATGGFSQKNLIGQGASG--VVYKGTLEDGTLVAVKQI--TDLDTKG 327
+SG E+ Q+ + + IG+G+ G ++ K T EDG +K+I + + +K
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKE 66
Query: 328 DEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK 387
EE EV +++ ++H N++ R S +E G ++V D+ G L I NA
Sbjct: 67 REESRREVAVLANMKHPNIVQYR----ESFEENGSL-YIVMDYCEGGDLFKRI-NAQKGV 120
Query: 388 QLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
Q + + L ++H I HRDIKS NI L + ++ DFG+A+ L
Sbjct: 121 LFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLN 176
Query: 448 GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLI 506
L GT YL+PE KSD+++ G V+ EL + + E + L++
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQITDLDTKGDE-E 330
G +W + ++ + ++++G GA S V+ LVA+K I +G E
Sbjct: 6 EGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDD--EKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
NE+ ++ KI+H N+++L DD E G +L+ + G L D I + +
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRI---VEKGF 112
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNIL---LDSEMKAKVADFGLAKQS 445
++I V + YLH I HRD+K N+L LD + K ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
+E + + GT GY+APE ++ D +S G++ L+ G N + L
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 98 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 90 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 145 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 124
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 125 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 181
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 182 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 17/216 (7%)
Query: 295 LIGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLR 350
++G+G+ G V KGT E + +K+ + E + E +++ + L+
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
C + D R + V +++ G L HI K+ PQ +++ GL +LH
Sbjct: 86 HSCFQTVD----RLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLH- 137
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR-VAGTYGYLAPEYAL 469
K I +RD+K N++LDSE K+ADFG+ K+ + +TTR GT Y+APE
Sbjct: 138 --KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM--MDGVTTREFCGTPDYIAPEIIA 193
Query: 470 YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
Y + D +++G+++ E+++G+ + + L
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 229
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 175
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 176 FGMTRDIXETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQITDLDTKGDE-E 330
G +W + ++ + ++++G GA S V+ LVA+K I +G E
Sbjct: 6 EGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDD--EKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
NE+ ++ KI+H N+++L DD E G +L+ + G L D I + +
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRI---VEKGF 112
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNIL---LDSEMKAKVADFGLAKQS 445
++I V + YLH I HRD+K N+L LD + K ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
+E + + GT GY+APE ++ D +S G++ L+ G N + L
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 62
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 174
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 114/213 (53%), Gaps = 19/213 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKGL 405
+ L + + + +LV++F+ S L D + ++ALT L P K + + +GL
Sbjct: 67 VKLLDVIHTEN-----KLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 119 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 114/213 (53%), Gaps = 19/213 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKGL 405
+ L + + + +LV++F+ S L D + ++ALT L P K + + +GL
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 120 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 95 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 144
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 199
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E + +SD++S G+ ++E+ GR
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLSLRGCC 353
IG+G G V+ G L D TLVAVK + L +F+ E I+ + H N++ L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR-KQLAWPQRKKIILDVAKGLAYLHYGL 412
+Y M GD ++ T +L +++ D A G+ YL
Sbjct: 182 TQKQP--------IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE--- 230
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT-YGYLAPEYALYG 471
HRD+ + N L+ + K++DFG++++ +G + + + APE YG
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 472 QLTEKSDVYSFGIVILELMS 491
+ + +SDV+SFGI++ E S
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKG--DEEFINEVEIISKIRHRNLL 347
F + + +G G GVV+K + + LV +++ L+ K + I E++++ + ++
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGL 405
G S + + + M GSL + + +K P++ K+ + V KGL
Sbjct: 87 GFYGAFYSDGEIS-----ICMEHMDGGSL-----DQVLKKAGRIPEQILGKVSIAVIKGL 136
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YL K I HRD+K +NIL++S + K+ DFG++ Q ++ + GT Y++P
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSP 191
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSF 503
E + +SD++S G+ ++E+ GR + + + S
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM 229
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 115 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQITDLDTKGDE-E 330
G +W + ++ + ++++G GA S V+ LVA+K I +G E
Sbjct: 6 EGPRWKQAEDIRDI---YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDD--EKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
NE+ ++ KI+H N+++L DD E G +L+ + G L D I + +
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRI---VEKGF 112
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNIL---LDSEMKAKVADFGLAKQS 445
++I V + YLH I HRD+K N+L LD + K ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
+E + + GT GY+APE ++ D +S G++ L+ G N + L
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 86 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HR++ + N ++ + K+ DFG+ + E G+ L
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 198 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 245
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 246 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PS 294
Query: 573 LPE 575
PE
Sbjct: 295 FPE 297
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ T V T Y AP
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 296 IGQGASGVVYKGTLED------GTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G D T VAVK + + + + EF+NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-------SNALTRKQLAWPQRKKIILDV 401
L G KG+ +V + M G L ++ N R + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HR++ + N ++ + K+ DFG+ + E G+ L
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL--MSGRKVLETSNSSFLLITDWAWM 512
R ++APE G T SD++SFG+V+ E+ ++ + SN L
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------ 244
Query: 513 LANSGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPT 572
+ + G +D+ ER + +C +RPT + + +L+ D+ P+
Sbjct: 245 VMDGGYLDQ----------PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PS 293
Query: 573 LPE 575
PE
Sbjct: 294 FPE 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 105 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 160 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 293 KNLIGQGASGVVYKGTL----EDGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G SG V G L + VA+K + + +F++E I+ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G +G+ +V ++M +GSL + Q Q ++ V G+ Y
Sbjct: 114 RLEGVVT-----RGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRY 166
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAP 465
L HRD+ + N+L+DS + KV+DFGL++ + T G + AP
Sbjct: 167 LS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 466 EYALYGQLTEKSDVYSFGIVILELMS 491
E + + SDV+SFG+V+ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 296 IGQGASGVVYKGTLEDGTL---VAVKQITDLDTKGDEE----FINEVEIISKIRHRNLLS 348
+G G VY ED L VA+K I + + EE F EV S++ H+N++S
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIF-IPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+ DE+ +LV +++ +L ++I + L+ + G+ +
Sbjct: 76 MIDV-----DEEDDCYYLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDGIKHA 127
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
H I HRDIK NIL+DS K+ DFG+AK E T V GT Y +PE A
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 469 LYGQLTEKSDVYSFGIVILELMSGR 493
E +D+YS GIV+ E++ G
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 72 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 124
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
+ H + HRD+K N+L+++E K+ADFGLA+ T V T Y APE
Sbjct: 125 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 467 YALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
L + + D++S G + E+++ R +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 69
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISN--- 382
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 124
Query: 383 -ALTRKQLAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 125 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 181
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 182 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 175
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 176 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 172
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 171
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 72 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 124
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
+ H + HRD+K N+L+++E K+ADFGLA+ T V T Y APE
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 467 YALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
L + + D++S G + E+++ R +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 273 SGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTL------EDGTLVAVKQITDLDTK 326
S A + E + A + +GQG+ G+VY+G E T VA+K + + +
Sbjct: 32 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 91
Query: 327 GDE-EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALT 385
+ EF+NE ++ + +++ L G +G+ ++ + M G L ++ +
Sbjct: 92 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 146
Query: 386 RKQ----LAWPQRKKIIL---DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVAD 438
+ LA P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 147 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 203
Query: 439 FGLAKQSLE-------GQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
FG+ + E G+ L R +++PE G T SDV+SFG+V+ E+
Sbjct: 204 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLSLRGCC 353
IG+G G V+ G L D TLVAVK + L +F+ E I+ + H N++ L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR-KQLAWPQRKKIILDVAKGLAYLHYGL 412
+Y M GD ++ T +L +++ D A G+ YL
Sbjct: 182 TQKQP--------IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE--- 230
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT-YGYLAPEYALYG 471
HRD+ + N L+ + K++DFG++++ +G + + + APE YG
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 472 QLTEKSDVYSFGIVILELMS 491
+ + +SDV+SFGI++ E S
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 171
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 125 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 66 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
+ H + HRD+K N+L+++E K+ADFGLA+ T V T Y APE
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 467 YALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
L + + D++S G + E+++ R +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQIT-DLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT + P K + + +GL
Sbjct: 68 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALT--GIPLPLIKSYLFQLLQGL 120
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ T V T Y AP
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 176
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 65 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173
Query: 467 YALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
L + + D++S G + E+++ R +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 139 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 194 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 293 KNLIGQGASGVVYKGTL----EDGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G SG V G L + VA+K + + +F++E I+ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G +G+ +V ++M +GSL + Q Q ++ V G+ Y
Sbjct: 114 RLEGVVT-----RGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRY 166
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG--YLAP 465
L HRD+ + N+L+DS + KV+DFGL++ + T G + AP
Sbjct: 167 LS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 466 EYALYGQLTEKSDVYSFGIVILELMS 491
E + + SDV+SFG+V+ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGTLE------DGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+G GA G VY+G + VAVK + ++ ++ DE +F+ E IISK H+N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIILDVAKG 404
G + S RF++ + M G L + R LA + D+A G
Sbjct: 116 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAG-TY 460
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 171 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G E T VA+K + + + + EF+NE ++ + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIIL---DV 401
L G +G+ ++ + M G L ++ + + LA P K+I ++
Sbjct: 78 LLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 133 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
R +++PE G T SDV+SFG+V+ E+
Sbjct: 190 R------WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V G L+ VA+K + + K +F++E I+ + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G K ++ +FM +GSL + Q Q ++ +A G+ Y
Sbjct: 72 HLEGVVT-----KSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKY 124
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG-----Y 462
L HR + + NIL++S + KV+DFGL++ LE + T + G +
Sbjct: 125 L---ADMNYVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRW 180
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMS 491
APE Y + T SDV+S+GIV+ E+MS
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G E T VA+K + + + + EF+NE ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIIL---DV 401
L G +G+ ++ + M G L ++ + + LA P K+I ++
Sbjct: 80 LLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
R +++PE G T SDV+SFG+V+ E+
Sbjct: 192 R------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLE-DGTLVAVK-----QITDLDTKGDEEFINEVEIISKI 341
G + + +G G G V G E G VAVK +I LD G + E++ +
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG--KIRREIQNLKLF 73
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
RH +++ L + D F+V +++ G L D+I +L + +++ +
Sbjct: 74 RHPHIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQI 125
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
G+ Y H + + HRD+K N+LLD+ M AK+ADFGL+ +G+ G+
Sbjct: 126 LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPN 180
Query: 462 YLAPEYALYGQLT--EKSDVYSFGIVILELMSG 492
Y APE + G+L + D++S G+++ L+ G
Sbjct: 181 YAAPE-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ IG+G+ G V+KG V +I DL+ DE E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS-NALTRKQLAWPQRKKIILDVAKGLA 406
G + K + +++ +++ GS D + L Q+A I+ ++ KGL
Sbjct: 69 KYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLD 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q T V GT ++APE
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 174
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGR 493
K+D++S GI +EL G
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 294 NLIGQGASGVVYKGTLEDGTL----VAVKQITDL-DTKGDEEFINEVEIISKIRHRNLLS 348
+IG+G GVVY G D A+K ++ + + + E F+ E ++ + H N+L+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII---LDVAKGL 405
L G + + L + +P GD + R P K +I L VA+G+
Sbjct: 87 LIGIMLPPEG-------LPHVLLPYMCHGDLLQ--FIRSPQRNPTVKDLISFGLQVARGM 137
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG-----QSHLTTRVAGTY 460
YL + HRD+ + N +LD KVADFGLA+ L+ Q H R+ +
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
L E + T KSDV+SFG+++ EL++
Sbjct: 195 TAL--ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ IG+G+ G V+KG V +I DL+ DE E+ ++S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS-NALTRKQLAWPQRKKIILDVAKGLA 406
G + K + +++ +++ GS D + L Q+A I+ ++ KGL
Sbjct: 89 KYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLD 138
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q T V GT ++APE
Sbjct: 139 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 194
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGR 493
K+D++S GI +EL G
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 19/214 (8%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKG 404
++ L + + + +LV++F+ L D + ++ALT L P K + + +G
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFL-HQDLKDFMDASALTGIPL--PLIKSYLFQLLQG 115
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYL 463
LA+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y
Sbjct: 116 LAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
APE L + + D++S G + E+++ R +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V G L+ VA+K + K +F++E I+ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQRKKIILDVAKG 404
L G K K ++ ++M +GSL +A RK + Q ++ + G
Sbjct: 79 HLEGVVT-----KCKPVMIITEYMENGSL-----DAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGT-YGY 462
+ YL + HRD+ + NIL++S + KV+DFG+++ + ++ TTR +
Sbjct: 129 MKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMS 491
APE Y + T SDV+S+GIV+ E+MS
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 315 VAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSG 374
+ + + T + T + + + EV ++ + H N++ L E + +LV + G
Sbjct: 67 IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRNYYLVMECYKGG 121
Query: 375 SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK- 433
L D I + R + II V G+ YLH K I HRD+K N+LL+S+ K
Sbjct: 122 ELFDEI---IHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKD 175
Query: 434 --AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFGL+ E Q + R+ GT Y+APE L + EK DV+S G+++ L++
Sbjct: 176 ALIKIVDFGLS-AVFENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
Query: 492 G 492
G
Sbjct: 233 G 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
++ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 117 SFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 172
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 39/222 (17%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLS 348
+G+ G VYKG L E VA+K + D + EEF +E + ++++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 349 LRGCCVSSDDEKGKRRFL------VYDFM----PSGSLGDHISNALTRKQLAWPQRKKII 398
L G V + D+ F +++F+ P +G + + L P ++
Sbjct: 94 LLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 399 LDVAKGLAYL--HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQ 449
+A G+ YL H+ + H+D+ + N+L+ ++ K++D GL ++ L G
Sbjct: 152 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
S L R ++APE +YG+ + SD++S+G+V+ E+ S
Sbjct: 207 SLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V G L+ VA+K + K +F++E I+ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRK---QLAWPQRKKIILDVAKG 404
L G K K ++ ++M +GSL +A RK + Q ++ + G
Sbjct: 73 HLEGVVT-----KCKPVMIITEYMENGSL-----DAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGT-YGY 462
+ YL + HRD+ + NIL++S + KV+DFG+++ + ++ TTR +
Sbjct: 123 MKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMS 491
APE Y + T SDV+S+GIV+ E+MS
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G E T VA+K + + + + EF+NE ++ + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISN----ALTRKQLAWPQRKKIIL---DV 401
L G +G+ ++ + M G L ++ + LA P K+I ++
Sbjct: 83 LLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G+ L
Sbjct: 138 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
R +++PE G T SDV+SFG+V+ E+
Sbjct: 195 R------WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 39/222 (17%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITD-LDTKGDEEFINEVEIISKIRHRNLLS 348
+G+ G VYKG L E VA+K + D + EEF +E + ++++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 349 LRGCCVSSDDEKGKRRFL------VYDFM----PSGSLGDHISNALTRKQLAWPQRKKII 398
L G V + D+ F +++F+ P +G + + L P ++
Sbjct: 77 LLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 399 LDVAKGLAYL--HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-------SLEGQ 449
+A G+ YL H+ + H+D+ + N+L+ ++ K++D GL ++ L G
Sbjct: 135 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
S L R ++APE +YG+ + SD++S+G+V+ E+ S
Sbjct: 190 SLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + ++GQGA G V K D A+K+I + K ++EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVR 66
Query: 349 LRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRKKII 398
+ + +K F+ ++ +G+L D H N ++ W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLF 122
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK-------------QS 445
+ + L+Y+H I HRD+K NI +D K+ DFGLAK Q+
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 446 LEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 490
L G S T GT Y+A E G EK D+YS GI+ E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 276 KWFRESELDQATGGFSQKNLIGQGASGVV----YKGTLEDGTLVAVKQITDLDTKGDEEF 331
KW + + T F Q ++G+G G V + T + +++ KG+
Sbjct: 174 KWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 332 INEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAW 391
+NE +I+ K+ R ++SL + D LV M G L HI + Q +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDA-----LCLVLTLMNGGDLKFHIYHM---GQAGF 283
Query: 392 PQRKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQ 449
P+ + + ++ GL LH + I +RD+K NILLD +++D GLA EGQ
Sbjct: 284 PEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
+ + RV GT GY+APE + T D ++ G ++ E+++G+
Sbjct: 341 T-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 66 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK-GDEEFINEVEIISKIRHR 344
+ F K+L+G+GA GVV T + G +VA+K+I D + E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
N++++ E +++ + M + + ++ + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE---------GQSHLTTR 455
+ LH + HRD+K +N+L++S KV DFGLA+ E GQ T
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 456 VAGTYGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVL 496
T Y APE L + + DV+S G ++ EL R +
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 67 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 67 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 67 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 66 VKLLDVIHTEN-----KLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 66 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 66 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK-GDEEFINEVEIISKIRHR 344
+ F K+L+G+GA GVV T + G +VA+K+I D + E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
N++++ E +++ + M + + ++ + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE---------GQSHLTTR 455
+ LH + HRD+K +N+L++S KV DFGLA+ E GQ T
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 456 VAGTYGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVL 496
T Y APE L + + DV+S G ++ EL R +
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLA 464
A+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 465 PEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
PE L + + D++S G + E+++ R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 69 VKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 122 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 276 KWFRESELDQATGGFSQKNLIGQGASGVV----YKGTLEDGTLVAVKQITDLDTKGDEEF 331
KW + + T F Q ++G+G G V + T + +++ KG+
Sbjct: 174 KWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 332 INEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAW 391
+NE +I+ K+ R ++SL + D LV M G L HI + Q +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDA-----LCLVLTLMNGGDLKFHIYHM---GQAGF 283
Query: 392 PQRKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQ 449
P+ + + ++ GL LH + I +RD+K NILLD +++D GLA EGQ
Sbjct: 284 PEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
+ + RV GT GY+APE + T D ++ G ++ E+++G+
Sbjct: 341 T-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++F+ ++ALT L P K + + +GLA
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEFLHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+ +I D +T+G I E+ ++ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 64 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 172
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+ +I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++F+ ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 171
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLS 348
+GQG+ G+VY+G E T VA+K + + + + EF+NE ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ----LAWPQRKKIIL---DV 401
L G +G+ ++ + M G L ++ + + LA P K+I ++
Sbjct: 80 LLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE-------GQSHLTT 454
A G+AYL+ HRD+ + N + + K+ DFG+ + E G+ L
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 455 RVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
R +++PE G T SDV+SFG+V+ E+
Sbjct: 192 R------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQIT--DLDTKGDEEFINEVEIISKIRHRNL 346
+ + +IG GA+ VV VA+K+I T DE + E++ +S+ H N+
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPNI 70
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSL----------GDHISNALTRKQLAWPQRKK 396
+S V D+ +LV + GS+ G+H S L +A
Sbjct: 71 VSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA-----T 120
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRV 456
I+ +V +GL YLH K HRD+K+ NILL + ++ADFG++ G +V
Sbjct: 121 ILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 457 ----AGTYGYLAPEYALYGQLTE-KSDVYSFGIVILELMSG 492
GT ++APE + + K+D++SFGI +EL +G
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 40/225 (17%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQI------TDLDTKGDEEFINEVEIISKIR 342
+ + +IG GA+ VV VA+K+I T +D E + E++ +S+
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-----ELLKEIQAMSQCH 71
Query: 343 HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL----------GDHISNALTRKQLAWP 392
H N++S V D+ +LV + GS+ G+H S L +A
Sbjct: 72 HPNIVSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA-- 124
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
I+ +V +GL YLH K HRD+K+ NILL + ++ADFG++ G
Sbjct: 125 ---TILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 453 TTRV----AGTYGYLAPEYALYGQLTE-KSDVYSFGIVILELMSG 492
+V GT ++APE + + K+D++SFGI +EL +G
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 293 KNLIGQGASGVVYKGTLE----DGTLVAVKQI-TDLDTKGDEEFINEVEIISKIRHRNLL 347
+ +IG G G V G L+ VA+K + K +F+ E I+ + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L G K K +V ++M +GSL + Q Q ++ ++ G+ Y
Sbjct: 87 HLEGVVT-----KSKPVMIVTEYMENGSLDTFLKK--NDGQFTVIQLVGMLRGISAGMKY 139
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGT-YGYLAP 465
L HRD+ + NIL++S + KV+DFGL++ + ++ TTR + AP
