BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036082
(315 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 207/262 (79%), Gaps = 28/262 (10%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN GEIDP G+I AAPYRWG++VIAYKKSKF++H LAPIEDW DLWRPELAGRI
Sbjct: 124 KVYLRRNHEGEIDPEGEIWAAPYRWGSMVIAYKKSKFQEHKLAPIEDWADLWRPELAGRI 183
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SMV+SPREV+GS+ AVQ NLALL Q S ++LK F
Sbjct: 184 SMVDSPREVVGSVLKYMGASYNTKNIDLQVPGGKNAVQQNLALLGKQVRLFDSMYYLKTF 243
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
+GD WVAVGWSSDVLP K MSNVAVV PKSG SLWADLWAIPAA++LET QIGGR+RG
Sbjct: 244 SMGDAWVAVGWSSDVLPIAKRMSNVAVVVPKSGTSLWADLWAIPAATKLETNQIGGRIRG 303
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQWIEFCLQ ARALPFKQEVIPGA+PSA+E++++++P EL KGKP LDTNLIAGV
Sbjct: 304 PSPLIHQWIEFCLQAARALPFKQEVIPGATPSAIENSVIEVPKELTKGKPKLDTNLIAGV 363
Query: 214 PPAEILARFEFLEPLSEATLSD 235
PP EIL + EFLEPL +ATLSD
Sbjct: 364 PPPEILTKCEFLEPLPDATLSD 385
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/272 (68%), Positives = 209/272 (76%), Gaps = 29/272 (10%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN G IDP G+I APYRWG++VIAYKKSKF+K+ LAPIEDW DLWRP+L GRI
Sbjct: 207 KVYLRRNCEGSIDPNGEIWGAPYRWGSMVIAYKKSKFQKNKLAPIEDWADLWRPDLKGRI 266
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SM++SPREV+G++ AVQ NLAL Q S H+LKAF
Sbjct: 267 SMIDSPREVVGAVLKYMGASYNAKDIELEVHGGKSAVQENLALFGKQVRLFDSMHYLKAF 326
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSDVLP K MSN+AVV PKSG+SLWADLWAIPAASRL T +IGGRVRG
Sbjct: 327 GVGDVWVAVGWSSDVLPVAKRMSNIAVVVPKSGSSLWADLWAIPAASRLATNRIGGRVRG 386
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQWIEFCLQ ARA+PFKQEVIPGASPSALEST V++P EL +GKP LDTNLIAGV
Sbjct: 387 PSPLIHQWIEFCLQAARAMPFKQEVIPGASPSALESTPVEVPEELTRGKPRLDTNLIAGV 446
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGSGQ 245
PP EIL+R EFLEPLS+A L D W I S Q
Sbjct: 447 PPPEILSRCEFLEPLSDAQLLDYK-WLIASMQ 477
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/266 (68%), Positives = 204/266 (76%), Gaps = 29/266 (10%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN GE+D GKI AAPYRWG++VIAYKKSKF KH LAPIEDW DLWRPELAGRI
Sbjct: 254 KVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLWRPELAGRI 313
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SM++SPREV+G++ AVQ NL LLA Q S H++KA
Sbjct: 314 SMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVRCFDSTHYIKAL 373
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLE-TKQIGGRVR 152
+GDVWVAVGWSSDVLPA K MSNVAV VPKSGASLWADLWAIP+ S+LE ++QIGGRVR
Sbjct: 374 SVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKLERSRQIGGRVR 433
Query: 153 GLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
G SP+IHQWIEFCLQ ARA PF +EVIPGASPSA+E V+ P EL KGKP L+TNLIAG
Sbjct: 434 GPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKGKPKLETNLIAG 493
Query: 213 VPPAEILARFEFLEPLSEATLSDMSG 238
+PP EILA EFLEPLS+ATLSD G
Sbjct: 494 MPPPEILAHCEFLEPLSDATLSDYRG 519
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 201/265 (75%), Gaps = 29/265 (10%)
Query: 3 VYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 62
V +RN GE+D GKI AAPYRWG++VIAYKKSKF KH LAPIEDW DLWRPELAGRIS
Sbjct: 577 VIFKRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLWRPELAGRIS 636
Query: 63 MVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAFG 95
M++SPREV+G++ AVQ NL LLA Q S H++KA
Sbjct: 637 MIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVRCFDSTHYIKALS 696
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLE-TKQIGGRVRG 153
+GDVWVAVGWSSDVLPA K MSNVAV VPKSGASLWADLWAIP+ S+LE ++QIGGRVRG
Sbjct: 697 VGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKLERSRQIGGRVRG 756
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SP+IHQWIEFCLQ ARA PF +EVIPGASPSA+E V+ P EL KGKP L+TNLIAG+
Sbjct: 757 PSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKGKPKLETNLIAGM 816
Query: 214 PPAEILARFEFLEPLSEATLSDMSG 238
PP EILA EFLEPLS+ATLSD G
Sbjct: 817 PPPEILAHCEFLEPLSDATLSDYRG 841
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 203/262 (77%), Gaps = 29/262 (11%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+V LRRN GEIDP GKI +APYRWG +VIAY K KFRK+NLAP+EDW DLW PEL GRI
Sbjct: 246 KVLLRRNSEGEIDPEGKIWSAPYRWGCMVIAYNKVKFRKNNLAPMEDWSDLWCPELRGRI 305
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ A+ NL LLA Q SAH+LKAF
Sbjct: 306 SMVDSPREVIGAVLKYMGASYNTENISSQIPGGRDAIHQNLTLLAKQVRLFDSAHYLKAF 365
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
+GDVWVAVGWSSDVLP VK MSN+AVV PKSG+SLWADLWAIPA SR+ET+ IGGRVRG
Sbjct: 366 AVGDVWVAVGWSSDVLPVVKRMSNIAVVVPKSGSSLWADLWAIPATSRIETEPIGGRVRG 425
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPL HQWIEFCLQTARALPFKQEV+PGASP+A+E +V +P EL +GKP LDTNLI GV
Sbjct: 426 PSPLFHQWIEFCLQTARALPFKQEVVPGASPAAIEGPVV-VPKELFEGKPKLDTNLIGGV 484
Query: 214 PPAEILARFEFLEPLSEATLSD 235
PP++IL + EFL+PLS++TL+D
Sbjct: 485 PPSDILEKCEFLQPLSDSTLAD 506
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/290 (62%), Positives = 215/290 (74%), Gaps = 36/290 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN GE+DP+G I AAPYRWG +VIAYK +KF+KH LAP+EDW DLWRP+LAGRI
Sbjct: 253 KVYLRRNREGEMDPKGDIWAAPYRWGCMVIAYKTNKFQKHKLAPVEDWADLWRPDLAGRI 312
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ AV+ NLALLA Q S+++LKAF
Sbjct: 313 SMVDSPREVIGAVLKYMGASYNTNDINMEVNGGRDAVKHNLALLAKQVRLFDSSNYLKAF 372
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSD++PA K MSNVAVV PKSGASLWADLWAIPAASR++T +IGGR+RG
Sbjct: 373 GVGDVWVAVGWSSDIIPAAKRMSNVAVVVPKSGASLWADLWAIPAASRIQTNRIGGRIRG 432
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQWIEFCLQ+ARALPFKQEVIPGASPS L+ +P EL KG P L+ NL+ G
Sbjct: 433 PSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTKGGPRLNGNLVDGA 492
Query: 214 PPAEILARFEFLEPLSEATLSDM-----SGWEIGSG---QLGQSITSLVK 255
PP +IL + EFLEPLS +TLSD S E G G ++ Q+I S+ K
Sbjct: 493 PPPDILEKCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHKMYQNIISVAK 542
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 210/289 (72%), Gaps = 36/289 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN GE+DP G I AAPYRWG +VIAYK + F+KH LAPIEDW DLWRP+LAGRI
Sbjct: 253 KVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIEDWADLWRPDLAGRI 312
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
SMV+SPREV+G++ AV+ NLALLA Q S ++LKAF
Sbjct: 313 SMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALLAKQVRLFDSENYLKAF 372
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSD++P K MSNVAV VPKSGASLWADLWAIPAAS+++T +IGGRVRG
Sbjct: 373 GVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIPAASKIQTSRIGGRVRG 432
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQWIEFCLQ+ARALPFKQEVIPGASP L+ + EL KG+P L TNLI G
Sbjct: 433 PSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTNVALELTKGRPRLVTNLIDGA 492
Query: 214 PPAEILARFEFLEPLSEATLSDM-----SGWEIGSG---QLGQSITSLV 254
PP +IL R EFLEPLS + +SD S E G+G ++ Q I+SLV
Sbjct: 493 PPPDILERCEFLEPLSNSAVSDYHWLLASIQEPGNGLIHKMRQYISSLV 541
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 212/290 (73%), Gaps = 36/290 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+VYLRRN GEIDP+G I A+PYRWG +VIAYK +KF+KH LAP+EDW DLWRP+LAGRI
Sbjct: 209 KVYLRRNCEGEIDPKGDIWASPYRWGCMVIAYKTNKFQKHKLAPVEDWADLWRPDLAGRI 268
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
MV+SPREV+G++ V+ NLALLA Q S+++LKAF
Sbjct: 269 LMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDVVKHNLALLAKQVRLFDSSNYLKAF 328
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GD WVAVGWSSD++PA K MSNVAVV PKSG SLWADLWAIPAASR++T +IGGR+RG
Sbjct: 329 GVGDAWVAVGWSSDIIPAAKRMSNVAVVVPKSGVSLWADLWAIPAASRIQTNRIGGRIRG 388
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQWIEFCLQ+ARALPFKQEVIPGASPS L+ +P EL KG P ++ NL+ G
Sbjct: 389 PSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTKGGPRINGNLVDGA 448
Query: 214 PPAEILARFEFLEPLSEATLSDM-----SGWEIGSG---QLGQSITSLVK 255
PP +IL R EFLEPLS +TLSD S E G G ++ Q+I S+VK
Sbjct: 449 PPPDILERCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHKMYQNIISVVK 498
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 192/265 (72%), Gaps = 30/265 (11%)
Query: 1 SRVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR 60
S++YLRRN AGE P G+ A PYRWGT+VIAYKKSKF+ + LAPIEDW DLWRPELAGR
Sbjct: 218 SQIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGR 277
Query: 61 ISMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKA 93
I+MVNSPREV+G++ AV+ NLA L Q S ++LKA
Sbjct: 278 IAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQIRLFDSNNYLKA 337
Query: 94 FGIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASR--LETKQIGGR 150
F +GDVWV VGWSSDV+P K MSNV V VPKSGA+LWADLWAIPA S E +Q GGR
Sbjct: 338 FNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGR 397
Query: 151 VRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLI 210
VRG SPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ LV P + K + LDTNL+
Sbjct: 398 VRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLV 457
Query: 211 AGVPPAEILARFEFLEPLSEATLSD 235
GVPP EIL++ EFLEPL EATLS+
Sbjct: 458 TGVPPPEILSKCEFLEPLPEATLSE 482
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 190/262 (72%), Gaps = 28/262 (10%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+V+LRRN GE D G + APYRWGTVVIAYKKSKF++HNL PI+DW+DLWRPELAG+I
Sbjct: 232 KVHLRRNQNGEADSNGSVWGAPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKI 291
Query: 62 SMVNSPREVIGSIA---------------------------VQLNLALLANQSAHHLKAF 94
SMV+SPREVIG++ VQL + S ++LK+F
Sbjct: 292 SMVDSPREVIGAVLKRLGSSYNTIDMETEVSGGREAILNSFVQLQKQVQLFDSMNYLKSF 351
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWV VGWSSDV+PA K MSNVAVV PKSG+SLWADLWAIP A+R +T +IGGR RG
Sbjct: 352 GVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGRTRG 411
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQW +FCLQ+AR+LPF+QE+IPGASP LE+ ++P ++ K KP L+TNL+ GV
Sbjct: 412 PSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLENPAPEVPQDVNKRKPKLETNLVRGV 471
Query: 214 PPAEILARFEFLEPLSEATLSD 235
PP EIL R EFLEPL + L D
Sbjct: 472 PPPEILERCEFLEPLPDKVLGD 493
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 191/264 (72%), Gaps = 30/264 (11%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
++YLRRN AGE P G+ A PYRWGT+VIAYKKSKF+ + LAPIEDW DLWRPELAGRI
Sbjct: 217 KIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRI 276
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
+MVNSPREV+G++ AV+ NLA L Q S ++LKAF
Sbjct: 277 AMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQIRLFDSNNYLKAF 336
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASR--LETKQIGGRV 151
+GDVWV VGWSSDV+P K MSNV V VPKSGA+LWADLWAIPA S E +Q GGRV
Sbjct: 337 NVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGRV 396
Query: 152 RGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIA 211
RG SPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ LV P + K + LDTNL+
Sbjct: 397 RGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLVT 456
Query: 212 GVPPAEILARFEFLEPLSEATLSD 235
GVPP EIL++ EFLEPL EATLS+
Sbjct: 457 GVPPPEILSKCEFLEPLPEATLSE 480
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 191/264 (72%), Gaps = 30/264 (11%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
++YLRRN AGE P G+ A PYRWGT+VIAYKKSKF+ + LAPIEDW DLWRPELAGRI
Sbjct: 217 KIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRI 276
Query: 62 SMVNSPREVIGSI----------------------AVQLNLALLANQ-----SAHHLKAF 94
+MVNSPREV+G++ AV+ NLA L Q S ++LKAF
Sbjct: 277 AMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEENLASLMKQIRLFDSNNYLKAF 336
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASR--LETKQIGGRV 151
+GDVWV VGWSSDV+P K MSNV V VPKSGA+LWADLWAIPA S E +Q GGRV
Sbjct: 337 NVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGRV 396
Query: 152 RGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIA 211
RG SPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ LV P + K + LDTNL+
Sbjct: 397 RGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLVT 456
Query: 212 GVPPAEILARFEFLEPLSEATLSD 235
GVPP EIL++ EFLEPL EATLS+
Sbjct: 457 GVPPPEILSKCEFLEPLPEATLSE 480
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 201/306 (65%), Gaps = 39/306 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+V+L RN GE DP G I PYRWGT+VIAYKK KF++HNL PI+DW+DLWRPELAGRI
Sbjct: 236 KVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKDKFKRHNLKPIQDWEDLWRPELAGRI 295
Query: 62 SMVNSPREVIGSIA---------------------------VQLNLALLANQSAHHLKAF 94
SMV+SPREVIG++ QL + S ++LK+F
Sbjct: 296 SMVDSPREVIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNSFTQLQKQVQLFDSMNYLKSF 355
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
+GDVWVAVGWSSDV+PA K MSNVAVV PKSG+SLWADLWAIP A+R +T QIG R RG
Sbjct: 356 SVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDQIGSRARG 415
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPL+HQW +FCLQ+AR+LPF+Q+VIPGASP LES + ++P + K KP LDTNL+ GV
Sbjct: 416 PSPLVHQWFDFCLQSARSLPFRQDVIPGASPLHLESPVPEVPQDKNKRKPKLDTNLVRGV 475
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGSGQLGQSITSLVKEASAALYITGCTEMAEVL 273
PP EIL R EFLEPLS L D Q + S V+ L+ +M+ VL
Sbjct: 476 PPPEILERCEFLEPLSGKALEDY-----------QWLMSRVQRPRLGLFGNMLQKMSAVL 524
Query: 274 EVLRET 279
+ R +
Sbjct: 525 DFKRRS 530
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 205/294 (69%), Gaps = 38/294 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+++L RN GE+DP G I A PYRWGTVVIAYKK+KF++HNL PI+DW DLWRPELAG+I
Sbjct: 128 KIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKI 187
Query: 62 SMVNSPREVIGSIAVQL----------------------NLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ L +L L NQ S ++LK+F
Sbjct: 188 SMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSF 247
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSDV+PA K MS+VAVV PKSG+SLWADLWAIP+A++ +T +IGGR RG
Sbjct: 248 GVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRG 307
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P E K KP L+TNL+ G
Sbjct: 308 PSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGA 367
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGS---------GQLGQSITSLVKEAS 258
PP EIL + EFLEPLSE L D W I G L Q+I+S++ S
Sbjct: 368 PPLEILEKCEFLEPLSEKALDDYQ-WLITRMQRPNRGLFGNLLQNISSVLNFKS 420
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 205/294 (69%), Gaps = 38/294 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+++L RN GE+DP G I A PYRWGTVVIAYKK+KF++HNL PI+DW DLWRPELAG+I
Sbjct: 73 KIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKI 132
Query: 62 SMVNSPREVIGSIAVQL----------------------NLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ L +L L NQ S ++LK+F
Sbjct: 133 SMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSF 192
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSDV+PA K MS+VAVV PKSG+SLWADLWAIP+A++ +T +IGGR RG
Sbjct: 193 GVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRG 252
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P E K KP L+TNL+ G
Sbjct: 253 PSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGA 312
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGS---------GQLGQSITSLVKEAS 258
PP EIL + EFLEPLSE L D W I G L Q+I+S++ S
Sbjct: 313 PPLEILEKCEFLEPLSEKALDDYQ-WLITRMQRPNRGLFGNLLQNISSVLNFKS 365
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 205/294 (69%), Gaps = 38/294 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+++L RN GE+DP G I A PYRWGTVVIAYKK+KF++HNL PI+DW DLWRPELAG+I
Sbjct: 243 KIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKI 302
Query: 62 SMVNSPREVIGSIAVQL----------------------NLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ L +L L NQ S ++LK+F
Sbjct: 303 SMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSF 362
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSDV+PA K MS+VAVV PKSG+SLWADLWAIP+A++ +T +IGGR RG
Sbjct: 363 GVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRG 422
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P E K KP L+TNL+ G
Sbjct: 423 PSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGA 482
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGS---------GQLGQSITSLVKEAS 258
PP EIL + EFLEPLSE L D W I G L Q+I+S++ S
Sbjct: 483 PPLEILEKCEFLEPLSEKALDDYQ-WLITRMQRPNRGLFGNLLQNISSVLNFKS 535
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 205/294 (69%), Gaps = 38/294 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+++L RN GE+DP G I A PYRWGTVVIAYKK+KF++HNL PI+DW DLWRPELAG+I
Sbjct: 243 KIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKI 302
Query: 62 SMVNSPREVIGSIAVQL----------------------NLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ L +L L NQ S ++LK+F
Sbjct: 303 SMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSF 362
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWVAVGWSSDV+PA K MS+VAVV PKSG+SLWADLWAIP+A++ +T +IGGR RG
Sbjct: 363 GVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRG 422
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P E K KP L+TNL+ G
Sbjct: 423 PSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGA 482
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGS---------GQLGQSITSLVKEAS 258
PP EIL + EFLEPLSE L D W I G L Q+I+S++ S
Sbjct: 483 PPLEILEKCEFLEPLSEKALDDYQ-WLITRMQRPNRGLFGNLLQNISSVLNFKS 535
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/304 (52%), Positives = 199/304 (65%), Gaps = 39/304 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+V+L RN GE DP G I PYRWGT+VIAYKK+KF++HNL PI+DW+DLWRPELAGRI
Sbjct: 237 KVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKNKFKRHNLKPIQDWEDLWRPELAGRI 296
Query: 62 SMVNSPREVIGSIA---------------------------VQLNLALLANQSAHHLKAF 94
SMV+SPRE+IG++ QL + S +LK+F
Sbjct: 297 SMVDSPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNSFTQLQKQVQLFDSMDYLKSF 356
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
+GDVWVAVGWSSDV+PA K MSNVAVV PKSG+S+WADLWAIP A+R +T QIG R RG
Sbjct: 357 SVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADLWAIPCATRFQTDQIGSRTRG 416
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQW +FCLQ+AR+LPF+Q+VIPGASP LE+ + ++P + K KP L+TNL+ GV
Sbjct: 417 PSPLIHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPEVPQDKNKRKPKLETNLVRGV 476
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGSGQLGQSITSLVKEASAALYITGCTEMAEVL 273
PP EIL R EFLEPLS L D Q + S V+ + +M+ VL
Sbjct: 477 PPPEILERCEFLEPLSGKALEDY-----------QWLMSKVQRPRLGFFGNVLQKMSAVL 525
Query: 274 EVLR 277
+ R
Sbjct: 526 DFKR 529
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 189/262 (72%), Gaps = 30/262 (11%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
++YL RN AGE P G+ A PYRWGT+VIAYKKSKF+ + LAPIEDW DLWRPELAGRI
Sbjct: 216 KIYLCRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRI 275
Query: 62 SMVNSPREVIGS----------------------IAVQLNLALLANQ-----SAHHLKAF 94
+MVNSPREV+G+ IAV+ NLA L Q S ++LKAF
Sbjct: 276 AMVNSPREVVGAVLKYMGASYNTTDLDSQVPGGRIAVEKNLASLMKQIRLFDSNNYLKAF 335
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASR--LETKQIGGRV 151
+GDVWV VGWSSDV+P K MSNV V VPKSGA+LWADLWAIPA S E +QIGGRV
Sbjct: 336 NVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQIGGRV 395
Query: 152 RGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIA 211
RG SPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ LV+ P + K + LDTNL+
Sbjct: 396 RGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPLVREPEKTKKDRTKLDTNLVT 455
Query: 212 GVPPAEILARFEFLEPLSEATL 233
GVP EIL++ EFLEPL EATL
Sbjct: 456 GVPLPEILSKCEFLEPLPEATL 477
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 201/302 (66%), Gaps = 39/302 (12%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+V+L RN GE D G + PYRWGTVVIAYKKSKF++HNL PI+DW+DLWRPELAG+I
Sbjct: 237 KVHLCRNQNGEADSSGSVWGVPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKI 296
Query: 62 SMVNSPREVIGSIAVQL----------------------NLALLANQ-----SAHHLKAF 94
SMV+SPREVIG++ QL + L Q S ++LK+F
Sbjct: 297 SMVDSPREVIGAVLKQLGSSYNTIDMETEVNGGREAVLNSFTQLQKQVQLFDSMNYLKSF 356
Query: 95 GIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRG 153
G+GDVWV VGWSSDV+PA K MSNVAVV PKSG+SLWADLWAIP A+R +T +IGGR RG
Sbjct: 357 GVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGRTRG 416
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
SPLIHQW +FCLQ+AR+LPF+QE+IPGASP LE +P + K +P L+TNL+ GV
Sbjct: 417 PSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLEHPAPDVPQDRNKKQPKLETNLVRGV 476
Query: 214 PPAEILARFEFLEPLSEATLSDMSGWEIGSGQLGQSITSLVKEASAALYITGCTEMAEVL 273
PP EIL + EFLEPLS+ + D Q + S V+ + L+ ++ VL
Sbjct: 477 PPPEILEKCEFLEPLSDKAVGDY-----------QWLMSRVQRPRSGLFGNVLQRISTVL 525
Query: 274 EV 275
++
Sbjct: 526 DL 527
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 167/274 (60%), Gaps = 42/274 (15%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
++RR+ G I+P+G + PYRWG++V A+KK K ++ ++PI DWKDL++P+LAGRI+M
Sbjct: 125 FIRRDPEGIINPQGLVWGVPYRWGSLVFAFKKDKLERNGISPIRDWKDLFQPQLAGRIAM 184
Query: 64 VNSPREVIGSIAVQLNLALLAN---------------------------QSAHHLKAFGI 96
V+SPREV+G++ L + N +LKA
Sbjct: 185 VDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKERFLALQKQVRLFDDNDYLKAMSA 244
Query: 97 GDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLE-TKQIGGRVRGL 154
GDVWVAVGWSSD++P K SN++V P+SG SLWADLWAIPA + E + +GGRVRG
Sbjct: 245 GDVWVAVGWSSDIIPYSKRASNISVYAPESGTSLWADLWAIPATTTFEKAENVGGRVRGP 304
Query: 155 SPLIHQWIEFCLQTARALPFKQEVIPGASPSAL---------ESTLVKLPGELLKGKP-- 203
SPL+ QW++FCLQ ARA F +V GASP E+T ++ KP
Sbjct: 305 SPLVFQWLDFCLQPARATTFANDVFVGASPLTWSEKSETEISENTFLETGASQSGKKPKT 364
Query: 204 --SLDTNLIAGVPPAEILARFEFLEPLSEATLSD 235
+LD+N++ G+PP EI+A+ EFLEPLS+ LSD
Sbjct: 365 VVTLDSNIVQGMPPDEIVAKSEFLEPLSDKALSD 398
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/257 (49%), Positives = 160/257 (62%), Gaps = 29/257 (11%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
LRR+ G D G++ APYR G +VIAY+K K K L I+DW DLW+PELAGRISM+
Sbjct: 124 LRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLWKPELAGRISMI 183
Query: 65 NSPREVIGSI---------AVQLNLALLANQSA-----------------HHLKAFGIGD 98
S REV+G + A L+ + Q A ++L+A G GD
Sbjct: 184 ESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQAMFDNINYLRALGAGD 243
Query: 99 VWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
VW+AVGWS+DVLP K SNV V+ P SG SLWAD+WAIPAA ++++ + GGR+RG SPL
Sbjct: 244 VWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAAIKIKSDKAGGRIRGPSPL 303
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ QW+EFCLQ AR+L F QE GASP L V G P LDTNL++G+PP +
Sbjct: 304 VSQWLEFCLQPARSLAFHQEAFCGASP--LRFADVADNGSSEPAGPRLDTNLVSGLPPKD 361
Query: 218 ILARFEFLEPLSEATLS 234
IL + EFLEPL E TL+
Sbjct: 362 ILGKSEFLEPLEEETLA 378
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/257 (48%), Positives = 160/257 (62%), Gaps = 29/257 (11%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
LRR+ G D G++ APYR G +VIAY+K K K L I+DW DLW+PELAG+ISM+
Sbjct: 124 LRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLWKPELAGKISMI 183
Query: 65 NSPREVIGSI---------AVQLNLALLANQSA-----------------HHLKAFGIGD 98
S REV+G + A L+ + Q A ++L+A G GD
Sbjct: 184 ESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQAMFENINYLRALGAGD 243
Query: 99 VWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
VW+AVGWS+DVLP K SNV V+ P SG SLWAD+WAIPAA+ +++ + GGR+RG SPL
Sbjct: 244 VWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAATTIKSDKAGGRIRGPSPL 303
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ QW+EFCLQ AR+L F QE GASP L V G P LDTNL++G+PP +
Sbjct: 304 VSQWLEFCLQPARSLAFHQEAFCGASP--LRFADVADNGSSEPAGPRLDTNLVSGLPPKD 361
Query: 218 ILARFEFLEPLSEATLS 234
IL + EFLEPL E TL+
Sbjct: 362 ILGKSEFLEPLEEETLA 378
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 133/258 (51%), Gaps = 57/258 (22%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++RN+ G +DP+GKI AAPY+WGT +IAY+ KF+ P +DW DLWRPEL G IS++
Sbjct: 136 VKRNNQGYVDPQGKIWAAPYQWGTTLIAYRVDKFKALGWEP-KDWSDLWRPELKGNISLL 194
Query: 65 NSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
N REVIG + V+LN + S ++L+ IGD W+A
Sbjct: 195 NQAREVIGLTLKKLGKSYNTKNIDQVEKLKAELVKLNQQVKFYSSNNYLQPLIIGDTWLA 254
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP +K + AVVP+SG +LWA+LW PAAS + L +W
Sbjct: 255 VGWSNDILPLLKKRKKIAAVVPQSGTALWANLWVKPAASPENS------------LTEKW 302
Query: 162 IEFCLQTARALPF------KQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPP 215
I FC Q A ++P +P+ L S + P LL P
Sbjct: 303 INFCWQPQVAQQMSIITQTSSPIMPKINPNELISDIKNNPLLLL---------------P 347
Query: 216 AEILARFEFLEPLSEATL 233
EI+ + EFL PL+ +T+
Sbjct: 348 QEIIEKSEFLAPLANSTI 365
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 132/251 (52%), Gaps = 45/251 (17%)
Query: 6 RRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVN 65
+RN+ G + P G + APYRWGT VIAY+K KF ++ L P +DW DLW+P L GR+S+++
Sbjct: 143 QRNEQGLVSPAGSVWGAPYRWGTTVIAYRKDKFERNGLRPPQDWADLWQPGLRGRLSLLD 202
Query: 66 SPREVIGSI----------------------AVQLNLALLANQSAHHLKAFGIGDVWVAV 103
REVIG + A L+ + S +L+ +GD W AV
Sbjct: 203 QEREVIGLVLKKLGQSYNVADPTTVTGLVEEARSLHQQVKFYNSTAYLEPLLLGDTWAAV 262
Query: 104 GWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWI 162
GWS+DVLP ++ ++A VVP+SG +LWAD+W AA E Q L+++WI
Sbjct: 263 GWSTDVLPLLESQRHLAVVVPQSGTALWADVWVQAAAPASEAVQ---------DLMNEWI 313
Query: 163 EFCLQTARALPFK--QEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILA 220
+FC A A F + PS STL + SL N I +PP E+L
Sbjct: 314 DFCWNPAIAGQFSLVSRAVSPIVPSLDRSTLPQ----------SLQDNSIL-LPPPEVLE 362
Query: 221 RFEFLEPLSEA 231
R EFLEPL EA
Sbjct: 363 RCEFLEPLPEA 373
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 134/253 (52%), Gaps = 40/253 (15%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++RN+ G++D GKI APYRWG+ VIAY+K KF+ P +W DLWR E GRIS++
Sbjct: 140 VQRNEQGQLDAAGKIWGAPYRWGSTVIAYRKDKFKSLGWTPT-NWSDLWREECKGRISLL 198
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
+ PRE+IG L NL + N S +L+ +GD W+A
Sbjct: 199 DQPREIIGLTLKHLGYSYNTTNLDEIKNLKDALKKLHQNVKLYSSDTYLQPLILGDTWLA 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+DVL A+K + AVVP+SG +LWAD+W P +L + L L QW
Sbjct: 259 VGWSTDVLKAIKSEPKIAAVVPQSGTALWADVWVRP---KLASANSTSDTPNLQTLADQW 315
Query: 162 IEFCLQ--TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
I+FC Q +A A+ E + SP + +P +L+K + L P +I+
Sbjct: 316 IDFCWQPKSASAISIFTEAV---SPVLINMDGNDIPKDLVKNQLLL--------PNKQII 364
Query: 220 ARFEFLEPLSEAT 232
+ EFL PLS+AT
Sbjct: 365 QKSEFLHPLSKAT 377
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 131/251 (52%), Gaps = 36/251 (14%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+ +RRN G++DP G++ APYRWGT VIAY+ +FR P +DW DLWRPEL R+
Sbjct: 163 QTLVRRNAEGQLDPEGQVWGAPYRWGTTVIAYRVDRFRNLGWTP-QDWSDLWRPELRDRL 221
Query: 62 SMVNSPREVIGSI-----------------AVQLNLALLANQ-----SAHHLKAFGIGDV 99
S+++SPREVIG +Q L L Q S +L+ +GD
Sbjct: 222 SLLDSPREVIGLTLKTLGHSYNRDRLDDLPELQEQLLALHRQARLYSSDAYLQPLLLGDT 281
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
WVAVGWS+D+L ++ + AVVP SG +LW++LW PA + S L
Sbjct: 282 WVAVGWSTDILATMQRNPQIRAVVPPSGTALWSELWVRPAGPNPVNPETPTPA---SSLA 338
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+QWI FC A+ Q + ASP L +LP +L TN I +P AE
Sbjct: 339 NQWINFCWNPEMAVQLSQ-LSKAASPMLLNRDRGELPN-------ALQTNGIL-LPTAEA 389
Query: 219 LARFEFLEPLS 229
+A EF+EPL+
Sbjct: 390 IANSEFIEPLT 400
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 139/276 (50%), Gaps = 57/276 (20%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRN AG+ D +G + AAPYRWG VIAY + KF+ N P +DW DLWR EL RIS+
Sbjct: 146 VRRNQAGQFDAKGDVWAAPYRWGYTVIAYNRDKFQSLNWKP-QDWGDLWREELRDRISLP 204
Query: 65 NSPREVIG-------------------SIAVQLNL---ALLANQSAHHLKAFGIGDVWVA 102
N PREVIG + VQLN + S +L+ +GD W+A
Sbjct: 205 NHPREVIGLTLKYLGKSYNTENPSQVPDLTVQLNRLQPQVKLYSSDTYLQPLILGDTWLA 264
Query: 103 VGWSSDVLPAV-KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D++P + +H A++P+SG SLWADLWA P + + L +QW
Sbjct: 265 VGWSNDIIPVMQRHRQIAAIIPQSGTSLWADLWANPIQANSDRA-----------LEYQW 313
Query: 162 IEFCLQTARALPFKQEVIPG--ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
I+FC Q A +Q ++ G SP + + EL +P L VP IL
Sbjct: 314 IDFCWQPQIA---RQILLFGRTNSPIPFQIDPENIQAEL---RPLL-------VPNDNIL 360
Query: 220 ARFEFLEPLS-------EATLSDMSGWEIGSGQLGQ 248
+ EFL PL+ +A +M G GS + G+
Sbjct: 361 DKSEFLRPLTPDAIQQHQALWQEMRGQGAGSREQGK 396
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 130/255 (50%), Gaps = 42/255 (16%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+ +RRND+G D +GKI AAPYRWGT VI Y+ KF+ L P DW DLWR EL RI
Sbjct: 98 QTLVRRNDSGIADEKGKIWAAPYRWGTTVIVYRIDKFKSLGLKPPTDWSDLWREELRDRI 157
Query: 62 SMVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDV 99
S++++PREVIG +L +L +AN S +L+ +GD
Sbjct: 158 SLLDNPREVIGLTLKKLGKSYNTRDLNKVANLKEELSNLHRQTKLYSSNSYLQPLVLGDT 217
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
W AVGWS DVL +++ + AVVP SG S+W DLW P + + LS L+
Sbjct: 218 WAAVGWSGDVLRLMQNQKEIGAVVPISGTSMWVDLWVQP---------VSNQSSNLS-LV 267
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
QWI+FC Q A + +SP + LP +L + L P +E+
Sbjct: 268 EQWIDFCWQPQIATQMSL-LTQASSPVIISMKREDLPEQLRINRLLL--------PESEV 318
Query: 219 LARFEFLEPLSEATL 233
+++ EFL PL + +
Sbjct: 319 ISKSEFLFPLPDVAI 333
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 141/277 (50%), Gaps = 54/277 (19%)
Query: 5 LRRNDAGEID--PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 62
+RRN GE+ P G+I APYRWGT IAY+ +F K P DW+DLWR E GRIS
Sbjct: 122 VRRNPNGELSNSPEGQIWGAPYRWGTTAIAYRVDRFEKLGWTPT-DWQDLWRSECQGRIS 180
Query: 63 MVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVW 100
+++ REVIG +L +L L+ + S ++LK +GD W
Sbjct: 181 LLDQAREVIGLTLKKLGYSYNTPDLDLVPDLKAELEQLHQNVRLYDSNNYLKPLILGDTW 240
Query: 101 VAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
+AVGWS D+ P V+ N+A+ +PKSG +LW+D+W P A+ +PL+
Sbjct: 241 LAVGWSGDISPQVQRQHNIAIAIPKSGTALWSDVWVKPIATSATN----------NPLVQ 290
Query: 160 QWIEFCLQTARALPFKQEVIPGA-SPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
WI+FC Q A + ++ GA SP + LP + L+ P L +P +I
Sbjct: 291 AWIDFCWQPEIAT--QMSLLTGATSPIVWGMSRADLPKD-LRENPQL-------LPDTDI 340
Query: 219 LARFEFLEPLSEATLSDMSGWEIGSGQLGQSITSLVK 255
L R EFL PL+ A++ +L Q I S+V+
Sbjct: 341 LERSEFLLPLTVASMQQYQ-------RLWQQIRSVVR 370
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 126/252 (50%), Gaps = 35/252 (13%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRN G++D G I APYRWGTVVIAY++ KF + P DW DLWRPEL RIS++
Sbjct: 142 VRRNRQGQLDESGLIWGAPYRWGTVVIAYRRDKFEELGWTPT-DWSDLWRPELRDRISLL 200
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
+SPREVIG +L NL+ + N S H+L+ +GD W+A
Sbjct: 201 DSPREVIGLTLKKLGFSYDTANLSQVPNLKTELLDLHKQVKLYSSDHYLEPLVLGDTWLA 260
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+L + AV+P+SG SLWAD+W PA + T L QW
Sbjct: 261 VGWSTDILSLRGRDRQIQAVIPRSGTSLWADVWVQPAVQK--TAAESPEPETSQSLTQQW 318
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC + A+ + ASP + LP L + + L P IL
Sbjct: 319 IDFCWRQQSAIDISL-LSHAASPILVTMNPATLPDSLRQSEILL--------PEPSILED 369
Query: 222 FEFLEPLSEATL 233
EFL PL + +
Sbjct: 370 SEFLYPLPQEAI 381
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 121/251 (48%), Gaps = 43/251 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G + P GKI APYRWG VIAY+ +FR+ PI DWKDLWR EL R+S++
Sbjct: 125 VQRDAQGNLAPNGKIWGAPYRWGNTVIAYRADQFREAGYEPITDWKDLWREELRDRVSLL 184
Query: 65 NSPREVIGSIAVQL-----------------NLALLANQ-----SAHHLKAFGIGDVWVA 102
N PREVIG +L LA L Q S +L+ + D WVA
Sbjct: 185 NQPREVIGFTLKKLGQSYNTSDLEQVPNLKTELATLHQQVKFYSSQAYLQPLVLEDTWVA 244
Query: 103 VGWSSDVLP-AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD+L ++ V+P+SG SLWAD+W P LS + QW
Sbjct: 245 VGWSSDILQLQTRYPDLTTVIPESGTSLWADVWVQPTGK-----------PSLSEAMLQW 293
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I FC + A +SP L + +LP L + + +PP ++ +
Sbjct: 294 INFCWEEQAATQIGL-FTNASSPILLNTKTDQLPESLQQDQ--------LRIPPQTLIEK 344
Query: 222 FEFLEPLSEAT 232
EFL PLS T
Sbjct: 345 SEFLLPLSAQT 355
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 130/247 (52%), Gaps = 43/247 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G + P+G+I APYRWGT +IAY +F K P +DW DLWR EL RI++V
Sbjct: 144 VKRDSKGNLSPQGQIWGAPYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALV 202
Query: 65 NSPREVIG---------------SIAVQLNLALLA-------NQSAHHLKAFGIGDVWVA 102
+ PREVIG S L LLA S H+L+ +GD W++
Sbjct: 203 DQPREVIGLTLKKLGYSYNTTDLSQVSSLTSELLALHKQVKYYSSDHYLQPLVVGDAWLS 262
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD++P V N+ AVVP SG +LW+D+W P + ETK LS L QW
Sbjct: 263 VGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGETK--------LSELTKQW 314
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
++FC Q +A+ + G SP ++ +LP E +K P L + I+ +
Sbjct: 315 LDFCWQD-QAVNQICLLTDGVSPMIYQAK--ELPSE-VKDNPLLFID-------QRIMDK 363
Query: 222 FEFLEPL 228
+F+EPL
Sbjct: 364 CDFIEPL 370
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 126/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G++ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQLQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVA 102
++ REVIG +L + A+ S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNASDLKQVTGLKDQLFALQKQVRFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L L ++P P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLILTENLDQIP-------PDIKNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 102/186 (54%), Gaps = 36/186 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRN+ GE DP+G+I AAPYRWG+ VI Y + KF P DW DLWRPEL RIS+V
Sbjct: 139 VRRNNQGESDPQGQIWAAPYRWGSTVILYNREKFNSLGWTP-NDWSDLWRPELRSRISIV 197
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
+ REVIG +L NL + N S +++ IGD WVA
Sbjct: 198 DQSREVIGLTLKRLGQSYNAQNLDQIPNLEEQLQALHQQVRLYSSNRYIEPLIIGDTWVA 257
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+DVLP ++ +A VVP+SG +LWAD+W P + L T L QW
Sbjct: 258 VGWSTDVLPILRRYREIAVVVPRSGTALWADVWVNPINAALPT------------LASQW 305
Query: 162 IEFCLQ 167
I+FC Q
Sbjct: 306 IDFCWQ 311
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 129/245 (52%), Gaps = 51/245 (20%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN+ G++D +G+I APYRWG +IAY++ K + P +DW+DLW+PE+ R S++N
Sbjct: 149 RNNQGKLDNQGQIWGAPYRWGYTMIAYREDKLQNLGWQP-QDWEDLWKPEIKHRFSLLNQ 207
Query: 67 PREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVAVG 104
PREVIG + +L NL + N S ++L+ +GD W+AVG
Sbjct: 208 PREVIGLVLKKLGYSYNTKNLKQINNLLPELKTLNQQVKFYDSRNYLQPLILGDTWLAVG 267
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+D++P ++ N+ AV+P SG SLWAD+W P E ++ I+ WI+
Sbjct: 268 WSTDIIPLIERYHNIKAVIPLSGTSLWADIWVKPRNQSSELEK-----------IYNWID 316
Query: 164 FCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
FC Q+ A +Q + + S +E+ +TN + E+LA+ E
Sbjct: 317 FCWQSKSA---RQISLFSSGISPVETNFS-------------ETNRQIPLMSPEVLAKSE 360
Query: 224 FLEPL 228
F+EPL
Sbjct: 361 FIEPL 365
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 130/247 (52%), Gaps = 43/247 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G + P+G+I APYRWGT +IAY +F K P +DW DLWR EL RI++V
Sbjct: 144 VKRDSKGNLSPQGQIWGAPYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALV 202
Query: 65 NSPREVIG---------------SIAVQLNLALLA-------NQSAHHLKAFGIGDVWVA 102
+ PREVIG S L LLA S H+L+ +GD W++
Sbjct: 203 DQPREVIGLTLKKLGYSYNTTDLSQVSSLTSELLALHKQVKYYSSDHYLQPLVVGDAWLS 262
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD++P V N+ AVVP SG +LW+D+W P + +TK LS L QW
Sbjct: 263 VGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGDTK--------LSELTKQW 314
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
++FC Q +A+ + G SP ++ +LP E +K P L + I+ +
Sbjct: 315 LDFCWQD-QAVNQICLLTDGVSPMIYQAK--ELPSE-VKDNPLLFID-------QRIMDK 363
Query: 222 FEFLEPL 228
+F+EPL
Sbjct: 364 CDFIEPL 370
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 127/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ AAPYRWG VIAY + KF + + P +DW DLWRPEL+G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWAAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELSGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S H+L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSNLKQVTSLKDQLFALQKQVRFYSSQHYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVDQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I FC Q+ A G SP L ++P P + N + P E + +
Sbjct: 307 INFCWQSESATKISL-FTSGLSPLILTQNPDQIP-------PDIKNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 130/254 (51%), Gaps = 46/254 (18%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN+ G +D +G+I AAPYRWG+ VI Y+K K +K + IEDW DLWR EL GRIS++N
Sbjct: 145 RNNQGLVDKQGQIWAAPYRWGSTVIIYRKDKLKKFDWK-IEDWSDLWREELKGRISLLNQ 203
Query: 67 PREVIGSIAVQL-----------------NLALLANQ-----SAHHLKAFGIGDVWVAVG 104
PREVIG +L L +L Q S ++++ +GD W+AVG
Sbjct: 204 PREVIGLTLKKLGKSYNSENLQSIKSLKEELQVLNQQVKFYNSTNYIEPLILGDTWLAVG 263
Query: 105 WSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+D++ V + VVP SG +LWADLW P + G + L ++WI+
Sbjct: 264 WSNDIVSLVSRYPQLGVVVPNSGTALWADLWVQPKVT-------GKKDETQESLSNKWID 316
Query: 164 FCL--QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
FC Q A+ + + SP E ++P L NL++ P E+ +
Sbjct: 317 FCWKPQIAKQIAV---LTKANSPIDTEIPASEIPKPL--------QNLLSANP--EVFEK 363
Query: 222 FEFLEPLSEATLSD 235
EFL PLS + + +
Sbjct: 364 SEFLLPLSSSAVKE 377
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 127/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+++ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQLETEGKVWGAPYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S H+L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVTGLKDQLFALQKQVRFYSSQHYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P P + N + P E + +
Sbjct: 307 IDFCWQPESANKISL-FTSGLSPLILTENPDQIP-------PDIRNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 128/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+++ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQLETEGKVWGAPYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S H+L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNYSDLKQVTGLKDQLFALQKQVRFYSSQHYLQPLILGDVWLS 258
Query: 103 VGWSSDVLP-AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + +H VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRHNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P P + N + P E + +
Sbjct: 307 IDFCWQPESANKISL-FTSGLSPLILTENPDQIP-------PDIRNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 131/251 (52%), Gaps = 44/251 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++RN G +D +G+I APYRWGT +I Y+ +K + P DW DLWR EL GRIS++
Sbjct: 139 VQRNQLGMVDKQGQIWGAPYRWGTTMIVYRSDILKKFDWQPT-DWSDLWREELQGRISLL 197
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
N PREVIG +L N++L+ N S ++L+ +GD+W+A
Sbjct: 198 NQPREVIGLTLKKLGYSYNTQNISLIPNLKSELFALNKQTKIYSSNYYLQPLILGDIWLA 257
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS++++P + ++ A+VP+SG +LWAD+W P + LS L +W
Sbjct: 258 VGWSNEIIPLLSRRRDLKAIVPQSGTALWADVWVKPTSD-----------VKLSNLAQEW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I FC Q A+ SP L+ KLP KP L+ L+ P IL +
Sbjct: 307 INFCWQPT-AVQQISLYTDAVSPLILDQNSEKLP------KPILNNPLLFIEP--TILNK 357
Query: 222 FEFLEPLSEAT 232
EF++PL ++
Sbjct: 358 SEFIKPLPPSS 368
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 128/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ AAPYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWAAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNYSDLKQVMGLKDQLFALQKRVRFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVEQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P + +K P L V P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLVLTENPDQIPSD-IKNNPLL-------VNP-EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 54/256 (21%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN+ G+ID G+I APYRWG +IAY++ K P +DW DLWR EL +IS+++
Sbjct: 144 RNNQGDIDGNGQIWGAPYRWGYTMIAYREDKIAPLGFTP-KDWSDLWRVELMNQISLLSQ 202
Query: 67 PREVIGSIAVQL-----------------NLALLANQ-----SAHHLKAFGIGDVWVAVG 104
PRE+IG I +L L L NQ S ++L+ GD W+AVG
Sbjct: 203 PREIIGLILKKLGYSYNTNNIQEIEDVYRELTTLNNQVKFYDSTNYLQPLINGDTWLAVG 262
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+D+LP ++ N+ AV+P+SG SLWAD+W P + L +++G I++WI
Sbjct: 263 WSTDILPVLEQHRNIRAVIPESGTSLWADIWVQPYENNLSEEKLGE--------IYRWIN 314
Query: 164 FCLQ--TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
+C Q +A + F G SP L E + + EI A+
Sbjct: 315 YCWQEDSATRINF---FTKGNSPI--------LSAENANNRLQMS---------EEIFAK 354
Query: 222 FEFLEPLSEATLSDMS 237
EF+EPL E ++ +
Sbjct: 355 SEFIEPLPETIMAQYN 370
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 124/251 (49%), Gaps = 35/251 (13%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G++D GK+ APYRWG VIAY++ KF+ P DW DLWR L RIS++