Sbjct: 140 LS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 466 EYALYGQLTEKSDVYSFGIVILELMS--GRKVLETSNSSFL 504
E + + T SDV+S+GIV+ E++S R E +N +
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ IG+G+ G V+KG V +I DL+ DE E+ ++S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS-NALTRKQLAWPQRKKIILDVAKGLA 406
G + K + +++ +++ GS D + L Q+A I+ ++ KGL
Sbjct: 84 KYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLD 133
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q V GT ++APE
Sbjct: 134 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPE 189
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGR 493
K+D++S GI +EL G
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
+ K++IG+G S VV + G AVK + + E + EV ++ L
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 349 LRG----CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
+ G + E FLV+D M G L D+++ + L+ + + I+ + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEA 212
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
+++LH I HRD+K NILLD M+ +++DFG + G+ + GT GYLA
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLA 267
Query: 465 PE---------YALYGQLTEKSDVYSFGIVILELMSG 492
PE + YG+ + D+++ G+++ L++G
Sbjct: 268 PEILKCSMDETHPGYGK---EVDLWACGVILFTLLAG 301
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + +LI +G Y L+ +V +KQ+ E +E ++S + H
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV--------EHTNDERLMLSIVTHP 66
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ--RKKIILDVA 402
++ + G + ++ F++ D++ G L +L RK +P K +V
Sbjct: 67 FIIRMWGTF-----QDAQQIFMIMDYIEGGELF-----SLLRKSQRFPNPVAKFYAAEVC 116
Query: 403 KGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
L YLH I +RD+K NILLD K+ DFG AK + +T + GT Y
Sbjct: 117 LALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDY 169
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNS 501
+APE + D +SFGI+I E+++G SN+
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE NE+ ++ + H N++ L E K +LV +F G L + I N R +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIIN---RHK 142
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSE---MKAKVADFGLAKQS 445
I+ + G+ YLH K I HRDIK NILL+++ + K+ DFGL+ S
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS--S 197
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+ + GT Y+APE L + EK DV+S G+++ L+ G
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ IG+G+ G V+KG V +I DL+ DE E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS-NALTRKQLAWPQRKKIILDVAKGLA 406
G + K + +++ +++ GS D + L Q+A I+ ++ KGL
Sbjct: 69 KYYGSYL-----KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLD 118
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q V GT ++APE
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPE 174
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGR 493
K+D++S GI +EL G
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRN 345
+G FS+ L+ Q +G L A+K I D NE+ ++ KI+H N
Sbjct: 18 GSGAFSEVFLVKQRLTG----------KLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
+++L E +LV + G L D I L R +I V +
Sbjct: 68 IVTLEDIY-----ESTTHYYLVMQLVSGGELFDRI---LERGVYTEKDASLVIQQVLSAV 119
Query: 406 AYLHYGLKPAIYHRDIKSTNILL---DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
YLH + I HRD+K N+L + K + DFGL+K Q+ + + GT GY
Sbjct: 120 KYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME---QNGIMSTACGTPGY 173
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+APE ++ D +S G++ L+ G
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ E+ I+ K+ H N++ L DD ++V++ + G + T K
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGP----VMEVPTLKP 133
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L+ Q + D+ KG+ YLHY I HRDIK +N+L+ + K+ADFG++ + +G
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE-FKG 189
Query: 449 QSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYS 481
L + GT ++APE L+E ++S
Sbjct: 190 SDALLSNTVGTPAFMAPE-----SLSETRKIFS 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK-GDEEFINEVEIISKIRHR 344
+ F K+L+G+GA GVV T + G +VA+K+I D + E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
N++++ E +++ + M + + ++ + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE---------GQSHLTTR 455
+ LH + HRD+K +N+L++S KV DFGLA+ E GQ
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 456 VAGTYGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVL 496
T Y APE L + + DV+S G ++ EL R +
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 290 FSQKNLIGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRN 345
F ++G+G+ G V+ K T + + A+K+ L E + E ++S
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWPQRKKIILDV 401
L+ C + + F V +++ G L HI + L+R +IIL
Sbjct: 80 FLTHMFCTFQTKE----NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY---AAEIIL-- 130
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL +LH I +RD+K NILLD + K+ADFG+ K+++ G + T GT
Sbjct: 131 --GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPD 184
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
Y+APE L + D +SFG+++ E++ G+
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 289 GFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRN 345
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
++ L + + + +LV++ + ++ALT L P K + + +GL
Sbjct: 63 IVKLLDVIHTEN-----KLYLVFEHVHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGL 115
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + HRD+K N+L+++E K+ADFGLA+ + T T Y AP
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAP 171
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKGDEEFINEVEIISK-------IRHRNL 346
IG+GA G V K + G ++AVK+I + +D K ++ + +++++ + ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 347 LSLRGCC-------VSSDDEKGKRRFLVYD-FMPSGSLGDHISNALTRKQLAWPQRKKII 398
L G C +S D+ K + V D +P LG KI
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG------------------KIT 131
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG 458
L K L +L LK I HRDIK +NILLD K+ DFG++ Q ++ S TR AG
Sbjct: 132 LATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAG 187
Query: 459 TYGYLAPEY----ALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLIT 507
Y+APE A +SDV+S GI + EL +GR NS F +T
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT 240
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQIT-DLDTKG-DEEFINEVEIISKIRHRNLLSLRGCC 353
+G+G GVVYK G +VA+K+I D + +G I E+ ++ ++ H N++SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 354 VSSDDEKGKRRFLVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
S + LV++FM + D L Q+ K + + +G+A+ H
Sbjct: 89 HSE-----RCLTLVFEFMEKDLKKVLDENKTGLQDSQI-----KIYLYQLLRGVAHCH-- 136
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ I HRD+K N+L++S+ K+ADFGLA+ T V T Y AP+ +
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 472 QLTEKS-DVYSFGIVILELMSGRKVL 496
+ S D++S G + E+++G+ +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQIT-DLDTKG-DEEFINEVEIISKIRHRNLLSLRGCC 353
+G+G GVVYK G +VA+K+I D + +G I E+ ++ ++ H N++SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 354 VSSDDEKGKRRFLVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
S + LV++FM + D L Q+ K + + +G+A+ H
Sbjct: 89 HSE-----RCLTLVFEFMEKDLKKVLDENKTGLQDSQI-----KIYLYQLLRGVAHCH-- 136
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYG 471
+ I HRD+K N+L++S+ K+ADFGLA+ T V T Y AP+ +
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 472 QLTEKS-DVYSFGIVILELMSGRKVL 496
+ S D++S G + E+++G+ +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLL 347
F++ + IG+G+ G VYKG V +I DL+ DE E+ ++S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS-NALTRKQLAWPQRKKIILDVAKGLA 406
G + K + +++ +++ GS D + L +A I+ ++ KGL
Sbjct: 81 RYFGSYL-----KSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLD 130
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YLH K HRDIK+ N+LL + K+ADFG+A Q + Q V GT ++APE
Sbjct: 131 YLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPE 186
Query: 467 YALYGQLTEKSDVYSFGIVILELMSG 492
K+D++S GI +EL G
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
L L C + D R + V +++ G L HI K+ P ++A GL
Sbjct: 83 LTQLHSCFQTMD-----RLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGL 134
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSL-EGQSHLTTRVAGTYGYLA 464
+L I +RD+K N++LDSE K+ADFG+ K+++ +G + T GT Y+A
Sbjct: 135 FFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 189
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
PE Y + D ++FG+++ E+++G+ E + L
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK--QSLEGQSHLTTR 455
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ +++ TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK-TTN 218
Query: 456 VAGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
L L C + D R + V +++ G L HI K+ P ++A GL
Sbjct: 404 LTQLHSCFQTMD-----RLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGL 455
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSL-EGQSHLTTRVAGTYGYLA 464
+L I +RD+K N++LDSE K+ADFG+ K+++ +G + T GT Y+A
Sbjct: 456 FFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 510
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
PE Y + D ++FG+++ E+++G+ E + L
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 296 IGQGASGVVYKGTL---EDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRG 351
+G G G V +G + VA+K + K D EE + E +I+ ++ + ++ L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
C + + LV + G L + R+++ +++ V+ G+ YL
Sbjct: 78 VC------QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE-- 127
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYAL 469
+ HRD+ + N+LL + AK++DFGL+K S+ T R AG + + APE
Sbjct: 128 -EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 186
Query: 470 YGQLTEKSDVYSFGIVILELMS 491
+ + + +SDV+S+G+ + E +S
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALS 208
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 295 LIGQGASG-VVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISK-IRHRNLLSL 349
+IG+G+ G V+ + AVK + L K ++ ++E ++ K ++H L+ L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
++D + + V D++ G L H+ + P+ + ++A L YLH
Sbjct: 105 HFSFQTAD-----KLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH 156
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I +RD+K NILLDS+ + DFGL K+++E S T+ GT YLAPE L
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPE-VL 211
Query: 470 YGQLTEKS-DVYSFGIVILELMSGRKVLETSNSS 502
+ Q +++ D + G V+ E++ G + N++
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 245
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + ++GQGA G V K D A+K+I + K ++EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVR 66
Query: 349 LRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRKKII 398
+ + +K F+ ++ + +L D H N ++ W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK-------------QS 445
+ + L+Y+H I HRD+K NI +D K+ DFGLAK Q+
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 446 LEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 490
L G S T GT Y+A E G EK D+YS GI+ E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 290 FSQKNLIGQGASGVVY---KGTLED-GTLVAVKQITDLDTKGDEEFINEVE--IISKIRH 343
F ++GQG+ G V+ K T D G L A+K + K + ++E I++ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDV 401
++ L + + +L+ DF+ G L +S K++ + + K + ++
Sbjct: 90 PFVVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLAEL 139
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
A GL +LH I +RD+K NILLD E K+ DFGL+K++++ + + GT
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVE 195
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
Y+APE + +D +S+G+++ E+++G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQIT---DLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
IG GA GVV G VA+K+I D+ T + + E++I+ +H N+++++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA-KRTLRELKILKHFKHDNIIAIKD 121
Query: 352 CCVSSDDE-KGKRRFLVYDFMPSG-SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
+ + K ++V D M S H S LT + + + + + +GL Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMH 176
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK----QSLEGQSHLTTRVAGTYGYLAP 465
+ HRD+K +N+L++ + K+ DFG+A+ E Q +T VA T Y AP
Sbjct: 177 SA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAP 232
Query: 466 EYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
E L + T+ D++S G + E+++ R++ N
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK--QSLEGQSHLTTR 455
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ +++ TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK-TTN 218
Query: 456 VAGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 290 FSQKNLIGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRN 345
F ++G+G+ G V+ K T + + A+K+ L E + E ++S
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA----LTRKQLAWPQRKKIILDV 401
L+ C + + F V +++ G L HI + L+R +IIL
Sbjct: 79 FLTHMFCTFQTKE----NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY---AAEIIL-- 129
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL +LH I +RD+K NILLD + K+ADFG+ K+++ G + T GT
Sbjct: 130 --GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPD 183
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
Y+APE L + D +SFG+++ E++ G+
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI--RHRNLLSLRGCC 353
IG+G G V+ G G VAVK T + + E EI + RH N+L
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAA- 99
Query: 354 VSSDDEKGK----RRFLVYDFMPSGSLGDHI-SNALTRKQLAWPQRKKIILDVAKGLAYL 408
D KG + +L+ D+ +GSL D++ S L K + K+ GL +L
Sbjct: 100 ----DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML-----KLAYSSVSGLCHL 150
Query: 409 HYGL-----KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL----TTRVAGT 459
H + KPAI HRD+KS NIL+ +AD GLA + + + + TRV GT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GT 209
Query: 460 YGYLAPEY------ALYGQLTEKSDVYSFGIVILEL 489
Y+ PE + Q +D+YSFG+++ E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + +
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKNTTN 218
Query: 458 G--TYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI-----RHR 344
F +IG+G+ V L+ + ++ + D+E I+ V+ + H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L C + R F V +++ G L H+ +++L + +++
Sbjct: 67 FLVGLHSCFQTE-----SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
L YLH + I +RD+K N+LLDSE K+ D+G+ K+ L T+ GT Y+A
Sbjct: 119 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIA 174
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
PE D ++ G+++ E+M+GR + SS
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI-----RHR 344
F +IG+G+ V L+ + ++ + D+E I+ V+ + H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L C + R F V +++ G L H+ +++L + +++
Sbjct: 71 FLVGLHSCFQTE-----SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 122
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
L YLH + I +RD+K N+LLDSE K+ D+G+ K+ L T+ GT Y+A
Sbjct: 123 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIA 178
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
PE D ++ G+++ E+M+GR + SS
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 43/261 (16%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + LIG G G V+K DG ++++ + K + EV+ ++K+ H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVH 69
Query: 349 LRGCC-------VSSDDE-----------------KGKRRFLVYDFMPSGSLGDHISNAL 384
GC +SDD K K F+ +F G+L I
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 385 TRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ 444
K L ++ + KG+ Y+H + HRD+K +NI L + K+ DFGL
Sbjct: 130 GEK-LDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-T 184
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFL 504
SL+ TR GT Y++PE ++ D+Y+ G+++ EL+ V +T+ +
Sbjct: 185 SLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSK 240
Query: 505 LITDWAWMLANSGKVDEIFDE 525
TD G + +IFD+
Sbjct: 241 FFTD-----LRDGIISDIFDK 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCC--------VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C + + KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI-----RHR 344
F +IG+G+ V L+ + ++ + D+E I+ V+ + H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L C + R F V +++ G L H+ +++L + +++
Sbjct: 82 FLVGLHSCFQTE-----SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 133
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
L YLH + I +RD+K N+LLDSE K+ D+G+ K+ L T+ GT Y+A
Sbjct: 134 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIA 189
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
PE D ++ G+++ E+M+GR + SS
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI-----RHR 344
F +IG+G+ V L+ + ++ + D+E I+ V+ + H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L C + R F V +++ G L H+ +++L + +++
Sbjct: 114 FLVGLHSCFQTE-----SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
L YLH + I +RD+K N+LLDSE K+ D+G+ K+ L T+ GT Y+A
Sbjct: 166 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIA 221
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
PE D ++ G+++ E+M+GR + SS
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 259
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQIT---DLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
IG GA GVV G VA+K+I D+ T + + E++I+ +H N+++++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA-KRTLRELKILKHFKHDNIIAIKD 120
Query: 352 CCVSSDDE-KGKRRFLVYDFMPSG-SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
+ + K ++V D M S H S LT + + + + + +GL Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMH 175
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK----QSLEGQSHLTTRVAGTYGYLAP 465
+ HRD+K +N+L++ + K+ DFG+A+ E Q +T VA T Y AP
Sbjct: 176 SA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAP 231
Query: 466 EYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
E L + T+ D++S G + E+++ R++ N
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQI-TDLDTKG-DEEFINEVEIISKIRHRNL 346
F + IG+G GVVYK + G +VA+K+I D +T+G I E+ ++ ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L + + + +LV++ + ++ALT L P K + + +GLA
Sbjct: 68 VKLLDVIHTEN-----KLYLVFEHVDQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAGTYGYLAP 465
+ H + HRD+K N+L+++E K+ADFGLA+ + +++ V T Y AP
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 466 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 496
E L + + D++S G + E+++ R +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 30/248 (12%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + LIG G G V+K DG +K++ + K + EV+ ++K+ H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVH 68
Query: 349 LRGC-----------CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
GC +S K K F+ +F G+L I K L ++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALEL 127
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ KG+ Y+H + +RD+K +NI L + K+ DFGL SL+ R
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGK-RXRSK 182
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSG 517
GT Y++PE ++ D+Y+ G+++ EL+ V +T+ + TD G
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFFTD-----LRDG 234
Query: 518 KVDEIFDE 525
+ +IFD+
Sbjct: 235 IISDIFDK 242
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLE-DGTLVAVK-----QITDLDTKGDEEFINEVEIISKI 341
G + + +G G G V G + G VAVK +I LD G + E++ +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG--KIKREIQNLKLF 68
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
RH +++ L + D F+V +++ G L D+I +++ + +++ +
Sbjct: 69 RHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQI 120
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
+ Y H + + HRD+K N+LLD+ M AK+ADFGL+ +G+ T+ G+
Sbjct: 121 LSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPN 175
Query: 462 YLAPEYALYGQL--TEKSDVYSFGIVILELMSG 492
Y APE + G+L + D++S G+++ L+ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 288 GGFSQKNLIGQGASGVVYKGT-LEDGTLVAVK--QITDL-DTKGDEEFINEVEIISKIRH 343
F + IG+G VY+ L DG VA+K QI DL D K + I E++++ ++ H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK--KIILDV 401
N++ + ++ +V + +G L I + +K+L P+R K + +
Sbjct: 92 PNVIKYYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQKRLI-PERTVWKYFVQL 145
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
L ++H + HRDIK N+ + + K+ D GL + ++ + GT
Sbjct: 146 CSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR-FFSSKTTAAHSLVGTPY 201
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILEL 489
Y++PE KSD++S G ++ E+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGFS +L+ L DG A+K+I + + EE E ++ H N+L
Sbjct: 40 GGFSYVDLVE----------GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 348 SLRGCCVSSDDEKGKRR--FLVYDFMPSGSLGDHIS------NALTRKQLAWPQRKKIIL 399
L C+ E+G + +L+ F G+L + I N LT Q+ W ++L
Sbjct: 90 RLVAYCLR---ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLL 141
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS---LEGQSHLTT-- 454
+ +GL +H HRD+K TNILL E + + D G Q+ +EG T
Sbjct: 142 GICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 455 ---RVAGTYGYLAPE-YALYGQ--LTEKSDVYSFGIVILELMSG 492
T Y APE +++ + E++DV+S G V+ +M G
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 296 IGQGASGVVYKGTL---EDGTLVAVKQITDLDTKGD-EEFINEVEIISKIRHRNLLSLRG 351
+G G G V +G + VA+K + K D EE + E +I+ ++ + ++ L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
C + + LV + G L + R+++ +++ V+ G+ YL
Sbjct: 404 VC------QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE-- 453
Query: 412 LKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYAL 469
+ HR++ + N+LL + AK++DFGL+K S+ T R AG + + APE
Sbjct: 454 -EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 470 YGQLTEKSDVYSFGIVILELMS 491
+ + + +SDV+S+G+ + E +S
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALS 534
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 43/248 (17%)
Query: 278 FRESELDQATGGFSQKNL-----IGQGASGVVYKGTLED------GTLVAVKQITD-LDT 325
FRE E D F ++NL +G GA G V T VAVK + + D+
Sbjct: 31 FREYEYD-LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS 89
Query: 326 KGDEEFINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA- 383
E ++E+++++++ H N+++L G C S +L++++ G L +++ +
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGP-----IYLIFEYCCYGDLLNYLRSKR 144
Query: 384 --LTRKQLAWPQRKKI-----------------ILDVAKGLAYLHYGLKPAIYHRDIKST 424
+ ++ + +K++ VAKG+ +L + + HRD+ +
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAAR 201
Query: 425 NILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT-YGYLAPEYALYGQLTEKSDVYSFG 483
N+L+ K+ DFGLA+ + +++ A ++APE G T KSDV+S+G
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 261
Query: 484 IVILELMS 491
I++ E+ S
Sbjct: 262 ILLWEIFS 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
++ L G C KG R + P G + N + +Q+ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGT----LVAVKQITDLDTKGDEEFINEVE--IISKIRH 343
F ++GQG+ G V+ G+ L A+K + K + ++E I+ ++ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDV 401
++ L + + +L+ DF+ G L +S K++ + + K + ++
Sbjct: 86 PFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLAEL 135
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
A L +LH I +RD+K NILLD E K+ DFGL+K+S++ + + GT
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVE 191
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
Y+APE T+ +D +SFG+++ E+++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+GA G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ ++ADFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGT----LVAVKQITDLDTKGDEEFINEVE--IISKIRH 343
F ++GQG+ G V+ G+ L A+K + K + ++E I+ ++ H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDV 401
++ L + + +L+ DF+ G L +S K++ + + K + ++
Sbjct: 87 PFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLAEL 136
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
A L +LH I +RD+K NILLD E K+ DFGL+K+S++ + + GT
Sbjct: 137 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVE 192
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
Y+APE T+ +D +SFG+++ E+++G
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGT----LVAVKQITDLDTKGDEEFINEVE--IISKIRH 343
F ++GQG+ G V+ G+ L A+K + K + ++E I+ ++ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDV 401
++ L + + +L+ DF+ G L +S K++ + + K + ++
Sbjct: 86 PFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLAEL 135
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
A L +LH I +RD+K NILLD E K+ DFGL+K+S++ + + GT
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVE 191
Query: 462 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
Y+APE T+ +D +SFG+++ E+++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 361 GKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRK-KIILDVAKGLAYLHYGLKPAIY 417
G ++V +++ +L D H +T P+R ++I D + L + H I
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQN---GII 138
Query: 418 HRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL--TTRVAGTYGYLAPEYALYGQLTE 475
HRD+K NIL+ + KV DFG+A+ + + + T V GT YL+PE A +
Sbjct: 139 HRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 476 KSDVYSFGIVILELMSG 492
+SDVYS G V+ E+++G
Sbjct: 199 RSDVYSLGCVLYEVLTG 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+G G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 266 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+G G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 207 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 32 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 84
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 85 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPE 466
LH + + HRD+K N+ L+ +++ K+ DFGLA K +G+ T + GT Y+APE
Sbjct: 137 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 191
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+G G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 209 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 80
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 81 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 132
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPE 466
LH + + HRD+K N+ L+ +++ K+ DFGLA K +G+ T + GT Y+APE
Sbjct: 133 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 80
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 81 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 132
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPE 466
LH + + HRD+K N+ L+ +++ K+ DFGLA K +G+ T + GT Y+APE
Sbjct: 133 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
Query: 467 YALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGD--HISNALTRKQ 388
F E + + + H ++++ ++ G ++V +++ +L D H +T
Sbjct: 59 FRREAQNAAALNHPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--- 114
Query: 389 LAWPQRK-KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLE 447
P+R ++I D + L + H I HRD+K NI++ + KV DFG+A+ +
Sbjct: 115 ---PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 448 GQSHLTTRVA--GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+ +T A GT YL+PE A + +SDVYS G V+ E+++G
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 290 FSQKNLI---GQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRN 345