Sbjct: 144 VKRDQTGQLDNSGKVWGAPYRWGATVIAYRRDKFKALGWTPT-DWSDLWRESLRDRISVL 202
Query: 65 NSPREVIGSIAVQLNLAL-----------------LANQ-----SAHHLKAFGIGDVWVA 102
N PREVIG L L+ LA Q S H+LK +GD WVA
Sbjct: 203 NHPREVIGLTLKNLGLSYNQQDLNQVKDLKPALRQLAKQVKFYSSDHYLKPLVLGDTWVA 262
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+L + AVVP+SG +LW+D+W P + + +W
Sbjct: 263 VGWSTDILALRTRDRQIEAVVPQSGTALWSDVWVKPVSVSSASDSSESNSESDL--SKKW 320
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
IEFC + A + ASP L+ KLP ++ L +P AEIL +
Sbjct: 321 IEFCWDSKSAKQISL-LTNAASPILLKIPRNKLPQDI--------QTLPLLLPEAEILNK 371
Query: 222 FEFLEPLSEAT 232
EFL PL E+T
Sbjct: 372 CEFLHPLPEST 382
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 125/248 (50%), Gaps = 42/248 (16%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN G++DP G+I A PYR GT VIAY++ F + NL P DW DLWR +L RI+++N+
Sbjct: 165 RNQQGQLDPDGQIWALPYRIGTTVIAYRRDIFEQRNLQPPTDWSDLWRKDLRRRIALLNN 224
Query: 67 PREVIGSI-----------------AVQLNLALLANQ-----SAHHLKAFGIGDVWVAVG 104
PREVIG +Q L LL Q S +L+ + DVW+AVG
Sbjct: 225 PREVIGLTLKKLGKSYNTEDLASVPTLQQELNLLQEQVKYYSSTSYLQPLLLDDVWLAVG 284
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+DVLP ++ + A+ P+SG +L ADLW PA + L QWIE
Sbjct: 285 WSTDVLPLMQRSRQIAAIAPRSGTALSADLWVHPAMTS----------TALPAAALQWIE 334
Query: 164 FCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
FC QT A SPS + + +L + + P+L +P +IL E
Sbjct: 335 FCWQTKIATQLSLATW-AVSPSLIGTPDTQLLAQ-FRDYPAL-------LPNIDILQASE 385
Query: 224 FLEPLSEA 231
FL PLSE
Sbjct: 386 FLLPLSET 393
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 130/255 (50%), Gaps = 47/255 (18%)
Query: 5 LRRNDAGEIDP--RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 62
+RRN GE+ G I APYRWGT IAY+ KF K P DW+DLWR E GRIS
Sbjct: 140 VRRNQNGELSDSLEGNIWGAPYRWGTTAIAYRVDKFEKLGWTPT-DWEDLWRSECKGRIS 198
Query: 63 MVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVW 100
++N REVIG +L +L L+ + S ++LK +GD W
Sbjct: 199 LLNQGREVIGLTLKKLGYSYNTPDLDLVPDLKAQLEQLHQNVRLYDSDNYLKPLILGDTW 258
Query: 101 VAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
+AVGWS D+ P ++ N+A+ +PKSG +LW+D+W P A+ +PL+
Sbjct: 259 LAVGWSGDISPQLQRQHNIAIAIPKSGTALWSDVWVKPKATSATN----------NPLVQ 308
Query: 160 QWIEFCLQTARALPFKQEVIPGA-SPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
WI+FC Q A + ++ GA SP LP + L+ P L +P +I
Sbjct: 309 AWIDFCWQPEIAT--QMSLLTGATSPIVWGMPRADLPKD-LRENPQL-------LPDTDI 358
Query: 219 LARFEFLEPLSEATL 233
L R EFL PL+ A++
Sbjct: 359 LDRSEFLLPLTVASM 373
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 127/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+++ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQLETEGKVWGAPYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVRFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P P + N + P E + +
Sbjct: 307 IDFCWQPESANKISL-FTSGLSPLILTENPDQIP-------PDIRNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 132/266 (49%), Gaps = 53/266 (19%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIE-----DWKDLWRPELAG 59
+DPR GKI AAPYRWG VIAY+K K ++ N +E DW DLWRPELAG
Sbjct: 133 LDPRFQKLVTKDGKIYAAPYRWGNTVIAYRKDKLQEFNKDRVEKLEITDWADLWRPELAG 192
Query: 60 RISMVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIG 97
+IS++++ RE+IG +L NL + N S +L+ +G
Sbjct: 193 QISLLDNYREIIGLTLKKLGHSYNSSNLTAITNLESELATLHQQVKFYSSTKYLQPLALG 252
Query: 98 DVWVAVGWSSDVLPAVKHMSNV--AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLS 155
D+W AVGWS+D+LP V+ + VVP SG SLWADLW P IG RV
Sbjct: 253 DLWAAVGWSTDILPLVRRYPDKIGMVVPASGTSLWADLWVQPTVD----GSIGDRVER-- 306
Query: 156 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPP 215
+ WI+FC Q + A G SP + V+L EL + + ++L
Sbjct: 307 -RLASWIDFCWQDSSASTL-MLFTNGISPILNQENQVELTKELKNNQDFIQSSL------ 358
Query: 216 AEILARFEFLEPL-SEATLSDMSGWE 240
++ + +F+EPL +E T + WE
Sbjct: 359 -KLFSNSDFIEPLTTEVTQEYQALWE 383
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 128/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ AAPYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWAAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVRFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVGDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P + +K P L V P E + +
Sbjct: 307 IDFCWQPESANKISL-FTSGLSPLVLTENPDQIPSD-IKNNPLL-------VNP-EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 45/253 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRND G++DP+GK+ AAPYRWG+ VIAY+ KF+ P DWKDLWR EL RIS+
Sbjct: 124 VRRNDEGKLDPQGKVWAAPYRWGSTVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLP 182
Query: 65 NSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVA 102
+S REVIG +L + Q S +L+ +GD W+A
Sbjct: 183 DSAREVIGLTLKKLGKSYNTQQLDQVPNVKKELENLHQQVKLYSSDAYLQPLILGDTWLA 242
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VG S D+LP ++ ++A V+P SG +LW DLW PA+ G V L+ +W
Sbjct: 243 VGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVEPAS--------GNPVS----LVEEW 290
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FCLQ R P + +SP + LP ++ TN + +P A+ILA
Sbjct: 291 IDFCLQ-PRVAPQLSLLAKASSPIIIGMKPEDLPE-------AVRTNSVL-LPDAKILAA 341
Query: 222 FEFLEPLSEATLS 234
+FL P +A ++
Sbjct: 342 SDFLLPFGDAGIA 354
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 127/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+++ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQLETEGKVWGAPYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNYSDLKQVTGLKDQLFALQKQVRFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVEQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L ++P P + N + P E + +
Sbjct: 307 IDFCWQPESANKISL-FTSGLSPLILTENPDQIP-------PDIRNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 128/249 (51%), Gaps = 49/249 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+D G ++P+GK+ APYRWG+ VI Y + KF K + P DW DLWR EL RIS++
Sbjct: 143 VQRDDLGNLNPQGKVWGAPYRWGSTVIVYNREKFEKLDWRP-RDWNDLWRDELQQRISLL 201
Query: 65 NSPREVIGSI-----------------AVQLNLALLANQ-----SAHHLKAFGIGDVWVA 102
N PREVIG + +Q L L Q S ++L+ IGD W+A
Sbjct: 202 NQPREVIGLVLKKLGKSYNTENLDQIPELQTELQKLNQQVKFYSSNNYLEPLIIGDTWLA 261
Query: 103 VGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD++P + + VV P+SG ++WADLW P G + L +QW
Sbjct: 262 VGWSSDIVPLLGRYPQLTVVIPQSGTAIWADLWVRPTGV------------GKASLPYQW 309
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLP-GELLKGKPSLDTNLIAGVPPAEILA 220
I+FC Q A KQ + S S + + +V E L+ NL+ P +I
Sbjct: 310 IDFCWQPNIA---KQISLLTKSNSPISTNIVASDIQEPLQ-------NLLLTNP--QIFQ 357
Query: 221 RFEFLEPLS 229
+ EFL PLS
Sbjct: 358 KSEFLLPLS 366
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 125/251 (49%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S H+L+ +GDVWV+
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVMGLKDQLFALQKQVKFYSSQHYLQPLILGDVWVS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSNRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L P ++ P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLILTEN----PDQI---SPDIRNNPLLVNP--EAVKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 129/251 (51%), Gaps = 44/251 (17%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN G +DP+G++ AAPYRWGT IAY++ +F P +DW DLWR ++ +IS++N+
Sbjct: 110 RNSQGMLDPQGQVWAAPYRWGTTAIAYRREQFETLGWTP-QDWGDLWREDIRNQISVLNN 168
Query: 67 PREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVAVG 104
PRE IG I +L +L L+ + S +LK GD W+AVG
Sbjct: 169 PRETIGLILKKLGSSYNITDLDLVVDLEDEFRQLHRNIKLYDSNTYLKPLITGDTWLAVG 228
Query: 105 WSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+D N+ VV P SG +LWAD+W P + + + L PL QWI+
Sbjct: 229 WSTDFSEKFCRQHNIGVVIPTSGTALWADVWVQPTSEK--------PISNL-PLAQQWID 279
Query: 164 FCLQTARALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
FC + A + ++ G SP + +LP E L+ P L P AEIL +
Sbjct: 280 FCWKPEIAT--QMSILTGTTSPIVNQLQPSELP-ETLQNNPLL-------FPKAEILEQS 329
Query: 223 EFLEPLSEATL 233
EFL PL E+TL
Sbjct: 330 EFLLPLPESTL 340
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 134/253 (52%), Gaps = 45/253 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRND G++DP+GK+ AAPYRWG+ VIAY+ KF+ P DWKDLWR EL RIS+
Sbjct: 124 VRRNDEGKLDPQGKVWAAPYRWGSTVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLP 182
Query: 65 NSPREVIGSIAVQL-----------------NLALLANQ-----SAHHLKAFGIGDVWVA 102
+S REVIG +L LA L Q S +L+ +GD W+A
Sbjct: 183 DSAREVIGLTLKKLGKSYNTQQLDRVPNLKKELANLHRQVKFYSSDAYLQPLILGDTWLA 242
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VG S D+LP ++ ++A V+P SG +LW DLW PA+ G V L+ +W
Sbjct: 243 VGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVEPAS--------GNPVS----LVDKW 290
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FCLQ R P + +SP + LP ++ TN + +P A+ILA
Sbjct: 291 IDFCLQ-PRIAPQLSLLAKASSPIIVGMKPEDLPE-------AVRTNSVL-LPDAKILAA 341
Query: 222 FEFLEPLSEATLS 234
+FL P +A ++
Sbjct: 342 SDFLLPFGDAGIA 354
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 106/189 (56%), Gaps = 36/189 (19%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R + RN+ G DP+GK+ AAPYRWG+ VI Y + KF+K P +DW DLWR EL RI
Sbjct: 146 RELVTRNEQGIPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWTP-QDWSDLWRNELRSRI 204
Query: 62 SMVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDV 99
S+++ PREVIG + +L NLA + + S +L+ IGD
Sbjct: 205 SLLDQPREVIGLVLKKLGKSYNIENLATVPDLEKELQTLNQQVKFYSSNTYLEPLIIGDT 264
Query: 100 WVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
W+AVGWSSDV+P + ++ V+P+SG S+WADLW P K+I L
Sbjct: 265 WLAVGWSSDVIPVLARYPQLSLVIPRSGTSIWADLWVSP-------KEITQ-----DALS 312
Query: 159 HQWIEFCLQ 167
QWI+FCLQ
Sbjct: 313 SQWIDFCLQ 321
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 131/258 (50%), Gaps = 54/258 (20%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R + RN+ G DP+GK+ AAPYRWG+ VI Y + KF+K P +DW DLWR EL RI
Sbjct: 146 RELVTRNEQGVPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWIP-QDWSDLWRSELRSRI 204
Query: 62 SMVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDV 99
S+++ PRE+IG + +L NLA + + S +L+ +GD
Sbjct: 205 SVLDQPREIIGLVLKKLGKSYNTENLATVPDLEKELQTFNQQVKIYSSNTYLEPLILGDT 264
Query: 100 WVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
W+AVGWSSD++P + ++VV P+SG S+WADLW P ET + G L
Sbjct: 265 WLAVGWSSDLIPVLARYPQLSVVIPRSGTSIWADLWVSPK----ETAKDG--------LS 312
Query: 159 HQWIEFCLQ--TARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPP 215
QWI+FCLQ AR + + P A+ L G L +
Sbjct: 313 SQWIDFCLQPNIARQIALLTKTNSPVATNIGTADIQESLGGLFLNSQ------------- 359
Query: 216 AEILARFEFLEPLS-EAT 232
E+ A+ EFL PLS EAT
Sbjct: 360 -EVFAKGEFLLPLSPEAT 376
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 125/261 (47%), Gaps = 43/261 (16%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G +D RGK+ PYRWG+ VIAY++ +FR+ P DW DLWR EL RIS++
Sbjct: 125 VQRDRNGNLDARGKVWGIPYRWGSTVIAYREDRFRQAGYDPPTDWGDLWREELRDRISLL 184
Query: 65 NSPREVIGSIAVQLNLAL----------------LANQ------SAHHLKAFGIGDVWVA 102
N PREVIG +L + NQ S +L+ + D WVA
Sbjct: 185 NQPREVIGLTLKKLGFSYNTPDLDSISDLKTALKTLNQQVKFYSSQSYLQPLILEDTWVA 244
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+L ++ ++P+SG +LWADLW P + +S I QW
Sbjct: 245 VGWSNDLLQLRTRYPDIKTIIPRSGTALWADLWVNPTGN-----------EAISEAILQW 293
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FCL A +SP + + K+P L + K P +E+L +
Sbjct: 294 IDFCLNPKAANQIGI-FTNASSPIFINANRDKIPKSLGEDK--------IKNPSSEVLEK 344
Query: 222 FEFLEPLSEATLSDMSGWEIG 242
EFL PLS T G+ G
Sbjct: 345 SEFLLPLSPKTEEQYQGFWKG 365
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 130/262 (49%), Gaps = 45/262 (17%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN G + G++ APYRWGT VI Y++ KF + P +DW DLWRPEL RIS+++
Sbjct: 169 RNQQGLLAKNGQVWGAPYRWGTTVIVYRRDKFEELGWTP-KDWSDLWRPELRDRISLLDQ 227
Query: 67 PREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVAVG 104
PREVIG +L NL+ + N S +L+ +GD W+A+G
Sbjct: 228 PREVIGLTLKKLGFSYNHKNLSQVPNLKEELLKLHQQVKYYSSNQYLEPLLLGDTWLALG 287
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPA--ASRLETKQIGGRVRGLS------ 155
WS+DVL + ++VP SG +LWAD+W PA A+R T +
Sbjct: 288 WSTDVLSVQSGYRQIDSIVPLSGTALWADVWVQPAPIAARSNTVKTSASSTPQQDSSVNM 347
Query: 156 PLIHQWIEFCLQTARALPFKQEVI--PGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
PL QWIEFC + LP +Q + ASP + KLP L + + V
Sbjct: 348 PLTKQWIEFCW---KPLPAQQISVLSHAASPMFADVEPTKLPKTLRENR--------LLV 396
Query: 214 PPAEILARFEFLEPLSEATLSD 235
P +++L + EFLEPL + D
Sbjct: 397 PDSKVLKKCEFLEPLPQEISQD 418
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 128/247 (51%), Gaps = 41/247 (16%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRN+ G D RG+I APYRWG+ +IAY++ +F K P DW DLWR EL RIS++
Sbjct: 141 VRRNEQGMPDERGQIWGAPYRWGSTLIAYRQEEFEKLGWLPT-DWGDLWREELRDRISLL 199
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
+ PREVIG +L +L + N S +L+ +GD W+A
Sbjct: 200 DQPREVIGLTLKKLKHSYNSQDLNKIPNLKSELLSLHRQVKFYSSDRYLQPLILGDTWLA 259
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD+L + + AV+P+SG SLWAD+W PA+ + + + + L+ QW
Sbjct: 260 VGWSSDILALTERYRTIKAVIPRSGTSLWADIWVQPASVQETSDR--------TSLLKQW 311
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC QT A ASP L +L ++ K N + + P +IL +
Sbjct: 312 IDFCWQTQSANQISL-FTNAASPIVLNLKADELSKDIRK-------NPLLLIEP-QILDK 362
Query: 222 FEFLEPL 228
EFL PL
Sbjct: 363 CEFLYPL 369
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 131/250 (52%), Gaps = 44/250 (17%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+D G D +GK+ APYRWG V+ Y + + + N PI DW DLWR +L RIS+
Sbjct: 28 VKRDDQGNWDSQGKVWGAPYRWGNTVLVYNQKQLQNFNWQPI-DWSDLWRSDLRSRISLP 86
Query: 65 NSPREVIGSIAVQ----------------------LNLALLANQSAHHLKAFGIGDVWVA 102
N PREVIG + + LN + +S ++L+ GD W+A
Sbjct: 87 NHPREVIGLVLKKLGRSYNTVNPVEIPNLKIELESLNQQVKFYESTNYLEPLITGDTWLA 146
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRL-ETKQIGGRVRGLSPLIHQ 160
VGWS+D++P + + AV+P+SG ++WAD+W PA + + ET + LI Q
Sbjct: 147 VGWSNDIIPILSRYPQLRAVIPQSGTAIWADIWVQPANTLITETDKTDN-------LILQ 199
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDT-NLIAGVPPAEIL 219
WI+FC Q A +Q V+ G + + K+ G S DT NL+ V E+L
Sbjct: 200 WIDFCWQPDIA---RQIVMLGKTNTPTFVNTSKVQG------ISDDTQNLL--VIEHELL 248
Query: 220 ARFEFLEPLS 229
+ EFL+PLS
Sbjct: 249 EKCEFLKPLS 258
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 125/251 (49%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIG-----------------SIAVQLNLALLANQ-----SAHHLKAFGIGDVWVA 102
++ REVIG + ++ L L Q S H+L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKMGYSYNSSDLKQVMGLKDQLFALQKQVKFYSSQHYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVEQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L P ++ P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLILTQN----PDQI---SPDIRNNPLLVNP--EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 99/186 (53%), Gaps = 36/186 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RR+D G IDP+GKI AAPY WG VI Y KF+K + P +DW DLWR EL RIS++
Sbjct: 142 VRRDDQGNIDPQGKIWAAPYHWGNTVIIYNGEKFQKFDWQP-KDWSDLWRSELRSRISLL 200
Query: 65 NSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVA 102
N PREVIG + +L N+ + + S +L+ GD W+A
Sbjct: 201 NHPREVIGLVLKKLGESYNTENITQIPDLKAELLALHQQVKFYDSTTYLEPLLTGDTWLA 260
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+DV+P + + AV+P+SG ++WADLW PA T L W
Sbjct: 261 VGWSNDVMPILSRYPKLTAVIPQSGTAMWADLWVSPAEVEQNT------------LASDW 308
Query: 162 IEFCLQ 167
I FC Q
Sbjct: 309 INFCWQ 314
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 136/256 (53%), Gaps = 48/256 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++RN G +DP+G+I APYRWGT +IAY+ + ++ + P +DW DLW+ L RIS+
Sbjct: 118 VKRNSQGYVDPQGEIWGAPYRWGTTMIAYRSDRLKEVGIVP-QDWSDLWQSALKERISLP 176
Query: 65 NSPREVIGSIAVQL-------NLALLA---------NQ------SAHHLKAFGIGDVWVA 102
REVIG +L NLA + NQ S +L+ GD W+A
Sbjct: 177 AHSREVIGLTLKKLGYSYNQTNLAAIPELPKELERLNQQVKFYSSDAYLQPLIKGDTWLA 236
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D++P + SN+ AV+P SG SLW DLW A ++ ++ LI W
Sbjct: 237 VGWSTDIIPVANNYSNIEAVIPPSGTSLWVDLWVKSALTQPTAPEVE--------LIKGW 288
Query: 162 IEFCLQ--TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
I+FC Q +A A+ + ASP L + + GEL K KP + +P EIL
Sbjct: 289 IDFCWQPRSAEAISL---LTNAASPVILNA---PVSGELTK-KPLV-------IPSPEIL 334
Query: 220 ARFEFLEPLSEATLSD 235
++ EFL PL+ TL++
Sbjct: 335 SKSEFLLPLNMETLAE 350
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 124/251 (49%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIG-----------------SIAVQLNLALLANQ-----SAHHLKAFGIGDVWVA 102
++ REVIG A++ L L Q S ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNYSDLKQVTALKDQLFALQKQVKFYSSQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYKKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVEQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L P ++ P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLILTQN----PDQI---SPDIRNNPLLVNP--EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 35/189 (18%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
+LRRN GEIDP+G++ PYRWGT ++ Y+K K + P DW DLWRPEL G+IS+
Sbjct: 135 FLRRNVQGEIDPQGQLWGQPYRWGTTMLVYRKDKLKNLGWTPT-DWADLWRPELQGKISL 193
Query: 64 VNSPREVIG----------------SIA-VQLNLALLANQ-----SAHHLKAFGIGDVWV 101
+N REV+G +IA ++ + L Q S H+L+ +GD W+
Sbjct: 194 LNQSREVLGLLLKKQGKSYNETDPEAIANLESDFQTLHRQVKFYSSTHYLQPLNMGDTWI 253
Query: 102 AVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
A GWS D+LP ++ N+ AV+P SG +LW DLW P S+ + +
Sbjct: 254 AQGWSQDILPLLQRYRNLGAVIPASGTALWCDLWVQPQRSQTSFE-----------TLKT 302
Query: 161 WIEFCLQTA 169
W++FC + A
Sbjct: 303 WLDFCWEPA 311
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 131/253 (51%), Gaps = 48/253 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRN GE+D G+I AAPYRWG VIAY + KF P +W DLWR EL RIS+
Sbjct: 143 VRRNAQGEVDINGQIWAAPYRWGNTVIAYNRKKFESLGWTPT-NWSDLWREELRSRISLP 201
Query: 65 NSPREVIGSIAVQL----------NLALLANQ------------SAHHLKAFGIGDVWVA 102
N PREVIG +L ++ LA+Q S +++ +GD W+A
Sbjct: 202 NQPREVIGLTLKKLGYSYNSQNLQQVSQLADQLKTLHQQVKFYSSDRYMEPLILGDTWLA 261
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSDV+P ++ + A+VP+SG+++WAD+W P S + L QW
Sbjct: 262 VGWSSDVIPVIQRYQEIAAIVPQSGSAIWADVWVSPTKSPVNKL-----------LAKQW 310
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKL-PGELLKGKPSLDTNLIAGVPPAEILA 220
I+FC LP Q+ I S AL + + P ++ +G NL+ + +E A
Sbjct: 311 IDFCW-----LPQSQKQISILS-KALSPIEIDINPTDVQEGL----RNLL--LVKSETFA 358
Query: 221 RFEFLEPLSEATL 233
+ EFL PL + T+
Sbjct: 359 QSEFLLPLPKETM 371
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 128/251 (50%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RRND G DP+GK+ AAPYRWG+ VI Y + KF+ P +DW DLWR E+ R S++
Sbjct: 142 VRRNDQGFPDPQGKVWAAPYRWGSTVIVYNQDKFKDLGWMP-QDWSDLWREEMRSRFSLL 200
Query: 65 NSPREVIGSIAVQL-------NLALLA---------NQSAH------HLKAFGIGDVWVA 102
+ PREVIG + +L NL + NQ A +L+ IGD W+A
Sbjct: 201 DHPREVIGLVLKKLGKSYNTENLDAVPQLEQELRTLNQQAKFYSSNTYLQPLIIGDTWLA 260
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+DV+P + + ++P+SG ++WADLW P + + L QW
Sbjct: 261 VGWSNDVVPILSRYPQMKMIIPRSGTAIWADLWVSPKGANQDDN-----------LSSQW 309
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A KQ V+ S S + + + + ++G S + L+ E+ +
Sbjct: 310 IDFCWQPNIA---KQIVVRTKSNSPIPTNIA---DDDIQG--SFASLLLNN---QEVFDK 358
Query: 222 FEFLEPLSEAT 232
EFL PL T
Sbjct: 359 SEFLLPLQLTT 369
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 125/249 (50%), Gaps = 48/249 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RR++ G + +GKI APYRWGT +IAY+K +K P +DW DLWR ++ RIS++
Sbjct: 137 VRRDEQGMVSQQGKIWGAPYRWGTTMIAYRKDNLKKLGWEP-KDWGDLWREDVRNRISLL 195
Query: 65 NSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
+ PREVIG S V LN S H+L+ +GD W+A
Sbjct: 196 DQPREVIGLTLKKLGYSYNSDNINQIPNLKSDLVALNKQAKFYSSDHYLEPLILGDTWLA 255
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS +++P +K+ ++ AVVP+SG +LWAD+W PAA V S + W
Sbjct: 256 VGWSHEIIPLLKNYRDIAAVVPQSGTALWADIWVKPAA-----------VIKPSKFVQDW 304
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSL--DTNLIAGVPPAEIL 219
I FC Q+ A SP LE LP + ++ P L D N IL
Sbjct: 305 INFCWQSKSAKEISL-FTDAVSPVILELAPENLP-QAIRDNPLLLIDKN---------IL 353
Query: 220 ARFEFLEPL 228
+ +F++PL
Sbjct: 354 EKSDFIKPL 362
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 124/251 (49%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MARNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQS-------AHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q ++L+ +GDVW++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVTALKDQLFALQKQVKFYSYQYYLQPLILGDVWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + + VVPKSG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTTPNS------------LVEQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP L P ++ P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLILTQN----PDQI---SPDIRNNPLLVNP--EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 121/260 (46%), Gaps = 67/260 (25%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R + RN+ G +D +GK+ AAPYRWG+ VI Y++ KF++ P DW DLWR EL RI
Sbjct: 140 RELVTRNEQGFLDTQGKVWAAPYRWGSTVIVYRRDKFQQLGWTPT-DWSDLWRTELRDRI 198
Query: 62 SMVNSPREVIGSIAVQ----------------------LNLALLANQSAHHLKAFGIGDV 99
S++N PREVIG + + LN + S +L+ IGD
Sbjct: 199 SLLNHPREVIGLVLKKLGKSYNTENLDAIPGLEAELRALNQQVKFYDSTRYLEPLIIGDT 258
Query: 100 WVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
W+AVGWS DVLP V +AVV P SG +LWAD+W P + L
Sbjct: 259 WLAVGWSDDVLPVVTRYPQLAVVTPLSGTALWADVWVKPMGI------------NQANLA 306
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG------ 212
++WI+FC Q P+ E + L K + TN+ A
Sbjct: 307 YKWIDFCWQ----------------PNIAEQIFI-----LTKTNSPIPTNIRASNIQEQI 345
Query: 213 ----VPPAEILARFEFLEPL 228
+ EIL + EFL+PL
Sbjct: 346 RNFLLNNDEILGKSEFLQPL 365
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 137/255 (53%), Gaps = 46/255 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+D G D +G++ APYRWG V+ Y + + +K N P DW DLWR +L RIS+
Sbjct: 149 VKRDDQGNWDSQGEVWGAPYRWGNTVLVYNQKQLQKFNWQP-RDWGDLWRSDLRSRISLP 207
Query: 65 NSPREVIGSIAVQ---------------LNLALLA-NQ------SAHHLKAFGIGDVWVA 102
N PREVIG + + LN+ L + NQ S ++L+ GD W+A
Sbjct: 208 NHPREVIGLVLKKLGRSYNTVNPVKISNLNIELESLNQQVKFYDSTNYLEPLITGDTWLA 267
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D++P + + AV+P+SG ++WADLW PA + L T++ LI QW
Sbjct: 268 VGWSNDIIPILSRYPQLRAVIPQSGTAIWADLWVQPANT-LMTEETDN-------LISQW 319
Query: 162 IEFCLQTARALPFKQEVIPGA--SPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
I+FC Q A Q V+ G +P+ + ++ V +G NL+A E+L
Sbjct: 320 IDFCWQPDIA---GQIVMLGKTNTPTFINTSKV-------QGISDSIQNLLA--IEQELL 367
Query: 220 ARFEFLEPLSEATLS 234
+ EFL+PLS +++
Sbjct: 368 EKCEFLKPLSLESIN 382
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 36/188 (19%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
R+D G +D +GK+ APYRWGT VI Y + KFR+ P +DW DLWR + RIS++N
Sbjct: 148 RDDQGNLDTQGKVWGAPYRWGTTVIVYNRDKFRELGWTP-KDWSDLWRDGMQQRISLLNQ 206
Query: 67 PREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDVWVAVG 104
PREVIG + +L NL + N S ++L+ +GD W+AVG
Sbjct: 207 PREVIGLVLKKLGKSYNTENLDQVPNLEKELQTLNQQVKFYSSNNYLEPLIMGDTWLAVG 266
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WSSDVL + + AV+P+SG ++WADLW PA T L QWI+
Sbjct: 267 WSSDVLQVLGRYPQLGAVIPQSGTAMWADLWVRPAGINKGT------------LSDQWID 314
Query: 164 FCLQTARA 171
FC Q + A
Sbjct: 315 FCWQPSIA 322
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 122/251 (48%), Gaps = 46/251 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+ RN G+ GK+ APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 65 NSPREVIGSIAVQLNLA---------------LLANQ-------SAHHLKAFGIGDVWVA 102
++ REVIG +L + L A Q S ++L+ +GD+W++
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVTGLKDELFALQKQVKFYSSQYYLQPLILGDIWLS 258
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP + VVP SG SLW+D+W P + + L+ QW
Sbjct: 259 VGWSNDILPVSDRYKKIKVVVPNSGTSLWSDVWVKPVLTTPNS------------LVQQW 306
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I+FC Q A G SP ++P P + N + P E + +
Sbjct: 307 IDFCWQPESATKISL-FTSGLSPLIPTENPDQIP-------PDIKNNPLLVNP--EAIKK 356
Query: 222 FEFLEPLSEAT 232
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 114/220 (51%), Gaps = 40/220 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G++ G+I APYRWG +I Y++ KF+ + P +DW+DLW +L RIS+V
Sbjct: 140 VKRDRNGQLAENGQIWGAPYRWGNTIIVYRRDKFKDLDWQP-KDWQDLWHQDLRDRISIV 198
Query: 65 NSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVA 102
+ PREVIG +L + N S H+L+ IGD W+A
Sbjct: 199 DQPREVIGLTLKKLGYSYNTNDLNKIPNLSSELAALHQQIKFYSSDHYLEPLIIGDTWLA 258
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS+D+LP K SN+ VVP+SG S+WADLW P RL G + QW
Sbjct: 259 VGWSTDILPLSKRYSNLGFVVPQSGTSIWADLWVQP---RLAESNFGE--------LSQW 307
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTL--VKLPGELL 199
I FC R L Q + + S + +T+ +LP +LL
Sbjct: 308 INFCW---RPLAANQISLFTNAISPVTNTMKPTELPQDLL 344
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 129/257 (50%), Gaps = 59/257 (22%)
Query: 6 RRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVN 65
+RND G D GKI A PYRWG +I Y++ F P DW DLWRPEL RI++V+
Sbjct: 147 QRNDQGLPDQSGKIWAVPYRWGPTMIIYRQQPFADLGWQPT-DWSDLWRPELKQRIALVD 205
Query: 66 SPREVIGSIAVQLNLAL-----------------LANQ-----SAHHLKAFGIGDVWVAV 103
PRE IG +L + LA Q S ++L+A DVW+AV
Sbjct: 206 DPREAIGLTLKKLGYSYNVTNPKAVNALPSALQELATQVKFYNSKYYLQALLNKDVWLAV 265
Query: 104 GWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWI 162
GWS+ ++P +++ S + AV+P SG SLWADLW +PA +E +I ++W+
Sbjct: 266 GWSNQIIPLLRNQSELRAVIPSSGTSLWADLWTMPA--EMEAAEI----------TYEWL 313
Query: 163 EFCLQTARALPFKQEVIPGASPSALE-----STLVKLPGELLKGKPSLDTNLIAGVPPAE 217
F A PS+LE S + +P + L+ +L TN + P E
Sbjct: 314 NFS----------------AQPSSLEQMATFSNALAVPYQNLEVS-ALSTNPLLAFSP-E 355
Query: 218 ILARFEFLEPLSEATLS 234
+L R EFL PL AT++
Sbjct: 356 LLERCEFLAPLDIATVN 372
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 125/245 (51%), Gaps = 47/245 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
D GKI PYRWG VI Y + KF++ P DW DLWR EL RIS++N PREVIG
Sbjct: 145 DQEGKIWGVPYRWGNTVIIYNQEKFQELGWKPT-DWSDLWRSELQNRISLLNHPREVIGL 203
Query: 74 I-----------------AVQLNLALLANQ-----SAHHLKAFGIGDVWVAVGWSSDVLP 111
+ A++ L L Q S ++L+ GD W+AVGWS D++P
Sbjct: 204 VLKKLGKSYNTENIKQISALKPELQALNQQVKFYDSQNYLEPLITGDTWLAVGWSHDIIP 263
Query: 112 AV-KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
+ ++ AVVP+SG ++W DLW P G GL+ +QW++FCLQ
Sbjct: 264 VISRYQKFAAVVPQSGTAIWTDLWVSPT---------GVSNDGLA---YQWLDFCLQPNT 311
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ KQ + S S +++ +V G++ K L L+ AEILA+ EF+ PL
Sbjct: 312 S---KQIALLTKSNSPVDNAMVL--GDIQK---QLQNLLLTD---AEILAKSEFILPLPP 360
Query: 231 ATLSD 235
A + +
Sbjct: 361 AVMKE 365
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 119/258 (46%), Gaps = 67/258 (25%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
R+ G ++P+G++ APYRWG VI Y + KF+K + P +DW DLWR EL IS++N
Sbjct: 144 RDKQGNVNPQGQVWGAPYRWGNTVIVYNREKFQKLDWQP-KDWSDLWRSELRSHISLLNH 202
Query: 67 PREVIGSIAVQ----------------------LNLALLANQSAHHLKAFGIGDVWVAVG 104
PRE+IG + + LN + S +L+ GD W+AVG
Sbjct: 203 PREIIGLVLKKLGQSYNTENLDQIPSLEAELKALNQQVKFYDSTTYLEPLITGDTWLAVG 262
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+DV+P + + AV+P+SG ++WADLW PA G R L+ QWI+
Sbjct: 263 WSNDVIPLLSRYPKLTAVIPQSGTAIWADLWVSPA---------GVDKRALA---SQWID 310
Query: 164 FCLQ----------TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
FC Q T P + ++ LE+ L+ P
Sbjct: 311 FCWQPNIAKKIAVLTKTNSPIAKNIVAADIQKQLENLLLTNP------------------ 352
Query: 214 PPAEILARFEFLEPLSEA 231
E+ + EFL PLS A
Sbjct: 353 ---EVFDKSEFLLPLSPA 367
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 36/189 (19%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R + RND G +DP+GK+ AAPYRWG+ VI Y + KFR+ P +DW DLWR L I
Sbjct: 143 RQLVTRNDQGILDPQGKVWAAPYRWGSTVIVYDRHKFRELGWQP-QDWSDLWRDGLRSHI 201
Query: 62 SMVNSPREVIGSIAVQL-------NLALLAN---------------QSAHHLKAFGIGDV 99
S++++PREVIG + + NL + N S +L+ GD
Sbjct: 202 SLLDNPREVIGLVLKKFGKSYNTENLDTVPNLEKELQTLNQQVKFYSSNTYLEPLVTGDT 261
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
W+AVGWSSDVLP + + AV+P+SG ++WADLW P + + +
Sbjct: 262 WLAVGWSSDVLPLLSRYPQLNAVIPQSGTAIWADLWVRPTKA------------SKNDIS 309
Query: 159 HQWIEFCLQ 167
+WI+FC Q
Sbjct: 310 SKWIDFCWQ 318
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 129/253 (50%), Gaps = 48/253 (18%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++R+ G + G I APYRWGT +IAY+ K + P +DW DLW L+ RISMV
Sbjct: 144 VKRDRQGNLQENGLIWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDERLSDRISMV 199
Query: 65 NSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
N PRE+IG S + LN + H+L+ +GDVWV+
Sbjct: 200 NQPREIIGLTLKQLGKSYNTENLEEVPELKSELLNLNKRVKYYSDQHYLQPLVVGDVWVS 259
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWS++++P + N+ AVVP SG ++W+D+W P A ET+ LS + QW
Sbjct: 260 VGWSNEIIPLMAKSPNIKAVVPTSGTAIWSDIWVKPKAKETETE--------LSEIAKQW 311
Query: 162 IEFCL--QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
+ FC Q AR + + ASP +T+ K EL +P + N + + A I
Sbjct: 312 LNFCWQPQAARLMSLFAD---AASPVI--NTIDK--DEL---EPDITNNPLLFIDSA-IF 360
Query: 220 ARFEFLEPLSEAT 232
+ +FLEPLS+ +
Sbjct: 361 DKCDFLEPLSKQS 373
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 117/214 (54%), Gaps = 37/214 (17%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLA--PIEDWKDLWRPELAG 59
R ++R G +DP+G + A P+RWG +IAY+KS + PI DW DL +P L
Sbjct: 102 RELVKRGADGSVDPKGLVWACPHRWGCTLIAYRKSARARSAAGAHPIRDWGDLLQPCLRQ 161
Query: 60 RISMVNSPREVIGSI-----------AVQLNLALLANQ-----------------SAHHL 91
R++ V+SPRE +G+ A +L L++Q S H+
Sbjct: 162 RVAWVDSPREFVGAALKTLGGGFNTGAAELASLGLSDQDLAQQVDRLRQQVRVFSSKEHI 221
Query: 92 KAFGIGDVWVAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGR 150
KA G DVW VGWS D++PA + +V +V P SG SLWAD+WA+P+ + Q G R
Sbjct: 222 KALGAKDVWAVVGWSGDLVPAAERSGDVVLVAPASGTSLWADMWAVPSHA-----QHGSR 276
Query: 151 VRGLSPLIHQWIEFCLQTARALPFKQEVIPGASP 184
+RG SPL+ W+++ LQ +RA + + + GASP
Sbjct: 277 MRGPSPLLPAWLDYWLQPSRAA-WNRGLKSGASP 309
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 118/252 (46%), Gaps = 59/252 (23%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RND G +D +GK+ AAPYRWG+ VI Y + KF++ P DW DLWR E+ RIS++N
Sbjct: 139 RNDQGILDAQGKVWAAPYRWGSTVIVYNRDKFKELGWTP-SDWGDLWREEVRSRISLLNQ 197
Query: 67 PREVIGSIAVQ----------------------LNLALLANQSAHHLKAFGIGDVWVAVG 104
PREVIG + LN + S +L+ D W+AV
Sbjct: 198 PREVIGLTLKKLGKSYNTENLDQVPDLEKELRRLNQQVKFYASTTYLEPLITEDTWLAVA 257
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS DV+P + + A++P+SG ++W DLW PA+ +T L QWI+
Sbjct: 258 WSDDVMPVLARYPQLAAIIPQSGTAVWVDLWVRPASVSKDT------------LSDQWID 305
Query: 164 FCLQTARALPFKQEVIPGASPSALESTLV------KLPGELLKGKPSLDTNLIAGVPPAE 217
FC Q A KQ + S S + + +V KL LL + E
Sbjct: 306 FCWQPNIA---KQISLLTKSNSPISTNIVASEIQEKLRNLLLSNR--------------E 348
Query: 218 ILARFEFLEPLS 229
+ + EFL PL+
Sbjct: 349 VFDKSEFLLPLN 360
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 44/252 (17%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+ ++R+ G++ G I APYRWGT +IAY+ K + P +DW DLW L+ RI
Sbjct: 141 QTLVKRDQQGQLQDNGLIWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRI 196
Query: 62 SMVNSPREVIG---------------SIAVQLNLALLA-NQ------SAHHLKAFGIGDV 99
S+V+ REV+G QL LLA NQ S H+L+ +GDV
Sbjct: 197 SVVDQYREVMGLTLKKLGQSYNTEKLDQVPQLKTELLALNQQVKYYSSDHYLQPLVVGDV 256
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
WV+VGWS++++P V N+ AVVP SG S+W+D+W P A + K LS
Sbjct: 257 WVSVGWSNEIIPLVTKNRNIKAVVPTSGTSIWSDVWVKPKAKESQNK--------LSETA 308
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
QW+ FC Q +A ASP +L E++ N + + PA I
Sbjct: 309 KQWLNFCWQ-PQAAKLISLFADAASPMIDRIDKKELSSEVI-------NNPLLFIDPA-I 359
Query: 219 LARFEFLEPLSE 230
+ EFL+PLS+
Sbjct: 360 FEQCEFLQPLSK 371
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 24/153 (15%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
++RN+ GE DP+GKI PYRWGT V+AY+ + P +DW+DLW+PEL ++S++
Sbjct: 117 VQRNERGEPDPQGKIWGLPYRWGTTVMAYRADLIQPTGWWP-QDWEDLWKPELTQKLSLL 175
Query: 65 NSPREVIGSIAVQLN-----------------LALLANQ-----SAHHLKAFGIGDVWVA 102
N PREVIG + +L L L Q S +L++ +GD W+A
Sbjct: 176 NQPREVIGLVLKKLGQSYNTADINQVSGLKPALEELRQQTRFFASTDYLQSLIMGDTWIA 235
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLW 134
WS+D+LP + SN+ A+VPKSG +LWAD W
Sbjct: 236 QAWSTDILPILNRYSNIKAIVPKSGTALWADCW 268
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 111/240 (46%), Gaps = 48/240 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
GK+ PYRWG IAY+ K PI W DLWR EL G+I++ N PREVIG
Sbjct: 129 NGKVWGIPYRWGLTAIAYRSDKLD----IPINGWADLWRTELKGKITLPNDPREVIGLTL 184
Query: 73 ------------------SIAVQ-LNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPAV 113
+ A+Q LN +L S +L+ IGD W+AVGWS D++
Sbjct: 185 KKLGYSYNTANIKAIAPLTPALQALNQQVLTYTSDSYLQPLLIGDSWLAVGWSQDIVNTA 244
Query: 114 KHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
+ S++ VV P G +LW+DLW P QI G W++ CL A A
Sbjct: 245 EQNSDIKVVIPAEGTALWSDLWVFPQRVNRPENQIFG---------QDWLDLCLTPAIA- 294
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEAT 232
++ +A L KLP + T+ I PP +ILA+ E + PLSE +
Sbjct: 295 ---NQITALTDATATNPDLGKLPKSV--------TSNILKFPPDQILAKSELILPLSETS 343
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 127/254 (50%), Gaps = 51/254 (20%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R LRR+ G G+I AAPYRWGT +IA+++ + +P++DW DLWRPEL G++
Sbjct: 115 RQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRL----TSPLQDWTDLWRPELRGQL 170
Query: 62 SMVNSPREVIGSIAVQLN-----------------LALLANQ-----SAHHLKAFGIGDV 99
+ + PREVIG +L LA L Q S ++L+ +GD
Sbjct: 171 ILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVKLYSSRNYLQPLLLGDA 230
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
AVGWS+D+L A++ S + AVVP+SG ++W DLW P GRV +
Sbjct: 231 LAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQ----------GRVSEV--FS 278
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+WI+F A F Q + P ASP+ L + V +D N + +PP +
Sbjct: 279 DRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAVA----------PVDANPLQ-IPPTAV 326
Query: 219 LARFEFLEPLSEAT 232
L + E + PL EA
Sbjct: 327 LDKSELILPLPEAV 340
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 127/254 (50%), Gaps = 51/254 (20%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R LRR+ G G+I AAPYRWGT +IA+++ + +P++DW DLWRPEL G++
Sbjct: 103 RQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRL----TSPLQDWTDLWRPELRGQL 158
Query: 62 SMVNSPREVIGSIAVQLN-----------------LALLANQ-----SAHHLKAFGIGDV 99
+ + PREVIG +L LA L Q S ++L+ +GD
Sbjct: 159 ILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVKLYSSRNYLQPLLLGDA 218
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
AVGWS+D+L A++ S + AVVP+SG ++W DLW P GRV +
Sbjct: 219 LAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQ----------GRVSEV--FS 266
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+WI+F A F Q + P ASP+ L + V +D N + +PP +
Sbjct: 267 DRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAVA----------PVDANPLQ-IPPTAV 314
Query: 219 LARFEFLEPLSEAT 232
L + E + PL EA
Sbjct: 315 LDKSELILPLPEAV 328
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 42/260 (16%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
R +R++ G G+I PYRWGT VI Y++ K + N+ +DW DLW P+L RI
Sbjct: 140 RELAQRDERGNSSSTGQIWGVPYRWGTTVIIYRRDKLTEANIPLPQDWADLWNPQLRQRI 199
Query: 62 SMVNSPREVIG-----------------SIAVQLNLALLANQ-----SAHHLKAFGIGDV 99
S+++ REVIG + +Q LA L Q + H+L+ IGD
Sbjct: 200 SLLDRSREVIGLTLKKLGYSYNAADLDRVLNLQTELAKLHQQVKFYSADHYLQPLVIGDT 259
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGL---- 154
WVAVGWS D ++ + AVVP+SG ++ ADLW P+ S ++ R L
Sbjct: 260 WVAVGWSLDASELIQKNPQIGAVVPRSGTAISADLWVQPSLS----PKLSPANRALLSNS 315
Query: 155 --SPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
L ++WI+ CLQ + + PGA+P +P P + NL+
Sbjct: 316 NRLKLSNKWIDHCLQPQSSNQIS-VLTPGAAPLLTNLNPNDIP-------PDVRKNLLT- 366
Query: 213 VPPAEILARFEFLEPLSEAT 232
+P E+L + EF+ P+S T
Sbjct: 367 LPSKEVLDKSEFIYPVSPTT 386
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 118/252 (46%), Gaps = 53/252 (21%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RR+ G GKI APYRWG +IA++K KFR P +DW DLWR EL G IS+
Sbjct: 136 VRRDLQGNPSTEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKGHISLP 194
Query: 65 NSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
+ PREVIG +LN L S+ +L+ +GD W A
Sbjct: 195 DQPREVIGLTLKKLGQSYNLEDLDTISELPQTLKELNEQTLFYASSQYLEPLILGDTWAA 254
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD+LPA+ ++ AV+P SG++LWADLW S ET I+QW
Sbjct: 255 VGWSSDILPALAREPDLDAVLPASGSALWADLWVQVQPS--ET-------------INQW 299
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I + + A + S T+ L L K S LIA + R
Sbjct: 300 INYWWEDTVA----------NNLSKFTDTISPLLSTTLPVK-SQSHRLIAA---PKQFER 345
Query: 222 FEFLEPLSEATL 233
EFL PLS +TL
Sbjct: 346 SEFLLPLSPSTL 357
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 36/182 (19%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
R+ G + G + APYRWGT +IAY+ K I+DW DLW P+L RIS+V+
Sbjct: 144 RDQNGIPNKNGFVWGAPYRWGTTLIAYRADKLD----GEIKDWSDLWDPKLENRISLVDQ 199
Query: 67 PREVIGSIAVQLNLAL----LAN------------------QSAHHLKAFGIGDVWVAVG 104
PREVIG +LN + L N S ++L+ +G+VW +VG
Sbjct: 200 PREVIGLTLKKLNKSYNTKNLKNIPQLRSELQAFNKQVKYYNSQYYLQPLLMGEVWASVG 259
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS+D++P + N+ AV+P SG SLW+D+W P + + T LS + +WI
Sbjct: 260 WSNDIIPILSRNRNIKAVIPSSGTSLWSDIWVAPKNNNIST---------LSEIAQRWIN 310
Query: 164 FC 165
FC
Sbjct: 311 FC 312
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 115/252 (45%), Gaps = 53/252 (21%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+RR+ G GKI APYRWG +IA++K KFR P +DW DLWR EL IS++
Sbjct: 136 VRRDLQGNPSAEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKEHISLL 194
Query: 65 NSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
+ PREVIG +LN L S+ +L+ +GD W A
Sbjct: 195 DQPREVIGLTLKKLGQSYNLEDLDTISELPQTLKELNEQTLFYASSQYLEPLILGDTWAA 254
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
VGWSSD+LP + ++ AV P SG++LWADLW S ET I+QW
Sbjct: 255 VGWSSDILPTLAREPDLEAVFPASGSALWADLWVQVQPS--ET-------------INQW 299
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I + + A + S T+ L L K S L+A + R
Sbjct: 300 INYWWEDTVA----------NNLSKFTDTISPLLSTTLPVK-SQSHRLVAA---PKQFER 345
Query: 222 FEFLEPLSEATL 233
EFL PLS TL
Sbjct: 346 SEFLFPLSPPTL 357
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 29/161 (18%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHN---LAPIEDWKDLWRPELAGRISM 63
R+ AG+ DPRG++ AAPYRWG ++AY++ K + + API DW DL +P+L GR++
Sbjct: 44 RDGAGQPDPRGEVWAAPYRWGATLVAYRRDKLGRADGGGGAPIRDWSDLLQPQLKGRVAF 103
Query: 64 VNSPREVIGSIAVQLNLAL-----------LANQ--------------SAHHLKAFGIGD 98
++SPR+V+G+ L L L+ Q S+ HL+A G GD
Sbjct: 104 MDSPRDVVGAALKTLGLGYNSSAADIRRCGLSEQDVRTRVQRLVRVFSSSDHLRALGAGD 163
Query: 99 VWVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPA 138
V VGWS D+LP V +N+ A P SG SL+AD W IPA
Sbjct: 164 VDAVVGWSDDLLPLVLRTNNLEAAAPLSGTSLFADCWCIPA 204
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 98/193 (50%), Gaps = 35/193 (18%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+ ++RN G++ G I APYRWGT +IAY+ K + P +DW DLW L+ RI
Sbjct: 141 QTLVKRNKQGQLQDNGLIWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRI 196
Query: 62 SMVNSPREVIG---------------SIAVQLNLALLA-------NQSAHHLKAFGIGDV 99
SMV+ REVIG + QL LLA S H+L+ +GDV
Sbjct: 197 SMVDQYREVIGLTLKYLGHSYNTENLAQVPQLKTELLALNEQVKYYSSDHYLQPLLVGDV 256
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
V+VGWS++++P + N+ AVVP SG SLW+D+W P + + LS
Sbjct: 257 DVSVGWSNEIIPLITKNRNIKAVVPTSGTSLWSDIWVKPKVKEGQNE--------LSETA 308
Query: 159 HQWIEFCLQTARA 171
QW+ FC Q A
Sbjct: 309 KQWLNFCWQPQAA 321
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 34/184 (18%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
R+D G +GK+ AAPYRWG+ ++ Y++ KF L +DW DLWR +L R+S+++
Sbjct: 147 RDDRGFPSSQGKVWAAPYRWGSTMMIYRRDKFADLGLKAPQDWSDLWRDDLRNRVSLLDH 206
Query: 67 PREVIG--------SIAVQ--------------LNLALLANQSAHHLKAFGIGDVWVAVG 104
PRE+IG S Q LN + S+ +L+ +GD ++ G
Sbjct: 207 PREIIGLTLKKLGKSYNTQDLSTVPQLEAELQSLNKNVKFYDSSKYLEPLLLGDTLISTG 266
Query: 105 WSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
WS D+LP + + A+VP+SG ++WAD+W P S+ + L+ QWI
Sbjct: 267 WSHDILPVMTRYPQLSAIVPESGTAIWADMWVNPINSQNQVD-----------LLSQWIN 315
Query: 164 FCLQ 167
F Q
Sbjct: 316 FYWQ 319
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 104/228 (45%), Gaps = 41/228 (17%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAV 76
GK PYRWGT ++ Y+K K +K + + DW+DLWR EL +IS+++ REVIG +
Sbjct: 145 GKTYGIPYRWGTTLLLYRKDKLKKFDWQ-LTDWEDLWREELKNKISLLDHSREVIGFVLK 203
Query: 77 QL-----------------NLALLANQ-----SAHHLKAFGIGDVWVAVGWSSDVLPAVK 114
L LL S H+L+ GD WVA WS D L +K
Sbjct: 204 NFGFSYNDKDPEAIAGLSEELGLLHRNVKFYSSTHYLQPLITGDTWVAQAWSQDALSLMK 263
Query: 115 HMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALP 173
N+ AVVPKSG +LW DLW P S E L P W+EFC
Sbjct: 264 RYRNLGAVVPKSGTALWCDLWVQPKKSERE-------FADLKP----WLEFCANERAINQ 312
Query: 174 FKQEVIPGASP-----SALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
F Q ASP L++ + + P + + ++ +I +PP+
Sbjct: 313 FAQSTF-AASPLIYQTENLDAKVTENPLIFVNPETYQNSEIIETLPPS 359
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 24/146 (16%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
+ ++ APYRWG VIAY+K KF + P DW+DLWR L R+S+++ PREVIG
Sbjct: 144 KQEVWGAPYRWGMTVIAYRKDKFEQLGWLP-ADWQDLWRSPLRHRLSLLDHPREVIGLTL 202
Query: 73 -------------SIA------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPAV 113
IA QLN L S +L+ +GD W AVGWS+DVLP +
Sbjct: 203 KKLGYSYNTNAPAKIADLERELAQLNRQALFYSSDTYLQPLVLGDTWAAVGWSTDVLPLM 262
Query: 114 KHMSNVAV-VPKSGASLWADLWAIPA 138
+ + V VP+SG +LWAD+W PA
Sbjct: 263 RRNDKIGVIVPRSGTALWADVWVRPA 288
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 118/268 (44%), Gaps = 65/268 (24%)
Query: 19 ICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRISMVNSPREVI------ 71
+ PYRWG +IAY+K K P DW DLWRPE R+ M + PR+++
Sbjct: 289 MYGVPYRWGCTLIAYRKDKLPASLRERPPRDWDDLWRPEFKRRVGMGSGPRQMLTAALRA 348
Query: 72 -------------GSIAVQLNL----ALLANQSAHHLKAFGIGDVWVAVGWSSDVLPAVK 114
G++ +L LL +L+A G GD W+AVG S DVL +
Sbjct: 349 EGMSANADGWGGGGNVRARLESLRREQLLIQDDVQYLQALGNGDAWIAVGNSDDVLSMAR 408
Query: 115 HMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALP 173
S + VVP SG +L+AD+W +PA++ ++ G G+SPL +QW ++ Q AR +
Sbjct: 409 KSSLIGVVVPMSGTTLFADVWCVPASA---ARKPG----GVSPLTNQWFDYTTQPAR-VN 460
Query: 174 FKQEVIPGASPSALESTLVKL--------PGELLKGKPSLDTN----------------- 208
+ + G SP + + G + + D N
Sbjct: 461 LRVGLRGGVSPIVFDGGGIDYASIGMNGPTGGFVDYDAAGDKNGTRGMGAKIKDFLSRDE 520
Query: 209 -------LIAGVPPAEILARFEFLEPLS 229
+ G+PP E+ AR EFL PLS
Sbjct: 521 KNRGGEIMQGGMPPDEVWARSEFLYPLS 548
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRISM 63
LRR+ G RGK+ A PYR ++IAY+K F+ + N PI W DLWRPELAGRI+M
Sbjct: 142 LRRDREGYSSERGKLWAVPYRTQGLMIAYQKPIFQTNTNNKPITKWADLWRPELAGRIAM 201
Query: 64 VNSPREVIGSI-----------------AVQLNLALLANQ-----SAHHLKAFGIGDVWV 101
N PR I + VQ L L Q S +LKA DVW+
Sbjct: 202 PNQPRLAIAIVLKALGYSVNDEAVLLQDDVQEQLLALYRQVKVFDSQAYLKALVNEDVWL 261
Query: 102 AVGWSSDVLPA-VKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
AVGWS D+L V++ AV P+ G L +DLW P ++L +
Sbjct: 262 AVGWSGDILATLVRYRRLGAVHPQEGTVLTSDLWVAPTDAKLTEEA------------QA 309
Query: 161 WIEFCLQTARALPFKQEV---IPGASPSALESTLVKLPGEL 198
W+EFC Q +P E+ G SPS VK+P +L
Sbjct: 310 WMEFCWQ----MPIATEISVSSYGVSPSFFLPD-VKVPEQL 345
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 2 RVYLRRND-AGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR 60
R +RR+ +G + G I APYR+G V IAY+K K K + P DW DL+ P L G
Sbjct: 166 RQLVRRDPRSGLLSSSGDIFGAPYRFGCVTIAYRKDKLPK-GVKPPTDWSDLFDPRLQGM 224
Query: 61 ISMVNSPREVIG--------SIAV---------------QLNLALLANQSAHHLKAFGIG 97
I M N+PR V+ S+ V QL ++ +L+A G
Sbjct: 225 IGMPNAPRLVLSAALKAEGMSVNVGDVGGVDGRVSARVRQLRESVKVFDDLQYLQALACG 284
Query: 98 DVWVAVGWSSDVLPAVKHMS-NVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
D V VG S DV + + V VVP+SG +LW+D W +P S +GG G SP
Sbjct: 285 DCAVVVGPSEDVFSVARRSTLIVPVVPRSGTTLWSDCWVVPTTS---VTNVGG---GPSP 338
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASP-----SALESTLVKLPGELLKGKPSLDTNLIA 211
+ QWI + L AR + + + G SP +ES + P + D +++
Sbjct: 339 ALEQWINYTLSPAR-VNMRVGLKGGISPLMFDGRGIESGYARYPNVARPVLGTSDEDMLK 397
Query: 212 G-VPPAEILARFEFLEPLSE 230
G +P + A EF PL++
Sbjct: 398 GWIPDDSVWAASEFQLPLTD 417
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 66/251 (26%)
Query: 17 GKICAAPYRWGTVVIAYK--KSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG-- 72
G++ PYRWG+ VIAY+ ++KF I+ W DLWRPEL RI + +SPREVIG
Sbjct: 190 GQVWGVPYRWGSTVIAYRPDRTKFE------IKSWADLWRPELKRRIVLPDSPREVIGLV 243
Query: 73 --------------SIAV------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+IA QL+ +L S +L+ I D W VGWS D+
Sbjct: 244 LKKLGDSYNNENLNAIAALPTELEQLHQQVLFYSSDRYLQPLIIEDAWAVVGWSHDIEAQ 303
Query: 113 VKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+ + VVP+ G +LW+D+W +P T S ++WI + L A A
Sbjct: 304 IDRQPKLRVVVPEEGTALWSDIWVLPKQQPRPTN---------SQAAYKWINYTLSPAIA 354
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV-------PPAEILARFEF 224
+AL + +P ++ +L A + P E++A+ E
Sbjct: 355 NQI----------TALTDAVSTMP---------VNADLPAKIRANQLKFPSPEVIAKSEL 395
Query: 225 LEPLSEATLSD 235
L+PLS+ LS+
Sbjct: 396 LQPLSDDALSE 406
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 33/173 (19%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAV 76
G+I P+RWG IAY++ + PI DW DLWRPELAG++++ + PREVIG +
Sbjct: 143 GQIWGVPWRWGVTAIAYRRDRVSD----PIRDWADLWRPELAGKLTLPDHPREVIGLVLK 198
Query: 77 QLNLA----------------------LLANQSAHHLKAFGIGDVWVAVGWSSDVLPAVK 114
+L + +LA SA +L + D WVAVGWS D+
Sbjct: 199 KLGRSYNDPLDPEEAELRRELGSLHRQVLAYTSADYLPMLRLADSWVAVGWSQDLYATQA 258
Query: 115 HMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+ + V +P SG+++W D+W P + + ++ G L+ WI+F L
Sbjct: 259 NYPELEVAIPASGSAIWWDVWVRPHRAHNASPELEGS------LLADWIDFVL 305
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 35/157 (22%)
Query: 12 EIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
+DPR G+I P+RWG IAY++ + R+ PI DW DLWRPELAG++++
Sbjct: 130 NLDPRWQAAALREGQIWGVPWRWGVTAIAYRRDRVRE----PIRDWADLWRPELAGKLTL 185
Query: 64 VNSPREVIG-----------------SIAVQLNLALLANQ-----SAHHLKAFGIGDVWV 101
+ PREVIG + ++ L L Q S+ +L + D WV
Sbjct: 186 PDHPREVIGLTLKKMGRSYNDPLNPEDVELRQELGSLHRQVLTYTSSDYLPILRLADSWV 245
Query: 102 AVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIP 137
AVGWS D+ + +AVV P SG+++W D+W P
Sbjct: 246 AVGWSQDLYATQANYPELAVVIPASGSAIWWDVWVRP 282
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 55/253 (21%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAV 76
G + AAPYRWG +V+ Y ++ F P + W DLWR ELAGR+ + PR ++G I
Sbjct: 148 GSVWAAPYRWGALVMLYNRAPFEALGWQP-QSWTDLWRSELAGRVILPRHPRLLLGIILK 206
Query: 77 QLNLAL-------------------------------LANQSAHHLKAFGIGDVWVAVGW 105
L + L H+++ G+ WVAVGW
Sbjct: 207 SLEESANHPDPTQVAELGARMAAMAGAKPNPAGTSPALTFADTHYIEPLIRGEAWVAVGW 266
Query: 106 SSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEF 164
S+++ P ++ + AVVP+ G L ADLW PA Q G R+ LS WI++
Sbjct: 267 STEIRPVLEGYRQLAAVVPEPGTLLSADLWVHPA------PQQGARM-PLSAPEQAWIDY 319
Query: 165 CLQTARALP---FKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
Q ALP F Q G +P L+ T+ L P + +P EI+A
Sbjct: 320 WWQENTALPLTLFSQ----GLAPQLLDGTIGDL-------TPDFSAAQLL-LPEGEIMAN 367
Query: 222 FEFLEPLSEATLS 234
EFL PL+ +L+
Sbjct: 368 SEFLLPLAADSLA 380
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 41/261 (15%)
Query: 2 RVYLRRN-DAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR 60
R +RR+ G + G+I APY +G VIAY+K K K + P DW+DL+ P L G
Sbjct: 121 RTLVRRDARTGRVSAGGEIYGAPYGFGCAVIAYRKDKLPK-GVKPPRDWEDLFDPRLKGL 179
Query: 61 ISMVNSPREVI--------------------GSIAVQLNLALLAN----QSAHHLKAFGI 96
I M N+PR V+ G ++ ++ AL N + +A
Sbjct: 180 IGMPNAPRLVLSAALKAEGMSANASDIGGADGRVSARVR-ALRENVKVFDDLQYTQAIAC 238
Query: 97 GDVWVAVGWSSDVLPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLS 155
GD V +G S DV + + + + VP SG +LW+D W +P A+ + + G S
Sbjct: 239 GDCAVVIGPSEDVFSVARRSTLIGLAVPSSGTTLWSDCWVVPTAT------VANKGGGPS 292
Query: 156 PLIHQWIEFCLQTARALPFKQEVIPGASP-----SALESTLVKLPGELLKGKPSLDTNLI 210
P++ QWI++ LQ AR + + + G SP ++ + P S D +++
Sbjct: 293 PVLEQWIDYTLQPAR-VNMRVGLKGGISPLMFDGRGVDGGYARYPNVARPVLGSDDGDML 351
Query: 211 AG-VPPAEILARFEFLEPLSE 230
G +P + + EF PLS+
Sbjct: 352 KGWIPDDSVWSASEFQLPLSD 372
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 32/177 (18%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAV 76
GK+ PYRWG +IAY+K K L P DW DL+RP+ ++ + + R ++ ++A+
Sbjct: 340 GKLYGVPYRWGCYLIAYRKDKI-PRGLRPPTDWPDLFRPQYKKKVGIASGSRFML-TVAL 397
Query: 77 Q---------------------LNLALLANQ-SAHHLKAFGIGDVWVAVGWSSDVLPAVK 114
+ L LA Q L+ GDVW+ G S DVL
Sbjct: 398 RAGGRSANATDVDDATRNRLYDLRTTQLATQVDLDALQGLSNGDVWIIAGNSDDVLKTAA 457
Query: 115 HMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
SN+ VVP SG +L+AD W +PAA+ L+ + G+SPL+ QW +F Q AR
Sbjct: 458 KSSNIGVVVPSSGTTLYADAWCVPAAA-LD------KPGGVSPLVDQWFDFTTQPAR 507
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 110 LPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
P K MSNVAVV P +G SLWADL + L+ + G ++ LIH+WIE LQ
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQ-LPRDLKLIRSGAKLEDHPSLIHEWIEIRLQA 61
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
ARALPFKQEVIPGA+PS + +P EL K KP L TNLIA V P +I
Sbjct: 62 ARALPFKQEVIPGATPSD-----IGVPKELAKCKPKLGTNLIAEVHPPDIF 107
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 56/246 (22%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
++ PYRWG IAY+ K + I W DLWRPEL ++S+ + REVIG +
Sbjct: 131 NNQVWGVPYRWGATAIAYRSDKLKFD----ITQWSDLWRPELKQKLSLPDDAREVIGLVL 186
Query: 76 VQL-------NLA-------------------LLANQSAHHLKAFGIGDVWVAVGWSSDV 109
++ NLA +L S ++L++ D AVGW+SD+
Sbjct: 187 KKMGQSYQVDNLAERKDIFTALIQDLKSLSSQVLTYSSDNYLQSLLNTDTLAAVGWTSDM 246
Query: 110 LPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
K N+ VV P+ G +LW+D+W IP G V + W+ FCL
Sbjct: 247 YKTAKQNPNLKVVIPQDGTALWSDIWVIPK----------GEVAIAA---TAWMNFCLTP 293
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A+ + SPS S L K+P +K P +ILA+ E + PL
Sbjct: 294 EIAIQLT-SLTDAVSPS---SALDKVPNS-VKADP-------IKFFSQDILAKSELILPL 341
Query: 229 SEATLS 234
S TL+
Sbjct: 342 SPTTLT 347
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 103/234 (44%), Gaps = 71/234 (30%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
RN AG DP G+ V AY++ + + PI DW DL +P LAGR++M++S
Sbjct: 191 RNAAGMPDPTGE-----------VYAYRRDRLLRRGGRPILDWCDLLQPALAGRVAMLDS 239
Query: 67 PREVIGSIA----------------------------------------------VQLNL 80
PRE++ + +Q +
Sbjct: 240 PRELLAAAVRSLAAENAGLGDGGGRGVDGGKSGRAWVSVNASARELAAAGISEEVLQGRV 299
Query: 81 ALLANQ-----SAHHLKAFGIGDVWVAVGWSSDVLP-AVKHMSNVAVV-PKSGASLWADL 133
A Q S H++A GDVW VG+S +++ A + S++ ++ P SG LWAD+
Sbjct: 300 AAFRRQVRLFSSQDHVRALQAGDVWAVVGYSQELVQLAERSGSSIELLAPLSGTQLWADV 359
Query: 134 WAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
WA+PA +R G R G SPL+ WIEF L R Q + G +P+AL
Sbjct: 360 WAVPAGAR-----GGHRHSGPSPLLPVWIEFTLSPGRIT--GQPSLKGGAPAAL 406
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 88/206 (42%), Gaps = 41/206 (19%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLAL 82
PYRWG + Y++ F P DW LW P + G S++N+PREVIG L L+
Sbjct: 134 PYRWGATALIYRRDFFADLGWEPT-DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGLSY 192
Query: 83 LANQSAHH----------------------LKAFGIGDVWVAVGWSSDVLPAVKH--MSN 118
N A H L+ +G +AVGWS+D+LP ++ +
Sbjct: 193 --NSPAPHPELRERLQHLRQGCRFLSSDAYLQPLMLGSTQLAVGWSTDLLPLLQQDPQTY 250
Query: 119 VAVVPKSGASLWADLWAIP------AASRLE---TKQIGGRVRGLSPLIHQWIEFCLQTA 169
AV P SG +LW DLW P A + L Q+ R+ SP + +T
Sbjct: 251 GAVFPASGTALWVDLWVCPREPNAAALAWLNYWWQPQVAERLSQFSPAPSPLVRNLRET- 309
Query: 170 RALPFKQEVIPGASPSALESTLVKLP 195
IP A+P+A + V LP
Sbjct: 310 ----LLSRYIPFATPTAFAKSEVLLP 331
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 109/267 (40%), Gaps = 62/267 (23%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKF---RKHNLAPIEDWKDLWRPELA 58
+ + RR+ G+I G++ + PY+ +V+ Y+ S+F + P W+DL P+L+
Sbjct: 128 QAFGRRDHTGQITSDGELWSVPYKLQPLVVVYRHSQFLAKSRTGKQPFSSWQDLLAPDLS 187
Query: 59 GRISMVNSPREVIG----------------------SIAVQLNLALLA-----------N 85
I++ + PR +I + QLN L A
Sbjct: 188 RSIALPSHPRILISLLQKLQTGSFNPVSTDNPVSSEQLLSQLNDQLAAPFAKLTAQVKTY 247
Query: 86 QSAHHLKAFGIGDVWVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLET 144
S LKA DV V VGWSSDV A+K ++ AVVP G+ L AD+W P + L +
Sbjct: 248 DSNTALKALINEDVKVVVGWSSDVAVALKRYRDLRAVVPDEGSLLSADMWVQPKGATLTS 307
Query: 145 KQIGGRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPS 204
WI FC Q A G SP L +T +LP L + + S
Sbjct: 308 A------------AKTWISFCWQQGPATELS-TTPKGISPIFL-ATDKQLPSSLERTQLS 353
Query: 205 LDTNLIAGVPPAEILARFEFLEPLSEA 231
L L E L PLS++
Sbjct: 354 L-----------RALQNSELLSPLSQS 369
>gi|119512455|ref|ZP_01631537.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
gi|119462921|gb|EAW43876.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
Length = 244
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 66
R++ G +D +G + AAPYRWG+ VI Y + K + P +DW DLWR L RIS+V+
Sbjct: 161 RDNQGNLDTQGNVWAAPYRWGSTVIVYNRQKLQSLGWTP-QDWSDLWRDGLQERISIVDQ 219
Query: 67 PREVIGSIAVQL 78
REVIG + +L
Sbjct: 220 SREVIGLVLKKL 231
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 55/245 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP G + P WGT + Y K + PIEDW DLW+ + L+ R++++N REV+
Sbjct: 148 DP-GNRYSVPLAWGTTGLIYNTEKIKY----PIEDWDDLWKNQKALSKRMTLLNDLREVM 202
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L +L +A+ +GD+ VA+ +SSD
Sbjct: 203 GAALRMLGYSLNTTNPNEIREAYERLSELKPDLASFTTDAWRPQMLVGDLMVAMCYSSDA 262
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ +N+ +VP+SG+SLW D IP A E ++WI F LQ
Sbjct: 263 NEVIPENTNLQYIVPRSGSSLWTDTLVIPKFAPNPEAA-------------YKWINFMLQ 309
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A + ++PS L+ +P + N I PP EILA+ + + P
Sbjct: 310 GDVAASLVDR-LSFSTPSEEAFNLL---------EPEVRENKIL-FPPEEILAKCQGIAP 358
Query: 228 LSEAT 232
+ E T
Sbjct: 359 VGEVT 363
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 56/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + + PY WGT+ I Y S + I DW DLW P G+I M++ RE+IG
Sbjct: 127 DPQNQ-YSVPYFWGTLGIIYNTSMIEE---GSIRDWADLWNPAYQGKILMIDGAREMIGI 182
Query: 73 ---SIAVQLN---------------------LALLANQSAHHLKAFGIGDVWVAVGWSSD 108
S+ LN + L+ ++ H+ G+V +AV +S +
Sbjct: 183 GLQSLGYSLNDIDSSHIRAAADKMKTLMPNVVGLITDEIKMHIAE---GEVPLAVTFSGE 239
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
A+ ++A VVP+ G++LW D +AIP +I V G LI+ I
Sbjct: 240 AATAMDQNEDLAYVVPEKGSNLWLDTFAIP--------KIADNVEGAYALINFLISKEAS 291
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A A E + A+P+ +E+ LP E+ K A P I+ + E
Sbjct: 292 IANA-----EYVGYATPN-MEAK-AALPKEITDDK--------AFYPDQAIMDKLEVYRN 336
Query: 228 LSEATL 233
L +A L
Sbjct: 337 LGQAKL 342
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + Y WG IAY +K+ K PI W+DLW P+ GR+ ++N REV+G
Sbjct: 141 FDP-GNKHSVVYTWGITGIAYN-TKYVKE---PISSWQDLWNPKYKGRLVLLNDSREVLG 195
Query: 73 ----------SIAVQLNLALLANQ---SAHHLKAFGIGDV---------WVAVGWSSDVL 110
S Q L N A ++ AF D+ W+ WS D
Sbjct: 196 MALKKNGFSNSTKDQKELDKAFNDLKTLAPNVLAFDTDDIKQKFITEEAWIGTMWSGDAA 255
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +VA V+PK G ++WAD AIP ++
Sbjct: 256 FVYKDNKDVAFVIPKEGTTIWADTLAIPKGAK 287
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 108/252 (42%), Gaps = 59/252 (23%)
Query: 7 RNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMV 64
R + DP G + P WGT + Y + + P EDW LW + +LA R+++V
Sbjct: 136 RFQQADYDP-GNRHSVPVSWGTTGLVYNTQQVQP----PPEDWDYLWVYQQQLAKRMTLV 190
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFGI----------------------GDVWVA 102
N REV+G+ +L + + H A+ GD+ +A
Sbjct: 191 NDVREVMGAALKKLGYSYNSTNVEHIQAAYQALMDLKPAIASFTSDAWRPQILSGDLKIA 250
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
+ +SSD + ++ V+P+SG+SLW D AIP + V G + W
Sbjct: 251 MCYSSDATEIMPENEDLRYVLPESGSSLWIDTLAIP--------KTAPNVEG----AYAW 298
Query: 162 IEFCLQ---TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
I F LQ AR + E + A+P+ L LP +L DT+L PP E
Sbjct: 299 INFMLQPDVAARIV----ERLSFATPNKAAYNL--LPPDLKN-----DTSLF---PPEEA 344
Query: 219 LARFEFLEPLSE 230
L R E LEPL E
Sbjct: 345 LERCENLEPLGE 356
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 55/243 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 71
DP + + P+ WGT + Y + P EDW+ LW+ +L +I+++N REV+
Sbjct: 133 DPNNR-YSLPFNWGTTGLIYNSEILKN----PPEDWEYLWQNQQQLNNKITLLNDVREVM 187
Query: 72 GSIAVQLNLALLAN------QSAHHLKAFG----------------IGDVWVAVGWSSDV 109
G++ L + + Q+ L+A GD+ +++ +SSD
Sbjct: 188 GAVLKMLGYSYNSKNETEVKQAYEKLQALKGAIAAFDTDAWRNQIVAGDLLLSMCYSSDA 247
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPKSG+SLW D IP +R I G + WI F Q
Sbjct: 248 VKITQENPKFKYVVPKSGSSLWTDTVVIPTTAR----NIDG--------AYAWINFIFQP 295
Query: 169 ARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A Q + + +S +A ELL K D N+ PP IL + E + P
Sbjct: 296 EVAAQISQRLWVTTSSRAAF---------ELLPNKIKNDPNVF---PPDSILEKCERITP 343
Query: 228 LSE 230
L E
Sbjct: 344 LGE 346
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 95/242 (39%), Gaps = 49/242 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY WGTV I Y K N I W+DLW +L +I +V+ RE++G
Sbjct: 128 RGNTYSVPYFWGTVGIVYNKKLLGNKN---ITSWQDLWDKDLRNKIFLVDGVREIMGIGL 184
Query: 76 VQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVLPAV 113
+L H KA GD + +GWS + +
Sbjct: 185 TTTGYSLNDTNHQHLQKAKRKLDTLIPNVRAIVGDETKLLLANGDASIGIGWSGNAAEII 244
Query: 114 KHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
++ V+PK G++LW D IP ++ + + Q++ F L A
Sbjct: 245 DENPDLDYVIPKEGSNLWFDNMVIPKTAKNKKAAL------------QFMNFMLDPKVAA 292
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEAT 232
E + +SP+ ++ L LP E+ S D PP +I + E LS+
Sbjct: 293 Q-NTEYVHYSSPN--KAALKYLPKEI-----STDKRF---YPPKKITDQLEVYRNLSQKD 341
Query: 233 LS 234
+S
Sbjct: 342 IS 343
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 57/247 (23%)
Query: 14 DPR---GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPR 68
DPR G + P WGT + Y + RK P EDW+ LW +P L+ RI+++N R
Sbjct: 144 DPRYDPGNRHSVPMSWGTTGLVYNR---RKLQTVP-EDWRYLWDNQPMLSRRITLLNDMR 199
Query: 69 EVIGSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWS 106
EV+G+ L + A A A+ GD+ +A+ +S
Sbjct: 200 EVMGATLRMLGYSYNAEDPAQLEAAYEELVKLKPAIASFTSDAWRSQIITGDLLIAMSYS 259
Query: 107 SDVLPAVKHMSNVA-VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEF 164
SD + ++ ++P+SG+SLW D IP +A +E + W+ F
Sbjct: 260 SDAQLVTEENPDLEYLIPQSGSSLWVDTMVIPKSAPNVEAA-------------YAWLNF 306
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEF 224
+Q + + Q + G +P + + + LP E L+ P L PP ++LAR E
Sbjct: 307 MMQPSVLVDLCQRL--GFTPPSRAAADL-LPTE-LRNDPGL-------FPPDQVLARCEG 355
Query: 225 LEPLSEA 231
+ P+S A
Sbjct: 356 IAPVSGA 362
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 61/248 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPRE 69
DP+ + + PY WGT I Y K P W DL+ P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 70 VIGSIAVQL----------------NLAL-----LANQSAHHLKAFGI-GDVWVAVGWSS 107
IG+ L NL L LA + F + GD+ +A GWS
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYLARYDSETYDDFLLTGDLVLAHGWSG 236
Query: 108 DVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+ A SN+ V+P+ G +WAD AIP +S+ R+ L H +I+F L
Sbjct: 237 EFAKAHVENSNIRYVIPREGGVIWADNLAIPKSSQ--------RID----LAHTFIDFLL 284
Query: 167 Q---TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
+ A+ + F + PS E+ + E++ N A PP EIL + E
Sbjct: 285 RPTINAKIVNFLR------YPSTNEAATAHILPEIV--------NDPAIYPPEEILEKLE 330
Query: 224 FLEPLSEA 231
++ + +A
Sbjct: 331 WIRDVGDA 338
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + GR++++N REV+G
Sbjct: 121 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGRVTLLNDSREVLG 175
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 176 MALKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDTWIGTVWSGDAA 235
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 236 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 267
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + GR++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGRVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 62/240 (25%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSIAVQL 78
+ P WGT Y K P +DW LW+ + L+ RI+++N REVIG + L
Sbjct: 139 SVPMSWGTTGFIYNSEKLE----TPPQDWDYLWQNQKKLSKRITLLNDAREVIGGVLKML 194
Query: 79 NLALLAN-----QSAHH--------LKAFGI---------GDVWVAVGWSSDVL------ 110
+ + Q A+ + AF GD+ +A+ +SSD
Sbjct: 195 GYSYNSQSGKQIQQAYEKLQVLKPDIAAFSTDAWRNQILSGDLVLAMCYSSDAFLITRDN 254
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
P +K+ + PKSG+SLW D AIP + T I G ++WI F L+
Sbjct: 255 PKLKY-----ITPKSGSSLWTDTIAIP----ITTSNIDG--------AYEWINFMLKPEV 297
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
A Q + A+P+ ++ LP E ++ P+L PP IL + E L P+ E
Sbjct: 298 AARMSQR-LGVATPN--QAGFELLP-EKIQNNPTL-------FPPENILEKCERLSPVGE 346
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WNDLWNDKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITADAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 42/254 (16%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR--ISMVNSPREV 70
DP G++ A PYR ++AY+ K + + I DW D++ P + + ++PREV
Sbjct: 318 TDPNGRLFAVPYRVTATLLAYRADKLPR-GVEAITDWTDVFDPRFGNKTFVGCADAPREV 376
Query: 71 I------GSIAVQLNLALLANQSAH------------------HLKAFGIGDVWVAVGWS 106
+ G +N + N+ + +L+A GD+ VA G S
Sbjct: 377 LSAALKMGDPRNTINPKTIDNERSQRDALRRLRAKIKVSDDETYLRALQNGDISVAFGGS 436
Query: 107 SDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR--LETKQIGGRVRGLSPLIHQWIE 163
DVL + S V V P SG +L D++ P + T + SP I W++
Sbjct: 437 DDVLALCRRSSLVKPVFPPSGTALHCDVFVRPVLNEGGGYTSSVPHSAPSSSPGIDAWLD 496
Query: 164 FCLQTARALPFKQEVIPGASPSALESTLVKLPGE-LLKGKPSLDT--NLIAGVPPAEIL- 219
F L + R + + + G +P ++ G+ + G+ S D ++ G P ++
Sbjct: 497 FMLDSGR-INERGGLRSGLNP-------IQFDGDRIYGGRSSQDDVGDIFKGWLPDDMAW 548
Query: 220 ARFEFLEPLSEATL 233
+ EF+ PLS+A +
Sbjct: 549 SNSEFVLPLSDAAI 562
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGI-GDVWVAVGWSS--- 107
S+ LN AL N A +K + I GD + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITADAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K ++ VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDIEYVVPKEGGTIWADTLAIPKGAK 266
>gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae 2603V/R]
gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|410594609|ref|YP_006951336.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
gi|421532211|ref|ZP_15978578.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 2603V/R]
gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|403642577|gb|EJZ03410.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|410518248|gb|AFV72392.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
Length = 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGI-GDVWVAVGWSS--- 107
S+ LN AL N A +K + I GD + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|339301436|ref|ZP_08650537.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
Length = 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGI-GDVWVAVGWSS--- 107
S+ LN AL N A +K + I GD + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 131 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 185
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 186 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 245
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 246 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 277
>gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae NEM316]
gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|421147260|ref|ZP_15606950.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|401685938|gb|EJS81928.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
Length = 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGI-GDVWVAVGWSS--- 107
S+ LN AL N A +K + I GD + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 116 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 171 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 231 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 116 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 171 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 231 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVVG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae A909]
gi|406709561|ref|YP_006764287.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus agalactiae GD201008-001]
gi|424049369|ref|ZP_17786920.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae A909]
gi|389649040|gb|EIM70525.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|406650446|gb|AFS45847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae GD201008-001]
Length = 357
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 99/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKYWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGI-GDVWVAVGWSS--- 107
S+ LN AL N A +K + I GD + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDTQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 77 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 131
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 132 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 191
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 192 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 223
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y +K K N I+ W LW P+ G+I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYN-TKLIKDN---IDSWDALWNPKYKGQILMVDSQRDAIA 174
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGDVW----------VAVGWSSDVL 110
+L ++ A KA +GD +AV WS D +
Sbjct: 175 VALKKLGYSMNTTNKAELEKAKQELIKQKPLVHAYVGDEVKDLMTDEEGAIAVVWSGDAV 234
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+K+ N+ V+PK G++LW D IP S+
Sbjct: 235 TMMKNNKNLRYVIPKEGSNLWFDNMVIPKGSK 266
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V +VPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYIVPKEGGTIWADTLAIPKGAK 266
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+ +L A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKVDAELKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 57/249 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAP----IEDWKDLWRPELAGRISMVNSPR 68
DP + + PY WGTV I + NL P + W DLW P L +I +++ R
Sbjct: 126 FDPNNQ-YSIPYFWGTVGIIFNT------NLLPEGMELTGWHDLWDPALENQILLIDGAR 178
Query: 69 EVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWS 106
E+IG L +L H +A +GD +A+GWS
Sbjct: 179 EIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIVGDENKMLMANNEATIAIGWS 238
Query: 107 SDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
D + + +VP+ G++LW D + IP +R I G HQ+I F
Sbjct: 239 GDAADIMGENEAIDYLVPEEGSNLWFDNFVIPKTAR----NIDGA--------HQFINFM 286
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFL 225
L A E + ++P+ + L +P E+++ + P E+ R E
Sbjct: 287 LDAEIAAQ-NTEYVSYSTPN--KEALQFMPEEMVEDE--------RFYPDPELTDRLEVY 335
Query: 226 EPLSEATLS 234
E L + L+
Sbjct: 336 ENLGQRNLA 344
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 54/247 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP G + PY WGT+ I Y KF N + W DLWRPEL I +++ RE+I
Sbjct: 125 DFDP-GNQYSIPYFWGTLGIVYN-DKFV--NAEDMTSWNDLWRPELKDNIMLIDGAREII 180
Query: 72 G----SIAVQLNLALLA--NQSAHHLKAFG------IGD----------VWVAVGWS--- 106
G S+ +N + NQ+ L+ + D VAV +S
Sbjct: 181 GLGLNSLGYSVNSKNMDQLNQAVAKLRTLTPNVKAIVADEIKMYMENEESAVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+D++ H+ V+PK G +LW+D IP S+ Q G + +I F L
Sbjct: 241 ADMMYENSHLH--YVIPKEGTNLWSDNIVIPKTSK---NQEGA---------YAFINFML 286
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
+ A E I ++P+ E+ + +P E+++ K P E++A+ E
Sbjct: 287 EPKNAAQ-NAEYIGYSTPN--EAAMKLMPKEVVEDKQFY--------PTKEMMAKMEVYR 335
Query: 227 PLSEATL 233
L L
Sbjct: 336 DLGSKYL 342
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 35/156 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y SKF I+ W DLW+PEL G++ M++ REV+G
Sbjct: 126 FDP-GNHYSIPYFWGTLGIVYN-SKFIDE--GDIQSWDDLWKPELRGKVMMIDGAREVLG 181
Query: 73 SIAVQ-----LN---------------------LALLANQSAHHLKAFGIGDVWVAVGWS 106
I +Q LN ALLA++ +L + + +AV +S
Sbjct: 182 -IGLQSQGWSLNETDSQRLQKSADKMKTLMPNIQALLADEIKMYL---AMEESPIAVTYS 237
Query: 107 SDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ A++ N+ +VP+ G+++W D AIP ++
Sbjct: 238 GEAAMAMEENENLCYLVPQEGSNIWFDNLAIPKGAK 273
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 -------------------SIAVQLNL---ALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+ A L LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 -------------------SIAVQLNL---ALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+ A L LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP G Y WG IAY +K+ K + W DLW+ E GR+ ++N REVIG
Sbjct: 126 DPSGDYSVV-YTWGVTGIAYN-TKYIKDTPSS---WNDLWKDEYKGRVILLNDNREVIGM 180
Query: 73 -----------------SIAV----QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
+ AV +L LLA + + F + W+ WS D
Sbjct: 181 GLKKNGHSVNSKDPNEVTQAVDQLRKLTPNLLAFDTDTIKQKFIAEEAWIGTMWSGDASF 240
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K ++A ++PK GA +WAD +AIP ++
Sbjct: 241 THKDNPDIAFIIPKEGAVIWADTFAIPKGAK 271
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---VPTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 56/237 (23%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP--ELAGRISMVNSPREVIG------ 72
A PY WGTV I Y+ ++ PI WK L+ P +L G++ M++ PR++IG
Sbjct: 134 AIPYFWGTVGIVYRHDVIKE----PITHWKQLYSPAPDLKGKLGMIDEPRDLIGMGLKSL 189
Query: 73 ------SIAVQLNLALLANQSAHHLKAFGI------------GDVWVAVGWSSDVLPAVK 114
+++QLN QS + I G++ ++ ++ D L +
Sbjct: 190 GYSANSEVSLQLNEVEEVLQSQKAMVNSYIYMTLDEHSPIVTGEILASMIYNGDALMVKE 249
Query: 115 HMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIHQWIEFCLQTARAL 172
H N+ V+P+ G ++W D I A ++ P L + ++ F Q A
Sbjct: 250 HSENLTFVLPEEGGAIWVDYLTIGAKAK-------------EPDLAYAFLNFINQAEHAA 296
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
Q V A+P+ L LP E L K P A+ L EF +PLS
Sbjct: 297 QLAQYVY-YATPNLAAEKL--LPDEFLNDK--------VIYPDADSLKNSEFYKPLS 342
>gi|425738066|ref|ZP_18856334.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
gi|425480551|gb|EKU47716.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
Length = 357
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 40/176 (22%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G A PY +GTV I Y K K+ W DL +P+L I +V+S RE++G IA
Sbjct: 128 KGNRYAVPYFFGTVGILYDKDKYSD---MTFNSWNDLLKPQLKQDILLVDSAREIVG-IA 183
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGD----------VWVAVGWSSDVLPA 112
+ +N L LK +GD VAV WS +P
Sbjct: 184 LNMNHDSLNTTDPEKLKEAQLKLAKLAPNVKGVVGDELPLMLEQQEAHVAVVWSGVAMPI 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
V VVP+ G++LW D IP S+ V G H++I+F L+
Sbjct: 244 VTENDTYQYVVPQEGSNLWFDNMVIPKTSQ--------NVDG----AHRFIDFLLR 287
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 55/241 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP+ + + P+ WGT + Y ++ AP EDW+ LWR + L+ R++++N REVI
Sbjct: 132 DPKNRY-SIPFNWGTTGLIYNSEILKE---AP-EDWEYLWRNQKLLSKRMTLLNDVREVI 186
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G++ L + + A +A+ GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMCYSADA 246
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+K + V+P+SG+SLW D IP ++ + G + WI F LQ
Sbjct: 247 TKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWINFILQP 294
Query: 169 ARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A + + I + +A E +LP ++ + NL PP+ IL + E + P
Sbjct: 295 EVAATTSERLKISTPNNAAFE----QLPKQI-----KTNENL---YPPSSILDKCERISP 342
Query: 228 L 228
+
Sbjct: 343 V 343
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++W D AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWTDTLAIPKGAK 266
>gi|347736466|ref|ZP_08869099.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
gi|346920037|gb|EGY01308.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
Length = 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMV 64
E+DP G AA Y+WGTV I Y K + A I+ WK ++ PE A + I ++
Sbjct: 117 AEVDP-GNEYAAIYQWGTVGIGYNPDKVKAALGTATIDSWKQVFDPENAKKLASCGIVVL 175
Query: 65 NSPREVIGSIAVQLNLALLANQSAH-------------HLKAF--------GIGDVWVAV 103
+SP +++ S+ L L + +S ++K F GD VA+
Sbjct: 176 DSPADILPSVLNYLGLPPSSEKSDDVKKAGELMSSIRPYIKTFVPSVIDPLASGDACVAI 235
Query: 104 GWSSDVLPA-VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
G+S DVL A + V + +PK GA LW D AIPA + + L P +
Sbjct: 236 GYSGDVLQAQARSGGKVKIDYAIPKEGAQLWFDTLAIPAGAPNVAEAYAYINYMLDPKVM 295
Query: 160 QWIEFCLQTARALP 173
I + A A+P
Sbjct: 296 AGISNAVSYANAVP 309
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W+DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+L A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W+DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+L A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
QL A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 174
Query: 73 --------SIAVQLNLA--------------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S + Q + LLA + + + F D W+ WS D
Sbjct: 175 VGLKKNGFSNSTQNDAELKTAAADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+L A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+L A LLA + + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 95/245 (38%), Gaps = 49/245 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y + + I + DLW PEL +I +++ RE++G
Sbjct: 126 FDP-GNNYSVPYFWGTVGIIYNPTLLPEG--KEITGFNDLWDPELENKILLIDGAREILG 182
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDVL 110
L +L H +A +GD +AVGWS D
Sbjct: 183 MGLNSLGYSLNDTDEDHLQEALTKLKELTPNVKAIVGDENKMLMENNEAAIAVGWSGDAR 242
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ N+ VVP+ G++LW D + IP ++ V HQ+I F L
Sbjct: 243 DIMWENENIDYVVPEEGSNLWFDNFVIPKTAQ--------NVDA----AHQFINFMLDPE 290
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A E + ++P+ E LK P N P E+ R E E L
Sbjct: 291 VAAQ-NTEYVSYSTPNK----------EALKYMPEDMVNDERFYPEPELTERLEVYENLG 339
Query: 230 EATLS 234
+ L+
Sbjct: 340 KQHLA 344
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENKYSLV-YTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 73 ------------SIAVQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
+L A LLA + + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 61/247 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY+WGT I Y + + + ++ W +W PE G+I+M+N RE IG+
Sbjct: 137 DPENR-YSVPYQWGTTGILYNRKE-----IGEVDSWDAMWNPEFKGKIAMLNDVRETIGA 190
Query: 74 IAVQLNLALLAN------QSAHHLK-----------------AFGIGDVWVAVGWSSDVL 110
++L ++ + ++ LK A GD+ + +S D
Sbjct: 191 ALMRLGYSINSTDPDELAEAEESLKEQKPLLRGYFASTEVRPAVQNGDLLLGHVYSGDAF 250
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A+ ++ +PK GA+ W D AIP A ++ L H++I + L+
Sbjct: 251 LAMVENEELSYAIPKPGATRWTDNMAIPVGAPHVD-------------LAHEFINYILE- 296
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNL--IAGVPPA-EILARFEFL 225
P T P E P +D L + G P+ E+ R + +
Sbjct: 297 -----------PKVGAELSNYTYYNTPNE--AALPMIDEELRRLPGYTPSQEVFGRLQVI 343
Query: 226 EPLSEAT 232
E + EAT
Sbjct: 344 EDVGEAT 350
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 55/241 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP+ + + P+ WGT + Y ++ AP EDW+ LW+ + L+ RI+++N REVI
Sbjct: 132 DPKNRY-SIPFNWGTTGLIYNSEILKE---AP-EDWEYLWKNQKLLSKRITLLNDVREVI 186
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G++ L + + A +A+ GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMCYSADA 246
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+K + V+P+SG+SLW D IP ++ + G + WI F LQ
Sbjct: 247 TKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWINFILQP 294
Query: 169 ARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A + + I + +A E +LP ++ + NL PP+ IL + E + P
Sbjct: 295 EVAATTSERLKISTPNNAAFE----QLPKQI-----KTNENL---YPPSSILDKCERISP 342
Query: 228 L 228
+
Sbjct: 343 V 343
>gi|417005447|ref|ZP_11944040.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
gi|341577260|gb|EGS27668.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
Length = 357
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 98/243 (40%), Gaps = 55/243 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 73 ----SIAVQLNL--------------ALLANQS---AHHLKAFGIG-DVWVAVGWSS--- 107
S+ LN AL N A +K + I D + V +S
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQVDAAIGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L KH+ VVP G++LW D IP K + R + +I F ++
Sbjct: 242 EMLDGNKHLH--YVVPSEGSNLWFDNIVIP-------KTVKHRKEA-----YAFINFMME 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP ++ K A PP + + E
Sbjct: 288 PKNAAQ-NAEYIGYATPNLKAKAL--LPADIKNDK--------AFYPPDKTIDHLEVYNN 336
Query: 228 LSE 230
L +
Sbjct: 337 LGQ 339
>gi|408357686|ref|YP_006846217.1| spermidine/putrescine ABC transporter substrate-binding protein
[Amphibacillus xylanus NBRC 15112]
gi|407728457|dbj|BAM48455.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Amphibacillus xylanus NBRC 15112]
Length = 357
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 96/243 (39%), Gaps = 51/243 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
G + PY WGTV I + + W DLW P+L I +++ REVIG
Sbjct: 128 EGNKYSVPYFWGTVGILFNPELLPDKSFTS---WNDLWDPDLENGILLIDGAREVIGMGL 184
Query: 76 VQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPA 112
L +L H ++KA +GD V++ WS D
Sbjct: 185 NSLGYSLNDTNRDHLDEALEKLNTLTPNVKAI-VGDENKLLMANNEAAVSIAWSGDARDI 243
Query: 113 V-KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+ ++ + VVP+ G++LW D IP + + G HQ+I F L A
Sbjct: 244 MWENEALTYVVPEEGSNLWFDNMVIP--------KTADNIEG----AHQFINFMLDPEIA 291
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
E + ++P+ +S + LP E++ + PPAE+ R E E L
Sbjct: 292 -ALNTEYVSYSTPN--QSAIELLPEEMVGDE--------RFYPPAELTERLEVYENLGRE 340
Query: 232 TLS 234
LS
Sbjct: 341 MLS 343
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 30/154 (19%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DPRG+ Y WG I Y K K+ P W DLW P GR+ ++N REV
Sbjct: 124 QFDPRGEYSVV-YTWGMTGIIYNK----KYVKTPPTSWNDLWDPAYKGRVILLNDSREVF 178
Query: 72 GSIAVQLN-----------------------LALLANQSAHHLKAFGIGDVWVAVGWSSD 108
G +A++ N ++LA + + F + W+ WS D
Sbjct: 179 G-MALKKNGWSNNSTDPDQLAKAFQDLKELAPSVLAYDTDSLKQKFIAEEGWIGTMWSGD 237
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ + N+ V+PK G +WAD AIP ++
Sbjct: 238 ASFSYRENPNLGFVIPKEGTLVWADTLAIPKGAK 271
>gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
Length = 380
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 51/246 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI- 71
DP K + PY WG+ IA + K A + W DLW+PE GR+ ++N R+V
Sbjct: 149 FDPENKF-SIPYLWGSSGIAVNTKRIAK---ASLSSWNDLWKPEYEGRVMLMNDIRDVFT 204
Query: 72 ---------GSI--------AVQLNLALLANQSAHHLKA----FGIGDVWVAVGWSSDVL 110
GS A + L+ N + A F G+ ++ + W+ +V+
Sbjct: 205 MSLLTLGYNGSTKNPEAIKQAYEKLTKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVI 264
Query: 111 PAVKH-MSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A M + V PK GA +W D IP ++ H++I+F L+
Sbjct: 265 MAQDQGMPELDFVYPKEGAIMWMDNMVIPKNAKNNDNA------------HKFIDFILRP 312
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +E+ G SP+ E+ ++P P L N I PPA++L F E +
Sbjct: 313 KYAAMISEEIGYG-SPN--EAAKKEMP-------PELANNPIV-YPPADLLKHAMFREDV 361
Query: 229 SEATLS 234
+ ++
Sbjct: 362 GDEIMA 367
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 61/248 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPRE 69
DP+ + + PY WGT I Y K P W DL+ P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 70 VIGSIAVQL----------------NLAL-----LANQSAHHLKAFGI-GDVWVAVGWSS 107
IG+ L NL L LA + F + GD+ VA GWS
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYLARYDSETYDDFLLTGDLVVAHGWSG 236
Query: 108 DVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+ A N+ V+P+ G +WAD AI +S+ R+ L H +I+F L
Sbjct: 237 EFAKAHVENPNIRYVIPREGGVIWADNLAILKSSQ--------RID----LAHTFIDFLL 284
Query: 167 Q---TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
+ A+ + F + PS E+ + E++ N A PP EIL + E
Sbjct: 285 RPTINAKIVNFLR------YPSTNEAATAHILPEIV--------NDPAIYPPEEILEKLE 330
Query: 224 FLEPLSEA 231
++ + +A
Sbjct: 331 WIRDVGDA 338
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 57/244 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP+ + + P WGT Y + ++ P DW+ LW R +L+GR+++++ REV+
Sbjct: 145 DPQNR-HSIPMSWGTTGFVYNTQQLKE----PPTDWEYLWKNRQQLSGRMTLIDDVREVM 199
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L + + + +A+ GD+ +A+ +S+D
Sbjct: 200 GATLRMLGYSYNSKDESQIKQAYEKLRELKPSIAAFDTDAWRSQILAGDLVLAMAYSTDG 259
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ + N+ ++P SG SLW D AIP A L+ + W+ + L+
Sbjct: 260 IKISQENPNLRYIIPASGTSLWTDTIAIPKTAPNLDAA-------------YTWLNYNLE 306
Query: 168 -TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
T A +++ + + ALE +LP +L + DTNL PP +L + E +
Sbjct: 307 PTVAAEICQRQTVAIPNQVALE----QLPTQLRQ-----DTNLF---PPESVLNKCERIS 354
Query: 227 PLSE 230
PL +
Sbjct: 355 PLGD 358
>gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein [Geobacillus sp. Y412MC61]
gi|297531063|ref|YP_003672338.1| family 1 extracellular solute-binding protein [Geobacillus sp.
C56-T3]
gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein [Geobacillus sp. Y412MC52]
gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC61]
gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp.