F Q N + + SG ++KG + + +V V ++ D T+ +F E + H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
+L + G C S L+ +MP GSL + + T + Q K LD+A+G+
Sbjct: 69 VLPVLGACQSP---PAPHPTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGM 124
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKV--ADFGLAKQSLEGQSHLTTRVAGTYGYL 463
A+LH L+P I + S ++++D +M A++ AD + QS G+ + VA
Sbjct: 125 AFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGRMYAPAWVAPEALQK 182
Query: 464 APEYALYGQLTEKSDVYSFGIVILELMS 491
PE +D++SF +++ EL++
Sbjct: 183 KPE----DTNRRSADMWSFAVLLWELVT 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLE-DGTLVAVK-----QITDLDTKGDEEFINEVEIISKI 341
G + + +G G G V G + G VAVK +I LD G + E++ +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG--KIKREIQNLKLF 68
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
RH +++ L + D F+V +++ G L D+I +++ + +++ +
Sbjct: 69 RHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQI 120
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
+ Y H + + HRD+K N+LLD+ M AK+ADFGL+ +G+ G+
Sbjct: 121 LSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPN 175
Query: 462 YLAPEYALYGQL--TEKSDVYSFGIVILELMSG 492
Y APE + G+L + D++S G+++ L+ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQITDLDTKGD-EEFINEVEIISKI-RHRN 345
+G+G G V K ++ VAVK + D T+ D + ++E+E++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + N + +Q+ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH-LTTRV 456
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + TT
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 457 AGTYGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 212 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 296 IGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
+G GA G V K T + + +K+ + T ++EV ++ ++ H N++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
E + +LV + G L D I + R++ + I+ V G YLH
Sbjct: 89 FF-----EDKRNYYLVMEVYRGGELFDEI---ILRQKFSEVDAAVIMKQVLSGTTYLH-- 138
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
K I HRD+K N+LL+S+ + K+ DFGL+ E + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGKMKERL-GTAYYIAPE-V 194
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
L + EK DV+S G+++ L+ G
Sbjct: 195 LRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 299 GASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI----NEVEIISKIRHRNLLSLRGCCV 354
G S V L D VAVK + D D F E + + + H ++++
Sbjct: 24 GMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG- 81
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
++ G ++V +++ +L D H +T K+ ++I D + L + H
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-----EVIADACQALNFSHQN- 135
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA--GTYGYLAPEYALY 470
I HRD+K NI++ + KV DFG+A+ + + +T A GT YL+PE A
Sbjct: 136 --GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 471 GQLTEKSDVYSFGIVILELMSG 492
+ +SDVYS G V+ E+++G
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 361 GKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYH 418
G ++V +++ +L D H +T K+ ++I D + L + H I H
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-----EVIADACQALNFSHQN---GIIH 139
Query: 419 RDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA--GTYGYLAPEYALYGQLTEK 476
RD+K NI++ + KV DFG+A+ + + +T A GT YL+PE A + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 477 SDVYSFGIVILELMSG 492
SDVYS G V+ E+++G
Sbjct: 200 SDVYSLGCVLYEVLTG 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLR 350
IG+G+ GVV+K D G +VA+K+ L+++ D + E+ ++ +++H NL++L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDH-ISNALTRKQLAWPQR--KKIILDVAKGLAY 407
+ +R LV+++ DH + + L R Q P+ K I + + +
Sbjct: 69 EVF-----RRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
H K HRD+K NIL+ K+ DFG A+ L G S T Y +PE
Sbjct: 118 CH---KHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEVATRWYRSPE- 172
Query: 468 ALYG--QLTEKSDVYSFGIVILELMSG 492
L G Q DV++ G V EL+SG
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 18/224 (8%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISK 340
AT + IG GA G VYK G VA+K + G+E + EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 341 IR---HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+ H N++ L C +S ++ + LV++ + L ++ A L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKA-PPPGLPAETIKDL 117
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ +GL +LH I HRD+K NIL+ S K+ADFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALAPVV 172
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNS 501
T Y APE L D++S G + E+ RK L NS
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 284 DQATGGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQI--TDLDTKGDEEFINEVEIISK 340
D G + IG+G + V + G VAVK I T L++ ++ EV I+
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 341 IRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
+ H N++ L E K +LV ++ G + D++ W + K+
Sbjct: 63 LNHPNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAK 111
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY 460
+ ++ + Y + I HRD+K+ N+LLD++M K+ADFG + + G T G+
Sbjct: 112 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSP 169
Query: 461 GYLAPEYALYGQLTE--KSDVYSFGIVILELMSG 492
Y APE G+ + + DV+S G+++ L+SG
Sbjct: 170 PYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ + L+ +G + + E+EI S +RH N+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD-VAKGLAYLHY 410
KR +L+ +F P G L L + QR ++ +A L Y H
Sbjct: 82 YFHDR-----KRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH- 131
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ + HRDIK N+L+ + + K+ADFG S+ S + GT YL PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEFIREE 530
EK D++ G++ E + G ++ + T+ + N VD F F+ +
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVN---VDLKFPPFL-SD 237
Query: 531 GSRAVMERFVR 541
GS+ ++ + +R
Sbjct: 238 GSKDLISKLLR 248
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 361 GKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRK-KIILDVAKGLAYLHYGLKPAIY 417
G ++V +++ +L D H +T P+R ++I D + L + H I
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQN---GII 138
Query: 418 HRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA--GTYGYLAPEYALYGQLTE 475
HRD+K NI++ + KV DFG+A+ + + +T A GT YL+PE A +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 476 KSDVYSFGIVILELMSG 492
+SDVYS G V+ E+++G
Sbjct: 199 RSDVYSLGCVLYEVLTG 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI-----NEVEIISKIRHRNLLSLR 350
+G GA G V DG A I L E E+ ++ +RH N++ L
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL- 89
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
V + DE Y MP +G + + ++L + + ++ + KGL Y+H
Sbjct: 90 -LDVFTPDETLDDFTDFYLVMPF--MGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL- 469
I HRD+K N+ ++ + + K+ DFGLA+Q+ S + V T Y APE L
Sbjct: 147 A---GIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMXGXVV-TRWYRAPEVILN 199
Query: 470 YGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
+ + T+ D++S G ++ E+++G+ + + S+
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ + L+ +G + + E+EI S +RH N+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD-VAKGLAYLHY 410
KR +L+ +F P G L L + QR ++ +A L Y H
Sbjct: 82 YFHDR-----KRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH- 131
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ + HRDIK N+L+ + + K+ADFG S+ S + GT YL PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEFIREE 530
EK D++ G++ E + G ++ + T+ + N VD F F+ +
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVN---VDLKFPPFL-SD 237
Query: 531 GSRAVMERFVR 541
GS+ ++ + +R
Sbjct: 238 GSKDLISKLLR 248
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ + L+ +G + + E+EI S +RH N+L +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD-VAKGLAYLHY 410
KR +L+ +F P G L L + QR ++ +A L Y H
Sbjct: 83 YFHDR-----KRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH- 132
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
+ + HRDIK N+L+ + + K+ADFG S+ S + GT YL PE
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEFIREE 530
EK D++ G++ E + G ++ + T+ + N VD F F+ +
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVN---VDLKFPPFL-SD 238
Query: 531 GSRAVMERFVR 541
GS+ ++ + +R
Sbjct: 239 GSKDLISKLLR 249
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 33/226 (14%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + ++GQGA G V K D A+K+I + K ++EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVXLLASLNHQYVVR 66
Query: 349 LRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRKKII 398
+ + +K F+ ++ + +L D H N ++ W ++
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK-------------QS 445
+ + L+Y+H I HR++K NI +D K+ DFGLAK Q+
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 446 LEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 490
L G S T GT Y+A E G EK D YS GI+ E +
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 136
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 137 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 191
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 50 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 102
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 103 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 154
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
LH + + HRD+K N+ L+ +++ K+ DFGLA + +E + GT Y+APE
Sbjct: 155 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEV 210
Query: 468 ALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 78
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 79 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 130
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
LH + + HRD+K N+ L+ +++ K+ DFGLA + +E + GT Y+APE
Sbjct: 131 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEV 186
Query: 468 ALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 39/230 (16%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 338 ISKI-RHRNLLSLRG--------------CCVSSDDEKGKRRFLVYDFMPSGSLGDHISN 382
+S + +H N+++L G CC +R+ V + P+ ++ + S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN--ST 160
Query: 383 ALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA 442
A TR L + + VA+G+A+L K I HRD+ + N+LL + AK+ DFGLA
Sbjct: 161 ASTRDLLHFSSQ------VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 443 KQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + +++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 361 GKRRFLVYDFMPSGSLGD--HISNALTRKQLAWPQRK-KIILDVAKGLAYLHYGLKPAIY 417
G ++V +++ +L D H +T P+R ++I D + L + H + I
Sbjct: 105 GPLPYIVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSH---QNGII 155
Query: 418 HRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA--GTYGYLAPEYALYGQLTE 475
HRD+K NI++ + KV DFG+A+ + + +T A GT YL+PE A +
Sbjct: 156 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 215
Query: 476 KSDVYSFGIVILELMSG 492
+SDVYS G V+ E+++G
Sbjct: 216 RSDVYSLGCVLYEVLTG 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISK 340
AT + IG GA G VYK G VA+K + G+E + EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 341 IR---HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+ H N++ L C +S ++ + LV++ + L ++ A L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKA-PPPGLPAETIKDL 117
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ +GL +LH I HRD+K NIL+ S K+ADFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALDPVV 172
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
T Y APE L D++S G + E+ RK L NS
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
GGF++ I + V+ G + +L+ L E+ E+ I + H++++
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAHQHVV 104
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G +D F+V + SL + RK L P+ + + + G Y
Sbjct: 105 GFHGFFEDND-----FVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQY 156
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
LH + + HRD+K N+ L+ +++ K+ DFGLA + +E + GT Y+APE
Sbjct: 157 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEV 212
Query: 468 ALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + DV+S G ++ L+ G+ ETS
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 29/223 (13%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 338 ISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI---SNALTRKQLAWPQ 393
+S + +H N+++L G C G ++ ++ G L + + + A K+ P
Sbjct: 95 MSHLGQHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 394 RKKIIL----DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQ 449
+ +L VA+G+A+L K I HRD+ + N+LL + AK+ DFGLA+ +
Sbjct: 150 ELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 450 SHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 386 RKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQ 444
RK + P+ + + +G+ YLH + HRD+K N+ L+ +M K+ DFGLA K
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+G+ T + GT Y+APE + + D++S G ++ L+ G+ ETS
Sbjct: 193 EFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 21/204 (10%)
Query: 296 IGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
+G GA G V K T + + +K+ + T ++EV ++ ++ H N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
E + +LV + G L D I + R++ + I+ V G YLH
Sbjct: 72 FF-----EDKRNYYLVMEVYRGGELFDEI---ILRQKFSEVDAAVIMKQVLSGTTYLH-- 121
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
K I HRD+K N+LL+S+ + K+ DFGL+ E + R+ Y Y+APE
Sbjct: 122 -KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGKMKERLGTAY-YIAPE-V 177
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
L + EK DV+S G+++ L+ G
Sbjct: 178 LRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISK 340
AT + IG GA G VYK G VA+K + G+E + EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 341 IR---HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+ H N++ L C +S ++ + LV++ + L ++ A L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKA-PPPGLPAETIKDL 117
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ +GL +LH I HRD+K NIL+ S K+ADFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALFPVV 172
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
T Y APE L D++S G + E+ RK L NS
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 17/225 (7%)
Query: 286 ATGGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF-----INEVEIIS 339
AT + IG GA G VYK G VA+K + + G + EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 340 KIR---HRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKK 396
++ H N++ L C +S ++ + LV++ + L ++ A L K
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKA-PPPGLPAETIKD 124
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRV 456
++ +GL +LH I HRD+K NIL+ S K+ADFGLA+ + T V
Sbjct: 125 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALTPV 179
Query: 457 AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNS 501
T Y APE L D++S G + E+ RK L NS
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ K + I+ E+ ++ ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS----KPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 205
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 261
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 262 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 386 RKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS 445
RK + P+ + + +G+ YLH + HRD+K N+ L+ +M K+ DFGLA +
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATK- 191
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+E + GT Y+APE + + D++S G ++ L+ G+ ETS
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 29/223 (13%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 338 ISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI---SNALTRKQLAWPQ 393
+S + +H N+++L G C G ++ ++ G L + + + A K+ P
Sbjct: 103 MSHLGQHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 394 RKKIIL----DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQ 449
+ +L VA+G+A+L K I HRD+ + N+LL + AK+ DFGLA+ +
Sbjct: 158 ELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 450 SHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++MP G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYMPGGDMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + KVADFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++MP G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYMPGGDMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + KVADFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK I T L++ ++ EV I+ + H N++ L E K +LV +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVME 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G T G+ Y APE G+ + + DV+S G+++
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK I T L++ ++ EV I+ + H N++ L E K +LV +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVME 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G T G+ Y APE G+ + + DV+S G+++
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 290 FSQKNLIGQGASGVVYKG-TLEDGTLVAVKQIT-DLDTKGDEEFINEVEIISKIRHRNLL 347
F Q +G G VYKG G VA+K++ D + I E+ ++ +++H N++
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
L + + + LV++FM + D + T + L K + +GL
Sbjct: 67 RLYDVIHTEN-----KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
A+ H + I HRD+K N+L++ + K+ DFGLA+ + ++ V T Y AP
Sbjct: 122 AFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 466 EYALYGQLTEKS--DVYSFGIVILELMSGRKVLETSN 500
+ L G T + D++S G ++ E+++G+ + +N
Sbjct: 178 D-VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
IG GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 198
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 254
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLR 350
IGQG G V+K + G VA+K++ + K E F + E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 351 GCCVSSDDEKGKRR---FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
C + + + +LV+DF L +SN L + L+ + K+++ + GL Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSH---LTTRVAGTYGYL 463
+H + I HRD+K+ N+L+ + K+ADFGLA+ SL S RV T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 464 APEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
PE L YG D++ G ++ E+ + +++ + L
Sbjct: 197 PPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 296 IGQGASGVVYKGT--LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIR---HRNL 346
IG+GA G V+K G VA+K++ G+E I EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR-------KKIIL 399
+ L C S ++ + LV++ H+ LT P+ K ++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFE---------HVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ +GL +LH + HRD+K NIL+ S + K+ADFGLA+ + T V T
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVT 182
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
Y APE L D++S G + E+ + + S+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 127
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 131
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 30/230 (13%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLR 350
IGQG G V+K + G VA+K++ + K E F + E++I+ ++H N+++L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 82
Query: 351 GCCVSSDDEKGKRR---FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
C + + + +LV+DF L +SN L + L+ + K+++ + GL Y
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYY 139
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSH---LTTRVAGTYGYL 463
+H + I HRD+K+ N+L+ + K+ADFGLA+ SL S RV T Y
Sbjct: 140 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 195
Query: 464 APEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLIT 507
PE L YG D++ G ++ E+ + +++ T LI+
Sbjct: 196 PPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRH 343
+ + K +G+GA VV + + L +I + L + ++ E I K++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++ L ++ +LV+D + G L + I + R+ + I + +
Sbjct: 64 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILE 115
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTY 460
+AY H I HR++K N+LL S+ K K+ADFGLA + S AGT
Sbjct: 116 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAGTP 170
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GYL+PE ++ D+++ G+++ L+ G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQIT--DLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+GA VV + + G A K I L + ++ E I ++H N++ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH-- 87
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S E+G +L++D + G L + I + R+ + I + + + + H
Sbjct: 88 --DSISEEG-HHYLIFDLVTGGELFEDI---VAREYYSEADASHCIQQILEAVLHCH--- 138
Query: 413 KPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
+ + HRD+K N+LL S++K K+ADFGLA + +EG+ AGT GYL+PE
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQI---TDLDTKG-DEEFINEVEIISKIRHRNLLSLRG 351
+G+G G VY + + ++ + ++ +G + + E+EI + + H N+L L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD-VAKGLAYLHY 410
+R +L+ ++ P G L + + T + QR I++ +A L Y H
Sbjct: 91 YFYDR-----RRIYLILEYAPRGELYKELQKSCTFDE----QRTATIMEELADALMYCH- 140
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
G K + HRDIK N+LL + + K+ADFG S+ S + GT YL PE
Sbjct: 141 GKK--VIHRDIKPENLLLGLKGELKIADFGW---SVHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 471 GQLTEKSDVYSFGIVILELMSGRKVLETSNSS 502
EK D++ G++ EL+ G E+++ +
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHN 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 386 RKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS 445
RK + P+ + + +G+ YLH + HRD+K N+ L+ +M K+ DFGLA +
Sbjct: 120 RKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATK- 175
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+E + GT Y+APE + + D++S G ++ L+ G+ ETS
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 199
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 296 IGQGASGVVYKGT--LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIR---HRNL 346
IG+GA G V+K G VA+K++ G+E I EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR-------KKIIL 399
+ L C S ++ + LV++ H+ LT P+ K ++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFE---------HVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ +GL +LH + HRD+K NIL+ S + K+ADFGLA+ + T V T
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVT 182
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
Y APE L D++S G + E+ + + S+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRH 343
+ + K +G+GA VV + + L +I + L + ++ E I K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++ L ++ +LV+D + G L + I + R+ + I + +
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILE 116
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTY 460
+AY H I HR++K N+LL S+ K K+ADFGLA + S AGT
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAGTP 171
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GYL+PE ++ D+++ G+++ L+ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 127
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 30/230 (13%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLR 350
IGQG G V+K + G VA+K++ + K E F + E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 351 GCCVSSDDEKGKRR---FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
C + + + +LV+DF L +SN L + L+ + K+++ + GL Y
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSH---LTTRVAGTYGYL 463
+H + I HRD+K+ N+L+ + K+ADFGLA+ SL S RV T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 464 APEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLIT 507
PE L YG D++ G ++ E+ + +++ T LI+
Sbjct: 197 PPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 386 RKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS 445
RK + P+ + + +G+ YLH + HRD+K N+ L+ +M K+ DFGLA +
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATK- 191
Query: 446 LEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETS 499
+E + GT Y+APE + + D++S G ++ L+ G+ ETS
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+GA VV + + T +I + L + ++ E I ++H N++ L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH-- 96
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S E+G +LV+D + G L + I + R+ + I + + + ++H
Sbjct: 97 --DSISEEG-FHYLVFDLVTGGELFEDI---VAREYYSEADASHCIHQILESVNHIH--- 147
Query: 413 KPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
+ I HRD+K N+LL S+ K K+ADFGLA + ++G+ AGT GYL+PE
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 207 KDPYGKPVDIWACGVILYILLVG 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 23/234 (9%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHR 344
+ Q IG GA G+V + L G VAVK+++ + + E+ ++ + H+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 345 NLLSLRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++SL E+ + +LV + M +L I L +++++ ++ +
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQMLC 135
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
G+ +LH I HRD+K +NI++ S+ K+ DFGLA+ + + + T T Y
Sbjct: 136 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYR 190
Query: 464 APEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSG 517
APE L E D++S G ++ EL+ G + + ++ I W ++ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH----IDQWNKVIEQLG 240
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 137
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 287 TGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRH 343
+ + K +G+GA VV + + L +I + L + ++ E I K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++ L ++ +LV+D + G L + I + R+ + I + +
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILE 116
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTY 460
+AY H I HR++K N+LL S+ K K+ADFGLA + S AGT
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAGTP 171
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GYL+PE ++ D+++ G+++ L+ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 127
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 131
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 296 IGQGASGVVYKGT--LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIR---HRNL 346
IG+GA G V+K G VA+K++ G+E I EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR-------KKIIL 399
+ L C S ++ + LV++ H+ LT P+ K ++
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFE---------HVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ +GL +LH + HRD+K NIL+ S + K+ADFGLA+ + T V T
Sbjct: 128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVT 182
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
Y APE L D++S G + E+ + + S+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 30/230 (13%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLR 350
IGQG G V+K + G VA+K++ + K E F + E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 351 GCCVSSDDEKGKRR---FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
C + + + +LV+DF L +SN L + L+ + K+++ + GL Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSH---LTTRVAGTYGYL 463
+H + I HRD+K+ N+L+ + K+ADFGLA+ SL S RV T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYR 196
Query: 464 APEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLE--TSNSSFLLIT 507
PE L YG D++ G ++ E+ + +++ T LI+
Sbjct: 197 PPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVY----KGTLEDGTLVAVKQITDLDTKGDEEFI 332