C56-T3]
gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC52]
Length = 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + I W DLW P+L +I +V+ REV+G
Sbjct: 126 FDPHNR-YSVPYFWGTVGIVYNRDMLGGKT---ITSWNDLWNPDLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD + V WS D
Sbjct: 182 MALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAI-VGDEIKLLLANEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G H +I F L
Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEGA--------HAFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
A E + ++P+ + L LP ++ + P LD+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KKALAYLPKDIAGDRRFYPDLDS 327
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 38/166 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVN 65
+DP K A PY WGT I Y K + AP++ W +++PE ++S ++
Sbjct: 122 VDPENKF-AIPYLWGTTGIGYNPEKVKAALGENAPVDSWDLVFKPENLEKLSKCGVYFLD 180
Query: 66 SPREV-----------------------IGSIAVQLNLALLANQSAHHLKAFGIGDVWVA 102
+P EV + ++L + S+ ++ A GD+ VA
Sbjct: 181 TPTEVFPIVLNYLGKEPLSENSDDYTKIVQPFMLKLRPFITNFHSSEYINALANGDICVA 240
Query: 103 VGWSSDVLPAVKHM--SNVAV-----VPKSGASLWADLWAIPAASR 141
VGWS DVL A +N V VPK G +W D+ AIP ++
Sbjct: 241 VGWSGDVLQAADRAAEANKGVKVEYSVPKEGTIMWVDMMAIPKDAK 286
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 27/148 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+ + + PY WGT+ I Y K+K ++ W LW P+ G+I M++SPR+ IG
Sbjct: 120 KDQKYSVPYLWGTMGIVYNKTKVSDS----VDSWDILWNPKYEGQIIMLDSPRDTIGITL 175
Query: 76 VQLNLALLANQSAH-------------HLKAFGI---------GDVWVAVGWSSDVLPAV 113
+L +L A ++++ + G+ +++ WS D + +
Sbjct: 176 KKLGYSLNTKNPAELEEAKQALIEQKKLVRSYEVDTYKGQMIAGEAAMSLAWSGDAMLLM 235
Query: 114 KHMSNVAV-VPKSGASLWADLWAIPAAS 140
++A +PK G +LW D AIP +
Sbjct: 236 SENEDLAYAIPKEGTNLWFDCMAIPTTA 263
>gi|410453778|ref|ZP_11307722.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
gi|409932824|gb|EKN69780.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
bataviensis LMG 21833]
Length = 357
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 97/246 (39%), Gaps = 52/246 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y N I W DLW P L +I +++ REV+G
Sbjct: 126 FDP-GNKYSVPYFWGTVGIVYNPKML---NGKKITSWNDLWAPSLRNKILLIDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDVL 110
L +L + AH +KA +GD V + WS D
Sbjct: 182 MGLNSLGYSLNDTKKAHLIKAKEKLDTLTPNVKAIVGDEIKMLLANEEASVGLVWSGDAS 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ ++ VVPK G++LW D IP A +E H++I F L
Sbjct: 242 EIMSENEDLDYVVPKEGSNLWFDNMVIPKTAKNIEAA-------------HKFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A E + ++P+ + L +P E++K + P E+ + E E L
Sbjct: 289 KVAAQ-NTEYVGYSTPN--KQALKHMPKEVVKDE--------RFYPSPELTEKLEVYENL 337
Query: 229 SEATLS 234
+ L+
Sbjct: 338 GKRNLA 343
>gi|430751704|ref|YP_007214612.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
gi|430735669|gb|AGA59614.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
Length = 356
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 98/253 (38%), Gaps = 58/253 (22%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + + PY WGTV I Y F + P W LW P L I +V
Sbjct: 117 IDPRFMDMSYDPGNVYSVPYFWGTVGILYNPEAFDE----PPVSWDALWDPSLRNDILLV 172
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ RE+IG L +L H +A +GD A
Sbjct: 173 DGAREIIGMGLNSLGYSLNDTDEEHLQEALAKLKRLTPNVKAIVGDEIKMLMTGNEASAA 232
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V WS D + ++ VVP+ G++LW D IP +R + G H +
Sbjct: 233 VVWSGDAAEIMWENEDLDYVVPEEGSNLWFDSMVIPKTAR--------NIEG----AHLF 280
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I F L A E + ++P+A + L LP E+ + + P E++AR
Sbjct: 281 INFMLDPENAAR-NAEYVGYSTPNA--TALEMLPEEIREDE--------RFYPGDELIAR 329
Query: 222 FEFLEPLSEATLS 234
E E L + L+
Sbjct: 330 LEVYENLGKRMLA 342
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
L++N DP G+ Y WG I Y K + AP W+DLW P GR+ ++
Sbjct: 120 LKKN---TFDPNGEYSVV-YTWGMTGIIYNKKYVK---TAPTS-WQDLWNPVYKGRVILL 171
Query: 65 NSPREVIG------------SIAVQLNLAL----------LANQSAHHLKAFGIGDVWVA 102
N REVIG + Q+++A LA + + F + W+
Sbjct: 172 NDSREVIGMALKKHGFSNNATDPGQIDIAFKDLKTLAPNVLAYDTDSIKQKFIAEEAWIG 231
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ WS D +V V+PK G ++WAD AIP ++
Sbjct: 232 MMWSGDAHFVHNDNPDVGFVIPKEGTTVWADTLAIPKGAK 271
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGT+ I Y K+K + E W DLW L I +++ RE++G
Sbjct: 125 FDPKNE-YSIPYFWGTLGILYDKTKVPED--LKFEKWNDLWDARLENNILLIDGAREMMG 181
Query: 73 ------------SIAVQLNLALLANQSAH-HLKAFG---------IGDVWVAVGWSSDVL 110
+ V LNLA + H ++KA + WV+V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAEKKLELLHPNIKAINSDEKKMLMINNEAWVSVVFSGDAK 241
Query: 111 PAVKHMSN-VAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N V +PK G +LW D IP S+ E +++I F L+
Sbjct: 242 SIMEENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFINFMLKPE 289
Query: 170 RALPFKQEVIPGASPSA 186
A E I A+P+
Sbjct: 290 NAAK-NSEFIGYATPNG 305
>gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|420263774|ref|ZP_14766410.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|394769216|gb|EJF49079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GEITQWDDLWKPELANSIMLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L + +AF + D VA
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEEASVA 233
Query: 103 VGWS---SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
V +S +D++ +H+ V+P G++LW D IP S+ E
Sbjct: 234 VTFSGEAADMMYENEHIH--YVIPSEGSNLWFDNMVIPKTSQNE 275
>gi|411118601|ref|ZP_11390982.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410712325|gb|EKQ69831.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 375
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 56/250 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 71
DP G + P WGT + Y N P EDW+DLW+ P+L ++++++ REVI
Sbjct: 144 DP-GNRHSVPISWGTTGLIYNTEAL---NPGP-EDWQDLWQMQPQLNRKMTLLSDVREVI 198
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L + + + +A+ +GD+ +++ +S+D
Sbjct: 199 GASLKSLGYSYNSTNPSEIKRAYEKLVQLKPAIATFTTDAWRDRLLVGDLLLSMAYSADA 258
Query: 110 LPAVKHMSNVA---VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+ ++ + V+PKSG SLW+D IP S + WI F +
Sbjct: 259 VRLIQENPDTKLRYVIPKSGTSLWSDAMVIPTTSPNPDAA------------YAWINFMM 306
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
Q + A+ Q + A+P+ ++ +LP L + + PP EI+ E +
Sbjct: 307 QPSVAVDVTQRLF-FATPN--QAAYDQLPAPLRNNR--------SLFPPEEIIKACERII 355
Query: 227 PLSEATLSDM 236
PL EA ++++
Sbjct: 356 PL-EAKVTEL 364
>gi|138894300|ref|YP_001124753.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus thermodenitrificans NG80-2]
gi|196248099|ref|ZP_03146801.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
gi|134265813|gb|ABO66008.1| Spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Geobacillus thermodenitrificans NG80-2]
gi|196212883|gb|EDY07640.1| extracellular solute-binding protein family 1 [Geobacillus sp.
G11MC16]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + I DW DLW P L +I +V+ REV+G
Sbjct: 126 FDPHNR-YSVPYFWGTVGIVYNREMLGGKT---ITDWNDLWDPSLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG-------------IGD----------VWVAVGWSSDV 109
L + L + + HHL+ +GD + V WS D
Sbjct: 182 MALNSLGYS-LNDTNKHHLREAKQKLDRLMPNVKAIVGDEIKLLLVNEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP + K I G H +I F L
Sbjct: 241 AEIIAENDKLDYVVPEEGSNLWFDNMVIPKTA----KNIEG--------AHAFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
A E + ++P+ ++ L LP ++ + P LD+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KAALRYLPKDVANDQRFYPDLDS 327
>gi|403383481|ref|ZP_10925538.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC30]
Length = 358
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 37/172 (21%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLAL 82
PY WGTV + Y +K W LW P L G++ +V+S REV+G +NL+L
Sbjct: 135 PYFWGTVGVVYNPKMLQKD--LDFSSWDQLWDPSLKGKVLLVDSAREVMGMSLNSMNLSL 192
Query: 83 LANQSAHHLKAFG----------------------IGDVWVAVGWSSDVLPAVKHMSNVA 120
+ S KA GD VA+ WS + ++
Sbjct: 193 NSKDSNELNKATDKLIDLSPNVKAVIGDEVTQLMVNGDASVALTWSGQAADMMYDNEDLT 252
Query: 121 -VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
VPK G++LW D IP S+ V G H+++ F L A
Sbjct: 253 YAVPKEGSNLWFDNMVIPKTSK--------NVEG----AHKFMNFMLDPENA 292
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 52/240 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP GK + PY WG++ I Y K+K + P++ W LW + G I M++S R+ I
Sbjct: 128 DPNGK-YSVPYLWGSLGILYNKTKVTE----PVDSWNILWNEKYKGDIVMLDSSRDTIAV 182
Query: 74 IAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVLP 111
++L ++ KA G++ + V W+ D +
Sbjct: 183 ALLKLGYSINTQNEEELQKAKEELIKQKPLVRSYEVDNYKNSMASGELAMVVTWAGDAMN 242
Query: 112 AVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
+ ++ +PK G +LW D AIP S+ +T+ Q+I F L
Sbjct: 243 LMAENEDLEYALPKEGTNLWFDAIAIPVTSKHKTEA------------EQFINFML---- 286
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF----EFLE 226
K E+ S ST K ELL + + N+ P +E+ F EF E
Sbjct: 287 ----KPEIAAKNSAYIKYSTTNKDALELLPEEEVTNPNMYPTQPLSELGEVFVDLGEFTE 342
>gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
Length = 344
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S+ +T L H++I F Q+
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKT------------LAHKFINFMYQSE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + KLP EL + P +E + + EF+ +
Sbjct: 279 N----QAEIVTSLGYASATNAGRDKLPEELKNNRTIF--------PSSEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GAETLA 332
>gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GEITQWDDLWKPELANSIMLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L + +AF + D VA
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEEASVA 233
Query: 103 VGWS---SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
V +S +D++ +H+ V+P G++LW D IP S+ E
Sbjct: 234 VTFSGEAADMMYENEHIH--YVIPSEGSNLWFDNMVIPKTSQNE 275
>gi|375007599|ref|YP_004981232.1| spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286448|gb|AEV18132.1| Spermidine/putrescine-binding periplasmic protein [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 47/222 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + I W DLW P L +I +V+ REV+G
Sbjct: 126 FDPHNR-YSVPYFWGTVGIVYNREMLGGKT---ITSWNDLWDPNLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD + V WS D
Sbjct: 182 MALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAI-VGDEIKLLLANEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G H +I F L
Sbjct: 241 AEIISENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEGA--------HAFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
A E + ++P+ + L LP ++ + P LD+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KKALAYLPKDIAGDRRFYPDLDS 327
>gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GVITQWDDLWKPELANSIMLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L + +AF + D VA
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEEASVA 233
Query: 103 VGWS---SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLET 144
V +S +D++ +H+ V+P G++LW D IP S+ E+
Sbjct: 234 VTFSGEAADMMYENEHIH--YVIPSEGSNLWFDNMVIPKTSQNES 276
>gi|387142714|ref|YP_005731107.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
gi|269940597|emb|CBI48976.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|21282714|ref|NP_645802.1| hypothetical protein MW0985 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485940|ref|YP_043161.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651711|ref|YP_185975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus aureus subsp. aureus COL]
gi|87160442|ref|YP_493700.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194801|ref|YP_499598.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221180|ref|YP_001332002.1| spermidine/putrescine ABC transporter binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509283|ref|YP_001574942.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140498|ref|ZP_03564991.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451951|ref|ZP_05699967.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|262048688|ref|ZP_06021570.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|262052208|ref|ZP_06024414.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|282925286|ref|ZP_06332943.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|284024027|ref|ZP_06378425.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus 132]
gi|294848091|ref|ZP_06788838.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|297208260|ref|ZP_06924690.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300912337|ref|ZP_07129780.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|304381340|ref|ZP_07363993.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014295|ref|YP_005290531.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus VC40]
gi|384861697|ref|YP_005744417.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|384869635|ref|YP_005752349.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|415689676|ref|ZP_11452904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|417648467|ref|ZP_12298291.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|418276767|ref|ZP_12891604.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|418284909|ref|ZP_12897612.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|418312572|ref|ZP_12924081.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|418318061|ref|ZP_12929476.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|418571242|ref|ZP_13135481.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|418578933|ref|ZP_13143028.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418642691|ref|ZP_13204877.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|418644664|ref|ZP_13206804.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|418647730|ref|ZP_13209793.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649611|ref|ZP_13211639.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|418660329|ref|ZP_13221959.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|418872027|ref|ZP_13426385.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|418903312|ref|ZP_13457353.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418906039|ref|ZP_13460066.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418925272|ref|ZP_13479175.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928359|ref|ZP_13482245.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418933937|ref|ZP_13487761.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418949006|ref|ZP_13501278.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|418954507|ref|ZP_13506467.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|418987924|ref|ZP_13535597.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|419775168|ref|ZP_14301110.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|421150743|ref|ZP_15610397.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|422743508|ref|ZP_16797492.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|424784929|ref|ZP_18211732.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|440705897|ref|ZP_20886649.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|440734550|ref|ZP_20914162.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|443640501|ref|ZP_21124490.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|448742029|ref|ZP_21723984.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|448744664|ref|ZP_21726548.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
gi|21204152|dbj|BAB94850.1| potD [Staphylococcus aureus subsp. aureus MW2]
gi|49244383|emb|CAG42811.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285897|gb|AAW37991.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus COL]
gi|87126416|gb|ABD20930.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87202359|gb|ABD30169.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150373980|dbj|BAF67240.1| spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368092|gb|ABX29063.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860166|gb|EEV82998.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|259159879|gb|EEW44917.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|259163144|gb|EEW47704.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|282592562|gb|EFB97572.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|294824891|gb|EFG41313.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|296886999|gb|EFH25902.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300886583|gb|EFK81785.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|302750926|gb|ADL65103.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340323|gb|EFM06264.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315196132|gb|EFU26489.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|320143139|gb|EFW34929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313770|gb|AEB88183.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|329730735|gb|EGG67114.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|365172308|gb|EHM63035.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|365174045|gb|EHM64445.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|365238217|gb|EHM79054.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|365244753|gb|EHM85410.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|371980946|gb|EHO98143.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|374362992|gb|AEZ37097.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus VC40]
gi|375015804|gb|EHS09448.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|375025067|gb|EHS18477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|375029440|gb|EHS22768.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|375029984|gb|EHS23309.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|375032397|gb|EHS25641.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|375367622|gb|EHS71571.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|375370148|gb|EHS73980.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|375372737|gb|EHS76462.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|377696960|gb|EHT21315.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377719712|gb|EHT43882.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377738271|gb|EHT62280.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742327|gb|EHT66312.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746567|gb|EHT70538.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377765339|gb|EHT89189.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377771717|gb|EHT95471.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|383970852|gb|EID86942.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|394329231|gb|EJE55346.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|421956339|gb|EKU08668.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|436431578|gb|ELP28931.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436507663|gb|ELP43332.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|443405182|gb|ELS63792.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|445547248|gb|ELY15519.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|445561970|gb|ELY18155.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|253731713|ref|ZP_04865878.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733663|ref|ZP_04867828.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|417655595|ref|ZP_12305305.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|417899575|ref|ZP_12543477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|417901564|ref|ZP_12545440.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|418598462|ref|ZP_13161972.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
gi|253724527|gb|EES93256.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728363|gb|EES97092.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|329728813|gb|EGG65234.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|341844503|gb|EGS85715.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|341845403|gb|EGS86605.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|374399819|gb|EHQ70955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|423721323|ref|ZP_17695505.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
gi|383365694|gb|EID42987.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
Length = 357
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 85/214 (39%), Gaps = 44/214 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I W DLW +L +I +V+ REVIG
Sbjct: 126 FDP-GNKYSVPYFWGTVGIVYNPEMIGGK---KITSWNDLWDKDLRNQILLVDGAREVIG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L+ +L H ++KA +GD + V WS D
Sbjct: 182 MGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI-VGDEIKMLLVNEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G HQ+I F L
Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEGA--------HQFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E + ++P+ E L LP E+ + K
Sbjct: 289 KNAAQ-NAEYVGYSTPN--EKALDYLPKEVTEDK 319
>gi|422745667|ref|ZP_16799606.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141082|gb|EFW32929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|312112389|ref|YP_003990705.1| family 1 extracellular solute-binding protein [Geobacillus sp.
Y4.1MC1]
gi|336236840|ref|YP_004589456.1| family 1 extracellular solute-binding protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217490|gb|ADP76094.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y4.1MC1]
gi|335363695|gb|AEH49375.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 85/214 (39%), Gaps = 44/214 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I W DLW +L +I +V+ REVIG
Sbjct: 126 FDP-GNKYSVPYFWGTVGIVYNPEMIGGK---KITSWNDLWDKDLRNQILLVDGAREVIG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L+ +L H ++KA +GD + V WS D
Sbjct: 182 MGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI-VGDEIKMLLVNEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G HQ+I F L
Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEGA--------HQFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E + ++P+ E L LP E+ + K
Sbjct: 289 KNAAQ-NAEYVGYSTPN--EKALDYLPKEVTEDK 319
>gi|418911709|ref|ZP_13465692.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377725087|gb|EHT49202.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|55823439|ref|YP_141880.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
gi|55739424|gb|AAV63065.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
Length = 356
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 88/213 (41%), Gaps = 43/213 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGTV I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 126 FDPN-KDYSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 180
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 181 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 241 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E I A+P+ TL LP + K
Sbjct: 289 NAAQ-NAEYIGYATPNEAAKTL--LPKSITNDK 318
>gi|418316622|ref|ZP_12928059.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
gi|365240901|gb|EHM81660.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|422845339|ref|ZP_16892049.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 360
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G V +
Sbjct: 135 SVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGY 191
Query: 81 ALLANQSAH---------------------HLKAFGI-GDVWVAVGWSSDVLPAVKHMSN 118
++ SAH LK + + + W+ V +S + + S+
Sbjct: 192 SMNDTNSAHLKVAKAKLDKIGKNVKAIVADELKMYMVQNEAWIGVTYSGEAATMMDQDSH 251
Query: 119 V-AVVPKSGASLWADLWAIP 137
+ VVP G++LW D IP
Sbjct: 252 IHYVVPAQGSNLWFDNIVIP 271
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP K Y WG IAY K K+ P W DLW P+ GR+ ++N RE +G
Sbjct: 122 DPDNKYSVV-YTWGVTGIAYNK----KYVTEPPTSWSDLWNPKYKGRVVVLNDSREALGM 176
Query: 73 ----------SIA-VQLNLA----------LLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
+I+ +L++A LLA + + F + W+ WS D
Sbjct: 177 SLKKNGFSNSTISEKELDIANADLKKLLPNLLAFDTDTIKQKFIAEEAWIGTVWSGDAAF 236
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+++ VVPK G +++AD +AIP ++
Sbjct: 237 IYPENNDIGYVVPKEGGTIFADTFAIPKGAK 267
>gi|239825895|ref|YP_002948519.1| family 1 extracellular solute-binding protein [Geobacillus sp.
WCH70]
gi|239806188|gb|ACS23253.1| extracellular solute-binding protein family 1 [Geobacillus sp.
WCH70]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 85/214 (39%), Gaps = 44/214 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I W DLW +L +I +V+ REVIG
Sbjct: 126 FDP-GNKYSVPYFWGTVGIVYNPEMLGGK---KITSWNDLWDKDLRNQILLVDGAREVIG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L+ +L H ++KA +GD + V WS D
Sbjct: 182 MGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAI-VGDEIKMLLVNEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G HQ+I F L
Sbjct: 241 AGIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEGA--------HQFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E + ++P+ E L LP E+ + K
Sbjct: 289 KNAAQ-NAEYVGYSTPN--EKALDYLPKEVTEDK 319
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 51/246 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WG+ IA KS+ ++ I W DLWRPE GR+ ++N R+V
Sbjct: 143 FDPQNKF-SVPYLWGSSGIAVNKSRI---DINSITSWNDLWRPEFEGRVMLMNDLRDVFT 198
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGI---------GDVWVAVGWSSDVL 110
+ L + H +++ F G+ ++ + W+ +V+
Sbjct: 199 MGLLTLGYPATTHDPKHIEAAYQKLSKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVI 258
Query: 111 PAVKH-MSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A M + V PK G +W D +IP ++ + +I++ L+
Sbjct: 259 MAQDQGMPELDFVYPKEGVIMWMDNMSIPKNAKNRENA------------YAFIDYLLRP 306
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +E+ G SP+ ES +P ++ + +I PP ++L F E +
Sbjct: 307 DNAAIISEEIGYG-SPN--ESAKKLMPADIANNQ------II--YPPDDLLGHALFREDV 355
Query: 229 SEATLS 234
+ T++
Sbjct: 356 GDTTMA 361
>gi|445381416|ref|ZP_21427083.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
gi|445394349|ref|ZP_21428817.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444748944|gb|ELW73887.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444749052|gb|ELW73987.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
Length = 355
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWS---S 107
S+ LN +L N A +K + I GD + V +S S
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 239
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L K + VVP G++LW D IP + E + + +I F L+
Sbjct: 240 EMLDKNKDLR--YVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLK 285
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E I A+P+ TL LP + K
Sbjct: 286 PENAAQ-NAEYIGYATPNEAAKTL--LPKSITNDK 317
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGTV + Y + ++ P++ W+ LW + AG+I M++S R+ I
Sbjct: 120 DFDPSNE-YSVPYMWGTVGLLYDTTVVKE----PVDSWELLWDEKYAGQILMMDSQRDSI 174
Query: 72 GSIAVQLNLAL---------LANQS------------AHHLKAFGI-GDVWVAVGWSSDV 109
G +L ++ LA Q +K I G+ +A+ WS D
Sbjct: 175 GITLKKLGFSVNSRDSKELELAKQELIRQKPLVMAYVVDEVKDMMIGGEAAIAIAWSGDA 234
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASR---LETKQIGGRVRGLSPLIH-QWIEF 164
+ + +A VVPK G++LW D IP +++ L K I R L + ++IE+
Sbjct: 235 MLMMGQNEKLAYVVPKEGSNLWFDNMVIPKSAKNKELAEKFINFMTRPEISLKNVEYIEY 294
Query: 165 CLQTARALPFKQEVI---PGASPS 185
+ E + P A PS
Sbjct: 295 STPNTGTMELLDEELLNNPVAYPS 318
>gi|403667759|ref|ZP_10933059.1| spermidine/putrescine-binding periplasmic protein [Kurthia sp.
JC8E]
Length = 358
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+ + PY WGTV I Y + K W LW P L G++ +V+S REV+G
Sbjct: 128 KNNSYSIPYFWGTVGIVYNEKMLTKK--LDFTSWDQLWDPSLKGKVLLVDSAREVLGMSL 185
Query: 76 VQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDVLPAV 113
+N++L S KA GD VA+ WS +
Sbjct: 186 NSMNMSLNETDSTKLQKATDKLIDLSPNVQAVIGDEVTQLMVNGDAPVALTWSGQAADMM 245
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
++ VP G++LW D IP S K + G H++I F L A
Sbjct: 246 YDNEDLTYTVPDEGSNLWFDNMVIPKTS----KNVDGA--------HKFINFMLDPENA 292
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 54/246 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWS---S 107
L +L + AF + D VAV +S +
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANEEASVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
D++ +H+ V+P G++LW D IP S+ E + ++ F L+
Sbjct: 242 DMMYENEHIH--YVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAFLNFMLE 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I ++P+ + L LP E+ + K P E++ E E
Sbjct: 288 PENAAQ-NAEYIGYSTPN--KKALALLPDEITQDKQF--------YPSDELMKHLEVYEN 336
Query: 228 LSEATL 233
L L
Sbjct: 337 LGAQYL 342
>gi|56419261|ref|YP_146579.1| spermidine/putrescine ABC transporter substrate-binding protein
[Geobacillus kaustophilus HTA426]
gi|56379103|dbj|BAD75011.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Geobacillus kaustophilus HTA426]
Length = 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 47/222 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + I W DLW P L +I +V+ REV+G
Sbjct: 126 FDPHNR-YSVPYFWGTVGIVYNREMLGGKT---ITSWNDLWEPSLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD + V WS D
Sbjct: 182 MALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAI-VGDEIKLLLANEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G H +I F L
Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEG--------AHAFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
A E + ++P+ + L LP ++ + P LD+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--RAALRYLPKDIAGDRRFYPDLDS 327
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K I G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+ E + LP E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 54/246 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWS---S 107
L +L + AF + D VAV +S +
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANEEASVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
D++ +H+ V+P G++LW D IP S+ E + ++ F L+
Sbjct: 242 DMMYENEHIH--YVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAFLNFMLE 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I ++P+ + L LP E+ + K P E++ E E
Sbjct: 288 PENAAQ-NAEYIGYSTPN--KKALALLPDEITQDKQF--------YPSDELMKHLEVYEN 336
Query: 228 LSEATL 233
L L
Sbjct: 337 LGAQYL 342
>gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815365|ref|YP_005851756.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035487|ref|ZP_12673944.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690476|gb|EHE90424.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 360
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G V +
Sbjct: 135 SVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGY 191
Query: 81 ALLANQSAH---------------------HLKAFGI-GDVWVAVGWSSDVLPAVKHMSN 118
++ SAH LK + + + W+ V +S + + S+
Sbjct: 192 SMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQNEAWIGVTYSGEAAMMMDQDSH 251
Query: 119 V-AVVPKSGASLWADLWAIP 137
+ VVP G++LW D IP
Sbjct: 252 IHYVVPAQGSNLWFDNIVIP 271
>gi|417891784|ref|ZP_12535841.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
gi|341851070|gb|EGS91999.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
Length = 357
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVFWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKQMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K I G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+ E + LP E+
Sbjct: 295 AEYVGYATPN--EKAVQLLPKEI 315
>gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
Length = 357
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 51/218 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F N + W L+ PEL +I ++
Sbjct: 117 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWV 101
+ REV+G L +L AH ++KA +GD V
Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGV 232
Query: 102 AVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
AV +S + + ++ V+PK G++LW D IP + K + G H+
Sbjct: 233 AVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HK 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGEL 198
+I F L+ A E + A+P+A L LP E+
Sbjct: 281 FINFMLKPENA-AINAEYVGYATPNAKAVQL--LPKEI 315
>gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 360
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G V +
Sbjct: 135 SVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGY 191
Query: 81 ALLANQSAH---------------------HLKAFGI-GDVWVAVGWSSDVLPAVKHMSN 118
++ SAH LK + + + W+ V +S + + S+
Sbjct: 192 SMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQNEAWIGVTYSGEAAMMMDQDSH 251
Query: 119 V-AVVPKSGASLWADLWAIP 137
+ VVP G++LW D IP
Sbjct: 252 IHYVVPAQGSNLWFDNIVIP 271
>gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein
[Streptococcus thermophilus LMG 18311]
gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus LMG 18311]
Length = 356
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 87/213 (40%), Gaps = 43/213 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 126 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 180
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 181 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 241 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E I A+P+ TL LP + K
Sbjct: 289 NAAQ-NAEYIGYATPNEAAKTL--LPKSITNDK 318
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 62 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 118
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 119 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 177
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 178 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 224
Query: 176 QEVIPGASPSA 186
E + A+P+A
Sbjct: 225 AEYVGYATPNA 235
>gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386087136|ref|YP_006003010.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|386345215|ref|YP_006041379.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387910236|ref|YP_006340542.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|339278676|emb|CCC20424.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387575171|gb|AFJ83877.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
Length = 355
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 87/213 (40%), Gaps = 43/213 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 287
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
A E I A+P+ TL LP + K
Sbjct: 288 NAAQ-NAEYIGYATPNEAAKTL--LPKSITNDK 317
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 103/246 (41%), Gaps = 59/246 (23%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 69
E DP G + P+ WGT + Y ++ P +DW+ LW + EL+ R++++N RE
Sbjct: 145 EYDP-GNRYSVPFTWGTTGLIYNSARLS----TPPDDWEYLWTHQSELSRRLTLMNDVRE 199
Query: 70 VIGSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSS 107
V+G+ L + + A A+ GD+ VA+G+S
Sbjct: 200 VMGAGLRSLGYSYNSTDPAQLRAAYEHLVNLKPALANFTTDGWRDLILAGDLEVAMGFSF 259
Query: 108 DVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
D L ++ VVP SG+SLW D IP + V+G + WI F
Sbjct: 260 DALSVSDENPDLEYVVPMSGSSLWTDTMVIP--------RNAPNVQG----AYAWINFMF 307
Query: 167 Q---TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
Q TA + E + A+P+ L+ + L+ P+L P +L R E
Sbjct: 308 QPQVTADLI----ERLYFATPNRAAYNLLS---QELRENPTL-------FPSESVLERCE 353
Query: 224 FLEPLS 229
+ PLS
Sbjct: 354 GILPLS 359
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSA 186
E + A+P+A
Sbjct: 295 AEYVGYATPNA 305
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSA 186
E + A+P+A
Sbjct: 295 AEYVGYATPNA 305
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 71 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 127
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 128 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 186
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 187 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 233
Query: 176 QEVIPGASPSA 186
E + A+P+A
Sbjct: 234 AEYVGYATPNA 244
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 55/243 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 71
DP G + P WGT + Y KS + AP DW LW +L R++++N REV+
Sbjct: 157 DP-GNSYSIPISWGTTGLIYNKSALDE---APT-DWNYLWDNADKLQRRMTLLNDVREVL 211
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L + + + A A+ GD+ VA+ +SSD
Sbjct: 212 GASLKSLGYSYNSTEEAQVKAAYERLVELRPAIASFNSDAWRTQILSGDLLVAMCYSSDA 271
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ N A VVP SG+S+WAD IP R P + W+ F ++
Sbjct: 272 NEITEEDDNFAYVVPSSGSSVWADTLVIP------------RTAPNVPGAYAWMSFMMRA 319
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPG-ELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
+ Q + A+P+ PG ELL + NL P +E + R E L+P
Sbjct: 320 QVSAEITQR-LSFATPNR--------PGYELLPEDVRTNPNLF---PSSETIDRCEGLKP 367
Query: 228 LSE 230
L E
Sbjct: 368 LGE 370
>gi|333367327|ref|ZP_08459603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
Length = 386
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 55/250 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV 70
E DP K + PY WG+ IA + +L+ I W DLW P+ GR+ ++N R+V
Sbjct: 153 AEFDPENK-YSVPYLWGSSGIAVNTKRI---DLSSINSWDDLWLPQYKGRVMLMNDLRDV 208
Query: 71 IGSIAVQLNLALLANQSAHHLKA-----------------------FGIGDVWVAVGWSS 107
+ L + Q +H+KA F G+ ++ + W+
Sbjct: 209 FSMSLLTLGYP-TSTQDPNHIKAAYEKLATLMPNVRTFNSDAPRMPFMEGETYLGLAWNG 267
Query: 108 DVLPAVKH-MSNVAVV-PKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEF 164
+V+ A M + V PK G +W D AIP A LE + +I+F
Sbjct: 268 EVIMAQDQGMPELDFVYPKEGVIMWMDNMAIPKNAKNLENA-------------YTFIDF 314
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEF 224
++ + +E+ G SPS L+ P + N I PPA+ + F
Sbjct: 315 LMRPENSAIISEEIGYG-SPSDAARALM---------PPKMANNEII-YPPADKMGHALF 363
Query: 225 LEPLSEATLS 234
+ + T++
Sbjct: 364 RRDVGDKTMA 373
>gi|347548214|ref|YP_004854542.1| putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346981285|emb|CBW85222.1| Putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 357
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 54/233 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F N + W L+ P+L +I ++
Sbjct: 117 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L AH ++A +GD VA
Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAVVGDEIKLLMADNEAGVA 233
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V +S + + ++ V+PK G++LW D IP + K + G H++
Sbjct: 234 VTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVNGA--------HKF 281
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLD--TNL 209
I F L+ A E + A+P+ E + LP E+ + P++D TNL
Sbjct: 282 INFMLKPENA-AINAEYVGYATPN--EKAVKLLPKEISSDERFYPNMDELTNL 331
>gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
Length = 344
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + PY WG I+Y +S + P++ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVKKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKKNGHSVNTKDEAEIEQAFDSLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S+ + L H++I F Q+
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA------------LAHKFINFMYQSE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + KLP EL + P +E + + EF+ +
Sbjct: 279 N----QAEIVTSLGYASATNAGRDKLPEELKNNRTIF--------PSSEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GAETLA 332
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y K+K E W DLW L I +++ RE++G
Sbjct: 125 FDPNNE-YSVPYFWGTLGIVYNKTKVPSD--LKFEKWDDLWDARLENNILLIDGAREMMG 181
Query: 73 ------------SIAVQLNLA-----LLANQ----SAHHLKAFGIGD-VWVAVGWSSDVL 110
+ V LNLA LL +A K I + WV+V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAEKKLELLHKNVKAINADEKKMLMINNEAWVSVVFSGDAS 241
Query: 111 PAVKHMSN-VAVVPKSGASLWADLWAIPAASRLE 143
+ N V VPK G +LW D IP S+ E
Sbjct: 242 AIMTENENMVYSVPKEGTNLWFDNIVIPKTSKNE 275
>gi|418993721|ref|ZP_13541358.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377746880|gb|EHT70850.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 357
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 31/143 (21%)
Query: 24 YRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLALL 83
Y WG IAY K ++ P W DLW GR+ M+N PREV+G ++ +
Sbjct: 133 YTWGITGIAYNKKYVKE---TPTS-WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 188
Query: 84 ANQSAHHLKAFG----------------------IGDVWVAVGWSSDVLPAVKHMSN--- 118
+ K+F + W+ WS D A H N
Sbjct: 189 TTNTEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDA--AFIHAQNPDV 246
Query: 119 VAVVPKSGASLWADLWAIPAASR 141
V+PK GA++WAD AIP ++
Sbjct: 247 EYVIPKEGATIWADTLAIPKGAK 269
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPNKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+ E + LP E+
Sbjct: 295 AEYVGYATPN--EKAVQLLPKEI 315
>gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
Length = 347
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y +K K N I+ W LW P+ +I MV+S R+ I
Sbjct: 120 FDPKNE-YSVPYMWGTVGIIYN-TKLIKDN---IDSWDALWNPKYKEQILMVDSQRDAIA 174
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGDVW----------VAVGWSSDVL 110
+L ++ + KA +GD +AV WS D +
Sbjct: 175 VALKRLGYSMNTTNKSQLEKAKQELIKQKPFVHAYVGDEVKDLMTDEEGAIAVVWSGDAV 234
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+K+ N+ V+PK G++LW D IP ++
Sbjct: 235 TMMKNNKNLKYVIPKEGSNLWFDNMVIPKGTK 266
>gi|295702413|ref|YP_003595488.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
megaterium DSM 319]
gi|294800072|gb|ADF37138.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus
megaterium DSM 319]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 44/210 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I+ W DLW P+L +I + + REV+G
Sbjct: 126 FDP-GNKYSIPYFWGTVGIVYNSDMIHG---KKIKSWNDLWDPKLKNQILLADGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
LN +L AH ++KA +GD V V WS D
Sbjct: 182 MGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKAI-VGDEIKMLLANEEAAVGVVWSGDA 240
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP ++ V G H+++ F L
Sbjct: 241 SEIMSENDKLNYVVPEEGSNLWFDNMVIPKTAK--------NVEG----AHKFMNFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGEL 198
A E + ++P+ + L LP E+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KKALDYLPKEV 315
>gi|418602598|ref|ZP_13165997.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
gi|374394945|gb|EHQ66220.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMILEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|258423602|ref|ZP_05686492.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|418308093|ref|ZP_12919750.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|418559168|ref|ZP_13123714.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|418888895|ref|ZP_13443031.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|257846303|gb|EEV70327.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|365241826|gb|EHM82560.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|371975459|gb|EHO92753.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|377754405|gb|EHT78314.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|386830638|ref|YP_006237292.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417798993|ref|ZP_12446145.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|418655576|ref|ZP_13217427.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|334274885|gb|EGL93191.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|375036327|gb|EHS29402.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|385196030|emb|CCG15647.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|387602375|ref|YP_005733896.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|404478439|ref|YP_006709869.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
gi|418309901|ref|ZP_12921452.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|283470313|emb|CAQ49524.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|365238024|gb|EHM78863.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|404439928|gb|AFR73121.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 44/172 (25%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS----- 62
A +DP + PY WGT I Y +K ++ AP++ W +++PE ++S
Sbjct: 120 ADTVDPDNAY-SVPYLWGTTGIGYNVAKVKEVLGEDAPVDSWDLVFKPENMEKLSKCGVG 178
Query: 63 MVNSPREVIGSIAVQLN------------------LALLAN--------QSAHHLKAFGI 96
+N+P E++ A LN LALL S+ ++
Sbjct: 179 FLNAPTEIM---AAALNYIGKDPNSTDPNAYKKDALALLKQVRPYVTYFHSSQYINDLAN 235
Query: 97 GDVWVAVGWSSDVLPAVKHMS------NVAV-VPKSGASLWADLWAIPAASR 141
GDV VA+GWS DVL A + VA +PK GA W DL AIP ++
Sbjct: 236 GDVCVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAWFDLMAIPKEAK 287
>gi|49483265|ref|YP_040489.1| ABC transporter [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425154|ref|ZP_05601580.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257430452|ref|ZP_05606834.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433154|ref|ZP_05609512.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257436053|ref|ZP_05612100.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282903651|ref|ZP_06311539.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|282905420|ref|ZP_06313275.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282908392|ref|ZP_06316223.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910679|ref|ZP_06318482.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913877|ref|ZP_06321664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282923923|ref|ZP_06331599.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|283957846|ref|ZP_06375297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293500914|ref|ZP_06666765.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|293509870|ref|ZP_06668579.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|293526456|ref|ZP_06671141.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|295427590|ref|ZP_06820222.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591456|ref|ZP_06950094.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|379020809|ref|YP_005297471.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|384547288|ref|YP_005736541.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|384868016|ref|YP_005748212.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415684381|ref|ZP_11449510.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|417889005|ref|ZP_12533104.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|417904216|ref|ZP_12548046.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|418566398|ref|ZP_13130779.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|418581739|ref|ZP_13145819.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418597618|ref|ZP_13161142.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|418891655|ref|ZP_13445772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418897429|ref|ZP_13451502.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900317|ref|ZP_13454375.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418908809|ref|ZP_13462814.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418916893|ref|ZP_13470852.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418922681|ref|ZP_13476598.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418950472|ref|ZP_13502646.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|418981932|ref|ZP_13529644.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985473|ref|ZP_13533161.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|49241394|emb|CAG40078.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272130|gb|EEV04262.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257278580|gb|EEV09199.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281247|gb|EEV11384.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257284335|gb|EEV14455.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282313895|gb|EFB44287.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|282321945|gb|EFB52269.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282325284|gb|EFB55593.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282328057|gb|EFB58339.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282330712|gb|EFB60226.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282595269|gb|EFC00233.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|283789995|gb|EFC28812.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290920528|gb|EFD97591.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|291095919|gb|EFE26180.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|291467320|gb|EFF09837.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|295127948|gb|EFG57582.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576342|gb|EFH95058.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|298694337|gb|ADI97559.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|312438521|gb|ADQ77592.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193770|gb|EFU24165.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|341848039|gb|EGS89208.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|341853073|gb|EGS93955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|359830118|gb|AEV78096.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|371970611|gb|EHO88028.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|374393991|gb|EHQ65287.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|375376912|gb|EHS80414.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|377704044|gb|EHT28355.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377706188|gb|EHT30488.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377706533|gb|EHT30829.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377711289|gb|EHT35522.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377732612|gb|EHT56663.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377736004|gb|EHT60034.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377750067|gb|EHT74005.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754805|gb|EHT78711.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377762208|gb|EHT86077.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 53/251 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP G + P WGT + Y K ++ AP EDW LW + +L+ R++++N REV+
Sbjct: 149 DP-GNQYSVPVSWGTTGLIYNPKKLKQ---AP-EDWSYLWENQQQLSKRMTLLNDVREVM 203
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L + + H +A+ GD+ VA+ +S+D
Sbjct: 204 GATLKMLGYSYNSTDPQHIQQAYQKLMDLKSNLASFTSDAWRPQVLSGDLSVAMCYSADA 263
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ ++ VVPKSG+SLW D AIP ++ V G + WI F LQ
Sbjct: 264 NEVMGENESLEYVVPKSGSSLWMDTLAIPKSA--------PNVEG----AYAWINFMLQP 311
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A EV S + KL +K SL PP IL E + P+
Sbjct: 312 DVA----AEVCKRLSFATPNQEAFKLLPPDVKSNQSL-------FPPEAILETCESIAPV 360
Query: 229 SEATLSDMSGW 239
E+ + G+
Sbjct: 361 PESISAVYDGY 371
>gi|418563214|ref|ZP_13127656.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
gi|371971758|gb|EHO89154.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|222152979|ref|YP_002562156.1| spermidine/putrescine extracellular binding protein [Streptococcus
uberis 0140J]
gi|222113792|emb|CAR41844.1| spermidine/putrescine extracellular binding protein [Streptococcus
uberis 0140J]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP + WKDLWRPE I +++ REV+G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDQMVDK---AP-KHWKDLWRPEYQNDIMLIDGAREVMG 181
Query: 73 ----SIAVQLNLALLA--NQ---------------SAHHLKAFGI-GDVWVAVGWS---S 107
+ LN ++ NQ A +K + I GD + + +S S
Sbjct: 182 LGLNTFGYSLNAKNMSQLNQVENKLQSLTPNIKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L H+ +VP G++LW D +P + E
Sbjct: 242 EMLDGNDHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|258436148|ref|ZP_05689131.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
gi|257848837|gb|EEV72822.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 45/150 (30%)
Query: 24 YRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLALL 83
Y WG IAY K ++ + W DLW GR+ M+N PREV+G +AL+
Sbjct: 133 YTWGITGIAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMG-------MALI 181
Query: 84 AN-------------QSAHHLK-------AFGIGDV---------WVAVGWSSDVLPAVK 114
N +S LK AF ++ W+ WS D A
Sbjct: 182 KNGFSNSTTNKEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDA--AFI 239
Query: 115 HMSN---VAVVPKSGASLWADLWAIPAASR 141
H N V+PK GA++WAD AIP ++
Sbjct: 240 HAQNPDVEYVIPKEGATIWADTMAIPKGAK 269
>gi|82750711|ref|YP_416452.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
gi|82656242|emb|CAI80656.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|15924092|ref|NP_371626.1| spermidine/putrescine-binding protein -like protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926687|ref|NP_374220.1| hypothetical protein SA0953 [Staphylococcus aureus subsp. aureus
N315]
gi|148267595|ref|YP_001246538.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393650|ref|YP_001316325.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979425|ref|YP_001441684.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005889|ref|ZP_05144490.2| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795167|ref|ZP_05644146.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407124|ref|ZP_05680273.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421784|ref|ZP_05684705.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|258443363|ref|ZP_05691706.1| potD protein [Staphylococcus aureus A8115]
gi|258444973|ref|ZP_05693290.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|258449852|ref|ZP_05697950.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|258454951|ref|ZP_05702914.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|269202713|ref|YP_003281982.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282894129|ref|ZP_06302360.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|282928624|ref|ZP_06336221.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|295405906|ref|ZP_06815715.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|296276503|ref|ZP_06859010.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus MR1]
gi|297246376|ref|ZP_06930220.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|384864329|ref|YP_005749688.1| extracellular solute-binding family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|387150244|ref|YP_005741808.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|415691940|ref|ZP_11454006.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416839739|ref|ZP_11903097.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|416848398|ref|ZP_11907741.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|417652145|ref|ZP_12301898.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417800731|ref|ZP_12447840.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|417894254|ref|ZP_12538276.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|418321797|ref|ZP_12933136.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|418424241|ref|ZP_12997366.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427168|ref|ZP_13000183.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433038|ref|ZP_13005820.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436702|ref|ZP_13008507.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439580|ref|ZP_13011290.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442625|ref|ZP_13014229.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445690|ref|ZP_13017170.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448640|ref|ZP_13020034.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451446|ref|ZP_13022782.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454521|ref|ZP_13025784.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457395|ref|ZP_13028600.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418568105|ref|ZP_13132459.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|418639784|ref|ZP_13202025.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|418653105|ref|ZP_13215051.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|418662610|ref|ZP_13224153.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|418875036|ref|ZP_13429298.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877941|ref|ZP_13432177.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880777|ref|ZP_13434996.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883704|ref|ZP_13437901.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886362|ref|ZP_13440511.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418894554|ref|ZP_13448652.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418914198|ref|ZP_13468170.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919949|ref|ZP_13473889.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418931087|ref|ZP_13484934.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418990963|ref|ZP_13538624.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|419784831|ref|ZP_14310592.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|424777737|ref|ZP_18204696.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|443635803|ref|ZP_21119925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
gi|13700903|dbj|BAB42199.1| potD [Staphylococcus aureus subsp. aureus N315]
gi|14246872|dbj|BAB57264.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu50]
gi|147740664|gb|ABQ48962.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus subsp. aureus JH9]
gi|149946102|gb|ABR52038.1| extracellular solute-binding protein family 1 [Staphylococcus
aureus subsp. aureus JH1]
gi|156721560|dbj|BAF77977.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu3]
gi|257789139|gb|EEV27479.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257841279|gb|EEV65724.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842117|gb|EEV66545.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|257851453|gb|EEV75392.1| potD protein [Staphylococcus aureus A8115]
gi|257856095|gb|EEV79013.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|257856772|gb|EEV79675.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|257862831|gb|EEV85596.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|262075003|gb|ACY10976.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282589663|gb|EFB94749.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|282763615|gb|EFC03744.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|285816783|gb|ADC37270.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|294969341|gb|EFG45361.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|297176742|gb|EFH36002.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|312829496|emb|CBX34338.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130312|gb|EFT86299.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|323440651|gb|EGA98361.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|323441678|gb|EGA99324.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|329725165|gb|EGG61654.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334277733|gb|EGL95956.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|341852761|gb|EGS93645.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|365224412|gb|EHM65677.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|371980787|gb|EHO97988.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|375016796|gb|EHS10431.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|375019817|gb|EHS13368.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|375035997|gb|EHS29088.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|377695555|gb|EHT19916.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377695907|gb|EHT20264.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377715438|gb|EHT39628.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377715924|gb|EHT40110.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377723085|gb|EHT47210.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377726544|gb|EHT50655.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377731670|gb|EHT55723.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377757700|gb|EHT81588.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377766948|gb|EHT90772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771081|gb|EHT94839.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|383363675|gb|EID41003.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|387719583|gb|EIK07525.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387720828|gb|EIK08727.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387725904|gb|EIK13495.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387728551|gb|EIK16038.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|387731067|gb|EIK18407.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|387736676|gb|EIK23765.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|387738217|gb|EIK25270.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387738316|gb|EIK25360.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|387745418|gb|EIK32173.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745982|gb|EIK32727.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747953|gb|EIK34652.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|402346417|gb|EJU81507.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|408423334|emb|CCJ10745.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408425324|emb|CCJ12711.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408427312|emb|CCJ14675.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408429299|emb|CCJ26464.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408431287|emb|CCJ18602.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408433281|emb|CCJ20566.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408435272|emb|CCJ22532.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408437257|emb|CCJ24500.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|443408862|gb|ELS67373.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|385781330|ref|YP_005757501.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|418574553|ref|ZP_13138720.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
gi|364522319|gb|AEW65069.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|371978684|gb|EHO95925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|422418309|ref|ZP_16495264.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|422421436|ref|ZP_16498389.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 54/233 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F N + W L+ P+L +I ++
Sbjct: 117 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L AH ++A +GD VA
Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVA 233
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V +S + + ++ V+PK G++LW D IP + K + G H++
Sbjct: 234 VTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKF 281
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLD--TNL 209
I F L+ A E + A+P+ E + LP E+ + P++D TNL
Sbjct: 282 INFMLKPENA-AINAEYVGYATPN--EKAVKLLPKEISSDERFYPNMDELTNL 331
>gi|282918801|ref|ZP_06326536.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
gi|282316611|gb|EFB46985.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+ E + LP E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|418430079|ref|ZP_13002996.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387719144|gb|EIK07096.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418282905|ref|ZP_12895662.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
gi|365168502|gb|EHM59840.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
Length = 357
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|416851513|ref|ZP_11908658.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|356739002|gb|EHI64234.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
Length = 357
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y + KH AP + WKDLWRPE +I +V+ RE++G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDQQV-KH--AP-KHWKDLWRPEYKDKIMLVDGAREMLG 181
Query: 73 --------SI---------AVQLNLALLANQ----SAHHLKAFGI-GDVWVAVGWS---S 107
S+ A + L L + A +K + I GD + V +S S
Sbjct: 182 VGLTTFGNSVNSKNMDQLKAAEKRLQTLTSNIKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L KH+ VVP G++LW D +P + E
Sbjct: 242 EMLANNKHLH--YVVPTEGSNLWFDNLVLPKTMKHE 275
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 55/243 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP+ + + P+ WGT + Y ++ AP EDW LW+ + L R++++N REV+
Sbjct: 132 DPKNRY-SIPFNWGTTGLLYNSEILKQ---AP-EDWNYLWQNQALLNKRMTLLNDVREVM 186
Query: 72 GSIAVQLNLALLANQSAHHLK--------------AFGI---------GDVWVAVGWSSD 108
G++ L + +Q+ + +K AF GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSY-NSQNENEIKQAYEKLTELKPAIAAFDTDAWQNQMLAGDLVLAMCYSAD 245
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ K + V+P+SG+SLW D IP ++ I G + WI F LQ
Sbjct: 246 AIRVSKENPKLKYVIPRSGSSLWTDTMVIPKSA----PNIDG--------AYAWINFILQ 293
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A Q + A+P++ L LP + +K L PP +L + E + P
Sbjct: 294 PEIAATTSQR-LKIATPNSAGFEL--LPNQ-IKNNDDL-------FPPNALLEKCERISP 342
Query: 228 LSE 230
L +
Sbjct: 343 LGQ 345
>gi|384549863|ref|YP_005739115.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302332712|gb|ADL22905.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 357
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQDGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 44/180 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP + + P WGT + Y K K P EDW LW + +L+ R++++N REV+
Sbjct: 146 DP-NNLHSIPLSWGTTGLIYNSKKLSK---VP-EDWSYLWQDKDKLSRRMTLLNDVREVM 200
Query: 72 GSIAVQLNLALLANQSAHHLKAFGI----------------------GDVWVAVGWSSDV 109
G+ L + + KA+ GD+W+A+ +SSD
Sbjct: 201 GATLKMLGYSYNSTNPQEIKKAYETLVDLKPSIASFSSDAWRSQILSGDLWIAMCYSSDA 260
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ ++ V+PKSG+SLW D AIP A LE + WI F L+
Sbjct: 261 AEIMAENPDLQYVLPKSGSSLWTDTLAIPKTAPNLEGA-------------YAWINFMLE 307
>gi|456012794|gb|EMF46482.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Planococcus halocryophilus Or1]
Length = 358
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV IA+ + E W DLW P L + +V+S RE+IG
Sbjct: 126 FDP-GNEYSIPYFWGTVGIAFNPTLLEGQTF---ESWDDLWNPSLEQEVILVDSAREIIG 181
Query: 73 ----SIAVQLNLALLAN--QSAHHLKAFG------IGD----------VWVAVGWSSDVL 110
S+ LN + ++ LK G IGD VAV WS
Sbjct: 182 LGLNSLGYSLNSTNVDELREATDKLKTMGPNVKAIIGDEIVELMRREEAAVAVTWSGQAA 241
Query: 111 PAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ ++ VPK G++LW D IP + G + G H +I F L
Sbjct: 242 DMMWINEDIDYSVPKEGSNLWFDNMIIP--------KTAGNIEG----AHAFINFMLD 287
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ + Y K+K + E W DLW LA I +++ RE++G
Sbjct: 125 FDPNNEF-SIPYFWGTLGVLYNKTKVPED--LKFEKWNDLWDTRLANNILLIDGAREMMG 181
Query: 73 ------------SIAVQLNLALLANQSAH-HLKAFGI---------GDVWVAVGWSSDVL 110
+ V LNLA + H ++KA + W +V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAERKLELLHPNVKAINADEKKMLMINNEAWASVVFSGDAK 241
Query: 111 PAVKHMSN-VAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ N V +PK G +LW D IP S+ E +++I F L+
Sbjct: 242 AIMGENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFINFMLKPE 289
Query: 170 RALPFKQEVIPGASPSA 186
A E I A+P+
Sbjct: 290 NAAK-NSEFIGYATPNT 305
>gi|257427817|ref|ZP_05604215.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257274658|gb|EEV06145.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKH-MSNVAVVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGYKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|433659509|ref|YP_007300368.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|432510896|gb|AGB11713.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 344
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S+ + L H++I F Q+
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA------------LAHKFINFMYQSE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + KLP EL + P +E + + EF+ +
Sbjct: 279 N----QAEIVTSLGYASATNAGRDKLPEELKNNRTIF--------PSSEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GAETLA 332
>gi|294497048|ref|YP_003560748.1| spermidine/putrescine import ABC transporter
spermidine/putrescine-binding protein PotD [Bacillus
megaterium QM B1551]
gi|294346985|gb|ADE67314.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus
megaterium QM B1551]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 44/210 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I+ W DLW P+L +I + + REV+G
Sbjct: 126 FDP-GNKYSIPYFWGTVGIVYNSDMIHG---KKIKSWDDLWDPKLKNQILLADGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
LN +L AH ++KA +GD + V WS D
Sbjct: 182 MGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKAI-VGDEIKMLLANEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP ++ V G H+++ F L
Sbjct: 241 SEIMSENDKLNYVVPEEGSNLWFDNMVIPKTAK--------NVEG----AHKFMNFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGEL 198
A E + ++P+ + L LP E+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KQALDYLPKEV 315
>gi|332687056|ref|YP_004456830.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius ATCC 35311]
gi|379727040|ref|YP_005319225.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
gi|332371065|dbj|BAK22021.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD (TC 3.A.1.11.1) [Melissococcus plutonius ATCC
35311]
gi|376317943|dbj|BAL61730.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGT+ I Y K N+ + W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNR-YSIPYFWGTLGIIYNDKFIEKSNM---QHWDDLWRPELKNNLMLIDGAREVLG 181
Query: 73 ----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS---S 107
S+ LN L A++ H +K + I + VAV +S +
Sbjct: 182 FSLNSLGYSLNSKNNEQLKEAAHKLNHLTSNVKAIVADEIKMYMINEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L KH+ V+P G++LW D IP +
Sbjct: 242 EMLEQNKHLH--YVIPSEGSNLWFDNIVIPKTVK 273
>gi|427419359|ref|ZP_18909542.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425762072|gb|EKV02925.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 381
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 54/235 (22%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSIAVQLNL 80
PY WGT + Y AP DW LW L+ +++M++ RE +G++ L
Sbjct: 161 PYSWGTTGLLYNSEVLTT---APT-DWDYLWDNSDVLSRKMTMLDDVRETMGAVLSSLGY 216
Query: 81 ALLANQSAH----------------HLKAFG------IGDVWVAVGWSSDVLPAVKHMSN 118
+ A A K+FG GD+ +++ +S + +P N
Sbjct: 217 SYNATDPAQLEEAYQKLLELKPSLASFKSFGWQDELLSGDLLLSMVYSVEGIPVSLENPN 276
Query: 119 VA-VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQ 176
V+P+SG+S+W D IPA A +E ++WI F LQ + +
Sbjct: 277 FKYVIPESGSSVWTDTMVIPASAPNVEAA-------------YEWINFNLQPQVSKDTVE 323
Query: 177 EVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
+ A+P+ T+ L ELL K NL PP +ILA+ E + P+ EA
Sbjct: 324 RLF-FATPNGEAMTM--LSQELLDNK-----NLF---PPEDILAKCEGIAPVGEA 367
>gi|387780215|ref|YP_005755013.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
gi|344177317|emb|CCC87783.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYNL-NDRNSHHLKEAVRDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|417322038|ref|ZP_12108572.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
Length = 344
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S+ + L H++I F Q+
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA------------LAHKFINFMYQSE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + KLP EL + P +E + + EF+ +
Sbjct: 279 N----QAEIVTSLGYASATNAGRDKLPEELKNNRTIF--------PSSEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GAETLA 332
>gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 344
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ + PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S+ + L H++I F Q+
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKA------------LAHKFINFMYQSE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + KLP EL + P +E + + EF+ +
Sbjct: 279 N----QAEIVTSLGYASATNAGRDKLPEELKNNRTIF--------PSSEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GAETLA 332
>gi|253316355|ref|ZP_04839568.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
Length = 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ ++ +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQVLLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP + + P+ WGT + Y K P EDW+ LW+ + L R++++N REV+
Sbjct: 136 DPNNRY-SIPFNWGTTGLLYNSEKLEN----PPEDWEYLWQNQDKLYKRMTLLNDVREVM 190
Query: 72 GSIAVQLNLALLAN------QSAHHLK-------AFGI---------GDVWVAVGWSSDV 109
G+ L + + Q+ LK AF GD+ +A+ +S+D
Sbjct: 191 GAALKMLGYSYNSQNETEVKQAYEKLKILKPAIAAFDTDAWQNQLLAGDLLLAMCYSTDA 250
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ K V+P+SG+SLW D IP +I + G + WI LQ
Sbjct: 251 VNISKENPKFKYVIPRSGSSLWTDTIVIP--------KIAANLAG----AYAWINLILQP 298
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+V S ST + E L + +TNL PP +LA+ E P+
Sbjct: 299 --------DVTAKLSKRLNISTPNRAGFEQLPKQSRENTNLF---PPESLLAKCERSTPI 347
Query: 229 SE 230
E
Sbjct: 348 GE 349
>gi|448236906|ref|YP_007400964.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
gi|445205748|gb|AGE21213.1| spermidine/putrescine ABC importer substrate-binding protein
[Geobacillus sp. GHH01]
Length = 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 47/222 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + + W DLW P L +I +V+ REV+G
Sbjct: 126 FDPHNR-YSVPYFWGTVGIVYNREMLGGKRMTS---WNDLWDPSLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD + V WS D
Sbjct: 182 MALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAI-VGDEIKLLLADEEAAIGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVPK G++LW D IP + K I G H +I F L
Sbjct: 241 AEIIAENDKLDYVVPKEGSNLWFDNMVIPKTA----KNIEG--------AHAFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
A E + ++P+ + L LP ++ + P LD+
Sbjct: 289 KHAAQ-NAEYVGYSTPN--KKALRYLPKDIAGDRRFYPDLDS 327
>gi|152988127|ref|YP_001346915.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
gi|150963285|gb|ABR85310.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
Length = 353
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 62/262 (23%)
Query: 5 LRRNDAGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 57
L+ DAG +D +G + PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSVPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 158
Query: 58 AGRISMVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFG 95
GR+++++ P+E+ G+ L AL+ A S+ ++K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIG 148
+G++WVA G+SSD+ A +P+ GA L D I SR
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGSR------- 271
Query: 149 GRVRGLSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDT 207
+P L +++I+F L A ++ G +P+A + +P + T
Sbjct: 272 ------NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAAQPFI---------RPEIRT 315
Query: 208 NLIAGVPPAEILARFEFLEPLS 229
L A P A AR E L+ L+
Sbjct: 316 -LAALFPDAATQARLEPLKDLN 336
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP K C P+ WGT + Y K AP EDW LW + +L R++++N REVI
Sbjct: 133 DPNNKYCI-PFNWGTTGLIYNSEKLET---AP-EDWDYLWQNKEKLNKRMTLLNDVREVI 187
Query: 72 GSIAVQLNLALLAN------QSAHHLK-------AFGI---------GDVWVAVGWSSDV 109
G+ L + + Q+ LK AF GD+ +A+ +S D
Sbjct: 188 GATLRMLGYSYNSQNETEIKQAYEKLKVLKPAVSAFDTDAWQNQLLAGDLLLAMCYSGDA 247
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + + V+P+SG++LW D IP + + G + WI + LQ
Sbjct: 248 VKMSRENPKLKFVIPRSGSTLWTDNLVIPK----DAPNLAG--------AYAWINWILQP 295
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ F E + A+P++ L LP L + D NL PP L + E + PL
Sbjct: 296 EVSAQFT-ERLNIATPNSAAFDL--LPKRLQE-----DENLF---PPESSLEKCERVTPL 344
Query: 229 SE 230
+
Sbjct: 345 GK 346
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 49/261 (18%)
Query: 5 LRRNDAGEIDPR---GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
L D +DP G + P GT +AY + + + EDW+ +W R+
Sbjct: 146 LENLDQAFLDPSYDPGSAYSLPVSLGTTGLAYNSAAIIEEIGSEPEDWQFMWEHIDRLRL 205
Query: 62 SMVNSPREVIGSIAVQLNLALLANQSAHHLKAFG----------------------IGDV 99
+++N PREV+G LN + ++ AF GD
Sbjct: 206 TLLNDPREVMGMALHTLNYSYNSDNGDELQAAFERLQDLKPAVSKFDTYAWAEPLMAGDY 265
Query: 100 WVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
+++ +S D L AV+ ++ ++P SG S+W D IP +
Sbjct: 266 LISMAYSGDGLNAVRQNPDIKYILPASGTSIWTDAVVIP------------KTAPDPEAA 313
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ WI+F +Q A +E G +A ++ L K+ EL ++ A +P AEI
Sbjct: 314 YAWIDFIMQPEIAARMSEESSYG---TANKAALPKIKEEL--------KDIPAWLPSAEI 362
Query: 219 LARFEFLEPLSEATLSDMSGW 239
LA+ + L L + L G+
Sbjct: 363 LAKSDRLVKLPDEVLQVYEGY 383
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 71
DP + + P+ WGT + Y K AP EDW+ LW+ +L R +++N REV+
Sbjct: 133 DPNNRY-SIPFNWGTTGLLYNSEKLTN---AP-EDWEYLWQNQDQLNKRFTLLNDVREVM 187
Query: 72 GSIAVQL---------NLALLANQSAHHLK----AFGI---------GDVWVAVGWSSDV 109
G+ L N A Q LK AF GD+ VA+ +S+D
Sbjct: 188 GATLRMLGYSYNSQNENEVKQAYQKLQILKPAIAAFDTDAWQNKILAGDLAVAMCYSADA 247
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + + V+P+SG+SLW D IP ++ I G + WI LQ
Sbjct: 248 VKICQENPKLKFVIPRSGSSLWTDTIVIPKSN----PNIAG--------AYAWINLILQP 295
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
EV S ST + E L +TNL PP +LA+ E L PL
Sbjct: 296 --------EVAAKISERLYISTPSRAGFEQLPKAIQENTNLF---PPQSLLAKCERLTPL 344
Query: 229 SE 230
+
Sbjct: 345 GK 346
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 56/244 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY WG+ I + I WKDLW P+ G + + + REV
Sbjct: 121 DPDNQ-YSIPYTWGSTGIGINAEAIDPKS---ITSWKDLWNPKWKGSLLLTDDVREVF-H 175
Query: 74 IAVQLN---------------LALLANQSAHHL--------KAFGIGDVWVAVGWSSDVL 110
+A+++N LL + + L + + GDV + + W+ +V+
Sbjct: 176 MALKINGHSGNSTDPAEIKQAYELLKTLTPNVLVYNSDAPREPYMAGDVNLGMIWNGEVI 235
Query: 111 PAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
A + ++ + PK GA+ W D +AIPA + + + ++I+F LQ
Sbjct: 236 QAQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKENAL------------KFIDFMLQPE 283
Query: 170 RALPFKQ--EVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A K+ E I A+P+ + + L E L+ P++ PPAE++ + +F +
Sbjct: 284 IA---KRCVEFIGYATPN---KSALDLLDEKLRNNPTI-------FPPAEVIQKGDFQQD 330
Query: 228 LSEA 231
+ EA
Sbjct: 331 VGEA 334
>gi|289434072|ref|YP_003463944.1| spermidine/putrescine ABC transporter binding protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289170316|emb|CBH26856.1| spermidine/putrescine ABC transporter, binding protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 54/233 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F N + W L+ P+L +I ++
Sbjct: 117 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKVMFPDKNF---DTWDALFDPDLKNQILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L AH ++A +GD VA
Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVA 233
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V +S + + ++ V+PK G++LW D IP + K + G H++
Sbjct: 234 VTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKF 281
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLD--TNL 209
I F L+ A E + A+P+ E + LP E+ + P++D TNL
Sbjct: 282 INFMLKPENA-AINAEYVGYATPN--EKAVKLLPKEISSDERFYPNMDELTNL 331
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQI 147
GW+ DV A K+ NV+ +PK GA + D++A+PA ++ +TK I
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKKKTKPI 293
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K Y G IAY K + I W+DLW PE G++ +++ RE+IG
Sbjct: 122 FDPGNKYSIV-YTSGVTGIAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIG 176
Query: 73 ------------SIAVQLNLALLANQS-AHHLKAFGIGDV---------WVAVGWSSDVL 110
+ ++N A L ++ ++ AF ++ W+A WS D
Sbjct: 177 MALKKQGKSNSTTDEAEINAAALDLKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAA 236
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRG--LSPLI----HQWIE 163
+ +VA VVP+ GA++++D +AIP ++ K++ + L P + +++I
Sbjct: 237 FIAEENPDVAYVVPEEGATIFSDNYAIPKGAK--NKELAEKFINFMLEPEVSAKNYEYIG 294
Query: 164 FCLQTARALPFKQE 177
+ +A+ F E
Sbjct: 295 YSNPNTKAMEFHSE 308
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 55/237 (23%)
Query: 11 GEIDPR----------GKICAAPYRWGTVVIAY--KKSKFRKHNLAPIEDWKDLWRPELA 58
G +DP+ G PY WGT I Y K K R AP++ W+ ++ PE+
Sbjct: 118 GNLDPKLMARVAKYDPGNEHLVPYMWGTTGIGYNVKMVKERLGENAPLDSWRLIFDPEVV 177
Query: 59 GR-----ISMVNSPREVIGSIAVQLNLA----------------------LLANQSAHHL 91
+ +S+++SP E ++ L L + ++ ++
Sbjct: 178 SKLADCGVSVMDSPDETFPAMLNYLGLDPDGHKVEDVDKVAEAYMKIRPHIRKFHNSQYI 237
Query: 92 KAFGIGDVWVAVGWSSDVLPA---VKHMSN----VAVVPKSGASLWADLWAIPAASRLET 144
G+V VA+G+S D+L A + N V V+P GA LW D+ AIPA +
Sbjct: 238 NDLANGEVCVAMGYSGDILQARDRAQEADNGNEIVYVIPSEGAQLWFDMLAIPADAPHPE 297
Query: 145 KQIGGRVRGLSP----LIHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 194
L P I ++ + A+A P E + PG PS E T+ +L
Sbjct: 298 NAHTFINYILEPKVTAAISDYVAYANANAKATPLVSEDVRNDPGIYPS--EETMNRL 352
>gi|401871804|pdb|4GL0|A Chain A, Putative SpermidinePUTRESCINE ABC TRANSPORTER FROM
LISTERIA Monocytogenes
Length = 333
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV G L
Sbjct: 108 YSXPYFWGTLGIIYNKEXFPDKNF---DTWNALFDPELKNQILLIDGAREVXGLGLNSLG 164
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L AH ++KA +GD VAV +S + +
Sbjct: 165 YSLNDTNKAHLQAARDKLETXTPNVKAI-VGDEIKLLXADNEAGVAVTFSGEAAEXLSEN 223
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 224 EDLEYVIPKDGSNLWFDNXVIPKTA----KNVDGA--------HKFINFXLKPENA-AIN 270
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+A L LP E+
Sbjct: 271 AEYVGYATPNAKAVEL--LPKEI 291
>gi|443700412|gb|ELT99374.1| hypothetical protein CAPTEDRAFT_95386, partial [Capitella teleta]
Length = 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 36/161 (22%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPRE 69
G PY WGT I Y K+ K AP++ W + PE + ++ +++P E
Sbjct: 86 GNTYGIPYLWGTTGIGYNKAAVEKVLGKDAPVDSWALILEPENMKKLQKCGVAFLDAPSE 145
Query: 70 VIGSIAVQLNLA----------------------LLANQSAHHLKAFGIGDVWVAVGWSS 107
V+ S+ L + + S L GD+ VA+GWS
Sbjct: 146 VLPSVMTYLGIPGDSLKMGDYKKAVERMKAVAPYITYYNSVRSLSDLANGDICVALGWSG 205
Query: 108 DVLPA---VKHMSN----VAVVPKSGASLWADLWAIPAASR 141
D++ A K +N VVPK GA +W D+ AIP S+
Sbjct: 206 DMMMARDRAKEANNGLDIRYVVPKEGAPMWFDMLAIPKDSK 246
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L +H ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKSHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 117 SNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGEL 198
E + A+P+ E + LP E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 38/158 (24%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP K Y WG IAY +K+ K AP DW DLW+ E G++ +++ RE+I
Sbjct: 119 EFDPGNKYSIV-YTWGVTGIAYN-TKYVKQ--APT-DWADLWKDEYKGKVLLLDDNREII 173
Query: 72 GSIAVQLNLALLANQSAH----------------HLKAFGIGDV---------WVAVGWS 106
G + L A +N S + ++ AF ++ W+ WS
Sbjct: 174 G---MALKKAGKSNSSENEADINAAVDDLRKLVPNVLAFDTDNIKQKMIAEEGWIGTVWS 230
Query: 107 SDVLPAVKHMSNVAV---VPKSGASLWADLWAIPAASR 141
D +V H N V +PK+G+++++D +AIP S+
Sbjct: 231 GDA--SVIHGENPDVAFMIPKTGSTIFSDNYAIPKGSK 266
>gi|417796275|ref|ZP_12443490.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21305]
gi|334269774|gb|EGL88187.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21305]
Length = 357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 RDNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|417895710|ref|ZP_12539688.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21235]
gi|341841387|gb|EGS82848.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21235]
Length = 357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++HHLK +GD +A+ WS P
Sbjct: 185 NKLGYN-LNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIALVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|315302123|ref|ZP_07873078.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
gi|313629511|gb|EFR97689.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
Length = 353
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 54/233 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F N + W L+ P+L +I ++
Sbjct: 113 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKKMFPDKNF---DTWDALFDPDLKNQILLI 169
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L +L AH ++A +GD VA
Sbjct: 170 DGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVA 229
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V +S + + ++ ++PK G++LW D IP + K + G H++
Sbjct: 230 VTFSGEAAEMLSENEDLEYMIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKF 277
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLD--TNL 209
I F L+ A E + A+P+ E + LP E+ + P++D TNL
Sbjct: 278 INFMLKPENA-AINAEYVGYATPN--EKAVKLLPKEISSDERFYPNMDELTNL 327
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 51/153 (33%)
Query: 24 YRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLALL 83
Y WG IAY K ++ P W DLW GR+ M+N PREV+G +AL+
Sbjct: 132 YTWGITGIAYNKKYVKE---TPTS-WSDLWNEAYKGRVIMLNDPREVMG-------MALI 180
Query: 84 AN-------------QSAHHLK-------AFGIGDV---------WVAVGWSSDVL---- 110
N +S LK AF ++ W+ WS D
Sbjct: 181 KNGFSNSTTNKDELEKSFADLKKMLPGVMAFDTDNIKQKMIAEEAWIGTVWSGDAAIING 240
Query: 111 --PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
P V++ V+PK GA++WAD AIP ++
Sbjct: 241 QNPDVEY-----VIPKEGATIWADTLAIPKGAK 268
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 104/260 (40%), Gaps = 66/260 (25%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + + IE W ++ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDEIESWSVIFEPENAAKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
I+ ++S E+I ++ L L + +A + KA
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSQNAADYQKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLETKQIG 148
G++ VA G+S DV A K + +PK GA+LW D+ AIPA +S +E
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGANLWFDMLAIPADSSNVEQA--- 283
Query: 149 GRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTN 208
H +I++ L + EVI S + GEL+ + D +
Sbjct: 284 ----------HAFIDYLL--------RPEVIAAVSDYVGYANPNLKAGELMDQEVREDAS 325
Query: 209 LIAGVPPAEILARFEFLEPL 228
+ PP E+L R + L
Sbjct: 326 V---YPPQEVLDRLYVMAEL 342
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 47/178 (26%)
Query: 11 GEIDPR----------GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELA 58
G +DPR G PY WGT I Y K ++ AP++ W + +PE
Sbjct: 108 GNLDPRIMTLLAEKDPGNQYGVPYLWGTTGIGYNVDKVKEVLGEDAPVDSWDLVMKPENL 167
Query: 59 GRIS-----MVNSPREVIGS-----------------------IAVQLNLALLANQSAHH 90
++S +++P E+ + + +QL + S+ +
Sbjct: 168 AKLSQCGVAFLDAPTEIFAAALNYQGLDPNSTNASDYNGPATELMMQLRPHITYFHSSKY 227
Query: 91 LKAFGIGDVWVAVGWSSDVLPAVKHMS------NVAV-VPKSGASLWADLWAIPAASR 141
+ GD+ VAVGWS D+L A VA +PK GA +W D+ IP +R
Sbjct: 228 INDLANGDICVAVGWSGDILQARDRADEAERGVKVAYRIPKEGALMWVDMLTIPKDAR 285
>gi|357049604|ref|ZP_09110823.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
gi|355383069|gb|EHG30156.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
Length = 359
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 95/252 (37%), Gaps = 63/252 (25%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL-- 80
PY WGT+ I + I W DLWRPE A I +V+ RE +G L+L
Sbjct: 138 PYFWGTIGIMVNSDQIDP---TTIHGWADLWRPEFANDILVVDGARETLGMALQTLDLSQ 194
Query: 81 ----------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL------PAVK 114
AL N A +K + D + +G+S D PA+
Sbjct: 195 NELDTANLQQAIEKLEALRPNVKAVLTDEIKTLMVNNDAPIGIGYSGDAAYVMSENPAIT 254
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPF 174
+ VVP G ++W D +AIP G + G + +I F L+ A
Sbjct: 255 Y-----VVPNDGGAIWTDNFAIPKTV--------GNLEG----AYAFINFMLRPENAAQ- 296
Query: 175 KQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEATLS 234
E + A+PS L LP EL K A P E + + E E L + +
Sbjct: 297 NAEYVGYATPSETAKQL--LPTELTSNK--------AFYPEPEAMQQMEHYEYLGKNAVE 346
Query: 235 DMSG----WEIG 242
+ W++G
Sbjct: 347 QYNDLFLEWKLG 358
>gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
K5]
gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter
cryohalolentis K5]
Length = 374
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 51/246 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
++DP K + PY WG+ +A + A + W DLWRPE G++ ++N REV
Sbjct: 142 KVDPENK-YSIPYMWGSTGLAINGETV---DPATVNSWNDLWRPEYKGQVMLMNDMREVF 197
Query: 72 GSIAVQLNLA------------------LLANQSAHHLKA----FGIGDVWVAVGWSSDV 109
G + L + L+ N + A + G+ V + W+ +
Sbjct: 198 GMALLTLGYSGNSRNPDEIKAAYEKLTTLMPNVKTFNSDASRMPYMEGETSVGMTWNGEA 257
Query: 110 LPAVKH--MSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ A S V P GA LW D + IP + Q+ H++I++ L+
Sbjct: 258 IIANSEGLTSLVYKYPTEGAILWMDNFVIPKNAT----QVDAA--------HKFIDYLLR 305
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
+ +E I ASP+ + +P + +K P++ P ++LA+ EF E
Sbjct: 306 PENSKIVSEE-IGYASPNIAAREM--MPDD-VKNNPTI-------YPSKDVLAKAEFQED 354
Query: 228 LSEATL 233
+ + L
Sbjct: 355 VGDEAL 360
>gi|393201891|ref|YP_006463733.1| spermidine/putrescine-binding periplasmic protein [Solibacillus
silvestris StLB046]
gi|327441222|dbj|BAK17587.1| spermidine/putrescine-binding periplasmic protein [Solibacillus
silvestris StLB046]
Length = 358
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV + Y + H E W+DLW P L ++ +V+ REVIG
Sbjct: 126 FDP-GNEYSIPYFWGTVGVVYNPNLIEDH--LTFETWEDLWDPSLKRKVFLVDGSREVIG 182
Query: 73 ----SIAVQLNLA---LLANQSAH------HLKAFGIGDVWVAVGWSSDVLPAVKHMSNV 119
SI LN+ LL + H ++KA IGD + +++ A+
Sbjct: 183 MGLNSIGESLNVKDEDLLREATDHLIELSPNIKAI-IGDEITPLMINNEASVALTFSGQA 241
Query: 120 A-----------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A VP+ G++LW D IP S+ + G H++I F L
Sbjct: 242 ADMMWENEELEFAVPQEGSNLWFDNMVIPKTSQ--------NIEG----AHKFINFMLDP 289
Query: 169 ARA 171
A
Sbjct: 290 ENA 292
>gi|406664769|ref|ZP_11072544.1| Spermidine/putrescine-binding periplasmic protein precursor
[Bacillus isronensis B3W22]
gi|405387617|gb|EKB47041.1| Spermidine/putrescine-binding periplasmic protein precursor
[Bacillus isronensis B3W22]
Length = 358
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV + Y + H E W+DLW P L ++ +V+ REVIG
Sbjct: 126 FDP-GNEYSIPYFWGTVGVVYNPNLIEDH--LTFETWEDLWDPSLKRKVFLVDGSREVIG 182
Query: 73 ----SIAVQLNLA---LLANQSAH------HLKAFGIGDVWVAVGWSSDVLPAVKHMSNV 119
SI LN+ LL + H ++KA IGD + +++ A+
Sbjct: 183 MGLNSIGESLNVKDEDLLREATDHLIELSPNIKAI-IGDEITPLMINNEASVALTFSGQA 241
Query: 120 A-----------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A VP+ G++LW D IP S+ + G H++I F L
Sbjct: 242 ADMMWENEELEFAVPQEGSNLWFDNMVIPKTSQ--------NIEG----AHKFINFMLDP 289
Query: 169 ARA 171
A
Sbjct: 290 ENA 292
>gi|379795473|ref|YP_005325471.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356872463|emb|CCE58802.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNETF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L + + HHLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDSNPHHLKEAERDLTKLSPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|406658463|ref|ZP_11066603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
gi|405578678|gb|EKB52792.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
Length = 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 99/249 (39%), Gaps = 61/249 (24%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFR---KHNLAPIEDWKDLWRPELAGRISMVNS 66
A DP+ + PY WGTV I Y KH W+DLWRPE I +++
Sbjct: 124 AKSFDPKND-YSIPYFWGTVGIVYNDKMVESTPKH-------WEDLWRPEYRNNIMLIDG 175
Query: 67 PREVIG----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVG 104
REV+G + LN L N A +K + I GD + V
Sbjct: 176 AREVMGLGLNTFGYSLNSKNKQELGQVKEHLQDLTPNIKAIVADEMKGYMIQGDAAIGVT 235
Query: 105 WS---SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
+S S++L + K++ VVP+ G++LW D + P + E + + +
Sbjct: 236 FSGEASEMLDSNKNLH--YVVPEEGSNLWFDNFVFPKTMKHEKEA------------YAF 281
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I F L A E I A+P+ L LP ++ K A P +I+ +
Sbjct: 282 INFMLDPKNAAQ-NAEYIGYATPNNKAKEL--LPDDIKNDK--------AFYPSQQIINK 330
Query: 222 FEFLEPLSE 230
E + L +
Sbjct: 331 LEVYDNLGQ 339
>gi|400289028|ref|ZP_10791060.1| extracellular solute-binding protein [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 51/246 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
++DP K + PY WG+ +A + A + W DLW P+ G++ + N REV
Sbjct: 145 KVDPENK-YSIPYMWGSTGLAINGDTV---DPATVNSWNDLWDPKYKGQVMLTNDVREVF 200
Query: 72 GSIAVQLNLA------------------LLANQSAHHLKAFGI----GDVWVAVGWSSDV 109
G + L + L+ N + A + G+ + + W+ +
Sbjct: 201 GMALLTLGYSGNSRNPDEIKAAYDKLTTLMPNVKTFNSDATRMPYIEGETSLGMTWNGEA 260
Query: 110 LPAVKH--MSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ A S V P GA LW D + IP + KQ+ H++I++ L+
Sbjct: 261 VMANDEGLTSLVYKYPSEGAILWMDNFVIPKNA----KQVDA--------AHKFIDYLLR 308
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A +E I ASP+ L+ E ++ P++ P EILA+ EF E
Sbjct: 309 PENAKIVSEE-IGYASPNIAARELMD---ESVRNNPTI-------YPSQEILAKAEFQED 357
Query: 228 LSEATL 233
+ + L
Sbjct: 358 VGDEAL 363
>gi|257066715|ref|YP_003152971.1| family 1 extracellular solute-binding protein [Anaerococcus
prevotii DSM 20548]
gi|256798595|gb|ACV29250.1| extracellular solute-binding protein family 1 [Anaerococcus
prevotii DSM 20548]
Length = 359
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 33/156 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV- 70
E DP G + PY WGT I Y K++ + + WK+LW P+ G I + RE
Sbjct: 125 EYDP-GNEYSIPYLWGTFGILYNTKKYQASDF---DSWKNLWDPKFEGEILSFDGARETM 180
Query: 71 -IGSIAVQLNL-----------------------ALLANQSAHHLKAFGIGDVWVAVGWS 106
IG +A L+L A+LA++ ++ + + V + +S
Sbjct: 181 GIGLLANNLSLNTEDPKKLTEIRNELIGLMGNVKAILADEIRMYM---ALEEANVGLTFS 237
Query: 107 SDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
D A++ +++ V+PK G+++W D IP S+
Sbjct: 238 GDASSAIESNEDLSYVIPKEGSNIWFDTMVIPKTSK 273
>gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 356
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 95/252 (37%), Gaps = 63/252 (25%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL-- 80
PY WGT+ I + I W DLWRPE A I +V+ RE +G L+L
Sbjct: 135 PYFWGTIGIMVNSDQIDP---TTIHGWADLWRPEFANDILVVDGARETLGMALQTLDLSQ 191
Query: 81 ----------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL------PAVK 114
AL N A +K + D + +G+S D PA+
Sbjct: 192 NELDTANLQQAIEKLEALRPNVKAVLTDEIKTLMVNNDAPIGIGYSGDAAYVMSENPAIT 251
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPF 174
+ VVP G ++W D +AIP G + G + +I F L+ A
Sbjct: 252 Y-----VVPNDGGAIWTDNFAIPKTV--------GNLEG----AYAFINFMLRPENAAQ- 293
Query: 175 KQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEATLS 234
E + A+PS L LP EL K A P E + + E E L + +
Sbjct: 294 NAEYVGYATPSETAKQL--LPTELTSNK--------AFYPEPEAMQQMEHYEYLGKNAVE 343
Query: 235 DMSG----WEIG 242
+ W++G
Sbjct: 344 QYNDLFLEWKLG 355
>gi|422408927|ref|ZP_16485888.1| spermidine/putrescine-binding periplasmic protein 2, partial
[Listeria monocytogenes FSL F2-208]
gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes FSL F2-208]
Length = 312
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 41/189 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L
Sbjct: 133 SMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGY 189
Query: 81 ALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHMS 117
+L AH ++KA +GD VAV +S + +
Sbjct: 190 SLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSENE 248
Query: 118 NVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQ 176
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 249 DLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINA 295
Query: 177 EVIPGASPS 185
E + A+P+
Sbjct: 296 EYVGYATPN 304
>gi|225870494|ref|YP_002746441.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. equi 4047]
gi|225699898|emb|CAW93805.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. equi 4047]
Length = 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 55/241 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +V+ RE++G
Sbjct: 127 FDPHND-YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYQNSIMLVDGAREILG 181
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWS---S 107
+ +N AL N A +K + I GD + V +S S
Sbjct: 182 VGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L H+ VVP G++LW D +P + E + + +I F ++
Sbjct: 242 EMLDNNDHLH--YVVPSEGSNLWFDNLVLPKTMKHENEA------------YAFINFIMK 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP + +K P+ P E + + E +
Sbjct: 288 PENAAQ-NAEYIGYATPNTKAKAL--LPDD-IKNDPAF-------YPTDETVKKLEVYDN 336
Query: 228 L 228
L
Sbjct: 337 L 337
>gi|452877940|ref|ZP_21955185.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
gi|452185377|gb|EME12395.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
Length = 353
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 62/262 (23%)
Query: 5 LRRNDAGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 57
L+ DAG +D +G + PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLQKI 158
Query: 58 AGRISMVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFG 95
GR+++++ P+E+ G+ L AL+ A S+ ++K
Sbjct: 159 RGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIG 148
+G++WVA G+SSD+ A +P+ GA L D I SR
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGSR------- 271
Query: 149 GRVRGLSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDT 207
+P L +++I+F L A ++ G +P+A + KP + T
Sbjct: 272 ------NPDLAYRFIDFMLDGRNASELANQIGTG-TPNAAALPFI---------KPEIRT 315
Query: 208 NLIAGVPPAEILARFEFLEPLS 229
L A P A AR E L+ L+
Sbjct: 316 -LAALFPDAATQARLEPLKDLN 336
>gi|224368487|ref|YP_002602650.1| protein PotD1 [Desulfobacterium autotrophicum HRM2]
gi|223691203|gb|ACN14486.1| PotD1 [Desulfobacterium autotrophicum HRM2]
Length = 343
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 37/156 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP G + + PY WG+ +A+ + N+ WKDLWRPE R+ M + REV G
Sbjct: 115 DP-GNLYSIPYVWGSTAMAFNRDHVNPGNMT---SWKDLWRPEFKNRLVMNDDLREVFGV 170
Query: 74 IAVQLNLALLANQSAHHLKAF---------------------------GIGDVWVAVGW- 105
+ ++ AH AF G +W +
Sbjct: 171 GLIVNGFSVNDTDPAHIKTAFESIKTLMPNIRVFSGDSPKQPLLNLETYAGMIWNGEAYM 230
Query: 106 SSDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+S PA+++ V PK GA W D IP S+
Sbjct: 231 ASQEFPAIQY-----VYPKEGAIFWVDSMCIPKGSK 261
>gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
Length = 362
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 56/245 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV--I 71
DP + + PY WG+ I Y K++ + + WK+LW P+ G I + RE I
Sbjct: 127 DPENE-YSIPYLWGSFGIIYNTKKYKAEDFSS---WKNLWDPKFKGEILSFDGARETLGI 182
Query: 72 GSIAVQLNL-----------------------ALLANQSAHHLKAFGIGDVWVAVGWSSD 108
G +A L+L A+LA++ ++ +G+ V + +S D
Sbjct: 183 GLLADNLSLNTCDKDKLVRVSNELVGYMANVRAILADEIRMYM---ALGEANVGITFSGD 239
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
A+ ++A +PK G+++W D IP S+ + + +I F L+
Sbjct: 240 AASAIDSNPDLAYAIPKEGSNIWFDSMVIPKTSK------------NTEAAYAFINFMLR 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L+ P++ N P +++ R E +
Sbjct: 288 AENAAQ-NAEYISYATPNKKALALI---------DPAMRNNKTL-YPDDDVIDRLEVFKA 336
Query: 228 LSEAT 232
L + T
Sbjct: 337 LDKKT 341
>gi|414082499|ref|YP_006991199.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
gi|412996075|emb|CCO09884.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
Length = 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 54/248 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ D K + PY WGT+ I Y KF K ++ W DLW P+LA + +++ REVI
Sbjct: 125 DFDLNNKF-SIPYFWGTLGIIYN-DKFVKE--EEMQHWDDLWNPKLANNVMLIDGAREVI 180
Query: 72 G----SIAVQLNLALLANQSAH---------HLKAFGIGDV---------WVAVGWS--- 106
G S+ LN + +A ++KA ++ VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVKAIVADEIKMYMVQEESAVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
S++L +H+ V+P G++LW D + IP ++ K+ + +I F L
Sbjct: 241 SEMLDNNEHLH--YVIPSEGSNLWFDNFVIPKTAK--NKEAA----------YAFINFML 286
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
+ A E I ++P+ ++ + LP EL++ + P E ++ E E
Sbjct: 287 EPKNAAQ-NAEYIGYSTPN--KAAMAYLPKELVEDE--------QFYPSDETMSHLEVYE 335
Query: 227 PLSEATLS 234
L L+
Sbjct: 336 DLGAKYLA 343
>gi|392531710|ref|ZP_10278847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Carnobacterium maltaromaticum ATCC 35586]
Length = 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 54/248 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ D K + PY WGT+ I Y KF K ++ W DLW P+LA + +++ REVI
Sbjct: 125 DFDLNNKF-SIPYFWGTLGIIYN-DKFVKE--EEMQHWDDLWNPKLANNVMLIDGAREVI 180
Query: 72 G----SIAVQLNLALLANQSAH---------HLKAFGIGDV---------WVAVGWS--- 106
G S+ LN + +A ++KA ++ VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVKAIVADEIKMYMVQEESAVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
S++L +H+ V+P G++LW D + IP ++ K+ + +I F L
Sbjct: 241 SEMLDNNEHLH--YVIPSEGSNLWFDNFVIPKTAK--NKEAA----------YAFINFML 286
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
+ A E I ++P+ ++ + LP EL++ + P E ++ E E
Sbjct: 287 EPKNAAQ-NAEYIGYSTPN--KAAMAYLPKELVEDE--------QFYPSDETMSHLEVYE 335
Query: 227 PLSEATLS 234
L L+
Sbjct: 336 DLGAKYLA 343
>gi|443316510|ref|ZP_21045951.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783874|gb|ELR93773.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 382
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 66/248 (26%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSI 74
G + P+ WGT + Y EDW LW + LA +I++++ RE +G+
Sbjct: 156 GNAHSVPFSWGTTGLLYNTEVVS----GTPEDWDYLWENQSSLARQITLLDDVRETMGAT 211