W S D + F ++ +G+GA+ +VY KGT + L +K+ D +
Sbjct: 42 WIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVR 96
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+ ++ ++ H N++ L+ E LV + + G L D I +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIF-----ETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS---EMKAKVADFGLAKQSLEGQ 449
K IL+ +AYLH + I HRD+K N+L + + K+ADFGL+K +E Q
Sbjct: 152 DAVKQILE---AVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK-IVEHQ 204
Query: 450 SHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+ T V GT GY APE + D++S GI+ L+ G
Sbjct: 205 VLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 296 IGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGD--EEFINEVEIISKIRHRNLLS 348
+G G+ GVV +G + VAVK + D+ ++ + ++FI EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L G ++ + +V + P GSL D + L R + VA+G+ YL
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL 137
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH--LTTRVAGTYGYLAPE 466
HRD+ + N+LL + K+ DFGL + + H + + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ SD + FG+ + E+ +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 204
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 260
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 261 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 145 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 197
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 198 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 189
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 245
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 136
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 137 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 191
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 195
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 251
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 252 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 161 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 213
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 269
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 270 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 288 GGFSQKNLIGQGA-SGVVYKGTLEDGTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHR 344
G + + IG+G + V + G VAVK I T L+ ++ EV I+ + H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAK 403
N++ L E K +LV ++ G + D+ +++ +++ A + ++I+
Sbjct: 75 NIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----S 125
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
+ Y H + I HRD+K+ N+LLD +M K+ADFG + + G T G+ Y
Sbjct: 126 AVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYA 180
Query: 464 APEYALYGQLTE--KSDVYSFGIVILELMSG 492
APE G+ + + DV+S G+++ L+SG
Sbjct: 181 APE-LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 198
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 254
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 181
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 182 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 236
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 192
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 149 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 201
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 202 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 83
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 84 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 139 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 191
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 247
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 248 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 292
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 138 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 190
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 246
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 247 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 142
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 143 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 197
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + + +T VA T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVA-TRWYRAPEI 200
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 256
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 296 IGQGASGVVYKGT-LEDGTLVAVKQIT--DLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
IG+GA VV + L G A K I L + ++ E I ++H N++ L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH-- 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S E+G +LV+D + G L + I + R+ + I + + + + H
Sbjct: 70 --DSISEEG-FHYLVFDLVTGGELFEDI---VAREYYSEADASHCIQQILEAVLHCH--- 120
Query: 413 KPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
+ + HRD+K N+LL S+ K K+ADFGLA + ++G AGT GYL+PE
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 180 KEAYGKPVDIWACGVILYILLVG 202
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 198
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 254
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 205
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 261
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 262 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 84
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 85 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 140 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 192
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 248
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 249 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 293
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 205
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 261
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 262 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 199
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 285 QATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKI-RH 343
Q T G+ K IG G+ V + + + +I D K + E+EI+ + +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID---KSKRDPTEEIEILLRYGQH 75
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N+++L+ DD GK ++V + M G L D I L +K + + ++ + K
Sbjct: 76 PNIITLKDVY---DD--GKYVYVVTELMKGGELLDKI---LRQKFFSEREASAVLFTITK 127
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEM----KAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ YLH + HRD+K +NIL E ++ DFG AKQ L ++ L T
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMTPCYT 183
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++APE D++S G+++ +++G
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 160 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 212
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 268
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 269 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 198
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 254
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 255 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 200
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 256
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + + +T VA T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVA-TRWYRAPEI 200
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 256
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 192
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 164 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 216
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 272
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 273 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRGC 352
+G GA G VYK ++ +++A ++ +DTK +EE ++ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
++ +++ +F G++ D + L R L Q + + L YLH
Sbjct: 103 FYYENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN- 154
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRD+K+ NIL + K+ADFG++ ++ + + GT ++APE +
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCET 211
Query: 473 LTE-----KSDVYSFGIVILEL 489
+ K+DV+S GI ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 138 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 190
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 246
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 247 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 148 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 200
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 201 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 195
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 251
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 252 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAV+ I T L++ ++ EV I+ + H N++ L E K +LV +
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVME 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G T G+ Y APE G+ + + DV+S G+++
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 197 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 249
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 250 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 189
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 245
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 246 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 199
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + + +T VA T Y APE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVA-TRWYRAPEI 200
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 256
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRGC 352
+G GA G VYK ++ +++A ++ +DTK +EE ++ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
++ +++ +F G++ D + L R L Q + + L YLH
Sbjct: 103 FYYENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN- 154
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRD+K+ NIL + K+ADFG++ ++ + + GT ++APE +
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCET 211
Query: 473 LTE-----KSDVYSFGIVILEL 489
+ K+DV+S GI ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 70
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 71 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 121
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + T GT YLAP
Sbjct: 122 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 177
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 160 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 212
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 268
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 269 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 195
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 251
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 252 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLRG 351
IG+G GVVYK G A+K+I K DE I E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR------KQLAWPQRKKIILDVAKGL 405
+ KR LV++ H+ L + L K +L + G+
Sbjct: 68 VIHTK-----KRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
AY H + HRD+K N+L++ E + K+ADFGLA+ T V T Y AP
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 466 EYALYG--QLTEKSDVYSFGIVILELMSG 492
+ L G + + D++S G + E+++G
Sbjct: 170 D-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 161 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 213
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 269
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 270 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLRG 351
IG+G GVVYK G A+K+I K DE I E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR------KQLAWPQRKKIILDVAKGL 405
+ KR LV++ H+ L + L K +L + G+
Sbjct: 68 VIHTK-----KRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
AY H + HRD+K N+L++ E + K+ADFGLA+ T V T Y AP
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 466 EYALYG--QLTEKSDVYSFGIVILELMSG 492
+ L G + + D++S G + E+++G
Sbjct: 170 D-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 195
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 251
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 252 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 204
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 260
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 261 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 199
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 255
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 256 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 68 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + T GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAV+ I T L++ ++ EV I+ + H N++ L E K +LV +
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVME 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G G+ Y APE G+ + + DV+S G+++
Sbjct: 147 DADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y L+ VA+K+++ + + E+ ++ + H+N++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + +LV + M +L I L +++++ ++ + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 181
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 182 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 236
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 199
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 255
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 256 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 68 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + T GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK I T L++ ++ EV I+ + H N++ L E K +LV +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVME 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G G Y APE G+ + + DV+S G+++
Sbjct: 147 DADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITD---LDTKGDEEFINEVEIISKIRHRNL 346
+ K +G+GA VV + + L +I + L + ++ E I K++H N+
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
+ L ++ +LV+D + G L + I + R+ + I + + +A
Sbjct: 91 VRLHDSI-----QEESFHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILESIA 142
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
Y H I HR++K N+LL S+ K K+ADFGLA + S AGT GYL
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAGTPGYL 197
Query: 464 APEYALYGQLTEKSDVYSFGIVILELMSG 492
+PE ++ D+++ G+++ L+ G
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + +QL+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKK 208
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 151 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 203
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 259
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 260 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 304
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 36/245 (14%)
Query: 271 PNSGAKWFRESELDQATGGFSQK----NLIGQGASGVV---YKGTLEDGTLVAVKQITDL 323
P +G F EL++ Q+ +G GA G V Y L VAVK+++
Sbjct: 10 PRAG---FYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLS-- 62
Query: 324 DTKGDEEFIN------EVEIISKIRHRNLLSLRGCCV-SSDDEKGKRRFLVYDFMPSGSL 376
+ + I+ E+ ++ ++H N++ L ++ E +LV M
Sbjct: 63 --RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM----- 115
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKV 436
G ++N + + L+ + ++ + +GL Y+H I HRD+K +N+ ++ + + ++
Sbjct: 116 GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRI 172
Query: 437 ADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKV 495
DFGLA+Q+ E +T VA T Y APE L + + D++S G ++ EL+ G+ +
Sbjct: 173 LDFGLARQADE---EMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 496 LETSN 500
S+
Sbjct: 229 FPGSD 233
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEF----INEVEIISKIRHRNLLSLRG 351
IG+G GVVYK G A+K+I K DE I E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL--EKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR------KQLAWPQRKKIILDVAKGL 405
+ KR LV++ H+ L + L K +L + G+
Sbjct: 68 VIHTK-----KRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
AY H + HRD+K N+L++ E + K+ADFGLA+ T + T Y AP
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAP 169
Query: 466 EYALYG--QLTEKSDVYSFGIVILELMSG 492
+ L G + + D++S G + E+++G
Sbjct: 170 D-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRGC 352
+G GA G VYK ++ +++A ++ +DTK +EE ++ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
++ +++ +F G++ D + L R L Q + + L YLH
Sbjct: 103 FYYENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN- 154
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
I HRD+K+ NIL + K+ADFG++ ++ + GT ++APE +
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCET 211
Query: 473 LTE-----KSDVYSFGIVILEL 489
+ K+DV+S GI ++E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 199
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 255
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 256 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 199
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 255
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 256 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 296 IGQGASGVVYKGTL-EDGTLVAVKQITDLDTKGDEEFI-NEVEIISKIRH-RNLLSLRGC 352
+G G G V+K + G ++AVKQ+ K + + I +++++ K ++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKGLAYLHY 410
+++ D F+ + M G+ + + R Q P+R K+ + + K L YL
Sbjct: 93 FITNTDV-----FIAMELM--GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
K + HRD+K +NILLD + K+ DFG++ + ++ ++ R AG Y+APE
Sbjct: 143 --KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDP 198
Query: 471 GQLTE-----KSDVYSFGIVILELMSGRKVLETSNSSFLLIT 507
T+ ++DV+S GI ++EL +G+ + + F ++T
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 ALYG-QLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 338 ISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVY----DFM----PSGSLGDHISNALTRKQ 388
+S + +H N+++L G C + Y +F+ P G + + +Q
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG 448
L+ VA+G+A+L K I HRD+ + N+LL + AK+ DFGLA+ +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 449 QSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + +L + +I + +GL Y
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 189
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 245
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 246 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 141 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 193
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 194 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E +I++K+ R ++SL + D LV M G + HI N + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRYHIYN-VDEDNPGFQE 288
Query: 394 RKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH 451
+ I + GL +LH + I +RD+K N+LLD + +++D GLA + GQ+
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 452 LTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E +I++K+ R ++SL + D LV M G + HI N + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRYHIYN-VDEDNPGFQE 288
Query: 394 RKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH 451
+ I + GL +LH + I +RD+K N+LLD + +++D GLA + GQ+
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 452 LTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGL + + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 39/230 (16%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 338 ISKI-RHRNLLSLRG--------------CCVSSDDEKGKRRFLVYDFMPSGSLGDHISN 382
+S + +H N+++L G CC +R+ V + P+ ++ + S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN--ST 160
Query: 383 ALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA 442
TR L + + VA+G+A+L K I HRD+ + N+LL + AK+ DFGLA
Sbjct: 161 LSTRDLLHFSSQ------VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 443 KQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ + +++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E +I++K+ R ++SL + D LV M G + HI N + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRYHIYN-VDEDNPGFQE 288
Query: 394 RKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH 451
+ I + GL +LH + I +RD+K N+LLD + +++D GLA + GQ+
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 452 LTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 145
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 146 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYRAPEVIL 200
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
E D++S G ++ E++ G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V ++ G +AVK+++ + + I+ E+ ++ ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 114
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + +T VA T Y APE
Sbjct: 170 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA-TRWYRAPEI 222
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVL 496
L + D++S G ++ EL++GR +
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + KVADFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 295 LIGQ-GASGVVYKGTLEDGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLR 350
+IG+ G G VYK ++ +++A ++ +DTK +EE ++ E++I++ H N++ L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
++ +++ +F G++ D + L R L Q + + L YLH
Sbjct: 74 DAFYYENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHD 126
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALY 470
I HRD+K+ NIL + K+ADFG++ ++ GT ++APE +
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 471 GQLTE-----KSDVYSFGIVILEL 489
+ K+DV+S GI ++E+
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E +I++K+ R ++SL + D LV M G + HI N + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRYHIYN-VDEDNPGFQE 288
Query: 394 RKKIIL--DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSH 451
+ I + GL +LH + I +RD+K N+LLD + +++D GLA + GQ+
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 452 LTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 493
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 296 IGQGASGVVY--------KGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRN 345
+G+GA G V K T VAVK + +D K + I+E+E++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 346 LLSLRGCCVSSDD--------EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI 397
+++L G C KG R + P G + + +QL+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
VA+G+ YL K I HRD+ + N+L+ + K+ADFGLA+ H+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKK 208
Query: 458 GTYG-----YLAPEYALYGQL-TEKSDVYSFGIVILELMS 491
T G ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG---TYGYLA 464
+H I HRD+K +N+ ++ + + K+ DFGLA+ H +AG T Y A
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 186
Query: 465 PEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIF 523
PE L + + D++S G ++ EL++GR + ++ I +L G
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAEL 242
Query: 524 DEFIREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
+ I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 296 IGQGASGVVYK------GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
+G+GA VV + G ++ K+++ D + E E I ++H N++ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRLLKHPNIVRL 75
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
S E+G +L++D + G L + I + R+ + I + + + + H
Sbjct: 76 H----DSISEEG-HHYLIFDLVTGGELFEDI---VAREYYSEADASHCIQQILEAVLHCH 127
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
+ + HR++K N+LL S++K K+ADFGLA + +EG+ AGT GYL+PE
Sbjct: 128 ---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFGFAGTPGYLSPE 183
Query: 467 YALYGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG---TYGYLA 464
+H I HRD+K +N+ ++ + + K+ DFGLA+ H +AG T Y A
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 190
Query: 465 PEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIF 523
PE L + + D++S G ++ EL++GR + ++ I +L G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAEL 246
Query: 524 DEFIREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
+ I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 291 SQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
S+ ++G G G V+K G +A K I K EE NE+ +++++ H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI---SNALTRKQLAWPQRKKIILDVAKGLA 406
S +D LV +++ G L D I S LT ++ + +G+
Sbjct: 152 YDAFESKND-----IVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-----ICEGIR 201
Query: 407 YLHYGLKPAIYHRDIKSTNIL-LDSEMKA-KVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
++H + I H D+K NIL ++ + K K+ DFGLA++ + + L GT +LA
Sbjct: 202 HMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARR-YKPREKLKVNF-GTPEFLA 256
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE Y ++ +D++S G++ L+SG
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ D+GLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG---TYGYLA 464
+H I HRD+K +N+ ++ + + K+ DFGLA+ H +AG T Y A
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 190
Query: 465 PEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIF 523
PE L + + D++S G ++ EL++GR + ++ I +L G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAEL 246
Query: 524 DEFIREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
+ I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 33/238 (13%)
Query: 278 FRESELDQATGGFSQK----NLIGQGASGVV---YKGTLEDGTLVAVKQITDLDTKGDEE 330
F EL++ Q+ +G GA G V Y L VAVK+++ + +
Sbjct: 6 FYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLS----RPFQS 59
Query: 331 FIN------EVEIISKIRHRNLLSLRGCCV-SSDDEKGKRRFLVYDFMPSGSLGDHISNA 383
I+ E+ ++ ++H N++ L ++ E +LV M G ++N
Sbjct: 60 LIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-----GADLNNI 114
Query: 384 LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK 443
+ + L+ + ++ + +GL Y+H I HRD+K +N+ ++ + + ++ DFGLA+
Sbjct: 115 VKCQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR 171
Query: 444 QSLEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
Q+ E +T VA T Y APE L + + D++S G ++ EL+ G+ + S+
Sbjct: 172 QADE---EMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTL--EDGTLV--AVKQI-TDLDTKGD-EEFINEVEIISKIRH 343
F+ ++G+G G V + L EDG+ V AVK + D+ D EEF+ E + + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 344 RNLLSLRGCCVSSDDEKGKRRF----LVYDFMPSGSLGDHI-SNALTRKQLAWPQRK--K 396
++ L G + S + K R ++ FM G L + ++ + P + +
Sbjct: 85 PHVAKLVGVSLRS---RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRV 456
++D+A G+ YL HRD+ + N +L +M VADFGL+++ G +
Sbjct: 142 FMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 457 AG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ +LA E T SDV++FG+ + E+M+
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ +IRH N+++L + D L+ + + G L D ++ + +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTE 114
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
Q K ILD G+ YLH I H D+K NI LLD + + K+ DFG+A +
Sbjct: 115 DEATQFLKQILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 36/245 (14%)
Query: 271 PNSGAKWFRESELDQATGGFSQK----NLIGQGASGVV---YKGTLEDGTLVAVKQITDL 323
P +G F EL++ Q+ +G GA G V Y L VAVK+++
Sbjct: 10 PRAG---FYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLS-- 62
Query: 324 DTKGDEEFIN------EVEIISKIRHRNLLSLRGCCV-SSDDEKGKRRFLVYDFMPSGSL 376
+ + I+ E+ ++ ++H N++ L ++ E +LV M
Sbjct: 63 --RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM----- 115
Query: 377 GDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKV 436
G ++N + + L+ + ++ + +GL Y+H I HRD+K +N+ ++ + + ++
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRI 172
Query: 437 ADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKV 495
DFGLA+Q+ E +T VA T Y APE L + + D++S G ++ EL+ G+ +
Sbjct: 173 LDFGLARQADE---EMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 496 LETSN 500
S+
Sbjct: 229 FPGSD 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 296 IGQGASGVVYK-GTLEDGTLVAVKQIT--DLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+GA VV + + G A K I L + ++ E I ++H N++ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH-- 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S E+G +LV+D + G L + I + R+ + I + + + + H
Sbjct: 70 --DSISEEG-FHYLVFDLVTGGELFEDI---VAREYYSEADASHCIQQILESVNHCHLN- 122
Query: 413 KPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K N+LL S+ K K+ADFGLA + ++G AGT GYL+PE
Sbjct: 123 --GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ +IRH N+++L + D L+ + + G L D ++ + +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTE 107
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
Q K ILD G+ YLH I H D+K NI LLD + + K+ DFG+A +
Sbjct: 108 DEATQFLKQILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 162 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ +IRH N+++L + D L+ + + G L D ++ + +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTE 128
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
Q K ILD G+ YLH I H D+K NI LLD + + K+ DFG+A +
Sbjct: 129 DEATQFLKQILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 183 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DFGLA+ + + VA T Y APE
Sbjct: 161 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMXGXVA-TRWYRAPEI 213
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 269
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 270 ISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 296 IGQGASGVVYK-GTLEDGTLVAVKQIT--DLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+GA VV + + G A K I L + ++ E I ++H N++ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH-- 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S E+G +LV+D + G L + I + R+ + I + + + + H
Sbjct: 70 --DSISEEG-FHYLVFDLVTGGELFEDI---VAREYYSEADASHCIQQILESVNHCHLN- 122
Query: 413 KPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K N+LL S+ K K+ADFGLA + ++G AGT GYL+PE
Sbjct: 123 --GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ D+++ G+++ L+ G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 33/286 (11%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPE 466
+H I HRD+K +N+ ++ + + K+ DFGLA+ + E ++ TR Y APE
Sbjct: 164 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPE 215
Query: 467 YAL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDE 525
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLK 271
Query: 526 FIREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 272 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 68 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAP 174
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L+ +VA ++ + E ++ RH L
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRHPFL 213
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ R + ++ L
Sbjct: 214 TALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSAL 264
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + + +RD+K N++LD + K+ DFGL K+ ++ + + T GT YLAP
Sbjct: 265 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAP 321
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L+ +VA ++ + E ++ RH L
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRHPFL 210
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ R + ++ L
Sbjct: 211 TALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSAL 261
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + + +RD+K N++LD + K+ DFGL K+ ++ + + T GT YLAP
Sbjct: 262 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAP 318
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 72
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 73 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 123
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + GT YLAP
Sbjct: 124 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAP 179
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 68 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAP 174
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VA+K I T L+ ++ EV I+ + H N++ L E K +L+ +
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIME 91
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 92 YASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QKRIVHRDLKAENLLL 144
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G L T G+ Y APE G+ + + DV+S G+++
Sbjct: 145 DADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 201
Query: 487 LELMSG 492
L+SG
Sbjct: 202 YTLVSG 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L ++A ++ + E ++ RH L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTRHPFL 67
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ +R + ++ L
Sbjct: 68 TALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIVSAL 118
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + +RDIK N++LD + K+ DFGL K+ + + + GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAP 174
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 192
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 281 SELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD-----------E 329
+EL ++ + I G+ G V G +G VA+K++ + + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 330 EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQL 389
+ E+ +++ H N+L LR V ++ + +LV + M + L I + ++ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD---QRIV 130
Query: 390 AWPQR-KKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSL-- 446
PQ + + + GL LH + + HRD+ NILL + DF LA++
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 447 EGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVL 496
++H T Y APE + + T+ D++S G V+ E M RK L
Sbjct: 188 ANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKAL 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 148
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 149 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 203
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 281 SELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGD-----------E 329
+EL ++ + I G+ G V G +G VA+K++ + + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 330 EFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQL 389
+ E+ +++ H N+L LR V ++ + +LV + M + L I + ++ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD---QRIV 130
Query: 390 AWPQR-KKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSL-- 446
PQ + + + GL LH + + HRD+ NILL + DF LA++
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 447 EGQSHLTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVL 496
++H T Y APE + + T+ D++S G V+ E M RK L
Sbjct: 188 ANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKAL 233
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 334 EVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ + +H N+++L+ DD GK +LV + M G L D I L +K +
Sbjct: 70 EIEILLRYGQHPNIITLKDV---YDD--GKHVYLVTELMRGGELLDKI---LRQKFFSER 121
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA----KVADFGLAKQSLEG 448
+ ++ + K + YLH + HRD+K +NIL E ++ DFG AKQ L
Sbjct: 122 EASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRA 177
Query: 449 QSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ L T ++APE E D++S GI++ +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 295 LIGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGDEEFINEVEIISKIRHRNLLSL 349
++G+G G VY+G + VAVK D E+F++E I+ + H +++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS---NALTRKQLAWPQRKKIILDVAKGLA 406
G + + +++ + P G LG ++ N+L L L + K +A
Sbjct: 75 IGII------EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS-----LQICKAMA 123
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YL HRDI NIL+ S K+ DFGL++ + + + +++PE
Sbjct: 124 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ + T SDV+ F + + E++S
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 19 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 77
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ + +
Sbjct: 78 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKN 128
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K +++
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 19 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 77
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ + +
Sbjct: 78 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKN 128
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K +++
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 295 LIGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGDEEFINEVEIISKIRHRNLLSL 349
++G+G G VY+G + VAVK D E+F++E I+ + H +++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS---NALTRKQLAWPQRKKIILDVAKGLA 406
G + + +++ + P G LG ++ N+L L L + K +A
Sbjct: 91 IGII------EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS-----LQICKAMA 139
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YL HRDI NIL+ S K+ DFGL++ + + + +++PE
Sbjct: 140 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ + T SDV+ F + + E++S
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 17 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 75
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ + +
Sbjct: 76 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKN 126
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K +++
Sbjct: 127 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 295 LIGQGASGVVYKGTLE----DGTLVAVKQIT-DLDTKGDEEFINEVEIISKIRHRNLLSL 349
++G+G G VY+G + VAVK D E+F++E I+ + H +++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS---NALTRKQLAWPQRKKIILDVAKGLA 406
G + + +++ + P G LG ++ N+L L L + K +A
Sbjct: 79 IGII------EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS-----LQICKAMA 127
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
YL HRDI NIL+ S K+ DFGL++ + + + +++PE
Sbjct: 128 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 467 YALYGQLTEKSDVYSFGIVILELMS 491
+ + T SDV+ F + + E++S
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 334 EVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ + +H N+++L+ DD GK +LV + M G L D I L +K +
Sbjct: 70 EIEILLRYGQHPNIITLKDV---YDD--GKHVYLVTELMRGGELLDKI---LRQKFFSER 121
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA----KVADFGLAKQSLEG 448
+ ++ + K + YLH + HRD+K +NIL E ++ DFG AKQ L
Sbjct: 122 EASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRA 177
Query: 449 QSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++ L T ++APE E D++S GI++ +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 3 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 61
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ K
Sbjct: 62 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKD---KN 112
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K +++
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 9 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 67
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ K
Sbjct: 68 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKD---KN 118
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K +++
Sbjct: 119 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 44/237 (18%)
Query: 290 FSQKNL-----IGQGASGVVYKGTL-----EDGTL-VAVKQITDLDTKGDEE-FINEVEI 337
F + NL +G GA G V + T ED L VAVK + ++E ++E++I
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 338 ISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHI---SNALTRKQLAWPQ 393
+S + +H N+++L G C G ++ ++ G L + + + A+ LA P
Sbjct: 88 MSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLA-PG 141
Query: 394 RKKIILD------------------VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAK 435
+ LD VA+G+A+L K I HRD+ + N+LL + AK
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAK 198
Query: 436 VADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ DFGLA+ + +++ A ++APE T +SDV+S+GI++ E+ S
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 290 FSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHR 344
+ Q IG GA G+V + L G VAVK+++ + + E+ ++ + H+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 345 NLLSLRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++SL E+ + +LV + M +L I L +++++ ++ +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQMLC 137
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
G+ +LH I HRD+K +NI++ S+ K+ DFGLA+ + + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC--TNFMMTPYVVTRYYR 192
Query: 464 APEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
APE L D++S G ++ EL+ G + + ++
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTD 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 9 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 68
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 69 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 115
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 116 VPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 169
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 170 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 225
Query: 491 SG 492
+G
Sbjct: 226 AG 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I + L+ L + + ++V ++
Sbjct: 77 KQKVVKLKQI--------EHTLNEKRIQQAVNFPFLVKLEFSFKDNSN-----LYMVLEY 123
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 124 APGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ KVADFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 178 QGYIKVADFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 491 SG 492
+G
Sbjct: 234 AG 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ FGLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 286 ATGGFSQKNLIGQGASGV--VYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRH 343
+G F +L+ + +SG+ V K +D + V ++QI E+E++ + H
Sbjct: 31 GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE-----------AEIEVLKSLDH 79
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR-KQLAWPQRKKIILDVA 402
N++ + E ++V + G L + I +A R K L+ +++ +
Sbjct: 80 PNIIKIFEVF-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 403 KGLAYLHYGLKPAIYHRDIKSTNILLDS---EMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
LAY H + H+D+K NIL K+ DFGLA + + H +T AGT
Sbjct: 135 NALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEH-STNAAGT 189
Query: 460 YGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
Y+APE +T K D++S G+V+ L++G
Sbjct: 190 ALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 288 GGFSQKNLIGQGASGVVYKGT-LEDGTLVAVKQIT-DLDTKGDEEFINEVEI--ISKIRH 343
G + + +G+G+ G V T + VA+K I+ L K D E EI + +RH
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
+++ L + D +V ++ G L D+I + +K++ + ++ +
Sbjct: 69 PHIIKLYDVITTPTD-----IVMVIEY-AGGELFDYI---VEKKRMTEDEGRRFFQQIIC 119
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
+ Y H + I HRD+K N+LLD + K+ADFGL+ +G T+ G+ Y
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYA 174
Query: 464 APEYALYGQLT--EKSDVYSFGIVILELMSGR 493
APE + G+L + DV+S GIV+ ++ GR
Sbjct: 175 APE-VINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFINEVEIISKIRHRNLLSLR 350
+G G G V KG + +V + L + ++ E + E ++ ++ + ++ +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G C + + LV + G L ++ K +++ V+ G+ YL
Sbjct: 73 GIC------EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE- 122
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYA 468
+ HRD+ + N+LL ++ AK++DFGL+K +++ + G + + APE
Sbjct: 123 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 469 LYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV+SFG+++ E S
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VA+K I T L+ ++ EV I+ + H N++ L E K +L+ +
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIME 94
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QKRIVHRDLKAENLLL 147
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++M K+ADFG + + G G Y APE G+ + + DV+S G+++
Sbjct: 148 DADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 204
Query: 487 LELMSG 492
L+SG
Sbjct: 205 YTLVSG 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFINEVEIISKIRHRNLLSLR 350
+G G G V KG + +V + L + ++ E + E ++ ++ + ++ +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G C + + LV + G L ++ K +++ V+ G+ YL
Sbjct: 75 GIC------EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE- 124
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYA 468
+ HRD+ + N+LL ++ AK++DFGL+K +++ + G + + APE
Sbjct: 125 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 469 LYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV+SFG+++ E S
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 77 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 123
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 124 VPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 178 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 491 SG 492
+G
Sbjct: 234 AG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 77 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 123
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 124 VPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 178 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 491 SG 492
+G
Sbjct: 234 AG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 77 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 123
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 124 VPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 178 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 491 SG 492
+G
Sbjct: 234 AG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 9 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 68
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 69 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 115
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + P + + YLH + +RD+K N+L+D
Sbjct: 116 VPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 169
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 170 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 225
Query: 491 SG 492
+G
Sbjct: 226 AG 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ D GLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLV--AVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
++ +N IG+G+ G V K ++ GT + A K+I + + F E+EI+ + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + D +Y M + G+ + ++ +I+ DV +AY
Sbjct: 87 RLYETFEDNTD--------IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 408 LHYGLKPAIYHRDIKSTNILL-----DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
H K + HRD+K N L DS + K+ DFGLA + G+ + T+V GT Y
Sbjct: 139 CH---KLNVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGK-MMRTKV-GTPYY 191
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++P+ L G + D +S G+++ L+ G
Sbjct: 192 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLV--AVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
++ +N IG+G+ G V K ++ GT + A K+I + + F E+EI+ + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + D +Y M + G+ + ++ +I+ DV +AY
Sbjct: 70 RLYETFEDNTD--------IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 408 LHYGLKPAIYHRDIKSTNILL-----DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGY 462
H K + HRD+K N L DS + K+ DFGLA + G+ + T+V GT Y
Sbjct: 122 CH---KLNVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKM-MRTKV-GTPYY 174
Query: 463 LAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++P+ L G + D +S G+++ L+ G
Sbjct: 175 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 87
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 88 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 139
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWTLCGTPEYLA 192
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 77 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 123
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
P G + H+ + + P + + YLH + +RD+K N+++D
Sbjct: 124 APGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ KV DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 178 QGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 491 SG 492
+G
Sbjct: 234 AG 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 280 ESELDQATGGFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEII 338
E + D + +G GA GVV++ T G A K + E E++ +
Sbjct: 149 EIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 208
Query: 339 SKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII 398
S +RH L++L E ++Y+FM G L + +++ +++ + + +
Sbjct: 209 SVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYM 261
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM--KAKVADFGLAKQSLEGQSHLTTRV 456
V KGL ++H + H D+K NI+ ++ + K+ DFGL QS T
Sbjct: 262 RQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-- 316
Query: 457 AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL--ETSNSSFLLITDWAWMLA 514
GT + APE A + +D++S G++ L+SG E + + + W +
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 515 NSG--KVDEIFDEFIRE 529
+S + E +FIR+
Sbjct: 377 DSAFSGISEDGKDFIRK 393
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 259 EEFVRSFKDSVLPNSGAKWFRESELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLE 310
+EF+ K+ L + + LDQ TG F + L+ +G Y L+
Sbjct: 37 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 96
Query: 311 DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDF 370
+V +KQI E +NE I+ + L+ L + + ++V ++
Sbjct: 97 KQKVVKLKQI--------EHTLNEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEY 143
Query: 371 MPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+P G + H+ + + P + + YLH + +RD+K N+L+D
Sbjct: 144 VPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 197
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
+ +V DFG AK+ ++G+ T + GT YLAPE L + D ++ G++I E+
Sbjct: 198 QGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 491 SG 492
+G
Sbjct: 254 AG 255
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK---GDEEFINEVEIISKIRHRN 345
FS +IG+G G VY D G + A+K + K G+ +NE ++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------ 244
Query: 346 LLSLRGC----CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
L+S C C+S + + D M G L H+S + + ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEI 301
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL ++H + +RD+K NILLD +++D GLA + + H + GT+G
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHG 355
Query: 462 YLAPEYALYGQLTEKS-DVYSFGIVILELMSG 492
Y+APE G + S D +S G ++ +L+ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ DF LA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK---GDEEFINEVEIISKIRHRN 345
FS +IG+G G VY D G + A+K + K G+ +NE ++S
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------ 243
Query: 346 LLSLRGC----CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
L+S C C+S + + D M G L H+S + + ++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEI 300
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL ++H + +RD+K NILLD +++D GLA + + H + GT+G
Sbjct: 301 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHG 354
Query: 462 YLAPEYALYGQLTEKS-DVYSFGIVILELMSG 492
Y+APE G + S D +S G ++ +L+ G
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 280 ESELDQATGGFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEII 338
E + D + +G GA GVV++ T G A K + E E++ +
Sbjct: 43 EIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 102
Query: 339 SKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII 398
S +RH L++L E ++Y+FM G L + +++ +++ + + +
Sbjct: 103 SVLRHPTLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYM 155
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM--KAKVADFGLAKQSLEGQSHLTTRV 456
V KGL ++H + H D+K NI+ ++ + K+ DFGL QS T
Sbjct: 156 RQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-- 210
Query: 457 AGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL--ETSNSSFLLITDWAWMLA 514
GT + APE A + +D++S G++ L+SG E + + + W +
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 515 NSG--KVDEIFDEFIRE 529
+S + E +FIR+
Sbjct: 271 DSAFSGISEDGKDFIRK 287
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 103 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWTLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 290 FSQKNLIGQGASGVVY---KGTLED-GTLVAVKQITDL----DTKGDEEFINEVEIISKI 341
F ++G GA G V+ K + D G L A+K + K E E +++ I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
R L ++ + L+ D++ G L H+S R++ + + + ++
Sbjct: 116 RQSPFLVTLHYAFQTE----TKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEI 168
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
L +LH K I +RDIK NILLDS + DFGL+K+ + ++ GT
Sbjct: 169 VLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 462 YLAPEYALYGQLTEKS--DVYSFGIVILELMSG 492
Y+AP+ G D +S G+++ EL++G
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK---GDEEFINEVEIISKIRHRN 345
FS +IG+G G VY D G + A+K + K G+ +NE ++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------ 244
Query: 346 LLSLRGC----CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
L+S C C+S + + D M G L H+S + + ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEI 301
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL ++H + +RD+K NILLD +++D GLA + + H + GT+G
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHG 355
Query: 462 YLAPEYALYGQLTEKS-DVYSFGIVILELMSG 492
Y+APE G + S D +S G ++ +L+ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTK---GDEEFINEVEIISKIRHRN 345
FS +IG+G G VY D G + A+K + K G+ +NE ++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------ 244
Query: 346 LLSLRGC----CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
L+S C C+S + + D M G L H+S + + ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEI 301
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
GL ++H + +RD+K NILLD +++D GLA + + H + GT+G
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHG 355
Query: 462 YLAPEYALYGQLTEKS-DVYSFGIVILELMSG 492
Y+APE G + S D +S G ++ +L+ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ D GLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 294 NLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLRG 351
L+G+GA V +L++G AVK I EVE + + + ++N+L L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
DD R +LV++ + GS+ HI +K + +++ DVA L +LH
Sbjct: 79 --FFEDD---TRFYLVFEKLQGGSILAHIQK---QKHFNEREASRVVRDVAAALDFLH-- 128
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQS-------HLTTRVAGTYG 461
I HRD+K NIL +S K K+ DF L S LTT G+
Sbjct: 129 -TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP-CGSAE 186