Query: 75 A----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
V++ AL + S + A GD+ V + +S D + A
Sbjct: 212 LKSLGYSYNSTDPAEIEEAYERLVEIKPALASFMSFGYEDALFGGDLTVVMAYSVDAISA 271
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI---HQWIEFCLQT 168
+ +VP SG+S+W D IP + +P + ++W+ F L+
Sbjct: 272 TIEDDRMEYIVPASGSSVWTDTMVIPTS---------------APNVDAAYEWMNFMLE- 315
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPG----ELLKGKPSLDTNLIAGVPPAEILARFEF 224
P S SA+ES P +LL + + +L P E+LAR E
Sbjct: 316 -----------PEVSTSAVESLFFATPNAVSLDLLSDEVRNNEDLF---PSDEVLARCEG 361
Query: 225 LEPLSEAT 232
+ P+ +AT
Sbjct: 362 IAPIGDAT 369
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 47/242 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K + + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNQHSVPYLWGTNGIGYNVDKVKAVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDYKKAEEKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRG-LSPL 157
S DV A K+ N+A +PK GA+LW DL AIPA + TK+ + L P
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPADAS-NTKEAHAFINYLLDPQ 295
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ + + A P A+ ++ LV P E+ + LD I+ PP
Sbjct: 296 VIAKVSASVGYANPNP--------AAKQYMDQALVNNP-EVYPSQAVLDKLYISSTPPQS 346
Query: 218 IL 219
I+
Sbjct: 347 IM 348
>gi|387929101|ref|ZP_10131778.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus PB1]
gi|387585919|gb|EIJ78243.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus PB1]
Length = 357
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 96/254 (37%), Gaps = 59/254 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGTV I Y K I W DLW P+ I ++
Sbjct: 117 IDPRFLDLPFDPGNKYSIPYFWGTVGILYNKDILGD---KKITKWNDLWDPDFKNEILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L+ +L +H L+A +GD +
Sbjct: 174 DGAREVMGMGLNSLHYSLNDTNKSHLLEAKEKLDKLTPNIKAIVGDEIRMLMENDEAAIG 233
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQ 160
V WS + N+ VVP+ G++LW D IP A +E H+
Sbjct: 234 VVWSGTAAELMWEKDNLEYVVPEEGSNLWFDNMVIPKTAKNIEAA-------------HK 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILA 220
+I F L A E + ++P+ + L + E++ K P E+ A
Sbjct: 281 FINFMLDPKIAAQ-NTEYVGYSTPN--KEALKYMDKEIVNDK--------RFYPDEEMTA 329
Query: 221 RFEFLEPLSEATLS 234
R E E L + L+
Sbjct: 330 RLEVYENLGKKMLA 343
>gi|386728782|ref|YP_006195165.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
gi|418978655|ref|ZP_13526455.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|379993479|gb|EIA14925.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|384230075|gb|AFH69322.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
Length = 357
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L +++++HLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSYHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 41/188 (21%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRIS 62
LR+ + G + P WGT + Y + ++ EDW+ LW + ELA R++
Sbjct: 138 LRKQFQNPVYDPGNRYSVPLSWGTTGLIYNTEQLKEEP----EDWEYLWQHKQELAKRMT 193
Query: 63 MVNSPREVIGSIAVQLNLALLANQSAHHLKAFG----------------------IGDVW 100
+ + REV+G+ L +L + +A+ GD+
Sbjct: 194 LASDVREVMGAALRMLGYSLNSTNQEQVKQAYEKLVELKPAIASFTTDAWRPQMLTGDLK 253
Query: 101 VAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
VA+ +SSD + + VVPKSG+SLW D IP S +
Sbjct: 254 VAMCYSSDANEVISDNDKLKYVVPKSGSSLWTDTLVIPKGSPNPEAA------------Y 301
Query: 160 QWIEFCLQ 167
+WI F LQ
Sbjct: 302 KWINFMLQ 309
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 36/163 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSP 67
DP + A Y WGT I Y +K ++ AP++ W +++PE+ + + M+++P
Sbjct: 126 DPDNQ-YAINYMWGTTGIGYNVAKVKERMADAPVDSWDLVFKPEILAKFKDCGVMMLDAP 184
Query: 68 REVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVAVGW 105
+++ + L L +N+ S+ ++ A GD+ +AVG+
Sbjct: 185 DDILPAALNYLGLDPNSNKPEDIEKAGALLEKVRPYIQKFHSSEYINALANGDICIAVGY 244
Query: 106 SSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
S D+L A K+ +A +PK GA +W D AIPA ++
Sbjct: 245 SGDILQARSRAEEAKNGQEIAYSLPKQGAQMWFDEMAIPADAK 287
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 43/207 (20%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y K F N + W LW +L +I +++ REV+G L
Sbjct: 132 YSMPYFWGTLGIIYNKKMFPDKNF---DHWDSLWDKDLENQILLIDGAREVMGLGLNSLG 188
Query: 80 LALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPAVKHM 116
+L H ++KA +GD VAV +S + +
Sbjct: 189 YSLNDTNEKHLEEALLKLKKMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEASEMLSEN 247
Query: 117 SNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
+++ V+PK G++LW D IP + K + G HQ+I F L+ A
Sbjct: 248 ADLDYVIPKEGSNLWFDNMVIPKTA----KNVDGA--------HQFINFMLKPENA-AIN 294
Query: 176 QEVIPGASPSALESTLVKLPGELLKGK 202
E + A+P+ ++ + LP E+ + K
Sbjct: 295 AEYVGYATPN--KAAIKLLPKEISQDK 319
>gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
Length = 360
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 63/247 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP + + P+ WGT Y +K + P +DW LW+ + L RI+++N REV+
Sbjct: 132 DPNNR-HSIPFNWGTTGFIYNSAKLKN----PPQDWDYLWQNQELLNRRITLLNDVREVM 186
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G + L + + +A+ GD+ +A+ +S+D
Sbjct: 187 GGVLRMLGYSYNSQDENQIQQAYEKLVELKPAIASFNTDAWQNQLLAGDLTLAMCYSADA 246
Query: 110 L------PAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIE 163
+ P K+ V+P+SG+SLW D IP ++ + G + WI
Sbjct: 247 IRITQENPQFKY-----VIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWIN 289
Query: 164 FCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
+ LQ A Q + A+P+ + +LP + N PP E+L + E
Sbjct: 290 YMLQPDIAASISQR-LSLATPNM--AGFEQLPQNI--------QNNANWFPPQELLEKCE 338
Query: 224 FLEPLSE 230
+ PL +
Sbjct: 339 RIAPLGD 345
>gi|332523341|ref|ZP_08399593.1| putative spermidine/putrescine ABC transporter [Streptococcus
porcinus str. Jelinkova 176]
gi|332314605|gb|EGJ27590.1| putative spermidine/putrescine ABC transporter [Streptococcus
porcinus str. Jelinkova 176]
Length = 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y + KH AP + W+DLWRPE +I +++ RE++G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDQQV-KH--AP-KHWEDLWRPEYKDKIMLIDGAREMLG 181
Query: 73 ------------SIAVQLNLALLANQS---------AHHLKAFGI-GDVWVAVGWS---S 107
QL A QS A +K + I GD + V +S S
Sbjct: 182 IGLTTFGNSVNSKNMNQLKAAEKRLQSLTPNIKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L KH+ VVP G++LW D +P + E
Sbjct: 242 EMLANNKHLH--YVVPTEGSNLWFDNLVLPKTMKHE 275
>gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
Length = 367
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 57/243 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP + + P WGT + Y + P +DWK LW + E++ R +++N REV+
Sbjct: 138 DPANR-YSVPISWGTTGLIYNSRLLKD---VP-QDWKYLWEHQREISKRFTLLNDVREVM 192
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSD- 108
G+ L + + +A+ +GD+ +A+ +S+D
Sbjct: 193 GATLRMLGYSYNSTDPQQIRQAYEKLAELQPAIASFTTDAWRPQIIVGDLLMAMCYSADA 252
Query: 109 --VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
++P + + + PKSG+SLW D IP ++ G +QW+ F L
Sbjct: 253 AEIMPENEDLR--YITPKSGSSLWTDTLVIPKSA---PNPDGA---------YQWMNFML 298
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLE 226
Q A E + A+PS L KLP L+ P+L PP ++ R E L
Sbjct: 299 QPEIAAQVV-ERLSFATPSQL--AFRKLPKS-LRDDPTL-------FPPESVIERSESLA 347
Query: 227 PLS 229
P+S
Sbjct: 348 PIS 350
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y + I+ W LW P+ +I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDK----IDSWNALWNPKYKDQILMVDSQRDAIA 174
Query: 73 SIAVQLNLALLANQSAHHLKA------------FGIGDVW----------VAVGWSSDVL 110
+L ++ KA +GD +AV WS D +
Sbjct: 175 VALKKLGYSINTTNKGELKKAEQELMKQKPLVRAYVGDEVKDLMVDEEGAIAVVWSGDAI 234
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAAS 140
+K+ N+ V+PK G++LW D IP S
Sbjct: 235 TMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS 265
>gi|195978177|ref|YP_002123421.1| spermidine putrescineABC transporter substrate-binding protein PotD
[Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|195974882|gb|ACG62408.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 55/241 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +V+ RE++G
Sbjct: 127 FDPHND-YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYQNSIMLVDGAREILG 181
Query: 73 ------------------SIAVQLNLALLANQS---AHHLKAFGI-GDVWVAVGWS---S 107
+A + AL N A +K + I GD + V +S S
Sbjct: 182 VGLTTFGYSVNSKHLKQLEVAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L H+ VVP G++LW D +P + E + + +I F ++
Sbjct: 242 EMLDNNDHLH--YVVPSEGSNLWFDNLVLPKTMKHEKEA------------YAFINFIMK 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP + +K P+ P E + + E +
Sbjct: 288 PENAAQ-NAEYIGYATPNTKAKAL--LPDD-IKNDPAF-------YPTDETVKKLEVYDN 336
Query: 228 L 228
L
Sbjct: 337 L 337
>gi|229522680|ref|ZP_04412096.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|419836822|ref|ZP_14360262.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
gi|421343638|ref|ZP_15794042.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|421355443|ref|ZP_15805774.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|423736933|ref|ZP_17710051.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|424011196|ref|ZP_17754068.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|229340665|gb|EEO05671.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|395942205|gb|EJH52882.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|395950113|gb|EJH60732.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|408625281|gb|EKK98195.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|408854981|gb|EKL94722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|408857372|gb|EKL97060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
Length = 343
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+V + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEVTLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 277 ENQAEIVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKGEFINDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|410458782|ref|ZP_11312539.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
gi|409931132|gb|EKN68120.1| spermidine:putrescine ABC transporter [Bacillus azotoformans LMG
9581]
Length = 357
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 94/245 (38%), Gaps = 50/245 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGTV I Y + I W DLW P L +I +++ REV+G
Sbjct: 126 FDPENK-YSIPYFWGTVGIVYNPTLLEG---MEITSWNDLWDPALKNQILLIDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDVL 110
L +L H ++A +GD + + WS D
Sbjct: 182 MGLNSLGYSLNDTNKDHLMEAKEKLDRLTPNVKAIVGDEIKMLMANEEAAIGLVWSGDAA 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ N+ VVP+ G++LW D IP + K I HQ+I F L
Sbjct: 242 DIMSENENLDYVVPEEGSNLWFDNMVIPKTA----KNIEAA--------HQFINFMLDPE 289
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A E + ++P+ + L +P +++ + P E+ + E E L
Sbjct: 290 VAAQ-NTEYVSYSTPN--KEALKYMPRDMVTDE--------RFYPSPELTEKLEVYENLG 338
Query: 230 EATLS 234
+ L+
Sbjct: 339 KKNLA 343
>gi|429767047|ref|ZP_19299270.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
gi|429182101|gb|EKY23225.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
Length = 350
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + + PY GT+ I Y K ++ PI+ W+ +W PE I +++S R+ IG
Sbjct: 125 QGNVYSLPYMNGTIGIIYNKDIIKE----PIDSWEAMWSPEYKDEIFVLDSQRDAIGMAL 180
Query: 76 VQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWSSDVLPAV 113
+L ++ + SA ++K I G+ +A+ WS + L
Sbjct: 181 KKLGYSINSTNSAELEEAKKALIEQKELGTIYGADNVKDLMISGERAIAMIWSGEGLTLA 240
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAAS 140
+N+ +VPK GA+ W D IP +
Sbjct: 241 DEYNNLEYIVPKEGANFWIDSLVIPKGT 268
>gi|306831506|ref|ZP_07464664.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426291|gb|EFM29405.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 357
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 31/147 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + AP E W DLW E A I +V+ REV +G++
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGIGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
LN L+ +A +K + I GD + V +S S++L + +
Sbjct: 189 YSLNTKSLSELNAASQKLDDLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNE 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|357635896|ref|ZP_09133771.1| ABC transporter, solute-binding protein [Streptococcus macacae NCTC
11558]
gi|357584350|gb|EHJ51553.1| ABC transporter, solute-binding protein [Streptococcus macacae NCTC
11558]
Length = 356
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 101/262 (38%), Gaps = 68/262 (25%)
Query: 9 DAGEIDP--------RGKICAAPYRWGTVVIAYKK---SKFRKHNLAPIEDWKDLWRPEL 57
D IDP + + PY WGTV I Y K +K KH W DLW E
Sbjct: 113 DLNNIDPLFLGKHFDKHNDYSIPYFWGTVGIVYNKKMLTKIPKH-------WNDLWSKEY 165
Query: 58 AGRISMVNSPREVIG----SIAVQLNLALLAN-QSAHH----------------LKAFGI 96
A I +++ REV+G S+ LN L Q A + +K + I
Sbjct: 166 ANNIMLIDGAREVLGLGLNSLGYSLNTKNLTKLQKAENKLNRLRPNIKAIVGDEIKGYLI 225
Query: 97 -GDVWVAVGWSS---DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVR 152
GD + V +S +VL A K++ VVP G++LW D IP + + +
Sbjct: 226 KGDAPIGVTFSGEAHEVLTANKNLK--YVVPSEGSNLWFDNLVIPKTVKHKQEA------ 277
Query: 153 GLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+ +I F L+ A + I A+P+ L LP + K A
Sbjct: 278 ------YAFINFMLKPENAAR-NAKYIGYATPNVKAKNL--LPAAIKNNK--------AF 320
Query: 213 VPPAEILARFEFLEPLSEATLS 234
P E + R E L + LS
Sbjct: 321 YPDNETIRRLEVYNNLGKKWLS 342
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKF--RKHNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G + PY WGT I Y R P++ W L+ PE+A + IS++++
Sbjct: 118 DP-GAQYSVPYMWGTTGIGYNVGAITERLGEDGPLQSWDLLFDPEIAAQLADCGISVLDA 176
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
P E++ + L L L+A+ S+ ++ G++ +AVG
Sbjct: 177 PVEMVAAALNYLGLDPNSETPEDLEAAEQLIASIRPHIRMFNSSQYISDLANGEICLAVG 236
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA 138
+S DV A + V+P+ GASLW D+ AIPA
Sbjct: 237 YSGDVFIAADRAAEAGQGVEIAYVIPEEGASLWFDMMAIPA 277
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 44/180 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP G + P WGT + Y + ++ EDW LW + ELA R+++ N REV+
Sbjct: 148 DP-GNRYSVPVSWGTTGLIYNSEQLKEEP----EDWDYLWQHKQELAKRMTLANDVREVM 202
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L +L + +A+ GD+ VA+ +SSD
Sbjct: 203 GAALRMLGYSLNSTNQEQVKQAYEKLVELKPAIASFTTDAWRPQMLTGDLKVAMCYSSDA 262
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ + VVPKSG+SLW D IP A E ++WI F LQ
Sbjct: 263 NEVIPDNDKLRYVVPKSGSSLWTDTLVIPKGAPNPEAA-------------YKWINFMLQ 309
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 44/172 (25%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----IS 62
A +DP + PY WGT I Y K AP++ W +++PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNIEKVEAILGKDAPVDSWDLVFKPENMEKLAQCGVG 178
Query: 63 MVNSPREVIGSIAVQLN------------------LALLAN--------QSAHHLKAFGI 96
+N+P E++ A LN LALL + S+ ++
Sbjct: 179 FLNAPSEIM---AASLNYLGKDPNSTKTSDYKKDALALLKDIRPYVTYFHSSQYINDLAN 235
Query: 97 GDVWVAVGWSSDVLPAVKHMSN-------VAVVPKSGASLWADLWAIPAASR 141
GD+ VA+GWS DVL A + +PK GA W DL AIP ++
Sbjct: 236 GDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|336112957|ref|YP_004567724.1| family 1 extracellular solute-binding protein [Bacillus coagulans
2-6]
gi|335366387|gb|AEH52338.1| extracellular solute-binding protein family 1 [Bacillus coagulans
2-6]
Length = 357
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 38/162 (23%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGTV I Y S I W DLW P+L +I +V
Sbjct: 117 IDPRFMDLPFDPGNKYSVPYFWGTVGIVYNSSMLGGKK---ITSWDDLWDPDLKNQILLV 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAH-------------HLKA---------FGIGDVWVA 102
+ REV+G L+ +L H ++KA G+ +
Sbjct: 174 DGAREVMGMGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAIVGDEIKMLLANGEASLG 233
Query: 103 VGWSSD---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
V WS D ++ K ++ VVP G++LW D IP ++
Sbjct: 234 VVWSGDAAEIMSENKKLN--YVVPSEGSNLWFDNMVIPKTAK 273
>gi|209964762|ref|YP_002297677.1| putrescine-binding periplasmic protein PotF [Rhodospirillum
centenum SW]
gi|209958228|gb|ACI98864.1| putrescine-binding periplasmic protein PotF [Rhodospirillum
centenum SW]
Length = 365
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 52/181 (28%)
Query: 24 YRWGTVVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSIA 75
Y+WGT+ I + K ++ +AP + W +++PE A + I +++S +V+ ++
Sbjct: 131 YQWGTIGIGFDTKKIKE--VAPDVSTDSWDMIFKPENAAKLAKCGIVVLDSATDVLPTVF 188
Query: 76 VQLNLALLANQSAH-------------HLKAF--------GIGDVWVAVGWSSDVLPAVK 114
L L +++SA H+KAF GD VA G+S D+ +
Sbjct: 189 HYLGLDPNSDKSADLKKVEETMLAIRPHIKAFVPSVIDPLASGDACVAFGYSGDIFQSAA 248
Query: 115 HMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEFCL 166
V+PK GA +W D+ AIPA A LE H WI F L
Sbjct: 249 RAEEAKAGVEIDYVIPKEGAQVWFDMMAIPANAPNLEAA-------------HTWINFAL 295
Query: 167 Q 167
Q
Sbjct: 296 Q 296
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSEKPEDYKKAEEKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRG-LSPL 157
S DV A K+ N+A +PK GA+LW DL AIPA + TK+ + L P
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPADAG-NTKEAHAFINYLLDPQ 295
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ + + A P A+ ++ LV P E+ + LD I+ PP
Sbjct: 296 VIAKVSASVGYANPNP--------AAKQYMDPELVNNP-EVYPSQEVLDKLYISSTPPQS 346
Query: 218 IL 219
I+
Sbjct: 347 IM 348
>gi|288905425|ref|YP_003430647.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus gallolyticus UCN34]
gi|325978415|ref|YP_004288131.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386337870|ref|YP_006034039.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
gi|288732151|emb|CBI13716.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
gallolyticus UCN34]
gi|325178343|emb|CBZ48387.1| potD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280506|dbj|BAK28080.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
43143]
Length = 357
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 31/147 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + AP E W DLW E A I +V+ REV +G++
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGVGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
LN L+ +A +K + I GD + V +S S++L + +
Sbjct: 189 YSLNTKSLSELNAASQKLDDLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNE 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPENKF-AVPYLWATTGIGYNVEKVKAALGTDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P E+ ++ A +L L L N S+ ++ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VAVGW+ D+L A + NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|457095505|gb|EMG25989.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Streptococcus parauberis KRS-02083]
Length = 357
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
DP+ + PY WGTV I Y + P + W DLWRPE +I +V+ RE +
Sbjct: 126 NFDPQND-YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETM 180
Query: 72 G----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS--- 106
G + LN L+ + A +K + I GD + V +S
Sbjct: 181 GFGLNTFGYSLNEKNLSKLTQVENRLQKLTPNIKAIVADEMKGYMIQGDAGIGVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L + +H+ VVP G++LW D +P +
Sbjct: 241 SEMLYSNEHLH--YVVPSEGSNLWFDNLVLPKTMK 273
>gi|329115776|ref|ZP_08244493.1| putative spermidine/putrescine ABC transporter [Streptococcus
parauberis NCFD 2020]
gi|326906181|gb|EGE53095.1| putative spermidine/putrescine ABC transporter [Streptococcus
parauberis NCFD 2020]
Length = 357
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
DP+ + PY WGTV I Y + P + W DLWRPE +I +V+ RE +
Sbjct: 126 NFDPQND-YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETM 180
Query: 72 G----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS--- 106
G + LN L+ + A +K + I GD + V +S
Sbjct: 181 GFGLNTFGYSLNEKNLSKLTQVENRLQKLTPNIKAIVADEMKGYMIQGDAGIGVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L + +H+ VVP G++LW D +P +
Sbjct: 241 SEMLYSNEHLH--YVVPSEGSNLWFDNLVLPKTMK 273
>gi|333394556|ref|ZP_08476375.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|420145444|ref|ZP_14652910.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402939|gb|EJN56224.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 357
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGT+ I Y N + I+ W DLW P+L I +V+S R+++G
Sbjct: 126 FDPQNR-YSVPYFWGTLGIIYNDQMI---NGSQIQHWNDLWSPKLRNNIMLVDSARDIMG 181
Query: 73 SIAV----QLNLALLANQSAHHLKAFGI------------------GDVWVAVGWSSDVL 110
+ +N +A LK G+ + VAV WS +
Sbjct: 182 MALISQGHSVNTTNIAELEQAKLKLEGLMPNVKAVVADEIKMYMAQNEAAVAVTWSGEAA 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ + S++ VVP G++LW D IP ++
Sbjct: 242 EMMANNSHLHYVVPTEGSNLWFDNLVIPKTAK 273
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR--- 60
L++ND G + PY WGT I Y K ++ + I+ W L+ PE +
Sbjct: 114 LQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQ 167
Query: 61 --ISMVNSPREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGI 96
+SM++S EV ++ + + + S+ ++
Sbjct: 168 CGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITYFHSSKYVSDLAN 227
Query: 97 GDVWVAVGWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGG 149
GD+ VA G+S DV A K+ N+A +PK GA+LW DL AIPA + TK+
Sbjct: 228 GDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPADAS-NTKEAHA 286
Query: 150 RVRG-LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTN 208
+ L P + + + A P A+ ++ LV P E+ + LD
Sbjct: 287 FINYLLDPQVIAKVSASVGYANPNP--------AAKQYMDQALVNNP-EVYPPQEVLDKL 337
Query: 209 LIAGVPPAEIL 219
I+ PP I+
Sbjct: 338 YISTTPPQAIM 348
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 63/261 (24%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WG+ +A + DLW+PEL G++ +
Sbjct: 112 IDPRFTNQSFDPGNGYSVPYMWGSTSLAVNTQVIGGDT---VRKMADLWKPELKGKLLLP 168
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVA 102
N PREV+G L ++ H +AF G+V
Sbjct: 169 NDPREVMGIGLKVLGYSINEKDPEHLRQAFERLQSLMPQVRVFDSDSPKQALLSGEVAAG 228
Query: 103 VGWSSDVLPAVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLI 158
+ W+ + V + N A+ P G SLW D + IP A+ +E
Sbjct: 229 LVWNGEAY--VANNENKAIHYLYPPEGFSLWVDSFCIPKGAAHVEAA------------- 273
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
H++I++ L+ + Q + +SP+A LP E +K P ++ P E
Sbjct: 274 HRFIDYVLRPQVSAIISQS-MGYSSPNA--KVFDFLPAE-MKNNPIVN-------PSVED 322
Query: 219 LARFEFLEPLSEATLSDMSGW 239
AR EFL+ L E TL G+
Sbjct: 323 AARGEFLDSLDEQTLKIYEGY 343
>gi|212640642|ref|YP_002317162.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
gi|212562122|gb|ACJ35177.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus WK1]
Length = 357
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 95/244 (38%), Gaps = 53/244 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + PY WGTV I Y ++ I W DLW P I + + RE+IG
Sbjct: 128 RGNQYSIPYFWGTVGIVYNRALLGGK---EITSWNDLWDPAFKNEILLADGAREIIGMAL 184
Query: 76 VQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDVLPA 112
L+ +L H ++KA +GD + + WS D
Sbjct: 185 NSLHYSLNDTNKTHLQQAKQKLDALTPNVKAI-VGDEIKMLLANEEAAIGIVWSGDAAEI 243
Query: 113 VKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+ + V+PK G +LW D IP + K I G HQ+I F L A
Sbjct: 244 MWENERLDYVIPKEGTNLWFDNMVIPKTA----KNIEGA--------HQFINFMLDPKNA 291
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILA-RFEFLEPLSE 230
E + ++P+ + L LP E+++ + P E LA + E E L +
Sbjct: 292 AQ-NAEYVGYSTPN--KKALEYLPKEVVEDER---------FYPGEKLANKLEVYENLGK 339
Query: 231 ATLS 234
+ L+
Sbjct: 340 SMLA 343
>gi|306833615|ref|ZP_07466742.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|336064370|ref|YP_004559229.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
gi|304424385|gb|EFM27524.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus bovis ATCC
700338]
gi|334282570|dbj|BAK30143.1| spermidine/putrescine transport system substrate-binding protein
[Streptococcus pasteurianus ATCC 43144]
Length = 357
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 31/147 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + AP E W DLW E A I +V+ REV +G++
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYANDIMLVDGAREVMGIGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
LN L+ +A +K + I GD + V +S S++L + +
Sbjct: 189 YSLNTKSLSELNAASQKLDDLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNE 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 55/243 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP + P+ WGT + Y K P EDW+ LWR + L R++++N REV+
Sbjct: 136 DPNNHY-SIPFNWGTTGLLYNSEKLT----TPPEDWEYLWRNQDKLYKRMTLLNDVREVM 190
Query: 72 GSIAVQLNLALLANQSAH-------------HLKAFGI---------GDVWVAVGWSSDV 109
G+ L + + L AF GD+ +A+ +S+D
Sbjct: 191 GATLKMLGYSYNSQNEMEIKQAYEKLLSLKPALAAFDTDAWQNQILAGDLLLAMCYSADG 250
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ K + + V+P+SG+SLW D IP A+ L P + WI L+
Sbjct: 251 IKISKENAKLKYVIPRSGSSLWTDTIVIPKTANNL-------------PGAYSWINLLLK 297
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A + + A+P+ + +LP ++ +TNL PP IL + E + P
Sbjct: 298 PDVAAAISKR-LNIATPN--RAGFEQLPNQIQN-----NTNLF---PPQGILDKCERVTP 346
Query: 228 LSE 230
+ +
Sbjct: 347 IGK 349
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P E+ ++ A +L L L N S+ ++ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VAVGW+ D++ A K+ NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P E+ ++ A +L L L N S+ ++ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VAVGW+ D++ A K+ NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSEKPEDYKKAEEKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRG-LSPL 157
S DV A K+ N+A +PK GA+LW DL AIPA + TK+ + L P
Sbjct: 237 SGDVFRAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPADAG-NTKEAHAFINYLLDPQ 295
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ + + A P A+ ++ LV P E+ + LD I+ PP
Sbjct: 296 VIAKVSASVGYANPNP--------AAKQYMDPELVNNP-EVYPSQEVLDKLYISSTPPQS 346
Query: 218 IL 219
I+
Sbjct: 347 IM 348
>gi|415884924|ref|ZP_11546852.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus MGA3]
gi|387590593|gb|EIJ82912.1| extracellular solute-binding protein family 1 [Bacillus
methanolicus MGA3]
Length = 357
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 34/160 (21%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGTV I Y K I W DLW P+L I ++
Sbjct: 117 IDPRFLNLPFDPGNKYSVPYFWGTVGILYNKDILGD---KKITKWNDLWDPKLKNEILLI 173
Query: 65 NSPREVIGSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVA 102
+ REV+G L+ +L H L+A +GD +
Sbjct: 174 DGAREVMGIGLNSLHYSLNDTNKTHLLEAKEKLDKLTPNIKAIVGDEIRMLMENNEAAIG 233
Query: 103 VGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V WS + N+ VVP+ G++LW D IP ++
Sbjct: 234 VVWSGTAAELMGKKDNLEYVVPEEGSNLWFDNMVIPKTAK 273
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 37/163 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
++DP+ PY WGT I Y K + P+ W ++ PE+AG+ IS+
Sbjct: 117 ADLDPQNN-HMVPYMWGTTGIGYNVDKIKSLLGKDVPVNTWALIFNPEIAGKLASCGISL 175
Query: 64 VNSPREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWV 101
++ EV + + L + AL+A S+ ++ GD+ V
Sbjct: 176 MDDATEVFAAAKIYLGIDASDFSKATQEAVAALVAKTRKNIRYFHSSQYINDLANGDLCV 235
Query: 102 AVGWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIP 137
A G+S DVL A + NVA VP+ GA +W+D+ IP
Sbjct: 236 AHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVMVIP 278
>gi|381205079|ref|ZP_09912150.1| extracellular solute-binding protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 360
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW-RPELAGRISMVNSPREVI 71
DP+ + + PY WGTV I Y+KSK K P + W L+ E +GRI+++NSP E I
Sbjct: 131 FDPK-RAYSMPYMWGTVGIGYRKSKVSK---VP-DSWASLFASSEYSGRIALLNSPSETI 185
Query: 72 --------------GSIAVQLNLALLANQSAHHLKAFG---------IGDVWVAVGWSSD 108
S VQ L+ Q H+K F G+V + + ++ D
Sbjct: 186 PIAMKYLGHSINTADSEVVQTVEDLMIKQK-KHIKVFAEDNGQDLLLSGEVDLTMEYNGD 244
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIP 137
++ + ++A +VPK G LW D IP
Sbjct: 245 IIQVQEEDDDIAYIVPKEGTLLWEDCLCIP 274
>gi|358061149|ref|ZP_09147818.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
simiae CCM 7213]
gi|357256352|gb|EHJ06731.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
simiae CCM 7213]
Length = 357
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP K + PY +GTV I Y K K+ H+ + W+ L+ P+ I +V+ RE++G
Sbjct: 127 DPHNK-YSLPYFFGTVGILYNKEKY-PHD--KFDSWQSLYNPKFKNDILLVDGAREIMGM 182
Query: 74 IAVQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVL 110
+L +L + + H+KA +GD +AV WS
Sbjct: 183 SLNKLGYSL-NDSNPQHIKAAEKDLNHLVPQVRGVVGDEITMMMEQNEGDIAVVWSGVAA 241
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
P V+H + V+PK G++LW D IP ++
Sbjct: 242 PLVQHSNKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|414564078|ref|YP_006043039.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847143|gb|AEJ25355.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 357
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 55/241 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +V+ RE++G
Sbjct: 127 FDPHND-YSIPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYRNSIMLVDGAREILG 181
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWS---S 107
+ +N AL N A +K + I GD + V +S S
Sbjct: 182 VGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L H+ VVP G++LW D +P + E + + +I F ++
Sbjct: 242 EMLDNNDHLH--YVVPSEGSNLWFDNLVLPKTMKHEKEA------------YAFINFIMK 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP + +K P+ P E + + E +
Sbjct: 288 PENAAQ-NAEYIGYATPNTKAKAL--LPDD-VKNDPAF-------YPTDETVKKLEVYDN 336
Query: 228 L 228
L
Sbjct: 337 L 337
>gi|407771361|ref|ZP_11118719.1| extracellular solute-binding protein [Thalassospira xiamenensis M-5
= DSM 17429]
gi|407285580|gb|EKF11078.1| extracellular solute-binding protein [Thalassospira xiamenensis M-5
= DSM 17429]
Length = 367
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS--- 62
N + DP A PY WGT I Y +K ++ + AP++ W ++ P+ A ++S
Sbjct: 116 NQTAKYDPNND-YAVPYLWGTNGIGYNVAKVQEALGDDAPLDSWALVFDPQYAEKLSKCG 174
Query: 63 --MVNSPREVIGSIAVQLN--------------LALLAN--------QSAHHLKAFGIGD 98
M++ P E++ + L+ +A L S+ ++ G+
Sbjct: 175 LTMLDDPGEIVPLVNFYLDKPDSKQSTADIEAAMAELEKIRPYITYFHSSQYINDLANGN 234
Query: 99 VWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAAS---RLETKQIG 148
V V++GWS DV A V+PK G +W D+ IPA + L K I
Sbjct: 235 VCVSIGWSGDVGQAALRAEEAGNGNEIKYVIPKEGTLIWFDVMMIPADAPNPDLAHKFID 294
Query: 149 GRVRG-LSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 185
+R + + ++E+ A+ F E + PG PS
Sbjct: 295 YILRADVGADLANYVEYASPNEAAMEFIDEDLKADPGVYPS 335
>gi|282916352|ref|ZP_06324114.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283770164|ref|ZP_06343056.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
gi|282319792|gb|EFB50140.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283460311|gb|EFC07401.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K K+ + + WK L+ P+ +I +V+ RE+IG
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG-------------IGDVW----------VAVGWSSDVLPA 112
+L L ++++ HLK +GD +AV WS P
Sbjct: 185 NKLGYN-LNDRNSRHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPL 243
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ V+PK G++LW D IP ++
Sbjct: 244 VQEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|422734632|ref|ZP_16790920.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
gi|315168636|gb|EFU12653.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D IP ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVIPKTAK 273
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 38/169 (22%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----IS 62
A +DP + PY WGT I Y K AP++ W+ +++PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNVEKVAAVLGKDAPVDSWELVFKPENMEKLAQCGVG 178
Query: 63 MVNSPREVIG---------------SIAVQLNLALLAN--------QSAHHLKAFGIGDV 99
+N+P E++ S Q LALL S+ ++ GD+
Sbjct: 179 FLNAPSEIMAASLNYLGKDPNSTKTSDYKQDALALLKQVRPYVTYFHSSQYINDLANGDI 238
Query: 100 WVAVGWSSDVLPAVKHMSN-------VAVVPKSGASLWADLWAIPAASR 141
VA+GWS DVL A + +PK GA W DL AIP ++
Sbjct: 239 CVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|227552152|ref|ZP_03982201.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium
TX1330]
gi|257895258|ref|ZP_05674911.1| extracellular solute-binding protein [Enterococcus faecium Com12]
gi|227178734|gb|EEI59706.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium
TX1330]
gi|257831823|gb|EEV58244.1| extracellular solute-binding protein [Enterococcus faecium Com12]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPENQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P ++
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTAK 273
>gi|456370862|gb|EMF49758.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Streptococcus parauberis KRS-02109]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
DP+ + PY WGTV I Y + P + W DLWRPE +I +V+ RE +
Sbjct: 126 NFDPQND-YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETM 180
Query: 72 G----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS--- 106
G + LN L+ + A +K + I GD + V +S
Sbjct: 181 GFGLNTFGYSLNEKNLSKLTQVENRLQKLTPNIKAIVADEMKGYMIQGDAGIGVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L + +H+ VVP G++LW D +P +
Sbjct: 241 SEMLYSNEHLH--YVVPSEGSNLWFDNLVLPKTIK 273
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 43/214 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W +++PE + +SM+++P
Sbjct: 120 DP-GNQYAFPYLWGTTGIGYNPEKVKAALGIDKIDSWDIIFKPENMDKLKSCGVSMLDAP 178
Query: 68 REVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAVGW 105
EV + L L +A S+ ++ G++ VA+GW
Sbjct: 179 EEVYAAALHYLGLNPIAQSVEDVKKAEELLLKVRPDVTYFHSSKYISDLANGNICVALGW 238
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL- 157
S DV A K+ V+ V+PK GA+ + D+ AIPA ++ + L P
Sbjct: 239 SGDVFQAEARAEEAKNGVPVSYVIPKEGAAAFFDMMAIPADAKNADEAYTFLNYILKPEV 298
Query: 158 ---IHQWIEFCLQTARALPFKQEVI---PGASPS 185
I ++ + A A P E I PG P+
Sbjct: 299 IAPISDYVAYPNGNAAATPLVSEEIRNNPGIYPT 332
>gi|227530085|ref|ZP_03960134.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350006|gb|EEJ40297.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus vaginalis
ATCC 49540]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP G + PY WGT+ I Y K ++ W+ LW P L + +++S R+V
Sbjct: 125 DFDP-GNQYSVPYFWGTLGIIYNDQKITGQE---VQHWEQLWSPRLKNNLLLIDSARDVF 180
Query: 72 -------GSIAVQLNLALLANQSAHHLKAFG------IGD----------VWVAVGWSSD 108
G N + L Q+ HHL+A I D V V +S D
Sbjct: 181 AVALITQGKSVNTTNYSQLK-QAQHHLQALTPNVKAIIADEMKMYMEQDEAAVGVTYSGD 239
Query: 109 V--LPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
+ +V H + VVP G+++W D IP +++ KQ +Q+I F L
Sbjct: 240 AREMMSVNHHLHY-VVPSEGSNIWFDNMVIPKSAK--NKQAA----------YQFINFML 286
Query: 167 QTARALPFKQEVIPGASPS 185
Q A E + A+P+
Sbjct: 287 QPENAAK-NAEYVGYATPN 304
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY WG+ I + I WKDL++PE GR+ + + REV I
Sbjct: 120 KGNQYSVPYFWGSTSIGVNAEEIDPKT---ITSWKDLFKPEFKGRLLLTDDVREVF-QIG 175
Query: 76 VQLN-------------------LALLANQSAHHLKA----FGIGDVWVAVGWSSDVLPA 112
+ LN L+AN + A + GDV + + W+ +V A
Sbjct: 176 LALNGHSANTTDEAQIKQAYETLKPLIANTQVFNSDAPRLPYLSGDVDIGMIWNGEVYMA 235
Query: 113 VKHMSNVA-VVPKSGASLWADLWAIPA 138
N+A + PK GA W D +A+P+
Sbjct: 236 NNEGGNLAYIYPKEGAIFWVDSFAVPS 262
>gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
Length = 355
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 41/196 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I +V+ REVIG
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVIG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 180 LSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 287
Query: 170 RALPFKQEVIPGASPS 185
A E I A+P+
Sbjct: 288 NAAQ-NAEYIGYATPN 302
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 53/245 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIAVQLNLA---------------LLA-------NQSAHHLKAFGIGDVWVAVGW 105
EV SI + + LLA S+ ++ GD+ VA G+
Sbjct: 177 DEVFPSILNYMGMDPRSENPEDFKKAEARLLAIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ N+A +PK GA+LW DL A+PA + G
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPADA------------GNPQQA 284
Query: 159 HQWIEFCLQTARALPFKQEV-IPGASPSA---LESTLVKLPGELLKGKPSLDTNLIAGVP 214
H +I + L V +P+A ++ LV P E+ + LD I+ P
Sbjct: 285 HTFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVSNP-EVYPSQAVLDKLYISTTP 343
Query: 215 PAEIL 219
P I+
Sbjct: 344 PQSIM 348
>gi|407478190|ref|YP_006792067.1| extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
gi|407062269|gb|AFS71459.1| Extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
Length = 357
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 59/192 (30%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y + P WKDLW P L +I + + REV+G
Sbjct: 126 FDP-GNRYSIPYFWGTVGIVYNQKLIGGK--KPTS-WKDLWDPALKNQILLADGAREVMG 181
Query: 73 ----SIAVQLNLA-----------------------------LLANQSAHHLKAFGIGDV 99
S+ LN LLAN+ A GIG V
Sbjct: 182 MSLNSLGYSLNETDETKLQAAKANLMKLTPNVKAIVGDEIKLLLANEEA------GIGVV 235
Query: 100 WVAVGWSSDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
W G +++++ ++++ V+PK G+++W D IP + K I G H
Sbjct: 236 W--SGDANEIMSENENLN--YVIPKEGSNVWFDNIVIPKTA----KNIDGA--------H 279
Query: 160 QWIEFCLQTARA 171
Q+I F L+ A
Sbjct: 280 QFINFMLEPKNA 291
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 36/163 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A Y WGT I Y K ++ AP++ W +++PE+ + + M+++P
Sbjct: 126 DP-GNDYAINYMWGTTGIGYNIGKVKERMADAPVDSWDLIFKPEILAKFKDCGVMMLDAP 184
Query: 68 REVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVGW 105
+++ + L L AL+ S+ ++ A GD+ +AVG+
Sbjct: 185 DDILPAALNYLGLDPNSSKPEDIEKAGALMEKVRPFVQKFHSSEYINALANGDICIAVGY 244
Query: 106 SSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
S D+L A K+ + +PK GA +W D AIPA ++
Sbjct: 245 SGDILQARTRAQEAKNGQEIGYSLPKQGAQMWFDEMAIPADAK 287
>gi|374705415|ref|ZP_09712285.1| ABC transporter substrate-binding protein [Pseudomonas sp. S9]
Length = 358
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 37/166 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS------MVN 65
DP G PY WGT I Y K R + P++ W +++PE ++S + N
Sbjct: 113 DP-GNQYGFPYLWGTTGIGYNVDKVRAVLGDDVPLDSWDIIFKPENMKKLSKCGVAILDN 171
Query: 66 SPR------EVIG---------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P +G ++ +Q+ +L S+ ++ GD+ VAVG
Sbjct: 172 GPELLPIALHYLGLPHHSKDPADYKKAEALLLQMRENVLYFHSSKYVSDLANGDICVAVG 231
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLE 143
+S D+L + ++ VVPK GA LW D+ A+PA S+ E
Sbjct: 232 FSGDILQSATRAADANNGVHIDYVVPKEGAPLWFDMVAMPADSKNE 277
>gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein [Paenibacillus sp. JDR-2]
gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
Length = 356
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 49/212 (23%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKK--SKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV 70
DP K + PY WGTV I Y + + H+ W DLW P L +I +++ REV
Sbjct: 126 FDPDNK-YSIPYFWGTVGIVYNPDLTDLKFHS------WNDLWDPSLKNQILLLDGAREV 178
Query: 71 IGSIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSS 107
IG L+ +L H ++KA +GD V + WS
Sbjct: 179 IGMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAI-VGDEIKLLLANEEAAVGLVWSG 237
Query: 108 DVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
D + + VVP+ G++LW D IP + K I G H++I F L
Sbjct: 238 DASEIMSENEKLDYVVPEEGSNLWFDNMVIPKTA----KNIEGA--------HKFINFML 285
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGEL 198
A E + ++P+A L LP E+
Sbjct: 286 DPEHAAQ-NAEYVGYSTPNA--KALEYLPEEI 314
>gi|419955798|ref|ZP_14471920.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967394|gb|EIK51697.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 365
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 46/216 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT+ I Y K + + AP++ W +++PE + +S ++S
Sbjct: 120 DP-GNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSFLDS 178
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
P E++ + L A ++++A KA G+V VA+G
Sbjct: 179 PTEILPAALHYLGYAPDSDKTAELKKAEELFLQIRPHVAYFHSSKYISDLANGNVCVAIG 238
Query: 105 WSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGG----RVR 152
+S D+ A K+ V +PK GA + D+ AIPA A ++ + +
Sbjct: 239 YSGDIYQAKARAEEAKNGVKVGYKIPKEGAGSFFDMVAIPADAKNVDNAHVFINYLLKPE 298
Query: 153 GLSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 185
++P+++ +++F A A P E I PG PS
Sbjct: 299 VMAPIVN-YVQFPSANAAATPLVDEAIRTDPGIYPS 333
>gi|224476217|ref|YP_002633823.1| putative spermidine/putrescine-binding protein PotD [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420824|emb|CAL27638.1| putative spermidine/putrescine-binding protein precursor PotD
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 357
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 98/245 (40%), Gaps = 49/245 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY +GTV I Y K+ + K + W+ L+ P+ I +V+ RE++G
Sbjct: 128 RHNRYSVPYFFGTVGIIYNKNAYPKEDFT---SWRSLYNPKFKNDIILVDGAREIMGMSL 184
Query: 76 VQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDVLPAV 113
+L +L H +A +GD +AV WS P V
Sbjct: 185 NKLGYSLNDTNPKHLQEAENDLNHLAPQVKGVVGDEVTMMLEQHEANIAVVWSGTAAPIV 244
Query: 114 K-HMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
+ H VVPK G++LW D IP ++ + G +Q+I F L A+
Sbjct: 245 QEHPEFNYVVPKEGSNLWFDNMVIPKTAQ---NKEGA---------YQFINFLLD-AQNS 291
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEAT 232
E + A+P+ ++ KLP E+ N P + R E + L +
Sbjct: 292 KQNTEWVGYATPN--KAAAQKLPAEI--------RNDHRFYPTKDTQNRLEVYKDLGKDI 341
Query: 233 LSDMS 237
LSD +
Sbjct: 342 LSDYN 346
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 44/216 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I + K + AP + W ++ P+ + +S +++
Sbjct: 171 DP-GNEHAFPYMWGTTGIGFNPDKVKAVLGADAPTDTWALVFDPKYMSKLSQCGVSFLDA 229
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
P E++ + L L A+L+ S+ ++ GD+ +A+G
Sbjct: 230 PSEILPAALNYLGLNPNSEDPADYAKAEAMLSKVAPYVTYYHSSKYIDDLANGDICIAIG 289
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
+S DVL A V+PK GA +W D+ AIP + + L P
Sbjct: 290 FSGDVLQAATRADEAKNGVQVSYVIPKEGAGMWFDMMAIPVDANNADEAYKFLNYMLEPA 349
Query: 158 ----IHQWIEFCLQTARALPFKQEVI---PGASPSA 186
+ ++ + A A P ++ I PG P+A
Sbjct: 350 NIARVSNFVSYANGNAAATPLVEDAIRNNPGVYPTA 385
>gi|322373437|ref|ZP_08047973.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
gi|321278479|gb|EFX55548.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
Length = 355
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW P+ +I +V+ REVIG
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPDYKDQIMLVDGAREVIG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ N+ VVP G++LW D IP +
Sbjct: 240 EMLDKNENLRYVVPSEGSNLWFDNLVIPKTVK 271
>gi|225868489|ref|YP_002744437.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. zooepidemicus]
gi|225701765|emb|CAW99154.1| spermidine/putrescine extracellular binding protein [Streptococcus
equi subsp. zooepidemicus]
Length = 357
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 96/241 (39%), Gaps = 55/241 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K P+ W+DLWRPE I +V+ RE++G
Sbjct: 127 FDPHND-YSIPYFWGTVGIVYNDQLVDK---TPMH-WEDLWRPEYQNSIMLVDGAREILG 181
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWS---S 107
+ +N AL N A +K + I GD + V +S S
Sbjct: 182 VGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
++L H+ VVP G++LW D +P + E + + +I F ++
Sbjct: 242 EMLDNNDHLH--YVVPSEGSNLWFDNLVLPKTMKHENEA------------YAFINFIMK 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I A+P+ L LP + +K P+ P E + + E +
Sbjct: 288 PENAAQ-NAEYIGYATPNTKAKAL--LPDD-VKNDPAF-------YPTDETVKKLEVYDN 336
Query: 228 L 228
L
Sbjct: 337 L 337
>gi|422758812|ref|ZP_16812574.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411647|gb|EFY02555.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 357
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 91/245 (37%), Gaps = 50/245 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y + W DLW P L I V+ RE++G
Sbjct: 126 FDP-GNQYSVPYFWGTVGIVYNPTMLDGKEFTS---WNDLWDPSLKNEIIFVDGAREIMG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDVL 110
L +L H ++A +GD + + WS D
Sbjct: 182 MGLNSLGYSLNDTNLDHLMEAKDKLIKLTPNVKAIVGDEGKVLIQNREAAIGIVWSGDAA 241
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + K I G HQ+I F L
Sbjct: 242 DIMWENEDLNYVVPSEGSNLWFDNMVIPKTA----KNIDGA--------HQFINFMLDAE 289
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A E + ++P+ + L +P +++ + P E+ + E E L
Sbjct: 290 IAAQ-NTEYVSYSTPN--KEALQYMPEDMVTDE--------RFYPSPELTEKLEVYENLG 338
Query: 230 EATLS 234
+ L+
Sbjct: 339 KKNLA 343
>gi|170725493|ref|YP_001759519.1| extracellular solute-binding protein [Shewanella woodyi ATCC 51908]
gi|169810840|gb|ACA85424.1| extracellular solute-binding protein family 1 [Shewanella woodyi
ATCC 51908]
Length = 366
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 50/215 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G + PY WGT I Y + K ++ AP + + L+ P+ A ++S M++S
Sbjct: 121 DP-GNEYSVPYLWGTTGIGYNEGKVKEILGEDAPTDSLELLFNPKYAEKLSKCGLSMLDS 179
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
E++ V L L +N A + KA GD+ VA G
Sbjct: 180 ADEMLPMALVYLGLDPNSNSKADYKKAGEVLDKVRPFVTYFHSSRYITDLANGDICVAFG 239
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
+S DV A +PK GA+LW D+ AIPA + V+
Sbjct: 240 YSGDVFQAAARAEEAENGQVIGYSIPKEGANLWFDMLAIPADA--------ANVKN---- 287
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLV 192
H +I + L+ P + + A+P+A TLV
Sbjct: 288 AHTFINYILRPEVIAPI-TDYVAYANPNAAAETLV 321
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 58/254 (22%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR--- 60
L++ND G + PY WGT I Y K ++ + I+ W L+ PE +
Sbjct: 114 LQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQ 167
Query: 61 --ISMVNSPREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGI 96
+SM++S EV ++ + + + S+ ++
Sbjct: 168 CGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITYFHSSKYVSDLAN 227
Query: 97 GDVWVAVGWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGG 149
GD+ VA G+S DV A K+ N+A +PK GA+LW DL AIPA + TK+
Sbjct: 228 GDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPADAS-NTKE--- 283
Query: 150 RVRGLSPLIHQWIEFCLQTARALPFKQEV-IPGASPSA---LESTLVKLPGELLKGKPSL 205
H +I + L V +PSA ++ LV P E+ + L
Sbjct: 284 --------AHAFINYLLDPQVIAKVSASVGYANPNPSAKQYMDPELVNNP-EVYPPQEVL 334
Query: 206 DTNLIAGVPPAEIL 219
D I+ PP I+
Sbjct: 335 DKLYISTTPPQAIM 348
>gi|417927022|ref|ZP_12570410.1| ABC transporter, solute-binding protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|340764896|gb|EGR87422.1| ABC transporter, solute-binding protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|333904886|ref|YP_004478757.1| spermidine/putrescine extracellular binding protein [Streptococcus
parauberis KCTC 11537]
gi|333120151|gb|AEF25085.1| spermidine/putrescine extracellular binding protein [Streptococcus
parauberis KCTC 11537]
Length = 284
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
DP+ + PY WGTV I Y + P + W DLWRPE +I +V+ RE +
Sbjct: 53 NFDPQND-YSIPYFWGTVGIVYNDQIIKN----PPKHWIDLWRPEYKNQIMLVDGARETM 107
Query: 72 G----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS--- 106
G + LN L+ + A +K + I GD + V +S
Sbjct: 108 GFGLNTFGYSLNEKNLSKLTQVENRLQKLTPNIKAIVADEMKGYMIQGDAGIGVTFSGEA 167
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L + +H+ VVP G++LW D +P +
Sbjct: 168 SEMLYSNEHLH--YVVPSEGSNLWFDNLVLPKTIK 200
>gi|408401530|ref|YP_006859493.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
gi|407967758|dbj|BAM60996.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|427708603|ref|YP_007050980.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427361108|gb|AFY43830.1| extracellular solute-binding protein family 1 [Nostoc sp. PCC 7107]
Length = 360
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 54/234 (23%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSIAVQLNL 80
P+ WGT + Y + AP EDW LW+ + L R++++N REV+G++ L
Sbjct: 140 PFNWGTTGLIYNSEVLQT---AP-EDWDYLWQNQSILNKRMTLLNDVREVMGAVLRMLGY 195
Query: 81 ALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDVLPAVKHMSN 118
+ + + +A+ GD+ +A+ +S+D + +K
Sbjct: 196 SYNSKEEEELKQAYNKLQQLKPAIASFDTDAWQNQILSGDLVLAMCYSADAIRVIKENPK 255
Query: 119 VA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQE 177
V+P+SG+SLW D +P ++ I G + WI F LQ A Q
Sbjct: 256 FKYVIPRSGSSLWTDTIVVPKSA----PNIDG--------AYAWINFILQPEVAAIISQN 303
Query: 178 V-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ I + + E +LP +L K NL P A +L + E + PL +
Sbjct: 304 LNISTPNGAGFE----QLPKKLQDNK-----NLF---PEAALLEKCERITPLGD 345
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGT+ I Y + I+ W DLWRPE +I +V+S R+++
Sbjct: 132 DFDPKN-TYSLPYFWGTLGIVYNDQMVDGN---KIKTWNDLWRPEFKKKIMLVDSARDIL 187
Query: 72 GSIAVQ-------LNLALLANQS--------------AHHLKAF-GIGDVWVAVGWS--- 106
G V NL LA A +K + + +AV +S
Sbjct: 188 GMTLVSNGASVNTKNLPELAAADGKLATLMPNVKAIVADEIKMYMAQNEAAIAVDYSGNA 247
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++++ +H+ VVPK G +LW D + IP R
Sbjct: 248 AEMMSRNEHLQ--YVVPKEGGNLWLDNFVIPKTVR 280
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-------ISMVNSP 67
G + PY WGT I Y + + + AP++ W L+ PE+ ISM++S
Sbjct: 122 GSRYSIPYMWGTNGIGYNVERVTEILGDDAPLDSWALLFDPEITTALRQGGCGISMLDSG 181
Query: 68 REVIGSIAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGW 105
E++ L L+ L+ ++A ++ GD+ VA G+
Sbjct: 182 DEMLSPAMAYLGLSPLSEETADLEAAGDLIAAVRDNITYFHSSRYISDLANGDICVAAGY 241
Query: 106 SSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA 138
S D+ A ++PK GA+LW D+ AIPA
Sbjct: 242 SGDIFQAADRAEEAGRDFTIDYIIPKEGAALWFDMMAIPA 281
>gi|340355152|ref|ZP_08677844.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Sporosarcina newyorkensis
2681]
gi|339622592|gb|EGQ27107.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Sporosarcina newyorkensis
2681]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 39/198 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ IAY S E W+ LW L ++ +V+S REV+G
Sbjct: 126 FDPQNK-YSIPYFWGTLGIAYNPSLLDGQTF---ESWESLWDASLRQKVILVDSAREVLG 181
Query: 73 ----SIAVQLNLALLA--NQSAHHLKAFG------IGD----------VWVAVGWSSDVL 110
S LN L ++ L+ G IGD VA+ WS
Sbjct: 182 VALNSFGYSLNSTSLQELKEATDKLETMGPNVKAVIGDEVTQLMINNEASVALTWSGQAA 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH--------QW 161
+ ++ +VP+ G++LW D IP + I G + ++ ++ ++
Sbjct: 242 DMISENEDIDYIVPEEGSNLWFDNIVIPRTAT----NIEGAYKFINFMLDPEVAAQNAEY 297
Query: 162 IEFCLQTARALPFKQEVI 179
+ + +AL F E I
Sbjct: 298 VGYSTPNVKALSFMDEEI 315
>gi|311032173|ref|ZP_07710263.1| spermidine/putrescine import ABC transporter,
spermidine/putrescine-binding protein PotD [Bacillus sp.