Query: 462 YLAPEY--ALYGQLT---EKSDVYSFGIVILELMSG 492
Y+APE Q T ++ D++S G+V+ ++SG
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 103 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T +AGT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++ P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFIN------EVEIISKIRHRNLLS 348
+G GA G V + G VAVK+++ + + I+ E+ ++ ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 349 LRGCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L + E+ +LV M G ++N + ++L + +I + +GL Y
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEY 467
+H I HRD+K +N+ ++ + + K+ D GLA+ + +T VA T Y APE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVA-TRWYRAPEI 193
Query: 468 AL-YGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLANSGKVDEIFDEF 526
L + + D++S G ++ EL++GR + ++ I +L G +
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH----IDQLKLILRLVGTPGAELLKK 249
Query: 527 IREEGSRAVMERFVRVGIL-CAHVMVALRPTIADAL-KMLEGDID 569
I E +R ++ ++ + A+V + P D L KML D D
Sbjct: 250 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 312 GTLVAVKQI--TDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYD 369
G VAVK I T L++ ++ EV I + H N++ L E K +LV +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVI-----ETEKTLYLVXE 93
Query: 370 FMPSGSLGDH-ISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ G + D+ +++ +++ A + ++I+ + Y H + I HRD+K+ N+LL
Sbjct: 94 YASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCH---QKFIVHRDLKAENLLL 146
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTE--KSDVYSFGIVI 486
D++ K+ADFG + + G G Y APE G+ + + DV+S G+++
Sbjct: 147 DADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVIL 203
Query: 487 LELMSG 492
L+SG
Sbjct: 204 YTLVSG 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +K+I E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++ P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFGLAK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 279 RESELDQATGGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFIN 333
+E LD+ K L G G G V KG + +V + L + ++ E +
Sbjct: 3 KEVYLDRKLLTLEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 61
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E ++ ++ + ++ + G C + + LV + G L ++ K
Sbjct: 62 EANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKD---KN 112
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 454 TRVAGTY--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGD------EEFINEVEIISKIRHRNLLS 348
+G G VV K + G A K I TK E+ EV I+ +I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L + D L+ + + G L D ++ ++ L + + + + G+ YL
Sbjct: 79 LHEVYENKTD-----VILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYL 130
Query: 409 HYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
H I H D+K NI LLD + + K+ DFGLA + G + GT ++A
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVA 185
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE Y L ++D++S G++ L+SG
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L+ +VA ++ + E ++ RH L
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRHPFL 71
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ R + ++ L
Sbjct: 72 TALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSAL 122
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + + +RD+K N++LD + K+ DFGL K+ ++ + + GT YLAP
Sbjct: 123 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAP 179
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L+ +VA ++ + E ++ RH L
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRHPFL 70
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ R + ++ L
Sbjct: 71 TALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSAL 121
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + + +RD+K N++LD + K+ DFGL K+ ++ + + GT YLAP
Sbjct: 122 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAP 178
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 285 QATGGFSQKNLIGQGASGV----VYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISK 340
Q T G+ K IG G+ V ++K T + AVK I K + E+EI+ +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXE---FAVKIID----KSKRDPTEEIEILLR 71
Query: 341 I-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
+H N+++L+ DD GK ++V + G L D I L +K + + ++
Sbjct: 72 YGQHPNIITLKDVY---DD--GKYVYVVTELXKGGELLDKI---LRQKFFSEREASAVLF 123
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM----KAKVADFGLAKQSLEGQSHLTTR 455
+ K + YLH + HRD+K +NIL E ++ DFG AKQ L ++ L
Sbjct: 124 TITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXT 179
Query: 456 VAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T ++APE D++S G+++ ++G
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + A P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFAEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 288 GGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNL 346
G F + L+ + A+G Y L+ +VA ++ + E ++ RH L
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRHPFL 72
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKII-LDVAKGL 405
+L+ + D R V ++ G L H+S R+++ R + ++ L
Sbjct: 73 TALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSAL 123
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAP 465
YLH + + +RD+K N++LD + K+ DFGL K+ ++ + + GT YLAP
Sbjct: 124 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAP 180
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSGR 493
E D + G+V+ E+M GR
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFIN-----EVEIISKIRH 343
+ + + +G+G VYK ++ +VA+K+I ++ IN E++++ ++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 344 RNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAK 403
N++ L + LV+DFM + N+L L K +L +
Sbjct: 72 PNIIGLLDAFGHKSNIS-----LVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQ 123
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
GL YLH + I HRD+K N+LLD K+ADFGLAK S + T Y
Sbjct: 124 GLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYXHQVVTRWYR 179
Query: 464 APEYALYGQLTEKS-DVYSFGIVILELM 490
APE ++ D+++ G ++ EL+
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
EE EV I+ ++ H N+++L + D L+ + + G L D ++ ++
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTD-----VVLILELVSGGELFDFLAQ---KES 111
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L+ + I + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
+G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + P + +
Sbjct: 103 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++ P G + H+ + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFXEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFINEVEIISKIRHRNLLSLR 350
+G G G V KG + +V + L + ++ E + E ++ ++ + ++ +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G C + + LV + G L ++ + + +++ V+ G+ YL
Sbjct: 437 GIC------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE- 486
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYA 468
+ HRD+ + N+LL ++ AK++DFGL+K +++ + G + + APE
Sbjct: 487 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 469 LYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV+SFG+++ E S
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L L + + ++V ++ P G + H+ + + P + +
Sbjct: 103 FLTKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 296 IGQGASGVV---YKGTLEDGTLVAVKQITD--LDTKGDEEFINEVEIISKIRHRNLLSLR 350
IG GA G+V Y LE VA+K+++ + + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 351 GCCVSSDD-EKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
E+ + ++V + M +L I L +++++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 410 YGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVIL 198
Query: 470 YGQLTEKSDVYSFGIVILELMSGR 493
E D++S G ++ E++ +
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 277 WFRESELDQATGGFSQKNLIGQGASGVVYKGTLEDGT--LVAVK-----QITDLDTKGDE 329
+F+ L + + K IGQG+ GVV + +E+ T + A+K +I ++ K E
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVE 73
Query: 330 EFINEVEIISKIRHRNLLSLRG--------CCVSS---------------DDEKGKRRFL 366
EV ++ K+ H N+ L C V DD GK
Sbjct: 74 RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 367 VY--DFMPSGSLGDHISNALT---RKQLAWPQRKKIILDVAKGL-AYLHYGLKPAIYHRD 420
V P + N R+ L + QR+K+I ++ + + + LHY I HRD
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRD 193
Query: 421 IKSTNILL--DSEMKAKVADFGLAKQSLE---GQSHLTTRVAGTYGYLAPEY-----ALY 470
IK N L + + K+ DFGL+K+ + G+ + T AGT ++APE Y
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY 253
Query: 471 GQLTEKSDVYSFGIVILELMSG 492
G K D +S G+++ L+ G
Sbjct: 254 G---PKCDAWSAGVLLHLLLMG 272
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L L + + ++V ++ P G + H+ + + P + +
Sbjct: 103 FLTKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G + L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEYSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G + L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEYSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E +++S++ H + L C DDEK + + +G L +I + +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCF--QDDEK---LYFGLSYAKNGELLKYIRKIGSFDETC--- 138
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHL 452
+ ++ L YLH I HRD+K NILL+ +M ++ DFG AK S E +
Sbjct: 139 TRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 195
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
GT Y++PE + SD+++ G +I +L++G N +
Sbjct: 196 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 248
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDE-----EFINEVEIISKIRHRNLLSLR 350
+G G G V KG + +V + L + ++ E + E ++ ++ + ++ +
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
G C + + LV + G L ++ + + +++ V+ G+ YL
Sbjct: 438 GIC------EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE- 487
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTY--GYLAPEYA 468
+ HRD+ + N+LL ++ AK++DFGL+K +++ + G + + APE
Sbjct: 488 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 469 LYGQLTEKSDVYSFGIVILELMS 491
Y + + KSDV+SFG+++ E S
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G + L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++P G + H+ + + P + +
Sbjct: 102 FLVKLEYSFKDNSN-----LYMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGD------EEFINEVEIISKIRHRNLLS 348
+G G VV K + G A K I TK E+ EV I+ +I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
L + D L+ + + G L D ++ ++ L + + + + G+ YL
Sbjct: 79 LHEVYENKTD-----VILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYL 130
Query: 409 HYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
H I H D+K NI LLD + + K+ DFGLA + G + GT ++A
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVA 185
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE Y L ++D++S G++ L+SG
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE ++ SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 109
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 296 IGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
+G G +G+V+ D VA+K+I D + + + E++II ++ H N++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 355 SS----DDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
S D+ G L ++ + ++N L + L + + + +GL Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 411 GLKPAIYHRDIKSTNILLDSE-MKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPEY 467
+ HRD+K N+ +++E + K+ DFGLA+ SH G T Y +P
Sbjct: 139 A---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 468 ALY-GQLTEKSDVYSFGIVILELMSGRKVL 496
L T+ D+++ G + E+++G+ +
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E++I+ + H L++L S DE+ F+V D + G L H+ + K+
Sbjct: 65 ELQIMQGLEHPFLVNL---WYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKEET--- 116
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT 453
K I ++ L YL I HRD+K NILLD + DF +A L ++ +T
Sbjct: 117 VKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-LPRETQIT 172
Query: 454 TRVAGTYGYLAPEYALYGQLTEKS---DVYSFGIVILELMSGRKVLETSNSS 502
T +AGT Y+APE + S D +S G+ EL+ GR+ +S+
Sbjct: 173 T-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 76
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 128
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 129 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR-VKGR--- 181
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 102
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L L + + ++V ++ P G + H+ + P + +
Sbjct: 103 FLTKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFXEPHARFYAAQIVLT 154
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + KV DFG AK+ ++G+ T + GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR---TWXLCGTPEYLA 207
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 109
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++ P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +K+I E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V ++ P G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+++D + +V DFGLAK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 296 IGQGASGVVYKGT--LEDGTLVAVKQITDLDTKGDE-EFINEVEIISKIRHRNLLSLRGC 352
+G+G VYKG L D LVA+K+I +G I EV ++ ++H N+++L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 353 CVSSDDEKGKRRFLVYDFMPSG--SLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHY 410
+ K LV++++ D N + + K + + +GLAY H
Sbjct: 69 IHTE-----KSLTLVFEYLDKDLKQYLDDCGNIINMHNV-----KLFLFQLLRGLAYCH- 117
Query: 411 GLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK-QSLEGQSHLTTRVAGTYGYLAPEYAL 469
+ + HRD+K N+L++ + K+ADFGLA+ +S+ +++ V T Y P+ L
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILL 173
Query: 470 YG-QLTEKSDVYSFGIVILELMSGRKVLETS 499
+ + D++ G + E+ +GR + S
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 90
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 142
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 143 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 195
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRG 351
IG G+ G K + DG ++ K++ D + + E ++EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQL---AWPQRKKIILDVAKGLAYL 408
+ D ++V ++ G L I+ +Q + R L +A +
Sbjct: 73 RII---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
+ HRD+K N+ LD + K+ DFGLA+ L + GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 469 LYGQLTEKSDVYSFGIVILEL 489
EKSD++S G ++ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILILELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRG 351
IG G+ G K + DG ++ K++ D + + E ++EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQL---AWPQRKKIILDVAKGLAYL 408
+ D ++V ++ G L I+ +Q + R L +A +
Sbjct: 73 RII---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
+ HRD+K N+ LD + K+ DFGLA+ L + GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 469 LYGQLTEKSDVYSFGIVILEL 489
EKSD++S G ++ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 296 IGQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEE---FINEVEIISKIRHRNLLSLRG 351
IG G+ G K + DG ++ K++ D + + E ++EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQL---AWPQRKKIILDVAKGLAYL 408
+ D ++V ++ G L I+ +Q + R L +A +
Sbjct: 73 RII---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 409 HYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
+ HRD+K N+ LD + K+ DFGLA+ L GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 469 LYGQLTEKSDVYSFGIVILEL 489
EKSD++S G ++ EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFXEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 29/239 (12%)
Query: 270 LPNSGAKW-FRESELDQAT----GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLD 324
LP +KW F L+ G F Q +I A G+ T VAVK + +
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQ--VIEADAFGIDKTATXRT---VAVKMLKEGA 69
Query: 325 TKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISN 382
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++ +
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 383 A---------LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK 433
L + L VAKG+ +L HRD+ + NILL +
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 182
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++ E+ S
Sbjct: 183 VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 244
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 243
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQ 388
E+ EV I+ +I+H N+++L + D L+ + + G L D ++ ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTD-----VILIGELVAGGELFDFLAE---KES 110
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNI-LLDSEM---KAKVADFGLAKQ 444
L + + + + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 445 SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
G + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFXEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEAT 254
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQS 450
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G++
Sbjct: 255 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 309
Query: 451 HLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
L + GT YLAPE + D +S G+++ +SG
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQ 393
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEAT 240
Query: 394 RKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQS 450
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G++
Sbjct: 241 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 295
Query: 451 HLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
L + GT YLAPE + D +S G+++ +SG
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 84
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + P
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFXEP 136
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 137 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 189
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFXEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 29/239 (12%)
Query: 270 LPNSGAKW-FRESELDQAT----GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLD 324
LP +KW F L+ G F Q +I A G+ T VAVK + +
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQ--VIEADAFGIDKTATXRT---VAVKMLKEGA 69
Query: 325 TKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISN 382
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++ +
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 383 A---------LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK 433
L + L VAKG+ +L HRD+ + NILL +
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 182
Query: 434 AKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++ E+ S
Sbjct: 183 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 292 QKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSL 349
Q++++G+GA V L AVK I EVE++ + + HRN+L L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
D R +LV++ M GS+ HI R+ + ++ DVA L +LH
Sbjct: 77 IEFFEEED-----RFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLH 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQ-SLEGQ-SHLTT----RVAGTY 460
I HRD+K NIL + + K+ DFGL L G S ++T G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 461 GYLAPE----YALYGQLTEK-SDVYSFGIVILELMSG 492
Y+APE ++ + +K D++S G+++ L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 110
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + P
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFXEP 162
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 163 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 215
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEA 113
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQ 449
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G+
Sbjct: 114 TCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 168
Query: 450 SHLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
+ L + GT YLAPE + D +S G+++ +SG
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 290 FSQKNLI---GQGASGVVYKGTLE-DGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRN 345
F Q N + + SG ++KG + + +V V ++ D T+ +F E + H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 346 LLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL 405
+L + G C S L+ + P GSL + + T + Q K LD A+G
Sbjct: 69 VLPVLGACQSP---PAPHPTLITHWXPYGSLYNVLHEG-TNFVVDQSQAVKFALDXARGX 124
Query: 406 AYLHYGLKPAIYHRDIKSTNILLDSEMKAKV--ADFGLAKQSLEGQSHLTTRVAGTYGYL 463
A+LH L+P I + S ++ +D + A++ AD + QS G+ + VA
Sbjct: 125 AFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQS-PGRXYAPAWVAPEALQK 182
Query: 464 APEYALYGQLTEKSDVYSFGIVILELMS 491
PE +D +SF +++ EL++
Sbjct: 183 KPE----DTNRRSADXWSFAVLLWELVT 206
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEA 114
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQ 449
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G+
Sbjct: 115 TCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 450 SHLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
+ L + GT YLAPE + D +S G+++ +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEA 114
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQ 449
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G+
Sbjct: 115 TCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 450 SHLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
+ L + GT YLAPE + D +S G+++ +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEA 114
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQ 449
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G+
Sbjct: 115 TCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 169
Query: 450 SHLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
+ L + GT YLAPE + D +S G+++ +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-SLEGQSHLTTRVAG 458
++ L YLH I HRD+K NILL+ +M ++ DFG AK S E + G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 459 TYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
T Y++PE + SD+++ G +I +L++G N +
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF 240
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 290 FSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDLDTK-GDEEFINEVEIISKIRHRNLL 347
F +G+G GVV++ + D A+K+I + + E+ + EV+ ++K+ H ++
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 348 SLRGCCVSSDD----EKGKRRFLVYDFMP---SGSLGDHISNALTRKQLAWPQRKKIILD 400
+ + + + +Y M +L D ++ T ++ I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA---KQSLEGQSHLT---- 453
+A+ + +LH + HRD+K +NI + KV DFGL Q E Q+ LT
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 454 ----TRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELM 490
T GT Y++PE + K D++S G+++ EL+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 23/202 (11%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVK----QITDLDTKGDEEFINEVEIISKIRHRNLLSLRG 351
IG+G+ VYKG L+ T V V Q L + F E E + ++H N++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 352 CCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTRK---QLAWPQRKKIILDVAKGLAY 407
S+ KGK+ LV + SG+L ++ K +W ++ + KGL +
Sbjct: 93 SWEST--VKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQF 144
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
LH P I HRD+K NI + K+ D GLA ++ V GT + APE
Sbjct: 145 LH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFXAPE 200
Query: 467 YALYGQLTEKSDVYSFGIVILE 488
+ E DVY+FG LE
Sbjct: 201 -XYEEKYDESVDVYAFGXCXLE 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 15 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 68
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 124
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 488 ELMS 491
E+ S
Sbjct: 242 EIFS 245
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
E+EI+ K+ H ++ ++ + D ++V + M G L D + + K+L
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKV---VGNKRLKEA 120
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQ 449
K + + YLH + I HRD+K N+LL S+ + K+ DFG +K + G+
Sbjct: 121 TCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGE 175
Query: 450 SHLTTRVAGTYGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 492
+ L + GT YLAPE + D +S G+++ +SG
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 110
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 162
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 163 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGA--- 215
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE L + D ++ G++I ++ +G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 6 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLR 115
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 488 ELMS 491
E+ S
Sbjct: 233 EIFS 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+++D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAPE + + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 52 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 105
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 106 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 161
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 162 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 218
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 278
Query: 488 ELMS 491
E+ S
Sbjct: 279 EIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 6 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLR 115
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 488 ELMS 491
E+ S
Sbjct: 233 EIFS 236
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 286 ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHR 344
TG F + L+ +G Y L+ +V +KQI E +NE I+ +
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--------EHTLNEKRILQAVNFP 101
Query: 345 NLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKG 404
L+ L + + ++V +++ G + H+ + + P + +
Sbjct: 102 FLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLT 153
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
YLH + +RD+K N+L+D + +V DFG AK+ ++G+ T + GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR---TWXLCGTPEYLA 206
Query: 465 PEYALYGQLTEKSDVYSFGIVILELMSG 492
PE L + D ++ G++I E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 44/252 (17%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYKGTLE-DGTLVAVKQITDL--DTK 326
+P + W Q + ++LIG G+ G V + + + +VA+K+I + D
Sbjct: 42 MPRPHSDW-------QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI 94
Query: 327 GDEEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTR 386
+ + E+ I++++ H +++ + + D EK ++V + S D T
Sbjct: 95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS----DFKKLFRTP 150
Query: 387 KQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ-- 444
L K ++ ++ G+ Y+H I HRD+K N L++ + KV DFGLA+
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
Query: 445 ---------------------SLEGQSHLTTRVAG---TYGYLAPEYALYGQ-LTEKSDV 479
+ +L ++ G T Y APE L + TE DV
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267
Query: 480 YSFGIVILELMS 491
+S G + EL++
Sbjct: 268 WSIGCIFAELLN 279
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 78 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 119
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 106 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 147
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 208 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 288 GGFSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDL-----DTKGDEEFINEVEIIS 339
G + +G+G+ G V Y T G VA+K I D +G E E+ +
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIE--REISYLR 68
Query: 340 KIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
+RH +++ L S D+ +V ++ L D+I + R +++ + ++
Sbjct: 69 LLRHPHIIKLYDVIKSKDE-----IIMVIEY-AGNELFDYI---VQRDKMSEQEARRFFQ 119
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ + Y H + I HRD+K N+LLD + K+ADFGL+ +G T+ G+
Sbjct: 120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 174
Query: 460 YGYLAPEYALYGQLT--EKSDVYSFGIVILELMSGR 493
Y APE + G+L + DV+S G+++ ++ R
Sbjct: 175 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 288 GGFSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDL-----DTKGDEEFINEVEIIS 339
G + +G+G+ G V Y T G VA+K I D +G E E+ +
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIE--REISYLR 69
Query: 340 KIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
+RH +++ L S D+ +V ++ L D+I + R +++ + ++
Sbjct: 70 LLRHPHIIKLYDVIKSKDE-----IIMVIEY-AGNELFDYI---VQRDKMSEQEARRFFQ 120
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ + Y H + I HRD+K N+LLD + K+ADFGL+ +G T+ G+
Sbjct: 121 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 175
Query: 460 YGYLAPEYALYGQLT--EKSDVYSFGIVILELMSGR 493
Y APE + G+L + DV+S G+++ ++ R
Sbjct: 176 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 288 GGFSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDL-----DTKGDEEFINEVEIIS 339
G + +G+G+ G V Y T G VA+K I D +G E E+ +
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIE--REISYLR 59
Query: 340 KIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
+RH +++ L S D+ +V ++ L D+I + R +++ + ++
Sbjct: 60 LLRHPHIIKLYDVIKSKDE-----IIMVIEYA-GNELFDYI---VQRDKMSEQEARRFFQ 110
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ + Y H + I HRD+K N+LLD + K+ADFGL+ +G T+ G+
Sbjct: 111 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 165
Query: 460 YGYLAPEYALYGQLT--EKSDVYSFGIVILELMSGR 493
Y APE + G+L + DV+S G+++ ++ R
Sbjct: 166 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 75 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 116
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 80 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 121
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 181
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 182 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 83 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 124
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL----EDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G VA+K + + E+F+ E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 78 GVITENP---------VWIIMELCTLGELRS---------FLQVRKFSLDLASLILYAYQ 119
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + ++ ++
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 15 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 68
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 124
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 488 ELMS 491
E+ S
Sbjct: 242 EIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 15 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 68
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 124
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 488 ELMS 491
E+ S
Sbjct: 242 EIFS 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 288 GGFSQKNLIGQGASGVV---YKGTLEDGTLVAVKQITDL-----DTKGDEEFINEVEIIS 339
G + +G+G+ G V Y T G VA+K I D +G E E+ +
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIE--REISYLR 63
Query: 340 KIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL 399
+RH +++ L S D+ +V ++ L D+I + R +++ + ++
Sbjct: 64 LLRHPHIIKLYDVIKSKDE-----IIMVIEYA-GNELFDYI---VQRDKMSEQEARRFFQ 114
Query: 400 DVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGT 459
+ + Y H + I HRD+K N+LLD + K+ADFGL+ +G T+ G+
Sbjct: 115 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 169
Query: 460 YGYLAPEYALYGQLT--EKSDVYSFGIVILELMSGR 493
Y APE + G+L + DV+S G+++ ++ R
Sbjct: 170 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL----EDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G VA+K + + E+F+ E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 78 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 119
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT YLAP L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL---EDGTL-VAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G E+ L VA+K + + E+F+ E + + H +++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 81 GVITENP---------VWIIMELCTLGELRS---------FLQVRKYSLDLASLILYAYQ 122
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 182
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 183 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 27/170 (15%)
Query: 329 EEFINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSL--GDHISNALTR 386
++F NE++II+ I++ L+ G + D+ +++Y++M + S+ D L +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDE-----VYIIYEYMENDSILKFDEYFFVLDK 142
Query: 387 KQLAW-PQR--KKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK 443
+ P + K II V +Y+H + I HRD+K +NIL+D + K++DFG
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG--- 197
Query: 444 QSLEGQSHLTTRVA---GTYGYLAPEY----ALYGQLTEKSDVYSFGIVI 486
E + + ++ GTY ++ PE+ + Y K D++S GI +
Sbjct: 198 ---ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYN--GAKVDIWSLGICL 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 44/244 (18%)
Query: 283 LDQATGGFSQKNLI-----GQGASGVVYKGTL------EDGTLVAVKQITDLDTKGD-EE 330
L+ F +KNL+ G+G G V K T T VAVK + + + + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA------- 383
++E ++ ++ H +++ L G C S D L+ ++ GSL + +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-SQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 384 ------LTRKQLAWPQRKKIIL--------DVAKGLAYLHYGLKPAIYHRDIKSTNILLD 429
L P + + + +++G+ YL + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 430 SEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
K K++DFGL++ E S++ R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 488 ELMS 491
E+++
Sbjct: 244 EIVT 247
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
G F + L+ AS VY L L + I D+ F E +I++ ++
Sbjct: 86 GAFGEVQLVRHKASQKVYAMKL----LSKFEMIKRSDSAF---FWEERDIMAFANSPWVV 138
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
L C DD K ++V ++MP G L + +SN ++ A K +V L
Sbjct: 139 QL--FCAFQDD---KYLYMVMEYMPGGDLVNLMSNYDVPEKWA----KFYTAEVVLALDA 189
Query: 408 LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA-KQSLEGQSHLTTRVAGTYGYLAPE 466
+H + HRD+K N+LLD K+ADFG K G H T V GT Y++PE
Sbjct: 190 IH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPE 245
Query: 467 Y-------ALYGQLTEKSDVYSFGIVILELMSG 492
YG+ + D +S G+ + E++ G
Sbjct: 246 VLKSQGGDGYYGR---ECDWWSVGVFLFEMLVG 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 6 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLR 115
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 488 ELMS 491
E+ S
Sbjct: 233 EIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 270 LPNSGAKW-FRESELDQAT----GGFSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLD 324
LP +KW F L+ G F Q +I A G+ T VAVK + +
Sbjct: 16 LPYDASKWEFPRDRLNLGKPLGRGAFGQ--VIEADAFGIDKTATCRT---VAVKMLKEGA 70
Query: 325 TKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISN 382
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++ +
Sbjct: 71 THSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLRS 126
Query: 383 A------------LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
L + L VAKG+ +L HRD+ + NILL
Sbjct: 127 KRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++ E+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 490 MS 491
S
Sbjct: 244 FS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 17 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 70
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 71 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 126
Query: 382 NA-------------LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
+ L + L VAKG+ +L HRD+ + NILL
Sbjct: 127 SKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 183
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++
Sbjct: 184 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 243
Query: 488 ELMS 491
E+ S
Sbjct: 244 EIFS 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 33/242 (13%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 17 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG 70
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C G ++ +F G+L ++
Sbjct: 71 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLR 126
Query: 382 NA-----------LTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDS 430
+ L + L VAKG+ +L HRD+ + NILL
Sbjct: 127 SKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSE 183
Query: 431 EMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVILEL 489
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++ E+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 490 MS 491
S
Sbjct: 244 FS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 44/244 (18%)
Query: 283 LDQATGGFSQKNLI-----GQGASGVVYKGTL------EDGTLVAVKQITDLDTKGD-EE 330
L+ F +KNL+ G+G G V K T T VAVK + + + + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA------- 383
++E ++ ++ H +++ L G C S D L+ ++ GSL + +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-SQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 384 ------LTRKQLAWPQRKKIIL--------DVAKGLAYLHYGLKPAIYHRDIKSTNILLD 429
L P + + + +++G+ YL + ++ HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 430 SEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
K K++DFGL++ E S + R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 488 ELMS 491
E+++
Sbjct: 244 EIVT 247
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQIT-DLDTKG-DEEFINEVEIISKIRHRNLLSLRGC 352
IG+G G V+K E +VA+K++ D D +G + E+ ++ +++H+N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S K+ LV++F L + + L K + + KGL + H
Sbjct: 70 LHSD-----KKLTLVFEFC-DQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
+ HRD+K N+L++ + K+ADFGLA+ + V T Y P+ +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 473 LTEKS-DVYSFGIVILELMSGRKVLETSN 500
L S D++S G + EL + + L N
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGN 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 270 LPNSGAKWFRESELDQATGGFSQKNLIGQGASGVVYK----GTLEDGTL--VAVKQITDL 323
LP +KW E D+ G +G+GA G V + G + T VAVK + +
Sbjct: 6 LPYDASKW--EFPRDRLKLG----KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG 59
Query: 324 DTKGDEE-FINEVEIISKI-RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHIS 381
T + ++E++I+ I H N+++L G C + G ++ +F G+L ++
Sbjct: 60 ATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLR 115
Query: 382 ---NALTRKQLAWPQRKKIIL----------DVAKGLAYLHYGLKPAIYHRDIKSTNILL 428
N ++A K L VAKG+ +L HRD+ + NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 429 DSEMKAKVADFGLAKQSLEGQSHLTTRVAG-TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 488 ELMS 491
E+ S
Sbjct: 233 EIFS 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLRGCCV 354
+G+G G VYK +DG + ++ G E+ ++ +++H N++SL+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 355 SSDDEKGKRRFLVYDFMPSG---SLGDHISNALTRKQLAWPQR--KKIILDVAKGLAYLH 409
S D K +L++D+ + H ++ +K + P+ K ++ + G+ YLH
Sbjct: 89 SHADRKV---WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 410 YGLKPAIYHRDIKSTNILLDSE----MKAKVADFGLAK---QSLEGQSHLTTRVAGTYGY 462
+ HRD+K NIL+ E + K+AD G A+ L+ + L V T+ Y
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP-VVVTFWY 201
Query: 463 LAPEYALYG-QLTEKSDVYSFGIVILELMSGRKVLE 497
APE L T+ D+++ G + EL++ +
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 396 KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR 455
KI + + K L +LH L ++ HRD+K +N+L+++ + K+ DFG++ ++ S T
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTI 212
Query: 456 VAGTYGYLAPEYALYGQLTE-----KSDVYSFGIVILEL 489
AG Y+APE + +L + KSD++S GI ++EL
Sbjct: 213 DAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL----EDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G VA+K + + E+F+ E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 78 GVITENP---------VWIIMELCTLGELRS---------FLQVRKFSLDLASLILYAYQ 119
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ + K+ DFGL++ + + ++ ++
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
Query: 397 IILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA---KQSLEGQSHLT 453
I + +A+ + +LH + HRD+K +NI + KV DFGL Q E Q+ LT
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 454 TRVA--------GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLETSNSSFLL 505
A GT Y++PE + K D++S G+++ EL+ T +
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRI 282
Query: 506 ITD 508
ITD
Sbjct: 283 ITD 285
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 290 FSQKNLIGQGASG-VVYKGTLEDGTLVAVKQI-TDLDTKGDEEFINEVEIISKI-RHRNL 346
F K+++G GA G +VY+G D VAVK+I + + D EV+++ + H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFAD----REVQLLRESDEHPNV 80
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL--DVAKG 404
+R C D + + ++ + + +K A + I L G
Sbjct: 81 --IRYFCTEKDRQ--------FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSG 130
Query: 405 LAYLHYGLKPAIYHRDIKSTNILL-----DSEMKAKVADFGLAKQSLEGQSHLTTR--VA 457
LA+LH I HRD+K NIL+ ++KA ++DFGL K+ G+ + R V
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 458 GTYGYLAPEYA---LYGQLTEKSDVYSFGIVILELMS 491
GT G++APE T D++S G V ++S
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL----EDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G VA+K + + E+F+ E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 458 GVITENP---------VWIIMELCTLGELRS---------FLQVRKFSLDLASLILYAYQ 499
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ S K+ DFGL++ + + ++ ++
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 292 QKNLIGQGASGVVYKG-TLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSL 349
Q++++G+GA V L AVK I EVE++ + + HRN+L L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 350 RGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLH 409
D R +LV++ M GS+ HI R+ + ++ DVA L +LH
Sbjct: 77 IEFFEEED-----RFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLH 128
Query: 410 YGLKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQ-SLEGQ-SHLTT----RVAGTY 460
I HRD+K NIL + + K+ DF L L G S ++T G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 461 GYLAPE----YALYGQLTEK-SDVYSFGIVILELMSG 492
Y+APE ++ + +K D++S G+++ L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 281 SELDQ-------ATGGFSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFI 332
++LDQ TG F + L+ SG Y L+ +V +KQI E +
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--------EHTL 89
Query: 333 NEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP 392
NE I+ + L+ L + + ++V +++ G + H+ + + P
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSN-----LYMVMEYVAGGEMFSHLRRI---GRFSEP 141
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
+ + YLH + +RD+K N+L+D + +V DFG AK+ ++G+
Sbjct: 142 HARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR--- 194
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
T + GT LAPE L + D ++ G++I E+ +G
Sbjct: 195 TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 44/244 (18%)
Query: 283 LDQATGGFSQKNLI-----GQGASGVVYKGTL------EDGTLVAVKQITDLDTKGD-EE 330
L+ F +KNL+ G+G G V K T T VAVK + + + + +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 331 FINEVEIISKIRHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNA------- 383
++E ++ ++ H +++ L G C S D L+ ++ GSL + +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-SQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 384 ------LTRKQLAWPQRKKIIL--------DVAKGLAYLHYGLKPAIYHRDIKSTNILLD 429
L P + + + +++G+ YL + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 430 SEMKAKVADFGLAKQSLEGQSHLTTRVAG--TYGYLAPEYALYGQLTEKSDVYSFGIVIL 487
K K++DFGL++ E S + R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 488 ELMS 491
E+++
Sbjct: 244 EIVT 247
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ +++ L +LH + I +RD+K NI+L+ + K+ DFGL K+S+ + +T
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFC 182
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GT Y+APE + D +S G ++ ++++G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA 457
+ +++ L +LH + I +RD+K NI+L+ + K+ DFGL K+S+ + +T
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFC 182
Query: 458 GTYGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
GT Y+APE + D +S G ++ ++++G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTRKQLAWP 392
E+ ++ ++H N++ L + + F LV FM + L + + +++ +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQY- 148
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS-LEGQSH 451
++ + KGL Y+H + HRD+K N+ ++ + + K+ DFGLA+ + E +
Sbjct: 149 ----LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY 201
Query: 452 LTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLE 497
+ TR Y APE L + + D++S G ++ E+++G+ + +
Sbjct: 202 VVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 120/307 (39%), Gaps = 54/307 (17%)
Query: 294 NLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCC 353
LIG+G G VY G + + I + + F EV + RH N++ G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLK 413
+S ++ +L + +A + L + ++I ++ KG+ YLH
Sbjct: 99 MSPPHLA-----IITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLH---A 148
Query: 414 PAIYHRDIKSTNILLDSEMKAKVADFGLAKQS---LEGQSHLTTRVA-GTYGYLAPEYAL 469
I H+D+KS N+ D+ K + DFGL S G+ R+ G +LAPE +
Sbjct: 149 KGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE--I 205
Query: 470 YGQL-----------TEKSDVYSFGIVILELMSGRKVLETSNSSFLLITDWAWM---LAN 515
QL ++ SDV++ G + EL + +T + ++ M L+
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ 265
Query: 516 SGKVDEIFDEFIREEGSRAVMERFVRVGILCAHVMVALRPTIADALKMLEGDIDIPTLPE 575
G EI D + + C RPT + MLE LP+
Sbjct: 266 IGMGKEISD-----------------ILLFCWAFEQEERPTFTKLMDMLE------KLPK 302
Query: 576 RPLPLTH 582
R L+H
Sbjct: 303 RNRRLSH 309
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 57/249 (22%)
Query: 285 QATGGFSQKNLIGQGASGVVYKGTLEDGTL-VAVKQITDL--DTKGDEEFINEVEIISKI 341
+ + K+LIG+G+ G VY ++ VA+K++ + D + + E+ I++++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP------QRK 395
+ ++ L + D K ++V + I+++ +K P K
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE----------IADSDLKKLFKTPIFLTEQHVK 134
Query: 396 KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK------------ 443
I+ ++ G ++H + I HRD+K N LL+ + K+ DFGLA+
Sbjct: 135 TILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
Query: 444 ---------------QSLEGQ--SHLTTRVAGTYGYLAPEYALYGQ-LTEKSDVYSFGIV 485
++L+ Q SH+ TR Y APE L + T D++S G +
Sbjct: 192 DLEEKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCI 246
Query: 486 ILELMSGRK 494
EL++ K
Sbjct: 247 FAELLNMMK 255
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 296 IGQGASGVVYKGTL----EDGTLVAVKQITDLDTKG-DEEFINEVEIISKIRHRNLLSLR 350
IG+G G V++G VA+K + + E+F+ E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 351 GCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY--- 407
G + V+ M +LG+ S + Q +K LD+A + Y
Sbjct: 458 GVITENP---------VWIIMELCTLGELRS---------FLQVRKFSLDLASLILYAYQ 499
Query: 408 ----LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYL 463
L Y HRDI + N+L+ + K+ DFGL++ + + ++ ++
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 464 APEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLE 497
APE + + T SDV+ FG+ + E LM G K +
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG G GV + LVAVK I + K DE E+ +RH N++ + +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +V ++ G L + I NA + + + + + G++Y H
Sbjct: 85 TP-----THLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCH---AM 133
Query: 415 AIYHRDIKSTNILLDSE--MKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRD+K N LLD + K+ DFG +K S L Q T GT Y+APE L
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKK 190
Query: 472 QLTEK-SDVYSFGIVILELMSG 492
+ K +DV+S G+ + ++ G
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVG 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 296 IGQGASGVVYKG-TLEDGTLVAVKQIT-DLDTKG-DEEFINEVEIISKIRHRNLLSLRGC 352
IG+G G V+K E +VA+K++ D D +G + E+ ++ +++H+N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGL 412
S K+ LV++F L + + L K + + KGL + H
Sbjct: 70 LHSD-----KKLTLVFEFC-DQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 413 KPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
+ HRD+K N+L++ + K+A+FGLA+ + V T Y P+ +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 473 LTEKS-DVYSFGIVILELMSGRKVLETSN 500
L S D++S G + EL + + L N
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG G GV + LVAVK I + K DE E+ +RH N++ + +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +V ++ G L + I NA + + + + + G++Y H
Sbjct: 86 TP-----THLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVSYAHAM--- 134
Query: 415 AIYHRDIKSTNILLDSE--MKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRD+K N LLD + K+ADFG +K S L Q GT Y+APE L
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVLLKK 191
Query: 472 QLTEK-SDVYSFGIVILELMSG 492
+ K +DV+S G+ + ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 334 EVEIISKIRHRNLLSLRGCCVSSDDEKGKRRF-LVYDFMPSGSLGDHISNALTRKQLAWP 392
E+ ++ ++H N++ L + + F LV FM + L + + +++ +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQY- 130
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQS-LEGQSH 451
++ + KGL Y+H + HRD+K N+ ++ + + K+ DFGLA+ + E +
Sbjct: 131 ----LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY 183
Query: 452 LTTRVAGTYGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLE 497
+ TR Y APE L + + D++S G ++ E+++G+ + +
Sbjct: 184 VVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 60/238 (25%)
Query: 293 KNLIGQGASGVVY----KGTLEDGTLVAVKQITDL--DTKGDEEFINEVEIISKIRHRNL 346
K+LIG+G+ G VY K T ++ VA+K++ + D + + E+ I+++++ +
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKN---VAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 347 LSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWP------QRKKIILD 400
+ L + D K ++V + I+++ +K P K I+ +
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLE----------IADSDLKKLFKTPIFLTEEHIKTILYN 137
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAK----------------- 443
+ G ++H + I HRD+K N LL+ + KV DFGLA+
Sbjct: 138 LLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 444 -------QSLEGQ--SHLTTRVAGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMS 491
++L+ Q SH+ TR Y APE L + KS D++S G + EL++
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 290 FSQKNLIGQGASGVVYKGTLED-GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + + GQG G V G + G VA+K++ D + + ++ ++ + H N++
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-DPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 349 LRGCCVSSDDEKGKRRFL--VYDFMPSGSLGDHISNALTRKQLAWPQR--KKIILDVAKG 404
L+ + + + +L V +++P +L N R+Q+A P K + + +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRN-YYRRQVAPPPILIKVFLFQLIRS 141
Query: 405 LAYLHYGLKPAIY--HRDIKSTNILL-DSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYG 461
+ LH P++ HRDIK N+L+ +++ K+ DFG AK+ + ++ + Y
Sbjct: 142 IGCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY-ICSRY- 196
Query: 462 YLAPEYALYGQ-LTEKSDVYSFGIVILELMSGRKVLETSNSS 502
Y APE Q T D++S G + E+M G + NS+
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 296 IGQGASGVVY----KGTLEDGTLVAVKQI---TDLDTKGDEEFINEVEIISKIRHRNLLS 348
IG G GV K T E LVAVK I +D E IN +RH N++
Sbjct: 28 IGSGNFGVARLMRDKLTKE---LVAVKYIERGAAIDENVQREIINH----RSLRHPNIVR 80
Query: 349 LRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYL 408
+ ++ ++ ++ G L + I NA + + + + + G++Y
Sbjct: 81 FKEVILTP-----THLAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYC 132
Query: 409 HYGLKPAIYHRDIKSTNILLDSE--MKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPE 466
H I HRD+K N LLD + K+ DFG +K S+ +T GT Y+APE
Sbjct: 133 H---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPE 187
Query: 467 YALYGQLTEK-SDVYSFGIVILELMSG 492
L + K +DV+S G+ + ++ G
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 396 KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR 455
KI + + K L +LH L ++ HRD+K +N+L+++ + K+ DFG++ ++ +
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID- 169
Query: 456 VAGTYGYLAPEYALYGQLTE-----KSDVYSFGIVILEL 489
AG Y+APE + +L + KSD++S GI ++EL
Sbjct: 170 -AGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 293 KNLIGQGASGVVYKGT-LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLR 350
+ ++ +G VY+ + G A+K++ + + + I EV + K+ H N++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF- 91
Query: 351 GCCVSS----DDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLA 406
C +S + + G+ FL+ + G L + + +R L+ KI + +
Sbjct: 92 -CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLA 442
++H KP I HRD+K N+LL ++ K+ DFG A
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 288 GGFSQKNLIGQGASGVVYKGTLEDGTLV------AVKQITDLDTKGDEEFINEVEIISKI 341
G + +L+G+G+ G V K L+ TL K+ G+ E++++ ++
Sbjct: 5 GKYLMGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 342 RHRNLLSLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDV 401
RH+N++ L +E+ ++ ++V ++ G + +++ K+ Q +
Sbjct: 64 RHKNVIQLVDVLY---NEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 402 AKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVA-GTY 460
GL YLH I H+DIK N+LL + K++ G+A+ + T R + G+
Sbjct: 119 IDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 461 GYLAPEYA--LYGQLTEKSDVYSFGIVILELMSGRKVLETSN 500
+ PE A L K D++S G+ + + +G E N
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQIT-DLDTKGDEEFINEVEIISKI-RHRNLL 347
+G GA G V + T + VAVK + E ++E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK------------ 395
+L G C G ++ ++ G L N L RK+ ++ K
Sbjct: 114 NLLGACTI-----GGPTLVITEYCCYGDL----LNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 396 -------KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ---- 444
VAKG+A+L K I HRD+ + NILL K+ DFGLA+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 445 ---SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++G + L + ++APE T +SDV+S+GI + EL S
Sbjct: 222 SNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 396 KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM---KAKVADFGLAKQSLEGQSHL 452
++I + +G+ YLH + I H D+K NILL S K+ DFG++++ G +
Sbjct: 135 RLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACE 189
Query: 453 TTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ GT YLAPE Y +T +D+++ GI+ L++
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQIT-DLDTKGDEEFINEVEIISKI-RHRNLL 347