m3-13]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 87/253 (34%), Gaps = 66/253 (26%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGTV I Y S I W DLW +L I +++ REV+G
Sbjct: 126 FDPKNK-YSVPYFWGTVGIVYNPSMLDGKE---ITSWNDLWDEDLKNEILLIDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAHHLKA---------------------------FGIGDVWVAVG- 104
L +L H L+A IG VW V
Sbjct: 182 MALNSLGYSLNDTDQEHLLEAKRKLDTLTPNIKAIVGDENRMLIENEEAAIGLVWSGVAA 241
Query: 105 ---WSSDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
W ++ L V VP G++LW D IP ++ V HQ+
Sbjct: 242 ELMWENEDLEYV--------VPVEGSNLWFDNMVIPKTAK--------NVEA----AHQF 281
Query: 162 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILAR 221
I F L+ A E S S + L E L G PP E+ +
Sbjct: 282 INFMLEAEVA----AENTDYVSYSTPNKAAMPLLDEELTGDERF-------YPPPELTEK 330
Query: 222 FEFLEPLSEATLS 234
E E L + L+
Sbjct: 331 LEVYENLGKRNLA 343
>gi|398854682|ref|ZP_10611228.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398235060|gb|EJN20915.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGWSSDVLP 111
L + +AH ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDKDTAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 ----AVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIE 163
AV+ +NV + +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEITN 305
Query: 164 ---FCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
+ A A P E I PG+ PS A+ +TL +P +
Sbjct: 306 SNGYSNANAAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|402312720|ref|ZP_10831644.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
gi|400369178|gb|EJP22181.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
Length = 363
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 34/161 (21%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 69
A DP K A PY WGTV I Y S I W DLW P+ G I M +S R+
Sbjct: 126 AKSFDPENK-YAVPYTWGTVGILYNTSMVDDE----ITSWSDLWNPKYQGNILMQDSVRD 180
Query: 70 VIGSIAVQLNLALLANQSAH-------------HLKAFGI---------GDVWVAVGWSS 107
L ++ A ++A+ I G+ + V +S
Sbjct: 181 AFMVGEKMLGYSMNTTDKAELEKVKEKLIEQKPLVQAYVIDQVRDKMIGGEAAIGVIYSG 240
Query: 108 DVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
++L ++N V+PK G +LW D W IP ++
Sbjct: 241 EMLYVQNEVANSGEDFELKYVIPKEGTNLWIDAWVIPKNAK 281
>gi|392987511|ref|YP_006486104.1| spermidine/putrescine ABC transporter substrate-binding protein
[Enterococcus hirae ATCC 9790]
gi|392334931|gb|AFM69213.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus hirae ATCC 9790]
Length = 359
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGT+ I Y F K I+ W DLW+P+L + +++ REV+
Sbjct: 125 DFDPQN-TYSIPYFWGTLGIVYNDKVFNKE---EIQHWNDLWKPKLRDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQ-----------SAHHLKAFGIG-DVWVAVGWS--- 106
G S+ LN L A++ A +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKEMDQLNAAADKLNKLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P ++
Sbjct: 241 ADMMSENEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|251782280|ref|YP_002996582.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242390909|dbj|BAH81368.1| spermidine/putrescine extracellular binding protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|398989313|ref|ZP_10692655.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399016316|ref|ZP_10718539.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398105497|gb|EJL95590.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398147975|gb|EJM36667.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGWSSDVLP 111
L + +AH ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDKDTAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 ----AVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIE 163
AV+ +NV + +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEITN 305
Query: 164 ---FCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
+ A A P E I PG+ PS A+ +TL +P +
Sbjct: 306 SNGYSNANAAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|339482351|ref|YP_004694137.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
gi|338804496|gb|AEJ00738.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
Length = 371
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 58/251 (23%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPR 68
DP K + PY + ++ + +K ++ L P + W ++ PE + GR+++++SPR
Sbjct: 130 FDPTNK-YSVPYAYTLTLLGFNTNKVQELGL-PTDTWAIIFEPEYLQKIKGRVTVLDSPR 187
Query: 69 EVIGSIAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGWS 106
E++ + + L A H +++ IGD+WV G+S
Sbjct: 188 ELMAAALLYLGYAANDQDEVHWNQAKELIIRAKPYWAAFSNTSYIREIAIGDLWVVHGYS 247
Query: 107 SDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
+D+ A +H + +PK GA + D + + G+ GL+ H
Sbjct: 248 NDLFQAALDAKKTGRHFTIDYAIPKQGAVMSLDSMVLHKS---------GKHPGLA---H 295
Query: 160 QWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
Q+I F L + +I +P+ ++ ELL+ K P E L
Sbjct: 296 QFINFMLDGKNSAELTN-LIGSGNPNIDAKPFIR--PELLQNK--------VIFPDEESL 344
Query: 220 ARFEFLEPLSE 230
+R E + L+
Sbjct: 345 SRLEMITDLNH 355
>gi|425055129|ref|ZP_18458617.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 505]
gi|403034531|gb|EJY45974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 505]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P ++
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTAK 273
>gi|410494614|ref|YP_006904460.1| putrescine-binding periplasmic protein [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|417753098|ref|ZP_12401247.1| putative spermidine/putrescine ABC transporter [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|333770877|gb|EGL47862.1| putative spermidine/putrescine ABC transporter [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|410439774|emb|CCI62402.1| Putrescine-binding periplasmic protein Flags: Precursor
[Streptococcus dysgalactiae subsp. equisimilis AC-2713]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREILG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|384513985|ref|YP_005709078.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|430358128|ref|ZP_19425232.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|430366431|ref|ZP_19427499.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
gi|327535874|gb|AEA94708.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|429513934|gb|ELA03508.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|429517073|gb|ELA06542.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN------LALLA---NQSAHHLKAFGIGDV---------WVAVGWS---S 107
S+ LN L L N+ +++KA ++ VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|422707167|ref|ZP_16764864.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN------LALLA---NQSAHHLKAFGIGDV---------WVAVGWS---S 107
S+ LN L L N+ +++KA ++ VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|389820015|ref|ZP_10209562.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
gi|388463070|gb|EIM05445.1| spermidine/putrescine-binding periplasmic protein [Planococcus
antarcticus DSM 14505]
Length = 358
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV IA+ + E W DLW P L + +V+S REVIG
Sbjct: 126 FDP-GNEYSVPYFWGTVGIAFNPTLLEGQTF---ESWDDLWDPTLQQEVILVDSAREVIG 181
Query: 73 ----SIAVQLNLALLAN--QSAHHLKAFG------IGD----------VWVAVGWSSDVL 110
S+ LN + ++ LK G IGD VA+ WS
Sbjct: 182 MGLNSLGYSLNSTDMDELREATDKLKTLGPNVKAIIGDEIVEMMRREEAAVALTWSGQAA 241
Query: 111 PAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ ++ VP+ G++LW D IP + V G H +I F L
Sbjct: 242 DMMWINEDIDYSVPEEGSNLWFDNMIIPKTAD--------NVEG----AHAFINFMLD 287
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + PY+WGTV +A +K ++ PI W+DLW P GR+ +++ EV+G
Sbjct: 127 DPDNRYTV-PYQWGTVGLAVDTAKVKR----PISRWEDLWDPAFKGRVVLLDDEFEVLGM 181
Query: 74 IAVQLNL-------ALLANQSAH------HLKAFG---------IGDVWVAVGWSSDVLP 111
L A LA A ++K F G+VW+ W+ +
Sbjct: 182 ALQTLGFDKNTKDPAQLAKARAKLAQLRPNIKLFDSDSPKTALLSGEVWLGQVWNGEA-- 239
Query: 112 AVKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A+ N A+ P G +W D WA+P + + + +SP E +
Sbjct: 240 ALAQRENPAIRYLCPAEGCGIWHDNWAVPKGAPHKDAALAFIDYTMSP------EAGIMI 293
Query: 169 ARALPFKQ------EVIPGASPSALESTLVKLPG 196
+A P+ E++ A P L ST + P
Sbjct: 294 TQAFPYSNPNRAALELLKKADPK-LYSTYMASPA 326
>gi|384423359|ref|YP_005632718.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
gi|327486067|gb|AEA80473.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
Length = 343
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 277 ENQAEIVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKGEFINDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
Length = 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y KF + + I+ W DLW PEL + +++ RE+IG
Sbjct: 126 FDPSNQF-SIPYFWGTLGIIYN-DKFVEED--AIQHWDDLWNPELKNEVMLIDGAREIIG 181
Query: 73 ----SIAVQLN------LALLANQ-----------SAHHLKAFGIGD-VWVAVGWSSDVL 110
S LN LA A + A +K + I + VAV +S +
Sbjct: 182 LALDSEGNSLNSKEDDQLAAAAKKLSGLTPNVKAIVADEIKMYMIQEEASVAVTFSGEAS 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ N+ V+P G++LW D + IP ++
Sbjct: 242 EMLYENENLHYVIPSEGSNLWFDNFVIPKTAK 273
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 30/153 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G+ Y+WGT + + + PI W DLW+P+LAG+I + PR+ I
Sbjct: 80 FDPGGRHSIV-YQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTIN 134
Query: 73 SIAVQLNLAL-------------LANQSAHHLKAFGIGDV-----------WVAVGWSSD 108
+ L ++ A + AH + GD VA+GW+ D
Sbjct: 135 VLLKSLGYSINTTDPGQLAVARERAAELAHRVTLTQEGDEVVTPYLLSDEHVVALGWTYD 194
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
A N+A ++P G LW D + IP S
Sbjct: 195 AFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 227
>gi|199597310|ref|ZP_03210741.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
rhamnosus HN001]
gi|229551819|ref|ZP_04440544.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus rhamnosus
LMS2-1]
gi|258507967|ref|YP_003170718.1| ABC transporter spermidine/putrescine-binding protein
[Lactobacillus rhamnosus GG]
gi|258539220|ref|YP_003173719.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus rhamnosus Lc 705]
gi|385827649|ref|YP_005865421.1| spermidine/putrescine ABC transporter substrate binding component
[Lactobacillus rhamnosus GG]
gi|385834878|ref|YP_005872652.1| bacterial extracellular solute-binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|421769417|ref|ZP_16206124.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus rhamnosus LRHMDP2]
gi|421772300|ref|ZP_16208956.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus rhamnosus LRHMDP3]
gi|199591826|gb|EDY99901.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
rhamnosus HN001]
gi|229314763|gb|EEN80736.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus rhamnosus
LMS2-1]
gi|257147894|emb|CAR86867.1| ABC transporter, spermidine/putrescine-binding protein
[Lactobacillus rhamnosus GG]
gi|257150896|emb|CAR89868.1| ABC transporter, spermidine/putrescine-binding protein
[Lactobacillus rhamnosus Lc 705]
gi|259649294|dbj|BAI41456.1| spermidine/putrescine ABC transporter substrate binding component
[Lactobacillus rhamnosus GG]
gi|355394369|gb|AER63799.1| bacterial extracellular solute-binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|411183868|gb|EKS51003.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus rhamnosus LRHMDP3]
gi|411184548|gb|EKS51680.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Lactobacillus rhamnosus LRHMDP2]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV- 70
E DP K + PY WGT+ I Y KF N + ++ W LW P+ I +++S R+V
Sbjct: 125 EFDPNNK-YSIPYFWGTLGIIYN-DKFV--NASEVQHWNQLWNPKFKDSIMLIDSARDVF 180
Query: 71 ------IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS--- 106
+G + N LA +Q + ++KA + +AV WS
Sbjct: 181 APALISLGKSVNETNPQTLAVAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L KH+ VVP+ G++LW D IP ++
Sbjct: 241 SEMLANNKHLH--YVVPQEGSNLWFDNLVIPKTAK 273
>gi|354806808|ref|ZP_09040288.1| bacterial extracellular solute-binding family protein
[Lactobacillus curvatus CRL 705]
gi|354514783|gb|EHE86750.1| bacterial extracellular solute-binding family protein
[Lactobacillus curvatus CRL 705]
Length = 355
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI- 71
DP G + PY WGT+ I Y +K P+ W DLW P+ G+I +V+S R+++
Sbjct: 126 FDP-GNKYSLPYFWGTLGIIYNDQLVKK----PLTHWSDLWSPDYRGQIMVVDSARDMMA 180
Query: 72 ------GSIAVQLNLALLA------NQSAHHLKAFGIGDVW---------VAVGWSSDVL 110
G N A+L +Q A ++KA ++ VAV WS +
Sbjct: 181 VGLIENGQSVNSTNPAVLKAAKDKLDQMAPNVKAIVADEIKMYMVQNEASVAVTWSGEAA 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLE 143
+ + ++ V+P+ G++LW D IP ++ E
Sbjct: 241 EMLDNNPHLHYVIPEEGSNLWFDNLVIPKTAKHE 274
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNAHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIA----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I +Q+ + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDFKKAEAKLLQIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAVKHMS------NVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A N+A +PK GA+LW DL AIPA + + L P +
Sbjct: 237 SGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPADASNPKEAHAFINYLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P A+ ++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSASVGYANPNP--------AAKQYMDPELVSNP-EVYPSQAVLDKLYISTTPPQSI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|147672269|ref|YP_001214973.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227120303|ref|YP_002822198.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262168935|ref|ZP_06036629.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
gi|146314652|gb|ABQ19192.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227015753|gb|ACP11962.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262022634|gb|EEY41341.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
Length = 343
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 277 ENQAEIVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKSEFINDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|418070260|ref|ZP_12707535.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
rhamnosus R0011]
gi|423078990|ref|ZP_17067665.1| putative spermidine/putrescine ABC transporter [Lactobacillus
rhamnosus ATCC 21052]
gi|357539680|gb|EHJ23697.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
rhamnosus R0011]
gi|357548447|gb|EHJ30311.1| putative spermidine/putrescine ABC transporter [Lactobacillus
rhamnosus ATCC 21052]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV- 70
E DP K + PY WGT+ I Y KF N + ++ W LW P+ I +++S R+V
Sbjct: 125 EFDPNNK-YSIPYFWGTLGIIYN-DKFV--NASEVQHWNQLWNPKFKDSIMLIDSARDVF 180
Query: 71 ------IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS--- 106
+G + N LA +Q + ++KA + +AV WS
Sbjct: 181 APALISLGKSVNETNPQTLAVAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L KH+ VVP+ G++LW D IP ++
Sbjct: 241 SEMLANNKHLH--YVVPQEGSNLWFDNLVIPKTAK 273
>gi|347751388|ref|YP_004858953.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
gi|347583906|gb|AEP00173.1| extracellular solute-binding protein family 1 [Bacillus coagulans
36D1]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 33/155 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y S I W DLW P+L +I +V+ REV+G
Sbjct: 126 FDPKNR-YSVPYFWGTVGIVYNSSMLGGKK---ITSWDDLWDPDLKNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSD- 108
L+ +L H ++KA +GD + V WS D
Sbjct: 182 MGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAI-VGDEIKMLLANEEASLGVVWSGDA 240
Query: 109 --VLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++ K ++ VVP G++LW D IP ++
Sbjct: 241 AEIMSENKKLN--YVVPSEGSNLWFDNMVIPKTAK 273
>gi|15601861|ref|NP_233492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121585940|ref|ZP_01675733.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121728505|ref|ZP_01681529.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|153212814|ref|ZP_01948450.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|153801275|ref|ZP_01955861.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|153816688|ref|ZP_01969355.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|153821212|ref|ZP_01973879.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|153827835|ref|ZP_01980502.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|227812675|ref|YP_002812685.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229506817|ref|ZP_04396326.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229510388|ref|ZP_04399868.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229514518|ref|ZP_04403979.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229517481|ref|ZP_04406926.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229528004|ref|ZP_04417395.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229605291|ref|YP_002875995.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254224635|ref|ZP_04918251.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|254284731|ref|ZP_04959698.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|254850268|ref|ZP_05239618.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255746164|ref|ZP_05420111.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262158653|ref|ZP_06029767.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262192301|ref|ZP_06050456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297579852|ref|ZP_06941779.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|298499871|ref|ZP_07009677.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|360038005|ref|YP_004939767.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|379744487|ref|YP_005335539.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|417812053|ref|ZP_12458714.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|417816647|ref|ZP_12463277.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|417819582|ref|ZP_12466197.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|417822919|ref|ZP_12469517.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|418330651|ref|ZP_12941630.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|418337546|ref|ZP_12946441.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|418342192|ref|ZP_12949021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|418349219|ref|ZP_12953951.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|418353640|ref|ZP_12956365.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|419825948|ref|ZP_14349451.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|421317308|ref|ZP_15767878.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|421323930|ref|ZP_15774457.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|421326900|ref|ZP_15777418.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|421331989|ref|ZP_15782468.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|421335622|ref|ZP_15786085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|421341430|ref|ZP_15791850.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|421345945|ref|ZP_15796329.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|421349691|ref|ZP_15800060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|422890025|ref|ZP_16932485.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|422899504|ref|ZP_16936216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|422904982|ref|ZP_16939869.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|422915324|ref|ZP_16949773.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|422921232|ref|ZP_16954482.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|422927985|ref|ZP_16960929.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|423147058|ref|ZP_17134546.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|423148048|ref|ZP_17135426.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|423151833|ref|ZP_17139064.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|423158457|ref|ZP_17145470.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|423162262|ref|ZP_17149134.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|423163362|ref|ZP_17150178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|423733226|ref|ZP_17706467.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|423743369|ref|ZP_17710868.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|423910611|ref|ZP_17728599.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|423919682|ref|ZP_17729512.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|423952923|ref|ZP_17734314.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|423981448|ref|ZP_17737678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|424002295|ref|ZP_17745380.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|424004539|ref|ZP_17747545.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|424022471|ref|ZP_17762154.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|424029250|ref|ZP_17768801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|424588741|ref|ZP_18028237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|424590579|ref|ZP_18030015.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|424593489|ref|ZP_18032848.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|424597418|ref|ZP_18036635.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|424603159|ref|ZP_18042293.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|424604995|ref|ZP_18043982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|424608821|ref|ZP_18047699.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|424615603|ref|ZP_18054319.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|424619448|ref|ZP_18058053.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|424620361|ref|ZP_18058909.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|424642988|ref|ZP_18080766.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|424651102|ref|ZP_18088648.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|424654885|ref|ZP_18092203.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|429887818|ref|ZP_19369324.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|440711255|ref|ZP_20891896.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443505848|ref|ZP_21072735.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443509756|ref|ZP_21076449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443513580|ref|ZP_21080150.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443517413|ref|ZP_21083858.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443521071|ref|ZP_21087402.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443521975|ref|ZP_21088250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443530004|ref|ZP_21096021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443533700|ref|ZP_21099641.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443537371|ref|ZP_21103229.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|449057568|ref|ZP_21735864.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
gi|9658560|gb|AAF97004.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121549876|gb|EAX59896.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121629223|gb|EAX61661.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|124116327|gb|EAY35147.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|124123190|gb|EAY41933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|125622698|gb|EAZ51016.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|126512707|gb|EAZ75301.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|126521271|gb|EAZ78494.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|148876680|gb|EDL74815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|150425516|gb|EDN17292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|227011817|gb|ACP08028.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229334366|gb|EEN99851.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229345517|gb|EEO10490.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229348498|gb|EEO13456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229352833|gb|EEO17773.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229357168|gb|EEO22086.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229371777|gb|ACQ62199.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254845973|gb|EET24387.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255735918|gb|EET91316.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262029533|gb|EEY48183.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262031794|gb|EEY50377.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297535498|gb|EFH74332.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|297541852|gb|EFH77903.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|340039797|gb|EGR00770.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|340040440|gb|EGR01412.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|340044873|gb|EGR05821.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|340049049|gb|EGR09965.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|341627361|gb|EGS52678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|341628863|gb|EGS54056.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|341628994|gb|EGS54178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|341632302|gb|EGS57173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|341642870|gb|EGS67170.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|341649542|gb|EGS73510.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|356416981|gb|EHH70601.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|356423906|gb|EHH77334.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|356424646|gb|EHH78048.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|356430930|gb|EHH84135.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|356435420|gb|EHH88576.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|356437028|gb|EHH90138.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|356439650|gb|EHH92617.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|356440748|gb|EHH93686.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|356446081|gb|EHH98881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|356454705|gb|EHI07352.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|356456994|gb|EHI09570.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|356649159|gb|AET29213.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|378797081|gb|AFC60551.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|395919766|gb|EJH30589.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|395921944|gb|EJH32763.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|395930787|gb|EJH41533.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|395933825|gb|EJH44564.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|395935304|gb|EJH46039.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|395937262|gb|EJH47982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|395947472|gb|EJH58127.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|395950778|gb|EJH61394.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|395956308|gb|EJH66902.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|395965920|gb|EJH76058.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|395966528|gb|EJH76647.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|395968101|gb|EJH78091.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|395973397|gb|EJH82958.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|395977877|gb|EJH87271.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|408005613|gb|EKG43812.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|408011780|gb|EKG49583.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|408034337|gb|EKG70840.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|408039155|gb|EKG75449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|408046209|gb|EKG81910.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|408048133|gb|EKG83590.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|408058880|gb|EKG93659.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|408608738|gb|EKK82121.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|408615804|gb|EKK88979.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|408645801|gb|EKL17435.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|408649720|gb|EKL21033.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|408659668|gb|EKL30703.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|408661555|gb|EKL32540.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|408665384|gb|EKL36200.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|408847776|gb|EKL87837.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|408850875|gb|EKL90818.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|408872205|gb|EKM11428.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|408876720|gb|EKM15830.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|429225135|gb|EKY31411.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|439972742|gb|ELP48985.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443429830|gb|ELS72453.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443433792|gb|ELS80006.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443437751|gb|ELS87534.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443441572|gb|ELS94940.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443445504|gb|ELT02225.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443452118|gb|ELT12347.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443459574|gb|ELT26968.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443463176|gb|ELT34186.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443467380|gb|ELT42036.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|448263177|gb|EMB00424.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
Length = 343
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 277 ENQAEIVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKGEFINDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum
255-15]
gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium
sibiricum 255-15]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 66/200 (33%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR G + PY WGTV I Y + P WKD+W P L +I +
Sbjct: 117 IDPRFLDLSFDPGNKYSIPYFWGTVGIVYNQKLIDGK--KPTS-WKDIWDPALKNQILLA 173
Query: 65 NSPREVIG----SIAVQLNLA-----------------------------LLANQSAHHL 91
+ REV+G S+ LN LLAN+ A
Sbjct: 174 DGAREVMGMSLNSLGYSLNETDETKLQEAKANLMDLTPNVKAIVGDEIKLLLANEEA--- 230
Query: 92 KAFGIGDVWVAVGWSSDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRV 151
GIG VW G +++++ ++++ V+PK G+++W D IP ++ V
Sbjct: 231 ---GIGVVW--SGDANEIMSENENLN--YVIPKEGSNVWFDNVVIPKTAK--------NV 275
Query: 152 RGLSPLIHQWIEFCLQTARA 171
+G H++I F L A
Sbjct: 276 KG----AHEFINFMLDPKNA 291
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 53/245 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNSHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
EV +I + + LLA S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDFKKAEAKLLAIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ N+A +PK GA+LW DL A+PA + G
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPADA------------GNPQQA 284
Query: 159 HQWIEFCLQTARALPFKQEV-IPGASPSA---LESTLVKLPGELLKGKPSLDTNLIAGVP 214
H +I + L V +P+A ++ LV P E+ + LD I+ P
Sbjct: 285 HTFINYLLDPQVIAKVSASVGYANPNPAAKQYMDPELVSNP-EVYPSQAVLDKLYISTTP 343
Query: 215 PAEIL 219
P I+
Sbjct: 344 PQSIM 348
>gi|374338055|ref|YP_005094765.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus macedonicus ACA-DC 198]
gi|372284165|emb|CCF02419.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Streptococcus macedonicus ACA-DC 198]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 31/147 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + AP E W DLW E I +V+ REV +G++
Sbjct: 133 YSIPYFWGTLGIVYNDTMVEN---AP-EHWSDLWNSEYTNDIMLVDGAREVMGIGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
LN L+ +A +K + I GD + V +S S++L + +
Sbjct: 189 YSLNTKSLSELNAASQKLDDLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNE 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA ++ D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMVFFDVFAMPADAK 287
>gi|421319887|ref|ZP_15770445.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
gi|395924775|gb|EJH35577.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
Length = 336
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 109 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 162
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 163 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 221
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 222 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 269
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 270 ENQAEIVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKGEFINDV 318
Query: 229 SEATLS 234
TL+
Sbjct: 319 GPETLA 324
>gi|424779942|ref|ZP_18206828.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Catellicoccus marimammalium M35/04/3]
gi|422843481|gb|EKU27918.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Catellicoccus marimammalium M35/04/3]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 53/247 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y +F K L W DLW L I +++ REV+G
Sbjct: 125 FDP-GNRYSIPYFWGTLGIVYN-DRFVKKGLT-FTTWNDLWDKSLKNNIMLIDGAREVMG 181
Query: 73 ------------------SIAVQLNLALLANQS---AHHLKAFGIGD---VWVAV-GWSS 107
A Q L L+ N A +K + I + V V G +
Sbjct: 182 LALNKNGDSLNSKNKTQLQKAYQSLLTLVPNVKAIVADEMKMYMINEESAVGVTFSGEAK 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+++ A +H+ V+PK G++LW D IP ++ K+ + +I F L+
Sbjct: 242 EMMDANEHLH--YVIPKDGSNLWFDNMVIPKTAK--NKKAA----------YAFINFMLE 287
Query: 168 TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
A E I ++P+ + L LP E+ + K PP EI R E +
Sbjct: 288 PENAAQ-NAEYIGYSTPN--KKALPLLPKEIREDK--------TFYPPKEITDRLEVYKD 336
Query: 228 LSEATLS 234
L L+
Sbjct: 337 LGNYWLN 343
>gi|293378130|ref|ZP_06624299.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium PC4.1]
gi|292642994|gb|EFF61135.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium PC4.1]
Length = 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPANQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P ++
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTAK 273
>gi|418029113|ref|ZP_12667661.1| hypothetical protein LDBUL1632_00455 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690831|gb|EHE90773.1| hypothetical protein LDBUL1632_00455 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 360
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G V +
Sbjct: 135 SVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGY 191
Query: 81 ALLANQSAH---------------------HLKAFGI-GDVWVAVGWSSDVLPAVKHMSN 118
++ SAH LK + + + + V +S + + S+
Sbjct: 192 SMNDTNSAHLKAAKVKLDKIGKNVKAIVADELKMYMVQNEARIGVTYSGEAAMMMDQDSH 251
Query: 119 V-AVVPKSGASLWADLWAIP 137
+ VVP G++LW D IP
Sbjct: 252 IHYVVPAQGSNLWFDNIVIP 271
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPENK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P E+ ++ A +L L L N S+ ++ GD+
Sbjct: 179 LDAPAEIFATVLNYLGKDPNSLQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VAVGW+ D++ A K+ NVA +PK GA + D++A+P+ ++
Sbjct: 239 VAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|421514559|ref|ZP_15961247.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|401672347|gb|EJS78817.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|384519446|ref|YP_005706751.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|422693431|ref|ZP_16751445.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|422710807|ref|ZP_16767742.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|422725774|ref|ZP_16782231.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|428767801|ref|YP_007153912.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|427185974|emb|CCO73198.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWSSDVL 110
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+++ ++ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 172 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 230
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 231 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 290
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 291 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|329770316|ref|ZP_08261700.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
gi|328836740|gb|EGF86394.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325]
Length = 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 30/156 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y K+K + E W DLW L I ++ RE++G
Sbjct: 125 FDP-GNEYSIPYFWGTLGILYNKTKVPED--LKFEKWDDLWDSRLQNNILAIDGAREMLG 181
Query: 73 ------------SIAVQLNLALLANQSAH-HLKAFG---------IGDVWVAVGWSSD-- 108
V LNLA + H ++KA + WV+V +S D
Sbjct: 182 LALQSEGRSVNEKNEVNLNLAEKKLELLHPNIKAINSDEKKMLMINNEAWVSVVFSGDAS 241
Query: 109 -VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++ K M V +PK G +LW D IP + E
Sbjct: 242 AIMEENKDM--VYAIPKEGTNLWFDNMVIPNTVKNE 275
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 40/195 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP K Y G IAY K K+ + I+ W DLW PE G++ +++ RE+IG
Sbjct: 123 DPGNKYSIV-YTSGVTGIAYNK----KYVIDEIKSWGDLWNPEYKGKVLLLDDNREMIGM 177
Query: 73 -------SIAVQLNLALLANQSAHHLK-------AFGIGDV---------WVAVGWSSDV 109
S + + ++A ++ LK AF ++ W+A WS D
Sbjct: 178 ALKKQGKSNSSKDEAEIIA--ASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDA 235
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRG--LSPLI----HQWI 162
+VA VVP+ GA++++D +AIP ++ K++ + L P + +++I
Sbjct: 236 AFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK--NKELAEKFINFMLEPEVSAKNYEFI 293
Query: 163 EFCLQTARALPFKQE 177
+ +A+ F E
Sbjct: 294 GYSNPNTKAMEFHSE 308
>gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|424677622|ref|ZP_18114473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|424680384|ref|ZP_18117191.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|424684841|ref|ZP_18121550.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|424687545|ref|ZP_18124181.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|424690852|ref|ZP_18127381.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|424693828|ref|ZP_18130240.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|424698568|ref|ZP_18134851.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|424701209|ref|ZP_18137385.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|424705404|ref|ZP_18141456.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|424706470|ref|ZP_18142473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|424717522|ref|ZP_18146812.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|424719423|ref|ZP_18148570.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|424723843|ref|ZP_18152797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|424728208|ref|ZP_18156820.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|424734849|ref|ZP_18163330.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|424750919|ref|ZP_18178974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|402354118|gb|EJU88933.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|402354612|gb|EJU89418.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|402360329|gb|EJU94932.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|402363223|gb|EJU97715.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|402363828|gb|EJU98285.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|402371717|gb|EJV05864.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|402372422|gb|EJV06543.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|402372588|gb|EJV06701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|402379302|gb|EJV13115.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|402384678|gb|EJV18221.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|402387632|gb|EJV21105.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|402394436|gb|EJV27609.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|402396334|gb|EJV29397.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|402396922|gb|EJV29965.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|402405698|gb|EJV38284.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|402406149|gb|EJV38712.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 38/161 (23%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNS 66
+G + PY WGT + Y + + + AP++ W L+ PE+ ++S M++S
Sbjct: 121 KGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPVDSWALLFDPEITKQLSDAGCGLAMLDS 180
Query: 67 PREVIGSIAVQLNLA--------------LLAN--------QSAHHLKAFGIGDVWVAVG 104
E++ L L+ L+AN S+ ++ GD+ VA G
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAGGELIANIRDNITYFHSSRYVSDLANGDICVAAG 240
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA 138
+S D+ A +PK GA+LW D+ A+PA
Sbjct: 241 YSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAVPA 281
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ ++PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 312
>gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus faecalis V583]
gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|422684915|ref|ZP_16743140.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|422701166|ref|ZP_16759007.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|422712163|ref|ZP_16768939.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
gi|422715506|ref|ZP_16772225.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|422720055|ref|ZP_16776678.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|422731739|ref|ZP_16788090.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|422741529|ref|ZP_16795554.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecalis V583]
gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp.
7L76]
gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|365902359|ref|ZP_09440182.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
malefermentans KCTC 3548]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y + ++ W DLW+P+ +I +++S R+V+G
Sbjct: 126 FDPHNR-YSVPYFWGTLGIIYNDQSIKPEE---VQHWNDLWQPKFKNKIMLIDSTRDVLG 181
Query: 73 SIAVQLNLALLA-------------NQSAHHLKAFGIGDVWV---------AVGWS---S 107
V +N ++ N+ + ++KA ++ + AV WS S
Sbjct: 182 FSLVSMNQSMNTTNPAILKAAQAKLNRLSPNVKAVVADEIKMYMTENEAPLAVDWSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+++ H+ VVP G++LW D IP ++
Sbjct: 242 EMIANNPHLH--YVVPTEGSNLWFDNLVIPKTAK 273
>gi|229526354|ref|ZP_04415758.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|422910303|ref|ZP_16944943.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|424660148|ref|ZP_18097396.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
gi|229336512|gb|EEO01530.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|341633624|gb|EGS58420.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|408051055|gb|EKG86173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
Length = 343
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M+ + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMAELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF +
Sbjct: 277 ENQAEIVQTL---GYASATKGGRAILPAE-LRDNPTI-------FPSDEDMKKGEFTNDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 172 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 230
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 231 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 290
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 291 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|89097426|ref|ZP_01170315.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Bacillus sp. NRRL B-14911]
gi|89087722|gb|EAR66834.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Bacillus sp. NRRL B-14911]
Length = 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 52/246 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV IAY I W DLW +L +I +++ REV+G
Sbjct: 126 FDPKNE-YSIPYFWGTVGIAYNTDLLGDK---EITSWNDLWDEDLRNQILLIDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG-------------IGD----------VWVAVGWSSDV 109
LN + L +Q+ HL+ +GD + V WS
Sbjct: 182 MGLNSLNYS-LNDQNKKHLREAKEKLDTLTPNIKAIVGDEIRMLLENDEAAIGVVWSGTA 240
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ N+ V+P+ G +LW D IP + K + HQ++ F L
Sbjct: 241 SELMWKKDNIEYVLPEEGTNLWFDNMVIPKTA----KNVDAA--------HQFMNFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A E + ++P+ + L LP E++ K P E+ + E E L
Sbjct: 289 EVAAQ-NTEYVGYSTPN--KEALNYLPEEIVSDK--------RFYPDPEMTEKLEVYENL 337
Query: 229 SEATLS 234
+ L+
Sbjct: 338 GKKMLA 343
>gi|77458344|ref|YP_347849.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77382347|gb|ABA73860.1| putative putrescine-binding periplasmic protein precursor
[Pseudomonas fluorescens Pf0-1]
Length = 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGFNPDKVKEVLGKNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGWSSDVLP 111
L + +AH ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVSDKDAAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 ----AVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIE 163
AV+ +NV + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMDFLMRPDIIAEITN 305
Query: 164 ---FCLQTARALPFKQEVI---PGASPSA-LESTLVKLPGE 197
+ A A P E I PG+ PS + +TL +P +
Sbjct: 306 SNGYSNANAAATPLVDEAIRNDPGSYPSQEVMATLYAVPDQ 346
>gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|397700780|ref|YP_006538568.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
gi|422693944|ref|ZP_16751949.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|422703511|ref|ZP_16761331.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|397337419|gb|AFO45091.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|422729370|ref|ZP_16785771.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|424757827|ref|ZP_18185555.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|402406292|gb|EJV38850.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|24372851|ref|NP_716893.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
gi|24346959|gb|AAN54338.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
Length = 367
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 97/247 (39%), Gaps = 63/247 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK---HNLAPIEDWKDLWRPELAGRIS-----MVN 65
DP G A PY WGT I Y +K + + P + ++ P+ A +IS M++
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNINKVKAAVGEDAPPFNSMELIFNPKYAEKISKCGFAMLD 179
Query: 66 SPREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAV 103
S +++ + L L LL S+ ++ GD+ VA
Sbjct: 180 SADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAY 239
Query: 104 GWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLS 155
G+S DV A +PK GA+LW D+ AIPA A+ +E
Sbjct: 240 GFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVENA---------- 289
Query: 156 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPP 215
H+ I + L+ P V A+P+ L LV E ++ P++ PP
Sbjct: 290 ---HKLINYLLRPEVIAPISNYV-AYANPNDLAQPLVD---EAIRNDPAI-------YPP 335
Query: 216 AEILARF 222
E+L +
Sbjct: 336 KEVLDKL 342
>gi|399518688|ref|ZP_10759642.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399113182|emb|CCH36200.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 46/175 (26%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-- 60
L +ND G PY +GTV+I Y K + + AP+ W +++PE +
Sbjct: 115 LEKNDPG------NQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLK 168
Query: 61 ---ISMVNSPREVIGSIAVQLNLALLAN------------------------QSAHHLKA 93
++M++SP E+I IA+ L L N SA ++
Sbjct: 169 SCGVAMLDSPTEII-PIALHY-LGLDPNSANPADYDKVTELLLKVRPYVAYFHSAKYMTD 226
Query: 94 FGIGDVWVAVGWSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
GD+ VA+G+S K N V+ PK GA +W D WAIP +++
Sbjct: 227 IANGDICVAIGYSGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|319652982|ref|ZP_08007087.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
gi|317395331|gb|EFV76064.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 94/257 (36%), Gaps = 74/257 (28%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I W DLW PEL +I +++ REV+G
Sbjct: 126 FDP-GNEYSIPYFWGTVGILYNTDILGD---KKITSWNDLWDPELKNQILLIDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAF--------------GIGDVWVAVG- 104
L+ +L H ++KA GIG VW
Sbjct: 182 MGLNSLHYSLNDKNRDHLVEAKQKLDSLTPNIKAIVGDEIRMLMENDEAGIGVVWSGTAQ 241
Query: 105 ---WSSDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIHQ 160
W D L V+P+ G++LW D IP ++ +P HQ
Sbjct: 242 ELMWEKDNLE--------YVLPEEGSNLWFDNMVIPKTAK-------------NPEAAHQ 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG---VPPAE 217
++ F L A E + ++P+ E LK +D I+ P E
Sbjct: 281 FMNFILDPENAAQ-NTEYVGYSTPNK----------EALK---YMDEETISDERFYPDEE 326
Query: 218 ILARFEFLEPLSEATLS 234
+ AR E E L + L+
Sbjct: 327 MTARLEVYENLGKRMLA 343
>gi|443477176|ref|ZP_21067041.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443017738|gb|ELS32116.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
RG + + P GT IAY + DW LW+ + RI++VN PREVIG
Sbjct: 150 RGAVFSIPVSLGTTGIAYNVEAVKSIVGEEPTDWSYLWQHKNKLRITLVNDPREVIGMAL 209
Query: 76 VQLNLALLANQSAHHLKAF----------------------GIGDVWVAVGWSSDVLPAV 113
L+ + + + + AF GD+ + + +S D +
Sbjct: 210 HTLSYSYNSKEESQIEHAFQKLRELMPAIANFSTDAWRDPLASGDLMMCMAFSGDAISLS 269
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ NV V+P +G S+W D AIP + I G H WI + ++
Sbjct: 270 RQNPNVKYVLPNNGTSIWTDTIAIPRGA----PNIEGA--------HAWINYVMK 312
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 174 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 232
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 233 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 292
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 293 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|339487683|ref|YP_004702211.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338838526|gb|AEJ13331.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 403
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 159 DP-GNQYAVPYLWGTNGIGYNIDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 217
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + A + KA GDV VA G+
Sbjct: 218 DELFPAVLNYLGMNPRSEKPADYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 277
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V + +PK G++LW DL AIP + + + L P +
Sbjct: 278 SGDVFQAANRAVEAKNGVKIAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 337
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P Q + ++++LV P E+ + LD I+ P +I
Sbjct: 338 IAKVSATVGYANANPDAQ--------AYMDASLVNNP-EIYPPQDVLDKLYISSTPSPKI 388
Query: 219 L 219
+
Sbjct: 389 M 389
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 30/153 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G+ Y+WGT + + + PI W DLW+P+LAG+I + PR+ I
Sbjct: 118 FDPGGRHSIV-YQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTIN 172
Query: 73 SIAVQLNLAL-------------LANQSAHHLKAFGIGDV-----------WVAVGWSSD 108
+ L ++ A + AH + GD VA+GW+ D
Sbjct: 173 VLLKSLGYSINTTDPGQLAVARERAAELAHRVTLTQEGDEVVTPYLLSDEHVVALGWTYD 232
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
A N+A ++P G LW D + IP S
Sbjct: 233 AFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 265
>gi|116621488|ref|YP_823644.1| ABC transporter substrate-binding protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116224650|gb|ABJ83359.1| extracellular solute-binding protein, family 1 [Candidatus
Solibacter usitatus Ellin6076]
Length = 340
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 54/243 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPI-EDWKDLWRPELAGRISMVNSPREVIG 72
DP + C PY W + Y KS L P + W DLW P+L GR++M++ P +++G
Sbjct: 114 DPALQWCV-PYMWNGTGVVYNKS------LRPAPQRWADLWSPQLKGRLTMLDDPEDMLG 166
Query: 73 SIAVQLNLALLAN-----QSAHH--------LKAF---------GIGDVWVAVGWSSDVL 110
+ +L+L+ A Q A H L+A+ GDV A WS+
Sbjct: 167 ACLKKLSLSFNATDPAQLQRAEHEAIAQKPLLRAYLNAEVRDQLVAGDVLAAQLWSTTAQ 226
Query: 111 PAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
A+ +A P G + D I SR L H+++ F L+
Sbjct: 227 QAIDAAPQLAFAYPAEGFPFYCDCAVILRESRRPE------------LAHKFLNFLLRP- 273
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
P +++ + + L E + P+L P EI AR E+ P+
Sbjct: 274 ---PVSAQIVQATRTATANGAALSLLPEDTRNNPAL-------YPGPEIYARGEWPHPVP 323
Query: 230 EAT 232
AT
Sbjct: 324 NAT 326
>gi|419828281|ref|ZP_14351772.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|419833202|ref|ZP_14356663.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|422312585|ref|ZP_16396240.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|422917159|ref|ZP_16951486.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|423820186|ref|ZP_17716089.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|423853555|ref|ZP_17719881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|423880885|ref|ZP_17723483.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|423997575|ref|ZP_17740833.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|424016282|ref|ZP_17756122.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|424019223|ref|ZP_17759018.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|424624766|ref|ZP_18063237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|424629267|ref|ZP_18067563.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|424633298|ref|ZP_18071407.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|424636390|ref|ZP_18074404.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|424640327|ref|ZP_18078216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|424648362|ref|ZP_18086031.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|443527187|ref|ZP_21093250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
gi|341638136|gb|EGS62790.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|408013893|gb|EKG51580.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|408019323|gb|EKG56722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|408024628|gb|EKG61723.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|408025295|gb|EKG62357.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|408034500|gb|EKG70995.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|408056925|gb|EKG91795.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|408614575|gb|EKK87845.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|408623354|gb|EKK96308.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|408635445|gb|EKL07637.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|408642066|gb|EKL13823.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|408642945|gb|EKL14687.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|408650526|gb|EKL21801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|408853217|gb|EKL93014.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|408860984|gb|EKM00587.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|408868574|gb|EKM07897.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|443454281|gb|ELT18085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
Length = 343
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG + Y S I W DLW + ++ +++ R+V G
Sbjct: 116 DPQNKF-SLPYIWGITGLYYNSSTLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFG- 169
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+ + + W+ +
Sbjct: 170 MALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHV-PYVSGEATLGMQWNGNA 228
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 229 YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQP 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
Q + SA + LP E L+ P++ P E + + EF+ +
Sbjct: 277 ENQAEVVQSL---GYASATKGGRALLPAE-LRDNPTI-------FPSDEDMKKGEFINDV 325
Query: 229 SEATLS 234
TL+
Sbjct: 326 GPETLA 331
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A +L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|424762359|ref|ZP_18189868.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis TX1337RF]
gi|402424979|gb|EJV57139.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium TX1337RF]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPANQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
+D++ +H+ V+P G++LW D +P + E
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVKNE 275
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|146305165|ref|YP_001185630.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573366|gb|ABP82898.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 46/175 (26%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-- 60
L +ND G PY +GTV+I Y K + + AP+ W +++PE +
Sbjct: 115 LEKNDPG------NQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLK 168
Query: 61 ---ISMVNSPREVIGSIAVQLNLALLAN------------------------QSAHHLKA 93
++M++SP E+I IA+ L L N SA ++
Sbjct: 169 SCGVAMLDSPTEII-PIALHY-LGLDPNSSNPADYDKVTELLLKVRPYVAYFHSAKYMTD 226
Query: 94 FGIGDVWVAVGWSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
GD+ VA+G+S K N V+ PK GA +W D WAIP +++
Sbjct: 227 IANGDICVAIGYSGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A +L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D++ A K+ NVA +PK GA + D++A+PA ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|337751378|ref|YP_004645540.1| ABC transporter substrate-binding protein [Paenibacillus
mucilaginosus KNP414]
gi|336302567|gb|AEI45670.1| extracellular solute-binding protein family 1 [Paenibacillus
mucilaginosus KNP414]
Length = 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 93/246 (37%), Gaps = 51/246 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y + W DLW +L +I +V+ REV+G
Sbjct: 126 FDP-GNKYSVPYFWGTVGIIYNPDLLEEG--KTFTSWNDLWDEKLENQILLVDGAREVMG 182
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD V V WS D
Sbjct: 183 MGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVKAI-VGDEIKMLLANEEAAVGVVWSGDA 241
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP + + G H +I F L
Sbjct: 242 SEIMDENDKLDYVVPEEGSNLWFDNMVIPKTAH--------NIEG----AHAFINFMLDP 289
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A E + ++P+ ES L LP E+ K P E+ + E E L
Sbjct: 290 EVAAQ-NAEYVGYSTPN--ESALEFLPEEISGDK--------RFYPDPELTEKLEVYENL 338
Query: 229 SEATLS 234
+ LS
Sbjct: 339 GKRMLS 344
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 174 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 232
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 233 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 292
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 293 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|421502860|ref|ZP_15949812.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400346317|gb|EJO94675.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 46/175 (26%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-- 60
L +ND G PY +GTV+I Y K + + AP+ W +++PE +
Sbjct: 115 LEKNDPGNQ------YGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLK 168
Query: 61 ---ISMVNSPREVIGSIAVQLNLALLAN------------------------QSAHHLKA 93
++M++SP E+I IA+ L L N SA ++
Sbjct: 169 SCGVAMLDSPTEII-PIALHY-LGLDPNSSNPADYDKVTELLLKVRPYVAYFHSAKYMTD 226
Query: 94 FGIGDVWVAVGWSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
GD+ VA+G+S K N V+ PK GA +W D WAIP +++
Sbjct: 227 IANGDICVAIGYSGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|417003430|ref|ZP_11942493.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325478622|gb|EGC81734.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 359
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV--I 71
DP G + PY WGT I Y K+++ + + WK+LW + G I + RE I
Sbjct: 127 DP-GNEYSIPYLWGTFGIVYNTKKYQESDFSS---WKNLWDKKFEGEILSFDGARETLGI 182
Query: 72 GSIAVQLNL-----------------------ALLANQSAHHLKAFGIGDVWVAVGWSSD 108
G +A L+L A+LA++ ++ + + V + +S D
Sbjct: 183 GLLANNLSLNTTDPKKLVEVRNELIGFMGNVKAILADEIRMYM---ALEEANVGITFSGD 239
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
A++ N++ +PK G+++W D IP S+
Sbjct: 240 ASSAIESNENLSYTIPKEGSNIWFDTMVIPKTSK 273
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 28/143 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WG+V I Y + P + W LW GRISM+N REV G
Sbjct: 122 FDPERRY-SIPYLWGSVGIGYDAAVIP----TPPDSWAILWDERYKGRISMLNDQREVFG 176
Query: 73 SIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVAVGWSSDVL 110
++ + ++ + S H+ + G+V +A W V
Sbjct: 177 AVLRSMGQSMNSTDPQVIEAAKERLLRQKPLVKTYTSDHYDQLLASGEVVLAHAWGGPVA 236
Query: 111 PA-VKHMSNVAVVPKSGASLWAD 132
A V+ S VVPK GA+LWAD
Sbjct: 237 RAMVERPSIRYVVPKEGATLWAD 259
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|116872186|ref|YP_848967.1| ABC transporter spermidine/putrescine binding protein [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116741064|emb|CAK20184.1| ABC transporter spermidine/putrescine binding protein [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 59/222 (26%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
+DPR + PY WGT+ I Y K F + W L+ PEL +I ++
Sbjct: 117 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKKMFPDKKF---DTWNALFDPELKNQILLI 173
Query: 65 NSPREVIG----SIAVQLNLALLANQSAHHLKAFG-------------IGD--------- 98
+ REV+G S+ LN + + +HLKA +GD
Sbjct: 174 DGAREVMGLGLNSLGYSLN-----DTNKNHLKAARDKLETMTPNVKAIVGDEIKLLMADN 228
Query: 99 -VWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
VAV +S + + ++ V+P G++LW D IP + K + G
Sbjct: 229 EAGVAVTFSGEAAEMLSENEDLEYVIPTDGSNLWFDNMVIPKTA----KNVDGA------ 278
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGEL 198
H++I F L+ A E + A+P+ E + LP E+
Sbjct: 279 --HKFINFMLKPENA-AINAEYVGYATPN--EKAVKLLPKEI 315
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 79 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 95/249 (38%), Gaps = 64/249 (25%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E + G + A PY WGT I Y K ++ + I+ W L+ PE +S ++
Sbjct: 118 ETNDPGNMYAVPYLWGTNGIGYNVEKVKEVLGVDHIDSWAVLFEPENMKNLTTCGVSFLD 177
Query: 66 SPREVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAV 103
S E+I ++ + L LLA S+ + G++ VA
Sbjct: 178 SADEMIPAVLNYMGLDPNSKNPDDYKKAEEKLLAVRPYVTYFHSSKFISDLANGNICVAA 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DVL A K + +PK G +LW D+ AIPA S+ KQ
Sbjct: 238 GFSGDVLQAADRAEEAGKGIDIAYAIPKEGGNLWFDMMAIPADSK-NVKQ---------- 286
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG---V 213
H +I + LQ EVI G S V LK +D +
Sbjct: 287 -AHAFINYLLQP--------EVIAGV------SDYVGYANPNLKSAKFMDQEVSTNPSVY 331
Query: 214 PPAEILARF 222
PP E+L R
Sbjct: 332 PPQEVLDRL 340
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|386316892|ref|YP_006013056.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|323127179|gb|ADX24476.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPQND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 SIAVQLNLALLANQSAH---------------------HLKAFGI-GDVWVAVGWS---S 107
++ + H +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEHLEAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 79 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|433447823|ref|ZP_20411199.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus TNO-09.006]
gi|431999664|gb|ELK20580.1| Spermidine/putrescine transport system substrate-binding protein
[Anoxybacillus flavithermus TNO-09.006]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 44/212 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT I Y ++ I W DLW P ++ +++ RE++G
Sbjct: 126 FDP-GNEHSIPYFWGTFGIVYNRALLGG---KEITSWNDLWDPSFKNQVLLIDGAREIMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L+ +L AH ++KA +GD + + WS D
Sbjct: 182 MALNSLHYSLNDTNRAHLQQAKQKLDKLTPNVKAI-VGDEIKMLLANEEAAIGIVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + V+PK G +LW D IP + K I G HQ+I F L
Sbjct: 241 AEIMWENERLDYVIPKEGTNLWFDNMVIPKTA----KNIEGA--------HQFINFMLDP 288
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLK 200
A E + ++P+ + L LP E+++
Sbjct: 289 KNAAQ-NAEYVGYSTPN--KKALEYLPKEIVE 317
>gi|146320655|ref|YP_001200366.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 98HAH33]
gi|145691461|gb|ABP91966.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 98HAH33]
Length = 284
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 47/191 (24%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y ++ P ++W+DLW E I ++
Sbjct: 45 IDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLI 100
Query: 65 NSPREVIGSIAVQLNLALLAN------QSAHHL---------------KAFGIGD-VWVA 102
+ REV+G L +L +N ++A HL K + I D +A
Sbjct: 101 DGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAIA 160
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
V +S + + N+ VVP G++LW D IP + K I G + +
Sbjct: 161 VSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTA----KNIDGA--------YAF 208
Query: 162 IEFCLQTARAL 172
+ F L+ AL
Sbjct: 209 MSFMLRPENAL 219
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|69245027|ref|ZP_00603185.1| extracellular solute-binding protein, family 1 [Enterococcus
faecium DO]
gi|257879275|ref|ZP_05658928.1| extracellular solute-binding protein [Enterococcus faecium
1,230,933]
gi|257881907|ref|ZP_05661560.1| extracellular solute-binding protein [Enterococcus faecium
1,231,502]
gi|257890103|ref|ZP_05669756.1| extracellular solute-binding protein [Enterococcus faecium
1,231,410]
gi|260558721|ref|ZP_05830910.1| extracellular solute-binding protein family 1 [Enterococcus faecium
C68]
gi|293563219|ref|ZP_06677672.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1162]
gi|294617946|ref|ZP_06697551.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1679]
gi|294622376|ref|ZP_06701405.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium U0317]
gi|314937331|ref|ZP_07844671.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a04]
gi|314940973|ref|ZP_07847876.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133C]
gi|314949062|ref|ZP_07852424.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0082]
gi|314953466|ref|ZP_07856382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133A]
gi|314994155|ref|ZP_07859462.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133B]
gi|314995965|ref|ZP_07861045.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a01]
gi|383327994|ref|YP_005353878.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium Aus0004]
gi|389867883|ref|YP_006375306.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium DO]
gi|415891827|ref|ZP_11549822.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4453]
gi|424790006|ref|ZP_18216608.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium V689]
gi|424794876|ref|ZP_18220797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium S447]
gi|424819315|ref|ZP_18244434.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R501]
gi|424852782|ref|ZP_18277170.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R499]
gi|424950672|ref|ZP_18365826.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R496]
gi|424953166|ref|ZP_18368147.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R494]
gi|424955741|ref|ZP_18370558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R446]
gi|424960198|ref|ZP_18374737.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1986]
gi|424963993|ref|ZP_18378137.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1190]
gi|424966295|ref|ZP_18380103.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1140]
gi|424972193|ref|ZP_18385566.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1139]
gi|424974753|ref|ZP_18387969.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1137]
gi|424976470|ref|ZP_18389558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1123]
gi|424981237|ref|ZP_18393977.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV99]
gi|424983462|ref|ZP_18396046.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV69]
gi|424986373|ref|ZP_18398798.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV38]
gi|424990200|ref|ZP_18402423.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV26]
gi|424994071|ref|ZP_18406030.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV168]
gi|424996558|ref|ZP_18408358.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV165]
gi|425003745|ref|ZP_18415088.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV102]
gi|425006943|ref|ZP_18418097.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV1]
gi|425010230|ref|ZP_18421196.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E422]
gi|425013643|ref|ZP_18424364.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E417]
gi|425018135|ref|ZP_18428608.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C621]
gi|425021006|ref|ZP_18431290.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C497]
gi|425022734|ref|ZP_18432894.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C1904]
gi|425030913|ref|ZP_18436069.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 515]
gi|425034529|ref|ZP_18439414.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 514]
gi|425037299|ref|ZP_18441975.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 513]
gi|425042206|ref|ZP_18446559.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 511]
gi|425045556|ref|ZP_18449652.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 510]
gi|425047648|ref|ZP_18451593.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 509]
gi|425051075|ref|ZP_18454759.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 506]
gi|425060081|ref|ZP_18463390.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 503]
gi|430831441|ref|ZP_19449492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0333]
gi|430846791|ref|ZP_19464645.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1133]
gi|430856058|ref|ZP_19473762.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1392]
gi|431535463|ref|ZP_19517309.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1731]
gi|431747972|ref|ZP_19536736.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2297]
gi|431754001|ref|ZP_19542666.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2883]
gi|431769978|ref|ZP_19558382.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1644]
gi|431774113|ref|ZP_19562426.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2369]
gi|431776951|ref|ZP_19565208.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2560]
gi|431779215|ref|ZP_19567411.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4389]
gi|431781259|ref|ZP_19569407.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6012]
gi|431784887|ref|ZP_19572923.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6045]
gi|68196028|gb|EAN10460.1| extracellular solute-binding protein, family 1 [Enterococcus
faecium DO]
gi|257813503|gb|EEV42261.1| extracellular solute-binding protein [Enterococcus faecium
1,230,933]
gi|257817565|gb|EEV44893.1| extracellular solute-binding protein [Enterococcus faecium
1,231,502]
gi|257826463|gb|EEV53089.1| extracellular solute-binding protein [Enterococcus faecium
1,231,410]
gi|260075180|gb|EEW63493.1| extracellular solute-binding protein family 1 [Enterococcus faecium
C68]
gi|291595755|gb|EFF27043.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1679]
gi|291598136|gb|EFF29239.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium U0317]
gi|291604814|gb|EFF34295.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1162]
gi|313589841|gb|EFR68686.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a01]
gi|313591422|gb|EFR70267.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133B]
gi|313594499|gb|EFR73344.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133A]
gi|313600205|gb|EFR79048.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133C]
gi|313643282|gb|EFS07862.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0133a04]
gi|313644539|gb|EFS09119.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium TX0082]
gi|364093688|gb|EHM35935.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4453]
gi|378937688|gb|AFC62760.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecium Aus0004]
gi|388533132|gb|AFK58324.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecium DO]
gi|402921345|gb|EJX41797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium V689]
gi|402925446|gb|EJX45586.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium S447]
gi|402926293|gb|EJX46340.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R501]
gi|402932738|gb|EJX52223.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R496]
gi|402933100|gb|EJX52558.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R499]
gi|402939747|gb|EJX58635.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R494]
gi|402947645|gb|EJX65843.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1190]
gi|402947884|gb|EJX66066.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R446]