+G GA G V + T + VAVK + E ++E++++S + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK------------ 395
+L G C G ++ ++ G L N L RK+ ++ K
Sbjct: 91 NLLGACTI-----GGPTLVITEYCCYGDL----LNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 396 -------KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ---- 444
VAKG+A+L K I HRD+ + NILL K+ DFGLA+
Sbjct: 142 LDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 445 ---SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++G + L + ++APE T +SDV+S+GI + EL S
Sbjct: 199 SNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQIT-DLDTKGDEEFINEVEIISKI-RHRNLL 347
+G GA G V + T + VAVK + E ++E++++S + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK------------ 395
+L G C G ++ ++ G L N L RK+ ++ K
Sbjct: 107 NLLGACTI-----GGPTLVITEYCCYGDL----LNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 396 -------KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ---- 444
VAKG+A+L K I HRD+ + NILL K+ DFGLA+
Sbjct: 158 LDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 445 ---SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++G + L + ++APE T +SDV+S+GI + EL S
Sbjct: 215 SNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQIT-DLDTKGDEEFINEVEIISKI-RHRNLL 347
+G GA G V + T + VAVK + E ++E++++S + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK------------ 395
+L G C G ++ ++ G L N L RK+ ++ K
Sbjct: 109 NLLGACTI-----GGPTLVITEYCCYGDL----LNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 396 -------KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ---- 444
VAKG+A+L K I HRD+ + NILL K+ DFGLA+
Sbjct: 160 LDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 445 ---SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++G + L + ++APE T +SDV+S+GI + EL S
Sbjct: 217 SNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 365 FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL--DVAKGLAYLHYGLKPAIYHRDIK 422
++V ++MP G L + +SN ++ A +++L D + ++H RD+K
Sbjct: 145 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVK 195
Query: 423 STNILLDSEMKAKVADFGL-AKQSLEGQSHLTTRVAGTYGYLAPEY-------ALYGQLT 474
N+LLD K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR-- 252
Query: 475 EKSDVYSFGIVILELMSG 492
+ D +S G+ + E++ G
Sbjct: 253 -ECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 365 FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL--DVAKGLAYLHYGLKPAIYHRDIK 422
++V ++MP G L + +SN ++ A +++L D + ++H RD+K
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVK 200
Query: 423 STNILLDSEMKAKVADFGL-AKQSLEGQSHLTTRVAGTYGYLAPEY-------ALYGQLT 474
N+LLD K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR-- 257
Query: 475 EKSDVYSFGIVILELMSG 492
+ D +S G+ + E++ G
Sbjct: 258 -ECDWWSVGVFLYEMLVG 274
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 52/230 (22%)
Query: 296 IGQGASGVVYKGTL------EDGTLVAVKQIT-DLDTKGDEEFINEVEIISKI-RHRNLL 347
+G GA G V + T + VAVK + E ++E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK------------ 395
+L G C G ++ ++ G L N L RK+ ++ K
Sbjct: 114 NLLGACTI-----GGPTLVITEYCCYGDL----LNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 396 -------KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQ---- 444
VAKG+A+L K I HRD+ + NILL K+ DFGLA+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 445 ---SLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++G + L + ++APE T +SDV+S+GI + EL S
Sbjct: 222 SNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 365 FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIIL--DVAKGLAYLHYGLKPAIYHRDIK 422
++V ++MP G L + +SN ++ A +++L D + ++H RD+K
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVK 200
Query: 423 STNILLDSEMKAKVADFGL-AKQSLEGQSHLTTRVAGTYGYLAPEY-------ALYGQLT 474
N+LLD K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR-- 257
Query: 475 EKSDVYSFGIVILELMSG 492
+ D +S G+ + E++ G
Sbjct: 258 -ECDWWSVGVFLYEMLVG 274
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 365 FLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKST 424
FLV + + G L + I +K + + I+ + ++++H + HRD+K
Sbjct: 82 FLVMELLNGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPE 135
Query: 425 NILLDSE---MKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYS 481
N+L E ++ K+ DFG A+ L T T Y APE E D++S
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWS 194
Query: 482 FGIVILELMSGRKVLETSNSSF 503
G+++ ++SG+ ++ + S
Sbjct: 195 LGVILYTMLSGQVPFQSHDRSL 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 290 FSQKNLIGQGASGVVYK-GTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLS 348
F + + +G G+ G V+K + EDG L AVK+ +G + + ++++ +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS-PFRGPK---DRARKLAEVGSHEKVG 114
Query: 349 LRGCCVSSDD--EKGKRRFLVYDFMPSGSLGDHIS--NALTRKQLAWPQRKKIILDVAKG 404
CCV + E+G +L + SL H A + W + D
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVW----GYLRDTLLA 169
Query: 405 LAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLA 464
LA+LH + H D+K NI L + K+ DFGL + G + G Y+A
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL--GTAGAGEVQEGDPRYMA 224
Query: 465 PEYALYGQLTEKSDVYSFGIVILEL 489
PE L G +DV+S G+ ILE+
Sbjct: 225 PEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 296 IGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFI-NEVEIISKIRHRNLLSLRGCCV 354
+G GA GVV++ + V V + + D+ + NE+ I++++ H L++L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF- 117
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
E L+ +F+ G L D I A +++ + + +GL ++H +
Sbjct: 118 ----EDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMH---EH 168
Query: 415 AIYHRDIKSTNILLDSEMKA--KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQ 472
+I H DIK NI+ +++ + K+ DFGLA + + T + APE
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKL--NPDEIVKVTTATAEFAAPEIVDREP 226
Query: 473 LTEKSDVYSFGIVILELMSG 492
+ +D+++ G++ L+SG
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYG 411
V + GKR L+ M G+ S R A+ +R+ +I+ D+ + +LH
Sbjct: 90 VYENMHHGKRCLLI--IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-- 145
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
I HRD+K N+L S+ K K+ DFG AK++ Q+ L T Y Y+APE
Sbjct: 146 -SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVL 201
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
+ + D++S G+++ L+ G
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 354 VSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYG 411
V + GKR L+ M G+ S R A+ +R+ +I+ D+ + +LH
Sbjct: 71 VYENMHHGKRCLLI--IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-- 126
Query: 412 LKPAIYHRDIKSTNILLDSEMK---AKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYA 468
I HRD+K N+L S+ K K+ DFG AK++ Q+ L T Y Y+APE
Sbjct: 127 -SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVL 182
Query: 469 LYGQLTEKSDVYSFGIVILELMSG 492
+ + D++S G+++ L+ G
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFIN-EVEIISK--IRHRNLLSLRG 351
IG G GV + LVAVK I +G++ N + EII+ +RH N++ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
++ +V ++ G L + I NA + + + + + G++Y H
Sbjct: 83 VILTP-----THLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCH-- 132
Query: 412 LKPAIYHRDIKSTNILLDSE--MKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPEYA 468
+ HRD+K N LLD + K+ DFG +K S L Q T GT Y+APE
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVL 188
Query: 469 LYGQLTEK-SDVYSFGIVILELMSG 492
L + K +DV+S G+ + ++ G
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG G GV + LVAVK I + K DE E+ +RH N++ + +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +V ++ G L + I NA + + + + + G++Y H
Sbjct: 86 TP-----THLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 415 AIYHRDIKSTNILLDSE--MKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRD+K N LLD + K+ FG +K S L Q T GT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKK 191
Query: 472 QLTEK-SDVYSFGIVILELMSG 492
+ K +DV+S G+ + ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 296 IGQGASGVVYKGTLED--------GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
+GQG ++KG + T V +K + E F ++SK+ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAY 407
G C D+ LV +F+ GSL ++ + W L+VAK LA+
Sbjct: 76 LNYGVCFCGDE-----NILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQLAW 124
Query: 408 -LHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG-------QSHLTTRVAGT 459
+H+ + + H ++ + NILL E K + K S G + L R+
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP-- 182
Query: 460 YGYLAPEYALYGQ-LTEKSDVYSFGIVILELMSG 492
++ PE + L +D +SFG + E+ SG
Sbjct: 183 --WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 296 IGQGASGVV-YKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGCCV 354
IG G GV + LVAVK I + K DE E+ +RH N++ + +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 355 SSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKP 414
+ +V ++ G L + I NA + + + + + G++Y H
Sbjct: 86 TP-----THLAIVMEYASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 415 AIYHRDIKSTNILLDSE--MKAKVADFGLAKQS-LEGQSHLTTRVAGTYGYLAPEYALYG 471
+ HRD+K N LLD + K+ FG +K S L Q T GT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV---GTPAYIAPEVLLKK 191
Query: 472 QLTEK-SDVYSFGIVILELMSG 492
+ K +DV+S G+ + ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 296 IGQGASGVVYKGTLED--------GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLL 347
+GQG ++KG + T V +K + E F ++SK+ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGL-A 406
G CV D+ LV +F+ GSL ++ + W L+VAK L A
Sbjct: 76 LNYGVCVCGDE-----NILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQLAA 124
Query: 407 YLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEG-------QSHLTTRVAGT 459
+H+ + + H ++ + NILL E K + K S G + L R+
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP-- 182
Query: 460 YGYLAPEYALYGQ-LTEKSDVYSFGIVILELMSG 492
++ PE + L +D +SFG + E+ SG
Sbjct: 183 --WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG 458
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 205 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 459 -TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++APE T +SDV+SFG+++ E+ S
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG 458
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 207 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 459 -TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++APE T +SDV+SFG+++ E+ S
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG 458
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 198 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 459 -TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++APE T +SDV+SFG+++ E+ S
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAG 458
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 200 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 459 -TYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
++APE T +SDV+SFG+++ E+ S
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 396 KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTR 455
KI + + K L +LH L ++ HRD+K +N+L+++ + K DFG++ ++ +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 456 VAGTYGYLAPEYALYGQLTE-----KSDVYSFGIVILEL 489
AG Y APE + +L + KSD++S GI +EL
Sbjct: 197 -AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 45/225 (20%)
Query: 290 FSQKNLIGQGASGVVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSL 349
F +IG+GA G V AV ++ + D + +N+ E++ +
Sbjct: 76 FEILKVIGRGAFGEV-----------AVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 350 RGCCVSSDD----------EKGKRRFLVYDFMPSGSL-------GDHISNALTRKQLAWP 392
R V+ D + +LV D+ G L D + + R LA
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-- 182
Query: 393 QRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHL 452
I +D L Y+H RDIK NIL+D ++ADFG + +E +
Sbjct: 183 -EMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232
Query: 453 TTRVAGTYGYLAPEY-----ALYGQLTEKSDVYSFGIVILELMSG 492
++ GT Y++PE G+ + D +S G+ + E++ G
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 25/212 (11%)
Query: 294 NLIGQGASGVVYKG-TLEDGTLVAVK-----QITDLDTKGDEEFINEVEIISKIRHRNLL 347
+IG+GA VV + E G AVK + T E+ E I ++H +++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 348 SLRGCCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI----ILDVAK 403
L SSD ++V++FM L I + R + + + + + +
Sbjct: 90 ELLET-YSSDG----MLYMVFEFMDGADLCFEI---VKRADAGFVYSEAVASHYMRQILE 141
Query: 404 GLAYLHYGLKPAIYHRDIKSTNILLDSEMKA---KVADFGLAKQSLEGQSHLTTRVAGTY 460
L Y H I HRD+K N+LL S+ + K+ DFG+A Q E RV GT
Sbjct: 142 ALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTP 197
Query: 461 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 492
++APE + DV+ G+++ L+SG
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 54/237 (22%)
Query: 293 KNLIGQGASG-VVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLR 350
+ ++G G+SG VV++G+ + G VAVK++ L D + E++++++ H N++ R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRM--LIDFCDIALM-EIKLLTESDDHPNVI--R 73
Query: 351 GCCVSSDDEKGKRRFL----------VYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
C + D RFL + D + S ++ D N +K+ ++
Sbjct: 74 YYCSETTD-----RFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEY---NPISLLRQ 123
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDS-------------EMKAKVADFGLAKQSLE 447
+A G+A+LH LK I HRD+K NIL+ + ++ ++DFGL K+
Sbjct: 124 IASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 448 GQSHLTTRV---AGTYGYLAPE-------YALYGQLTEKSDVYSFGIVILELMSGRK 494
GQS T + +GT G+ APE +LT D++S G V ++S K
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 399 LDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLT---TR 455
VA+G+ +L HRD+ + NILL K+ DFGLA+ + ++ TR
Sbjct: 206 FQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 456 VAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
+ ++APE + KSDV+S+G+++ E+ S
Sbjct: 263 LP--LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 104 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 160
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 161 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 218
Query: 492 G 492
G
Sbjct: 219 G 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 106 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 162
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 163 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 220
Query: 492 G 492
G
Sbjct: 221 G 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 105 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 161
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 162 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 219
Query: 492 G 492
G
Sbjct: 220 G 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 154
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 155 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 492 G 492
G
Sbjct: 213 G 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 114 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 170
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 171 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 228
Query: 492 G 492
G
Sbjct: 229 G 229
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 99 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 155
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 156 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 213
Query: 492 G 492
G
Sbjct: 214 G 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 156
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 157 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 492 G 492
G
Sbjct: 215 G 215
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 30/207 (14%)
Query: 296 IGQGASGVVYKGTLED---GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+G+ G V++ +ED G AVK++ L+ EE + + S ++ L G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTSP----RIVPLYGA 153
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI--ILDVAKGLAYLHY 410
+G + + + GSLG L ++Q P+ + + + +GL YLH
Sbjct: 154 V-----REGPWVNIFMELLEGGSLGQ-----LVKEQGCLPEDRALYYLGQALEGLEYLH- 202
Query: 411 GLKPAIYHRDIKSTNILLDSE-MKAKVADFGLA---KQSLEGQSHLTTR-VAGTYGYLAP 465
I H D+K+ N+LL S+ A + DFG A + G+S LT + GT ++AP
Sbjct: 203 --SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSG 492
E L K DV+S ++L +++G
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 156
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 157 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 214
Query: 492 G 492
G
Sbjct: 215 G 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 200
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 201 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258
Query: 492 G 492
G
Sbjct: 259 G 259
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 418 HRDIKSTNILLDSEMKAKVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKS 477
HRD+K NIL+ ++ A + DFG+A + + + GT Y APE T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 478 DVYSFGIVILELMSG 492
D+Y+ V+ E ++G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 150 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 206
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D++S G+++ L+
Sbjct: 207 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLC 264
Query: 492 G 492
G
Sbjct: 265 G 265
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 59/276 (21%)
Query: 250 KKRKRNALHEEFVRSFKDSVLPNSGAKWFRESELDQATGGFSQKNLIGQGASG-VVYKGT 308
KKRKR + + R + + +PN F +S + + ++G G+SG VV++G+
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPN-----FEQSLKNLVVS----EKILGYGSSGTVVFQGS 54
Query: 309 LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLRGCCVSSDDEKGKRRFL- 366
+ G VAVK++ L D + E++++++ H N++ R C + D RFL
Sbjct: 55 FQ-GRPVAVKRM--LIDFCDIALM-EIKLLTESDDHPNVI--RYYCSETTD-----RFLY 103
Query: 367 ---------VYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIY 417
+ D + S ++ D N +K+ ++ +A G+A+LH LK I
Sbjct: 104 IALELCNLNLQDLVESKNVSDE--NLKLQKEY---NPISLLRQIASGVAHLH-SLK--II 155
Query: 418 HRDIKSTNILLDS-------------EMKAKVADFGLAKQSLEGQSHLTTRV---AGTYG 461
HRD+K NIL+ + ++ ++DFGL K+ GQ + +GT G
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 462 YLAPEY---ALYGQLTEKSDVYSFGIVILELMSGRK 494
+ APE + +LT D++S G V ++S K
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 59/276 (21%)
Query: 250 KKRKRNALHEEFVRSFKDSVLPNSGAKWFRESELDQATGGFSQKNLIGQGASG-VVYKGT 308
KKRKR + + R + + +PN F +S + + ++G G+SG VV++G+
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPN-----FEQSLKNLVVS----EKILGYGSSGTVVFQGS 54
Query: 309 LEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLRGCCVSSDDEKGKRRFL- 366
+ G VAVK++ L D + E++++++ H N++ R C + D RFL
Sbjct: 55 FQ-GRPVAVKRM--LIDFCDIALM-EIKLLTESDDHPNVI--RYYCSETTD-----RFLY 103
Query: 367 ---------VYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYGLKPAIY 417
+ D + S ++ D N +K+ ++ +A G+A+LH LK I
Sbjct: 104 IALELCNLNLQDLVESKNVSD--ENLKLQKEY---NPISLLRQIASGVAHLH-SLK--II 155
Query: 418 HRDIKSTNILLDS-------------EMKAKVADFGLAKQSLEGQSHLTTRV---AGTYG 461
HRD+K NIL+ + ++ ++DFGL K+ GQ + +GT G
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 462 YLAPEY---ALYGQLTEKSDVYSFGIVILELMSGRK 494
+ APE + +LT D++S G V ++S K
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 296 IGQGASGVVYK--GTLEDGTLVAVKQITDLDTKGDEEFI--NEVEIISKIRHRNLLSLRG 351
+G+G G+V++ T T +A + KG ++ + E+ I++ RHRN+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMA----KFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 352 CCVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKIILDVAKGLAYLHYG 411
S ++ ++++F+ + + I+ + +L + + V + L +LH
Sbjct: 69 SFESMEE-----LVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLH-- 119
Query: 412 LKPAIYHRDIKSTNILLDSEMKA--KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYAL 469
I H DI+ NI+ + + K+ +FG A+Q G + A Y APE
Sbjct: 120 -SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEY--YAPEVHQ 176
Query: 470 YGQLTEKSDVYSFGIVILELMSG 492
+ ++ +D++S G ++ L+SG
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSG 199
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 296 IGQGASGVVYKGTLED---GTLVAVKQITDLDTKGDEEFINEVEIISKIRHRNLLSLRGC 352
+G+G+ G V++ +ED G AVK++ L+ EE + + S ++ L G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTSP----RIVPLYGA 134
Query: 353 CVSSDDEKGKRRFLVYDFMPSGSLGDHISNALTRKQLAWPQRKKI--ILDVAKGLAYLHY 410
+G + + + GSLG L ++Q P+ + + + +GL YLH
Sbjct: 135 V-----REGPWVNIFMELLEGGSLGQ-----LVKEQGCLPEDRALYYLGQALEGLEYLH- 183
Query: 411 GLKPAIYHRDIKSTNILLDSE-MKAKVADFGLA---KQSLEGQSHLTTR-VAGTYGYLAP 465
I H D+K+ N+LL S+ A + DFG A + G+ LT + GT ++AP
Sbjct: 184 --SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 466 EYALYGQLTEKSDVYSFGIVILELMSG 492
E L K DV+S ++L +++G
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I+ + + + YLH I HRD+K N+L S+
Sbjct: 98 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 154
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S T T Y+APE + + D++S G+++ L+
Sbjct: 155 AILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 492 G 492
G
Sbjct: 213 G 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 54/237 (22%)
Query: 293 KNLIGQGASG-VVYKGTLEDGTLVAVKQITDLDTKGDEEFINEVEIISKIR-HRNLLSLR 350
+ ++G G+SG VV++G+ + G VAVK++ L D + E++++++ H N++ R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRM--LIDFCDIALM-EIKLLTESDDHPNVI--R 73
Query: 351 GCCVSSDDEKGKRRFL----------VYDFMPSGSLGDHISNALTRKQLAWPQRKKIILD 400
C + D RFL + D + S ++ D N +K+ ++
Sbjct: 74 YYCSETTD-----RFLYIALELCNLNLQDLVESKNVSD--ENLKLQKEY---NPISLLRQ 123
Query: 401 VAKGLAYLHYGLKPAIYHRDIKSTNILLDS-------------EMKAKVADFGLAKQSLE 447
+A G+A+LH LK I HRD+K NIL+ + ++ ++DFGL K+
Sbjct: 124 IASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 448 GQSHLTTRV---AGTYGYLAPE-------YALYGQLTEKSDVYSFGIVILELMSGRK 494
GQ + +GT G+ APE +LT D++S G V ++S K
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 377 GDHISNALTRKQLAWPQRK--KIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA 434
G+ S R A+ +R+ +I + + + YLH I HRD+K N+L S+
Sbjct: 144 GELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPN 200
Query: 435 ---KVADFGLAKQSLEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILELMS 491
K+ DFG AK++ S LTT Y Y+APE + + D +S G++ L+
Sbjct: 201 AILKLTDFGFAKETTSHNS-LTTPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLC 258
Query: 492 G 492
G
Sbjct: 259 G 259
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 366 LVYDFMPSGSLGDHISNALTRKQLAWPQRKKI--ILDVAKGLAYLHYGLKPAIYHRDIKS 423
+ + + GSLG L ++ P+ + + + +GL YLH I H D+K+
Sbjct: 127 IFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 178
Query: 424 TNILLDSE-MKAKVADFGLA---KQSLEGQSHLTT-RVAGTYGYLAPEYALYGQLTEKSD 478
N+LL S+ +A + DFG A + G+S LT + GT ++APE + K D
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 479 VYSFGIVILELMSG 492
++S ++L +++G
Sbjct: 239 IWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 366 LVYDFMPSGSLGDHISNALTRKQLAWPQRKKI--ILDVAKGLAYLHYGLKPAIYHRDIKS 423
+ + + GSLG L ++ P+ + + + +GL YLH I H D+K+
Sbjct: 141 IFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 192
Query: 424 TNILLDSE-MKAKVADFGLA---KQSLEGQSHLTT-RVAGTYGYLAPEYALYGQLTEKSD 478
N+LL S+ +A + DFG A + G+S LT + GT ++APE + K D
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 252
Query: 479 VYSFGIVILELMSG 492
++S ++L +++G
Sbjct: 253 IWSSCCMMLHMLNG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 366 LVYDFMPSGSLGDHISNALTRKQLAWPQRKKI--ILDVAKGLAYLHYGLKPAIYHRDIKS 423
+ + + GSLG L ++ P+ + + + +GL YLH I H D+K+
Sbjct: 143 IFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 194
Query: 424 TNILLDSE-MKAKVADFGLA---KQSLEGQSHLTT-RVAGTYGYLAPEYALYGQLTEKSD 478
N+LL S+ +A + DFG A + G+S LT + GT ++APE + K D
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 254
Query: 479 VYSFGIVILELMSG 492
++S ++L +++G
Sbjct: 255 IWSSCCMMLHMLNG 268
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+L+D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 32/134 (23%)
Query: 389 LAWPQRKKIILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEMKA-KVADFGLAKQSLE 447
L++ + ++ +L++ K L +H + I HRD+K +N L + +K + DFGLA+ + +
Sbjct: 114 LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170
Query: 448 GQSHLTTRV---------------------------AGTYGYLAPEYALY-GQLTEKSDV 479
+ L V AGT G+ APE T D+
Sbjct: 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM 230
Query: 480 YSFGIVILELMSGR 493
+S G++ L L+SGR
Sbjct: 231 WSAGVIFLSLLSGR 244
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 142 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 197
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 198 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 257 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 290
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELM 490
A Y + PE + Q+ + S D++S G ++ ++
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 136 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 191
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 192 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 251 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 284
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELM 490
A Y + PE + Q+ + S D++S G ++ ++
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELM 490
A Y + PE + Q+ + S D++S G ++ ++
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELM 490
A Y + PE + Q+ + S D++S G ++ ++
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 135 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 190
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 191 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 250 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 283
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 192
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 193 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 252 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 285
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 398 ILDVAKGLAYLHYGLKPAIYHRDIKSTNILLDSEM-KAKVADFGLAKQSLEGQSHLTTRV 456
+ ++ K L Y H I HRD+K N+++D E K ++ D+GLA+ GQ + RV
Sbjct: 136 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRV 191
Query: 457 AGTYGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLETSNSSFLLITDWAWMLAN 515
A Y + PE + Q+ + S D++S G ++ ++ ++ + ++ + A +L
Sbjct: 192 ASRY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
Query: 516 SGKVDEIFDEF----------IREEGSRAVMERFV 540
D I D++ I SR ERFV
Sbjct: 251 EDLYDYI-DKYNIELDPRFNDILGRHSRKRWERFV 284
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,121,615
Number of Sequences: 62578
Number of extensions: 637774
Number of successful extensions: 3935
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 1686
Number of HSP's gapped (non-prelim): 1106
length of query: 614
length of database: 14,973,337
effective HSP length: 105
effective length of query: 509
effective length of database: 8,402,647
effective search space: 4276947323
effective search space used: 4276947323
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)