gi|402948622|gb|EJX66743.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1986]
gi|402955622|gb|EJX73141.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1137]
gi|402955778|gb|EJX73282.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1139]
gi|402956808|gb|EJX74237.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1140]
gi|402964145|gb|EJX80959.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV99]
gi|402969404|gb|EJX85818.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium P1123]
gi|402971403|gb|EJX87674.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV69]
gi|402976676|gb|EJX92549.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV38]
gi|402980078|gb|EJX95708.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV26]
gi|402980937|gb|EJX96500.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV168]
gi|402988406|gb|EJY03416.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV165]
gi|402991177|gb|EJY05990.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV102]
gi|402996081|gb|EJY10487.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV1]
gi|403000561|gb|EJY14671.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E417]
gi|403000733|gb|EJY14833.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium E422]
gi|403002903|gb|EJY16836.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C621]
gi|403007945|gb|EJY21483.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C497]
gi|403012173|gb|EJY25432.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium C1904]
gi|403016731|gb|EJY29529.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 515]
gi|403020255|gb|EJY32806.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 514]
gi|403022265|gb|EJY34651.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 513]
gi|403024073|gb|EJY36263.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 511]
gi|403026757|gb|EJY38701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 510]
gi|403033190|gb|EJY44708.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 509]
gi|403038676|gb|EJY49878.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 506]
gi|403042983|gb|EJY53913.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 503]
gi|430481324|gb|ELA58480.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0333]
gi|430538345|gb|ELA78637.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1133]
gi|430545347|gb|ELA85321.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1392]
gi|430595034|gb|ELB32982.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1731]
gi|430614848|gb|ELB51819.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2297]
gi|430619924|gb|ELB56727.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2883]
gi|430634664|gb|ELB70779.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2369]
gi|430636047|gb|ELB72122.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1644]
gi|430639892|gb|ELB75746.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2560]
gi|430642480|gb|ELB78257.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4389]
gi|430648725|gb|ELB84125.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6045]
gi|430649620|gb|ELB84988.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E6012]
Length = 357
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFFDANQ---IKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 100/254 (39%), Gaps = 66/254 (25%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + + I+ W ++ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDEIDSWSVIFEPENAAKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
I+ ++S E+I ++ L L + +A + KA
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLETKQIG 148
G++ VA G+S DV A K + +P GA+LW D+ AIPA AS +E
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVEEA--- 283
Query: 149 GRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTN 208
H +I + L + EVI S + GEL+ + D +
Sbjct: 284 ----------HAFINYLL--------RPEVIAAVSDYVGYANPNLKAGELMDQEVREDAS 325
Query: 209 LIAGVPPAEILARF 222
+ PP E+L R
Sbjct: 326 V---YPPQEVLDRL 336
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ ++PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|424884182|ref|ZP_18307802.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R497]
gi|425000801|ref|ZP_18412348.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV161]
gi|431638725|ref|ZP_19523352.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1904]
gi|402933671|gb|EJX53087.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium R497]
gi|402988483|gb|EJY03489.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium ERV161]
gi|430602204|gb|ELB39783.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1904]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFFDANQ---IKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 169 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 227
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 228 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 287
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 288 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 332
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ ++PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|427396635|ref|ZP_18889394.1| hypothetical protein HMPREF9307_01570 [Enterococcus durans
FB129-CNAB-4]
gi|425723305|gb|EKU86196.1| hypothetical protein HMPREF9307_01570 [Enterococcus durans
FB129-CNAB-4]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFFDANQ---IKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|422724570|ref|ZP_16781046.1| putative spermidine/putrescine-binding periplasmic protein PotD,
partial [Enterococcus faecalis TX2137]
gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2137]
Length = 367
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNKF-SVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 79 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 267
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 268 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|422687689|ref|ZP_16745860.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|424672163|ref|ZP_18109144.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|402357208|gb|EJU91922.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|304405421|ref|ZP_07387080.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
gi|304345460|gb|EFM11295.1| extracellular solute-binding protein family 1 [Paenibacillus
curdlanolyticus YK9]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 62/153 (40%), Gaps = 29/153 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y I W DLW P L +I +V+ REV+G
Sbjct: 126 FDP-GNAYSIPYFWGTVGIIYNPDLLDGWQ---ITSWNDLWDPRLRNQILLVDGAREVMG 181
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L+ +L H ++KA +GD V V WS D
Sbjct: 182 FGLNSLHFSLNDTNEDHLQEAKRKLQTLTPNVKAI-VGDEIKMLIANEEAAVGVVWSGDA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ + VVP+ G++LW D IP +R
Sbjct: 241 SEIMDENDKLDYVVPEEGSNLWFDNMVIPKTAR 273
>gi|320546885|ref|ZP_08041188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus equinus ATCC
9812]
gi|320448480|gb|EFW89220.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus equinus ATCC
9812]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 31/147 (21%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + AP E W DLW+ E A I +V+ RE +G++
Sbjct: 133 YSVPYFWGTLGIVYNDTMVAN---AP-EHWSDLWKSEYANNIMLVDGAREAMGIGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
LN L A +K + I GD + V +S S++L + +
Sbjct: 189 YSLNTKSLTELDAASKKLDSLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEASEMLDSNE 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|422697722|ref|ZP_16755654.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFI--DGRQIKHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|376262419|ref|YP_005149139.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
gi|373946413|gb|AEY67334.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
Length = 349
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y K+ ++ P+E W LW + +I M++S R+ IG
Sbjct: 122 FDPDNE-YSVPYMWGTVGIIYNKTMVKE----PVESWNILWDKKYDKQIFMLDSQRDSIG 176
Query: 73 SIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDVL 110
+L +L KA +G+ +AV WS D +
Sbjct: 177 VTLKKLGYSLNTKNKEELEKAKNELIKQKDIVQAYVGDEVKDKMIMGEGALAVVWSGDAV 236
Query: 111 PAVKHMSNVAV-VPKSGASLWADLWAIPAASR 141
++ +PK G++LW D IP+ ++
Sbjct: 237 YMKSQNKDLEYAIPKEGSNLWFDSMVIPSTAK 268
>gi|312900019|ref|ZP_07759336.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
gi|311292776|gb|EFQ71332.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|398963475|ref|ZP_10679632.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398149693|gb|EJM38332.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 365
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I Y K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGYNPDKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAHHLKAFGI----------------------GDVWVAVGWSSDVLP 111
L + AH L+A + G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDKDKAHILEAEALFMKIRPYVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 ----AVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIE 163
AV+ + V + +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAVEAGNKVQIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEITN 305
Query: 164 ---FCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
+ A A P E I PG+ PS A+ +TL +P +
Sbjct: 306 SNGYSNANAAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 107 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|399925056|ref|ZP_10782414.1| extracellular solute-binding protein [Peptoniphilus rhinitidis
1-13]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGTV I Y K++ + ++ W LW + +I M NS R+ IG
Sbjct: 117 FDPENK-YSVPYFWGTVGIVYNKAEVKDK----VDSWDILWDKKYKDQIIMYNSQRDTIG 171
Query: 73 SIAVQLNLALLANQSAH-----------------HLKAFG-----IGDVWVAVGWSSDVL 110
+L +L + +L G GD ++V +S D L
Sbjct: 172 VALKRLGYSLNSTNEKELEEAKKSLIEQKPLVYAYLDDDGRDVIVQGDANLSVMYSGDAL 231
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWI-----EF 164
+ ++ V+PK G+++W D IP + K + G + + ++ + E+
Sbjct: 232 LMMDQNEDLDYVIPKEGSNIWYDSMVIPKNA----KNVSGAEKFIDYMLRPEVQAKNAEY 287
Query: 165 CLQTARALPFKQEVIP 180
C+ + +E++P
Sbjct: 288 CVGYTSPVKGVKELLP 303
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 107 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 24 YRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLALL 83
Y WG IAY K KH W DLW+ E G++ +++ RE+IG + +
Sbjct: 126 YMWGVTGIAYNK----KHIAEAPTSWADLWKDEYKGKVLLLDDNREIIGMALKKAGKSNS 181
Query: 84 ANQSAH-------------HLKAFGIGDV---------WVAVGWSSDVLPAVKHMSNVA- 120
A+ A ++ AF ++ W+ WS D + +VA
Sbjct: 182 ADNEADINAAADDLRKLVPNVVAFDTDNIKQKMIQEEGWIGTVWSGDAAFIAEENPDVAY 241
Query: 121 VVPKSGASLWADLWAIPAASR 141
VVP+ G++++AD +AIP ++
Sbjct: 242 VVPQEGSTIFADTYAIPKGAK 262
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 107 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|387606407|ref|YP_006095263.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|421452923|ref|ZP_15902279.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
gi|400181232|gb|EJO15499.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
Length = 355
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 41/196 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I +V+ REV+G
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVLG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + + GD + V +S +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMVQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 287
Query: 170 RALPFKQEVIPGASPS 185
A E I A+P+
Sbjct: 288 NAAQ-NAEYIGYATPN 302
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNKF-AIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A +L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D++ A K+ NVA +PK GA + D++A+P+ ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|392331550|ref|ZP_10276165.1| spermidine/putrescine extracellular binding protein [Streptococcus
canis FSL Z3-227]
gi|391419229|gb|EIQ82041.1| spermidine/putrescine extracellular binding protein [Streptococcus
canis FSL Z3-227]
Length = 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APLH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLGQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 36/165 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVN 65
+ DP G A Y WGT I Y K + I+ W L++PE A + I++V+
Sbjct: 119 KYDP-GNEYAVNYMWGTTGIGYNVDKVKAALGDVQIDSWDVLFKPENAAKLKDCGINIVD 177
Query: 66 SPREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAV 103
+P E + G I ++ + S+ ++ GD +++
Sbjct: 178 APEETVAVAMNYLGKDGDSKKKEDLEAGGDIYTKIRSYVRTFNSSSYINDLANGDKCISI 237
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GWS DVL A K+ NV ++P+ G +W D AIPA ++
Sbjct: 238 GWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNLAIPADAK 282
>gi|416288836|ref|ZP_11649363.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
Length = 358
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|409993243|ref|ZP_11276392.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding
protein [Arthrospira platensis NIES-39]
gi|409935915|gb|EKN77430.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 363
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 69
+ DP + P WGT + Y R + +P EDW+DLW + +L R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLSSSP-EDWEDLWTYQDQLNRRLTLLNDVRE 186
Query: 70 VIGSIAVQLNLALLA------NQSAHHL-KAFG---------------IGDVWVAVGWSS 107
V+G+ +L + + NQ+ L K G +GD+ +A+ +SS
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSS 246
Query: 108 D---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEF 164
D V+P + + + P SG+SLW D IP ++ G +QWI F
Sbjct: 247 DAAEVMPENEDLE--YITPVSGSSLWIDTLVIPKSA---PNPEGA---------YQWINF 292
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEF 224
L+ A E + A+PS + +LP E L+ P+L PP ++A E
Sbjct: 293 MLRPDIATQIV-ERLSFATPSLV--AYRQLPQE-LREDPAL-------FPPESVIANSET 341
Query: 225 LEPL 228
+ PL
Sbjct: 342 VSPL 345
>gi|415771503|ref|ZP_11485362.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
gi|315619861|gb|EFV00380.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNCAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|289551086|ref|YP_003471990.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus lugdunensis HKU09-01]
gi|385784705|ref|YP_005760878.1| ABC transporter extracellular binding protein [Staphylococcus
lugdunensis N920143]
gi|418414380|ref|ZP_12987595.1| hypothetical protein HMPREF9308_00760 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418637440|ref|ZP_13199762.1| ABC transporter, solute-binding protein [Staphylococcus lugdunensis
VCU139]
gi|289180618|gb|ADC87863.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus lugdunensis HKU09-01]
gi|339894961|emb|CCB54266.1| ABC transporter extracellular binding protein [Staphylococcus
lugdunensis N920143]
gi|374839067|gb|EHS02593.1| ABC transporter, solute-binding protein [Staphylococcus lugdunensis
VCU139]
gi|410876987|gb|EKS24884.1| hypothetical protein HMPREF9308_00760 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 94/245 (38%), Gaps = 49/245 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K + A W DL++ + +V+ RE+IG
Sbjct: 128 KGNQYSIPYFFGTVGILYNKQAYPD---ASFNHWSDLYQERYRNDVLLVDGAREIIGLSL 184
Query: 76 VQLNLALLANQSAH------HLKAFG------IGDVW----------VAVGWSSDVLPAV 113
+L +L S H LK G +GD +AV WS P V
Sbjct: 185 NKLGYSLNDTNSQHLRQAEQDLKKLGPQVRGVVGDEVTMMLQQNEGNIAVVWSGVAAPLV 244
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
+ VVPK G++LW D IP R + G +Q+I F L +
Sbjct: 245 QGSDKYNYVVPKEGSNLWFDNMVIP---RTAQNKEGA---------YQFINFLLDAENSK 292
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEAT 232
E + A+P+ L LP E+ N P + AR E + L + T
Sbjct: 293 K-NTEWVGYATPNKAARQL--LPNEI--------RNDHRFYPTQQEQARLEVYKDLGQRT 341
Query: 233 LSDMS 237
L + +
Sbjct: 342 LGNYN 346
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|223933871|ref|ZP_03625836.1| extracellular solute-binding protein family 1 [Streptococcus suis
89/1591]
gi|302023707|ref|ZP_07248918.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Streptococcus suis 05HAS68]
gi|330832742|ref|YP_004401567.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis ST3]
gi|386584009|ref|YP_006080412.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis D9]
gi|223897460|gb|EEF63856.1| extracellular solute-binding protein family 1 [Streptococcus suis
89/1591]
gi|329306965|gb|AEB81381.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis ST3]
gi|353736155|gb|AER17164.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis D9]
Length = 356
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y ++ P ++W+DLW E I ++
Sbjct: 117 IDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLI 172
Query: 65 NSPREVIGSIAVQLNLALLAN------QSAHHL---------------KAFGIGD-VWVA 102
+ REV+G L +L +N ++A HL K + I D +A
Sbjct: 173 DGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAIA 232
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
V +S + + N+ VVP G++LW D IP ++
Sbjct: 233 VSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAK 272
>gi|386056365|ref|YP_005972887.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|392981709|ref|YP_006480296.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|419756621|ref|ZP_14282967.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421151364|ref|ZP_15610979.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|347302671|gb|AEO72785.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|384396994|gb|EIE43411.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317214|gb|AFM62594.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404527401|gb|EKA37562.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|453045675|gb|EME93393.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRP 297
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 298 EVISKVSDYVGYANA-------IPGARP--LMDKSVSDSEEVYPPQAVLDKLYVSAVLPA 348
Query: 217 EIL 219
++L
Sbjct: 349 KVL 351
>gi|386613073|ref|YP_006132739.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|254237466|ref|ZP_04930789.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126169397|gb|EAZ54908.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
Length = 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKASDNAYAFIDYLLRP 297
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 298 EVIAKVSDYVGYANA-------IPGARP--LMDKSVSDSEEVYPPQAVLDKLYVSAVLPA 348
Query: 217 EIL 219
++L
Sbjct: 349 KVL 351
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 2457T]
gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 301]
gi|415854716|ref|ZP_11530302.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|417700887|ref|ZP_12350020.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|417706478|ref|ZP_12355534.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|417716351|ref|ZP_12365280.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|417721888|ref|ZP_12370729.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|417727257|ref|ZP_12375998.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|417732382|ref|ZP_12381051.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|420319367|ref|ZP_14821220.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|420340477|ref|ZP_14842001.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 2457T]
gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 301]
gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|391253555|gb|EIQ12728.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|391273034|gb|EIQ31863.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 42/172 (24%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----I 61
N + DP G A + WGT + Y + K ++ AP+ +++PE+A + I
Sbjct: 122 NRIAQYDP-GNEYAVNWMWGTTGVGYNEGKIKERMADAPVNSLDMIFKPEIAAKFKDCGI 180
Query: 62 SMVNSPREVIGSIAVQLN-LALLAN------------------------QSAHHLKAFGI 96
M++SP ++I V LN L L N S+ ++ A
Sbjct: 181 YMLDSPEDII---PVALNYLGLDPNTKNPEDFQKVEDMLLKIRPYIKKFHSSEYINALAN 237
Query: 97 GDVWVAVGWSSDVLPA---VKHMSNVAV----VPKSGASLWADLWAIPAASR 141
GD +A+GWS D+L A + N V +PK G +W D+ AIPA ++
Sbjct: 238 GDACMALGWSGDILQAASRAEEAKNGQVIKYNIPKEGTQMWFDMMAIPADAK 289
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 182 PAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV+ A K+ NVA +PK GA + D++AIPA ++
Sbjct: 242 GWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|312902419|ref|ZP_07761625.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
gi|310634089|gb|EFQ17372.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
Length = 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNKF-SVPYFWGTLGIIYN-DKFI--DGRQIQHWHDLWRPELKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|146318462|ref|YP_001198174.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 05ZYH33]
gi|253751596|ref|YP_003024737.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis SC84]
gi|253753497|ref|YP_003026638.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis P1/7]
gi|253755677|ref|YP_003028817.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis BM407]
gi|386577784|ref|YP_006074190.1| family 1 extracellular solute-binding protein [Streptococcus suis
GZ1]
gi|386579839|ref|YP_006076244.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis JS14]
gi|386581783|ref|YP_006078187.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis SS12]
gi|386586134|ref|YP_006082536.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis D12]
gi|386588019|ref|YP_006084420.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis A7]
gi|403061422|ref|YP_006649638.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis S735]
gi|145689268|gb|ABP89774.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
suis 05ZYH33]
gi|251815885|emb|CAZ51496.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis SC84]
gi|251818141|emb|CAZ55938.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis BM407]
gi|251819743|emb|CAR45608.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis P1/7]
gi|292558247|gb|ADE31248.1| extracellular solute-binding protein, family 1 [Streptococcus suis
GZ1]
gi|319758031|gb|ADV69973.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis JS14]
gi|353733929|gb|AER14939.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis SS12]
gi|353738280|gb|AER19288.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis D12]
gi|354985180|gb|AER44078.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis A7]
gi|402808748|gb|AFR00240.1| spermidine/putrescine extracellular binding protein [Streptococcus
suis S735]
Length = 356
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y ++ P ++W+DLW E I ++
Sbjct: 117 IDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLI 172
Query: 65 NSPREVIGSIAVQLNLALLAN------QSAHHL---------------KAFGIGD-VWVA 102
+ REV+G L +L +N ++A HL K + I D +A
Sbjct: 173 DGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAIA 232
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
V +S + + N+ VVP G++LW D IP ++
Sbjct: 233 VSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAK 272
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 107 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei Ss046]
gi|383177490|ref|YP_005455495.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei 53G]
gi|414575112|ref|ZP_11432318.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|415850294|ref|ZP_11527214.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|418263261|ref|ZP_12884326.1| potF [Shigella sonnei str. Moseley]
gi|420357600|ref|ZP_14858606.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|420362455|ref|ZP_14863371.1| potF [Shigella sonnei 4822-66]
gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046]
gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|391287188|gb|EIQ45719.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|391288061|gb|EIQ46570.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|391296028|gb|EIQ54144.1| potF [Shigella sonnei 4822-66]
gi|397902732|gb|EJL19044.1| potF [Shigella sonnei str. Moseley]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 107 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 182 PAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV+ A K+ NVA +PK GA + D++AIPA ++
Sbjct: 242 GWAGDVMQAANRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|366052509|ref|ZP_09450231.1| spermidine/putrescine ABC transporter binding protein
[Lactobacillus suebicus KCTC 3549]
Length = 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGT+ I Y KF K + +E WK LW P+ I + +S R+++
Sbjct: 126 FDPHND-YSVPYFWGTLGIVYN-DKFVKR--SQVEHWKQLWNPQFKNDIMLTDSARDMMA 181
Query: 73 SIAVQLNLALLANQSAHHL--------------KAFGIGDVW---------VAVGWSSDV 109
+ L ++ + + HHL KA ++ +AV +S +
Sbjct: 182 VALITLGYSV-NSTNYHHLQQASQKLDQLAPNTKAVVADEIKMYMEQNEAPIAVTYSGEA 240
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ S++ VVP G+++W D W IP ++
Sbjct: 241 AEMMSQNSHLHYVVPSEGSNMWFDNWVIPKTAK 273
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432977512|ref|ZP_20166335.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|433086463|ref|ZP_20272858.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
gi|431481023|gb|ELH60737.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|431609120|gb|ELI78453.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418323574|ref|ZP_12934841.1| ABC transporter, solute-binding protein [Staphylococcus
pettenkoferi VCU012]
gi|365229419|gb|EHM70570.1| ABC transporter, solute-binding protein [Staphylococcus
pettenkoferi VCU012]
Length = 252
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 42/210 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY +GTV I Y K ++ + WKDL R EL + +V+ REVI
Sbjct: 20 DFDPHNR-YSIPYFFGTVGILYNKDRYPN---IKFDSWKDLTRSELKNDVLLVDGAREVI 75
Query: 72 GSIAVQLNLALLANQSAHHLKAFG------------IGD----------VWVAVGWSSDV 109
G + +L H +A +GD AV WS
Sbjct: 76 GLSLNRYGYSLNDTSETHLHRAQTFLNELKPQVKGVVGDEVTMMMTQHEANAAVVWSGVA 135
Query: 110 LPAVK-HMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
P V+ H V+PK G+++W D IP + + K+ R +I+F L+
Sbjct: 136 TPIVQEHPEFEYVIPKEGSNVWIDNMVIPKTA--QNKEAAYR----------FIDFLLE- 182
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGEL 198
AR E + A+P+ ++ +LP E+
Sbjct: 183 ARNSKQNTEWVGYATPN--KAARAQLPAEI 210
>gi|315658585|ref|ZP_07911456.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus lugdunensis
M23590]
gi|315496374|gb|EFU84698.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus lugdunensis
M23590]
Length = 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 94/245 (38%), Gaps = 49/245 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + PY +GTV I Y K + A W DL++ + +V+ RE+IG
Sbjct: 128 KGNQYSIPYFFGTVGILYNKQAYPD---ASFNHWSDLYQERYRNDVLLVDGAREIIGLSL 184
Query: 76 VQLNLALLANQSAH------HLKAFG------IGDVW----------VAVGWSSDVLPAV 113
+L +L S H LK G +GD +AV WS P V
Sbjct: 185 NKLGYSLNDTNSQHIRQAEQDLKKLGPQVRGVVGDEVTMMLQQNEGNIAVVWSGVAAPLV 244
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
+ VVPK G++LW D IP R + G +Q+I F L +
Sbjct: 245 QGSDKYNYVVPKEGSNLWFDNMVIP---RTAQNKEGA---------YQFINFLLDAENSK 292
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEAT 232
E + A+P+ L LP E+ N P + AR E + L + T
Sbjct: 293 K-NTEWVGYATPNKAARQL--LPNEI--------RNDHRFYPTQQEQARLEVYKDLGQRT 341
Query: 233 LSDMS 237
L + +
Sbjct: 342 LGNYN 346
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
fergusonii ATCC 35469]
gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ATCC 35469]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|389856673|ref|YP_006358916.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis ST1]
gi|353740391|gb|AER21398.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis ST1]
Length = 356
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y ++ P ++W+DLW E I ++
Sbjct: 117 IDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVEN----PPQEWEDLWSEEYRDNIMLI 172
Query: 65 NSPREVIGSIAVQLNLALLAN------QSAHHL---------------KAFGIGD-VWVA 102
+ REV+G L +L +N ++A HL K + I D +A
Sbjct: 173 DGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAIA 232
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
V +S + + N+ VVP G++LW D IP ++
Sbjct: 233 VSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAK 272
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP+ + A PY W T I Y K + API W + +PE + +S +++
Sbjct: 123 DPQNQ-YAIPYLWATTGIGYNVEKVKAALGTDAPINSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A +L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYQGKDPNSSNAGDYTGSATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV+ A K+ NVA +PK GA + D++A+P ++
Sbjct: 242 GWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UMN026]
gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302]
gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|416896433|ref|ZP_11926280.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|417118740|ref|ZP_11969258.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|417137151|ref|ZP_11980941.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|417307307|ref|ZP_12094179.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|417585791|ref|ZP_12236564.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|419936211|ref|ZP_14453231.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|422332326|ref|ZP_16413340.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|422970756|ref|ZP_16974268.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|424815776|ref|ZP_18240927.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|432352815|ref|ZP_19596099.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|432401049|ref|ZP_19643803.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|432425105|ref|ZP_19667620.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|432459876|ref|ZP_19702033.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|432474965|ref|ZP_19716973.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|432488498|ref|ZP_19730383.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|432521547|ref|ZP_19758703.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|432536914|ref|ZP_19773831.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|432601390|ref|ZP_19837639.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|432630475|ref|ZP_19866419.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|432640073|ref|ZP_19875913.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|432665142|ref|ZP_19900728.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|432679277|ref|ZP_19914676.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|432717897|ref|ZP_19952892.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|432769704|ref|ZP_20004057.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|432774047|ref|ZP_20008333.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|432838517|ref|ZP_20072006.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|432849312|ref|ZP_20080534.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|432860597|ref|ZP_20085736.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|432873898|ref|ZP_20093166.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|432885269|ref|ZP_20099864.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|432911212|ref|ZP_20117693.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|432960421|ref|ZP_20150552.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|433017829|ref|ZP_20206090.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|433052230|ref|ZP_20239456.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|433062100|ref|ZP_20249057.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|433067109|ref|ZP_20253934.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|433157839|ref|ZP_20342704.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|433177391|ref|ZP_20361841.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|433202398|ref|ZP_20386195.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UMN026]
gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302]
gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|338771178|gb|EGP25926.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|345338947|gb|EGW71373.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|371599786|gb|EHN88566.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|373246637|gb|EHP66089.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|386138274|gb|EIG79434.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|386158715|gb|EIH15048.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|388401680|gb|EIL62308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|430877743|gb|ELC01177.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|430927647|gb|ELC48210.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|430958339|gb|ELC76933.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|430991159|gb|ELD07575.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|431008473|gb|ELD23274.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|431023066|gb|ELD36323.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|431044611|gb|ELD54883.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|431072491|gb|ELD80242.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|431143223|gb|ELE44961.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|431173510|gb|ELE73586.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|431184589|gb|ELE84346.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|431203547|gb|ELF02204.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|431224337|gb|ELF21564.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|431265576|gb|ELF57140.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|431317786|gb|ELG05562.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|431320045|gb|ELG07697.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|431390983|gb|ELG74631.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|431401312|gb|ELG84656.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|431404493|gb|ELG87744.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|431407581|gb|ELG90792.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|431419252|gb|ELH01610.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|431443928|gb|ELH24953.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|431478108|gb|ELH57867.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|431536201|gb|ELI12532.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|431575006|gb|ELI47763.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|431587016|gb|ELI58398.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|431589815|gb|ELI61021.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|431681215|gb|ELJ47021.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|431709300|gb|ELJ73770.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|431725038|gb|ELJ88949.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
Length = 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 98 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 156
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 157 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 216
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 217 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 261
>gi|418254221|ref|ZP_12879118.1| potF [Shigella flexneri 6603-63]
gi|397900578|gb|EJL16937.1| potF [Shigella flexneri 6603-63]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|336392100|ref|ZP_08573499.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAV---- 76
+ PY WGT+ I Y N + I+ W DLW P+L I +V+S R+++G +
Sbjct: 133 SVPYFWGTLGIIYNDQMI---NGSQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQGH 189
Query: 77 QLNLALLANQSAHHLKAFGI------------------GDVWVAVGWSSDVLPAVKHMSN 118
+N +A LK G+ + VAV WS + + + S+
Sbjct: 190 SVNTTNIAELEQAKLKLEGLMPNVKAVVADEIKMYMAQNEAAVAVTWSGEAAEMMANNSH 249
Query: 119 V-AVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LHYVVPTEGSNLWFDNLVIPKTAK 273
>gi|376006159|ref|ZP_09783485.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375325462|emb|CCE19238.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 363
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 69
+ DP + P WGT + Y R + +P EDW+DLW + +L R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLSNSP-EDWEDLWTYQDQLNRRLTLLNDVRE 186
Query: 70 VIGSIAVQLNLALLA------NQSAHHL-KAFG---------------IGDVWVAVGWSS 107
V+G+ +L + + NQ+ L K G +GD+ +A+ +SS
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSS 246
Query: 108 D---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEF 164
D V+P + + + P SG+SLW D IP ++ G +QWI F
Sbjct: 247 DAAEVMPENEDLE--YITPVSGSSLWIDTLVIPKSA---PNPEGA---------YQWINF 292
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEF 224
L+ A E + A+PS + +LP E L+ P+L PP ++A E
Sbjct: 293 MLRPDIATQIV-ERLSFATPSLV--AYRQLPQE-LREDPAL-------FPPESVIANSET 341
Query: 225 LEPL 228
+ PL
Sbjct: 342 VSPL 345
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SMS-3-5]
gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI39]
gi|222155578|ref|YP_002555717.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|386623257|ref|YP_006142985.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O7:K1 str. CE10]
gi|387616110|ref|YP_006119132.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli SMS-3-5]
gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI39]
gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O83:H1 str. NRG 857C]
gi|349736995|gb|AEQ11701.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O7:K1 str. CE10]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|257883907|ref|ZP_05663560.1| extracellular solute-binding protein [Enterococcus faecium
1,231,501]
gi|257819745|gb|EEV46893.1| extracellular solute-binding protein [Enterococcus faecium
1,231,501]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 39/171 (22%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS--- 62
+D ++DP G + PY WGT Y + + + + AP + W ++ PE+ G++S
Sbjct: 115 DDLEKVDP-GSQFSLPYLWGTNGYGYNEGRIQDILGDSAPTDSWALVFDPEVTGKLSAGG 173
Query: 63 ----MVNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGI 96
M++S E++ + + L +N S+ ++
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLNPNSNNAEDIKKGGEVIKATRPNITYFHSSRYIADLAN 233
Query: 97 GDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAAS 140
GD+ VA G+S D+L A +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAGNGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|431514111|ref|ZP_19516159.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1634]
gi|430586367|gb|ELB24628.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1634]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|431586472|ref|ZP_19520987.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1861]
gi|430593650|gb|ELB31636.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1861]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPANQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|432390887|ref|ZP_19633745.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|432615685|ref|ZP_19851812.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|450186707|ref|ZP_21889625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|430921505|gb|ELC42329.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|431156860|gb|ELE57526.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|449324226|gb|EMD14163.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|257892893|ref|ZP_05672546.1| extracellular solute-binding protein [Enterococcus faecium
1,231,408]
gi|257829272|gb|EEV55879.1| extracellular solute-binding protein [Enterococcus faecium
1,231,408]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPANQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|425304379|ref|ZP_18694159.1| putrescine-binding periplasmic protein [Escherichia coli N1]
gi|408231148|gb|EKI54444.1| putrescine-binding periplasmic protein [Escherichia coli N1]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRG-LSPL 157
S DV A K+ N+A +PK G++LW DL AIPA + TK+ + L P
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPADAS-NTKEAHAFINYLLDPQ 295
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ + + A P A+ ++ LV P E+ + LD I+ PP
Sbjct: 296 VIAKVSASVGYANPNP--------AAKQFMDPELVNNP-EVYPPQEVLDKLYISTTPPQA 346
Query: 218 IL 219
I+
Sbjct: 347 IM 348
>gi|110641056|ref|YP_668786.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 536]
gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215485985|ref|YP_002328416.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557758|ref|YP_002390671.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli S88]
gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ED1a]
gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|386598572|ref|YP_006100078.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|386605253|ref|YP_006111553.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UM146]
gi|387828832|ref|YP_003348769.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|416335114|ref|ZP_11671825.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|417083350|ref|ZP_11951445.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|417288918|ref|ZP_12076203.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|417661418|ref|ZP_12310999.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|417754753|ref|ZP_12402844.1| potF [Escherichia coli DEC2B]
gi|418996071|ref|ZP_13543678.1| potF [Escherichia coli DEC1A]
gi|419001120|ref|ZP_13548671.1| potF [Escherichia coli DEC1B]
gi|419006610|ref|ZP_13554063.1| potF [Escherichia coli DEC1C]
gi|419012454|ref|ZP_13559818.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|419017452|ref|ZP_13564771.1| potF [Escherichia coli DEC1E]
gi|419023044|ref|ZP_13570285.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|419027912|ref|ZP_13575104.1| potF [Escherichia coli DEC2C]
gi|419033667|ref|ZP_13580763.1| potF [Escherichia coli DEC2D]
gi|419038720|ref|ZP_13585773.1| potF [Escherichia coli DEC2E]
gi|419699706|ref|ZP_14227318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|419911703|ref|ZP_14430172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|422748099|ref|ZP_16802012.1| extracellular solute-binding protein [Escherichia coli H252]
gi|422753460|ref|ZP_16807287.1| extracellular solute-binding protein [Escherichia coli H263]
gi|422839317|ref|ZP_16887289.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|425299119|ref|ZP_18689161.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|432357183|ref|ZP_19600427.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|432361610|ref|ZP_19604794.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|432380477|ref|ZP_19623432.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|432386304|ref|ZP_19629200.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|432396738|ref|ZP_19639523.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|432405670|ref|ZP_19648390.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|432440215|ref|ZP_19682567.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|432445345|ref|ZP_19687651.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|432470222|ref|ZP_19712274.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|432499066|ref|ZP_19740842.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|432513092|ref|ZP_19750327.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|432572832|ref|ZP_19809322.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|432587092|ref|ZP_19823462.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|432596733|ref|ZP_19833014.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|432610523|ref|ZP_19846694.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|432645281|ref|ZP_19881080.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|432655119|ref|ZP_19890831.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|432693606|ref|ZP_19928817.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|432698204|ref|ZP_19933370.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|432712512|ref|ZP_19947561.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|432722365|ref|ZP_19957288.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|432726953|ref|ZP_19961834.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|432731563|ref|ZP_19966399.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|432740639|ref|ZP_19975360.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|432744824|ref|ZP_19979523.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|432753591|ref|ZP_19988157.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|432758641|ref|ZP_19993141.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|432777731|ref|ZP_20011981.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|432786519|ref|ZP_20020684.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|432820111|ref|ZP_20053824.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|432826327|ref|ZP_20059982.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|432893590|ref|ZP_20105602.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|432897785|ref|ZP_20108616.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|432903437|ref|ZP_20112903.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|432918076|ref|ZP_20122481.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|432925366|ref|ZP_20127395.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|432942903|ref|ZP_20140057.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|432971009|ref|ZP_20159887.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|432980327|ref|ZP_20169105.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|432984481|ref|ZP_20173218.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|432989952|ref|ZP_20178618.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|433004319|ref|ZP_20192757.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|433011574|ref|ZP_20199978.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|433013071|ref|ZP_20201446.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|433022713|ref|ZP_20210725.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|433027879|ref|ZP_20215751.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|433037892|ref|ZP_20225504.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|433077013|ref|ZP_20263575.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|433081779|ref|ZP_20268253.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|433095749|ref|ZP_20281960.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|433100363|ref|ZP_20286470.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|433104959|ref|ZP_20290977.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|433110174|ref|ZP_20296048.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|433143474|ref|ZP_20328640.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|433152944|ref|ZP_20337910.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|433162689|ref|ZP_20347448.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|433167698|ref|ZP_20352364.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|433187638|ref|ZP_20371755.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|433197462|ref|ZP_20381383.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|433322318|ref|ZP_20399788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli
536]
gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component
of ABC superfamily [Escherichia coli O127:H6 str.
E2348/69]
gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S88]
gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli ED1a]
gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UM146]
gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252]
gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263]
gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|355352766|gb|EHG01940.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|371609849|gb|EHN98382.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|377848061|gb|EHU13058.1| potF [Escherichia coli DEC1A]
gi|377849686|gb|EHU14655.1| potF [Escherichia coli DEC1C]
gi|377852468|gb|EHU17387.1| potF [Escherichia coli DEC1B]
gi|377862077|gb|EHU26891.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|377865908|gb|EHU30698.1| potF [Escherichia coli DEC1E]
gi|377868054|gb|EHU32803.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|377878196|gb|EHU42784.1| potF [Escherichia coli DEC2B]
gi|377882844|gb|EHU47375.1| potF [Escherichia coli DEC2D]
gi|377884039|gb|EHU48556.1| potF [Escherichia coli DEC2C]
gi|377897181|gb|EHU61564.1| potF [Escherichia coli DEC2E]
gi|380348812|gb|EIA37088.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|386247710|gb|EII93883.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|388393013|gb|EIL54407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|408221062|gb|EKI45045.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|430879049|gb|ELC02406.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|430889500|gb|ELC12161.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|430909225|gb|ELC30610.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|430910792|gb|ELC32092.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|430917058|gb|ELC38106.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|430931824|gb|ELC52258.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|430968941|gb|ELC86109.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|430975187|gb|ELC92089.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|430999400|gb|ELD15482.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|431031737|gb|ELD44475.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|431044131|gb|ELD54411.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|431110040|gb|ELE13967.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|431123259|gb|ELE26001.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|431132518|gb|ELE34517.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|431150864|gb|ELE51906.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|431182512|gb|ELE82329.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|431194029|gb|ELE93299.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|431236272|gb|ELF31485.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|431246344|gb|ELF40610.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|431258645|gb|ELF51408.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|431267442|gb|ELF58959.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|431274741|gb|ELF65786.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|431277818|gb|ELF68822.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|431285230|gb|ELF76066.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|431294300|gb|ELF84480.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|431304827|gb|ELF93351.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|431310580|gb|ELF98761.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|431329920|gb|ELG17205.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|431341155|gb|ELG28169.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|431370367|gb|ELG56168.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|431374111|gb|ELG59706.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|431424570|gb|ELH06666.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|431428512|gb|ELH10453.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|431435881|gb|ELH17489.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|431446257|gb|ELH27006.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|431448087|gb|ELH28805.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|431452790|gb|ELH33201.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|431486146|gb|ELH65803.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|431493222|gb|ELH72816.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|431496827|gb|ELH76405.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|431505060|gb|ELH83683.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|431517640|gb|ELH95162.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|431518189|gb|ELH95709.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|431534519|gb|ELI11001.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|431539450|gb|ELI15201.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|431545260|gb|ELI19920.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|431554062|gb|ELI27944.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|431600291|gb|ELI69963.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|431605614|gb|ELI75003.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|431619007|gb|ELI87935.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|431621820|gb|ELI90610.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|431630810|gb|ELI99138.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|431633715|gb|ELJ01978.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|431665576|gb|ELJ32294.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|431678037|gb|ELJ44049.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|431691359|gb|ELJ56819.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|431692960|gb|ELJ58381.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|431708638|gb|ELJ73146.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|431724536|gb|ELJ88453.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|432349036|gb|ELL43477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli HS]
gi|170020743|ref|YP_001725697.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ATCC 8739]
gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|251784398|ref|YP_002998702.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC
superfamily [Escherichia coli B str. REL606]
gi|254287777|ref|YP_003053525.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BL21(DE3)]
gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|417120464|ref|ZP_11970022.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|417627783|ref|ZP_12278030.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|417690217|ref|ZP_12339441.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|421776936|ref|ZP_16213537.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|422835645|ref|ZP_16883698.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|425287734|ref|ZP_18678640.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|432453610|ref|ZP_19695847.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|432530189|ref|ZP_19767229.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|432542240|ref|ZP_19779096.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|432547710|ref|ZP_19784497.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|432620994|ref|ZP_19857035.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|432673850|ref|ZP_19909339.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|432814491|ref|ZP_20048281.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|433032350|ref|ZP_20220124.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|442599401|ref|ZP_21017119.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli HS]
gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli
ATCC 8739]
gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli B str. REL606]
gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BL21(DE3)]
gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|345378087|gb|EGX10018.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|371611824|gb|EHO00343.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|386149119|gb|EIG95551.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|408216953|gb|EKI41240.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|408458050|gb|EKJ81840.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|430973749|gb|ELC90694.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|431056563|gb|ELD66064.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|431076494|gb|ELD83989.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|431083646|gb|ELD89818.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|431161460|gb|ELE61931.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|431217224|gb|ELF14804.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|431366714|gb|ELG53211.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|431558736|gb|ELI32345.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|441651671|emb|CCQ02616.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|257886683|ref|ZP_05666336.1| extracellular solute-binding protein [Enterococcus faecium
1,141,733]
gi|431757287|ref|ZP_19545918.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3083]
gi|431762558|ref|ZP_19551118.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3548]
gi|257822737|gb|EEV49669.1| extracellular solute-binding protein [Enterococcus faecium
1,141,733]
gi|430619576|gb|ELB56403.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3083]
gi|430623607|gb|ELB60286.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3548]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPANQ-YSIPYFWGTLGIVYNDKFF---DADQIQHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|283779715|ref|YP_003370470.1| family 1 extracellular solute-binding protein [Pirellula staleyi
DSM 6068]
gi|283438168|gb|ADB16610.1| extracellular solute-binding protein family 1 [Pirellula staleyi
DSM 6068]
Length = 367
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 60/255 (23%)
Query: 4 YLRRNDAGEIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP 55
Y R +A +DPR + PY WGTV +A + + + D+ L+ P
Sbjct: 123 YARLTNASHLDPRFLGHEFDLQNEFSLPYFWGTVAVAIRDDFVSEK----VVDFAPLFDP 178
Query: 56 ELAGRISMVNSPREVIGSIAVQLNLALLANQSAHHLKAFG-------------------- 95
+ RI ++ ++ + L L + + HL+ G
Sbjct: 179 KYRSRIVALDDAENMVAVALLHLGLPM-NSTDPEHLRLAGKLLKSQVPLVQAYTSDAYKE 237
Query: 96 ---IGDVWVAVGWSSDVLPAVKHMSNVAVVPKS-GASLWADLWAIPAASRLETKQIGGRV 151
GD WVAVGW+ D+ A ++ V+ ++ G +W D IP+ +
Sbjct: 238 KLIAGDAWVAVGWNGDLRQAADEEPHIQVINRAQGTMVWLDSMVIPSGA----------- 286
Query: 152 RGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIA 211
+ L H+ I F L A A E + SP+ L LP EL N A
Sbjct: 287 -PHAELAHELINFLLDPAIAAR-NAEFVHFGSPNTAARAL--LPDEL--------KNDTA 334
Query: 212 GVPPAEILARFEFLE 226
PP +++A+ +L+
Sbjct: 335 IYPPDDVIAKSVYLK 349
>gi|152989077|ref|YP_001345787.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452878415|ref|ZP_21955626.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|150964235|gb|ABR86260.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452184919|gb|EME11937.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 365
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKEYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRP 297
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A +PGA P L V E+ + LD ++ V PA
Sbjct: 298 EVIAKVSDYVGYANA-------VPGARP--LMDKSVSDSEEVYPPQAVLDKAYVSAVLPA 348
Query: 217 EIL 219
++L
Sbjct: 349 KVL 351
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386638205|ref|YP_006105003.1| putrescine-binding periplasmic protein [Escherichia coli ABU 83972]
gi|432410855|ref|ZP_19653536.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|432430903|ref|ZP_19673346.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|432435431|ref|ZP_19677830.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|432455718|ref|ZP_19697917.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|432494656|ref|ZP_19736472.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|432503495|ref|ZP_19745230.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|432522940|ref|ZP_19760077.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|432567686|ref|ZP_19804211.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|432591906|ref|ZP_19828233.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|432606673|ref|ZP_19842866.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|432650315|ref|ZP_19886075.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|432782739|ref|ZP_20016923.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|432843158|ref|ZP_20076493.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|432994584|ref|ZP_20183198.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|432999002|ref|ZP_20187540.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|433057146|ref|ZP_20244229.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|433114738|ref|ZP_20300552.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|433124397|ref|ZP_20309984.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|433138457|ref|ZP_20323741.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|433148244|ref|ZP_20333308.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|433206972|ref|ZP_20390667.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|433211720|ref|ZP_20395333.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|442606405|ref|ZP_21021205.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli
ABU 83972]
gi|430937353|gb|ELC57608.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|430955343|gb|ELC74126.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|430965759|gb|ELC83168.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|430984445|gb|ELD01068.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|431027261|gb|ELD40324.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|431041541|gb|ELD52041.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|431054250|gb|ELD63831.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|431102634|gb|ELE07448.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|431131822|gb|ELE33838.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|431140125|gb|ELE41902.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|431192871|gb|ELE92215.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|431331138|gb|ELG18401.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|431396929|gb|ELG80391.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|431508797|gb|ELH87068.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|431513342|gb|ELH91425.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|431573714|gb|ELI46511.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|431636448|gb|ELJ04579.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|431649204|gb|ELJ16563.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|431664635|gb|ELJ31369.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|431676357|gb|ELJ42477.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|431732188|gb|ELJ95644.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|431735918|gb|ELJ99262.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|441712481|emb|CCQ07182.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|336435037|ref|ZP_08614755.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001930|gb|EGN32057.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 609
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K PY WGT+ I Y +K ++ P++ W L+ E AG I M NS R+
Sbjct: 381 FDPENKY-TVPYFWGTLGILYDTTKVKE----PVDSWDVLFNGEYAGEIIMQNSMRDTYM 435
Query: 73 SIAVQLNLALLANQ-----SAHHL--------KAFGI---------GDVWVAVGWSSDVL 110
L +L +N +AH L +A+ + G+ +AV +S +
Sbjct: 436 VAMKALGYSLNSNNEDEVNAAHDLLVKQKPDVQAYLVDEARDEVVAGNATMAVVYSGEAY 495
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAI 136
++ ++A V+PK G+++W D W +
Sbjct: 496 LGNQYNEDLAYVIPKEGSNVWLDSWCV 522
>gi|262274396|ref|ZP_06052207.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262220959|gb|EEY72273.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 347
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 55/235 (23%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG----SIAVQL 78
PY WG I+Y + + + W DLW+PE AG I +++ R+V G + +
Sbjct: 129 PYVWGVTAISYNGNIVDG---SKVTKWADLWKPEFAGHIILLDDVRDVFGMALKAKGYSI 185
Query: 79 NLA-------------------LLANQSAHHLKAFGIGDVWVAVGWSSDVLPAVKHMSNV 119
N ++ N A H+ F G+V + W+ + A M N+
Sbjct: 186 NTTNEAEIKEAYEMLKTLRPNVVVYNSDAPHV-PFVTGEVGIGQQWNGNAYLAQAEMDNI 244
Query: 120 AVV-PKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQE 177
V P+ G+ LW D + IP A +++ L H++I+F + +E
Sbjct: 245 QFVYPEEGSILWMDNFIIPKGAEKVD-------------LAHKFIDFMYRPENQAAMVEE 291
Query: 178 V-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
+ P S A E KL E + N+I P E + + EF + +A
Sbjct: 292 LGYPAPSKRAKE----KLSAEY------TENNVI--FPSDEDVEKGEFTNDVGDA 334
>gi|257897880|ref|ZP_05677533.1| extracellular solute-binding protein [Enterococcus faecium Com15]
gi|293553974|ref|ZP_06674577.1| spermidine/putrescine-binding periplasmic protein [Enterococcus
faecium E1039]
gi|293573072|ref|ZP_06684012.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E980]
gi|406583222|ref|ZP_11058310.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD3E]
gi|406585559|ref|ZP_11060545.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD2E]
gi|406591205|ref|ZP_11065501.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD1E]
gi|416132683|ref|ZP_11597935.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4452]
gi|425059470|ref|ZP_18462808.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 504]
gi|430819456|ref|ZP_19438110.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0045]
gi|430822968|ref|ZP_19441543.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0120]
gi|430825940|ref|ZP_19444138.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0164]
gi|430828036|ref|ZP_19446166.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0269]
gi|430834355|ref|ZP_19452362.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0679]
gi|430835379|ref|ZP_19453369.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0680]
gi|430838550|ref|ZP_19456496.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0688]
gi|430841896|ref|ZP_19459813.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1007]
gi|430843596|ref|ZP_19461495.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1050]
gi|430852131|ref|ZP_19469866.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1258]
gi|430857695|ref|ZP_19475328.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1552]
gi|430860654|ref|ZP_19478253.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1573]
gi|430865707|ref|ZP_19481282.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1574]
gi|430882950|ref|ZP_19484155.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1575]
gi|430946155|ref|ZP_19485631.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1576]
gi|431002082|ref|ZP_19488673.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1578]
gi|431033456|ref|ZP_19491302.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1590]
gi|431077757|ref|ZP_19495222.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1604]
gi|431112324|ref|ZP_19497700.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1613]
gi|431149596|ref|ZP_19499454.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1620]
gi|431230271|ref|ZP_19502474.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1622]
gi|431251011|ref|ZP_19503945.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1623]
gi|431301493|ref|ZP_19507812.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1626]
gi|431374642|ref|ZP_19510330.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1627]
gi|431415576|ref|ZP_19512379.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1630]
gi|431736969|ref|ZP_19525926.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1972]
gi|431741194|ref|ZP_19530100.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2039]
gi|431742675|ref|ZP_19531560.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2071]
gi|431746668|ref|ZP_19535493.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2134]
gi|431752439|ref|ZP_19541122.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2620]
gi|431759775|ref|ZP_19548385.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3346]
gi|431764610|ref|ZP_19553147.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4215]
gi|431767669|ref|ZP_19556116.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1321]
gi|447912149|ref|YP_007393561.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecium NRRL B-2354]
gi|257835792|gb|EEV60866.1| extracellular solute-binding protein [Enterococcus faecium Com15]
gi|291601857|gb|EFF32106.1| spermidine/putrescine-binding periplasmic protein [Enterococcus
faecium E1039]
gi|291606865|gb|EFF36247.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E980]
gi|364093225|gb|EHM35516.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E4452]
gi|403034876|gb|EJY46296.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecium 504]
gi|404457015|gb|EKA03601.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD3E]
gi|404462514|gb|EKA08247.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD2E]
gi|404468086|gb|EKA13115.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus sp. GMD1E]
gi|430440605|gb|ELA50847.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0045]
gi|430442897|gb|ELA52918.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0120]
gi|430445648|gb|ELA55378.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0164]
gi|430484117|gb|ELA61152.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0269]
gi|430485586|gb|ELA62492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0679]
gi|430489370|gb|ELA65984.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0680]
gi|430491792|gb|ELA68244.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E0688]
gi|430493714|gb|ELA70005.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1007]
gi|430497455|gb|ELA73492.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1050]
gi|430542713|gb|ELA82821.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1258]
gi|430546905|gb|ELA86847.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1552]
gi|430552052|gb|ELA91802.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1573]
gi|430552772|gb|ELA92498.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1574]
gi|430556507|gb|ELA96005.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1575]
gi|430558627|gb|ELA98039.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1576]
gi|430562202|gb|ELB01453.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1578]
gi|430564557|gb|ELB03741.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1590]
gi|430566172|gb|ELB05293.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1604]
gi|430569278|gb|ELB08295.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1613]
gi|430574257|gb|ELB13035.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1622]
gi|430575485|gb|ELB14201.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1620]
gi|430578918|gb|ELB17465.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1623]
gi|430580683|gb|ELB19150.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1626]
gi|430583266|gb|ELB21655.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1627]
gi|430589020|gb|ELB27177.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1630]
gi|430599624|gb|ELB37322.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1972]
gi|430601851|gb|ELB39433.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2039]
gi|430607909|gb|ELB45205.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2071]
gi|430608570|gb|ELB45816.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2134]
gi|430613930|gb|ELB50929.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E2620]
gi|430625677|gb|ELB62292.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E3346]
gi|430630622|gb|ELB66977.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1321]
gi|430630750|gb|ELB67099.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E4215]
gi|445187858|gb|AGE29500.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecium NRRL B-2354]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVLFEPENIKKLSQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRG-LSPL 157
S DV A K+ N+A +PK G++LW DL AIPA + TK+ + L P
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPADAS-NTKEAHAFINYLLDPQ 295
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
+ + + A P A+ ++ LV P E+ + LD I+ PP
Sbjct: 296 VIAKVSASVGYANPNP--------AAKQFMDPELVNNP-EVYPPQEVLDKLYISTTPPQA 346
Query: 218 IL 219
I+
Sbjct: 347 IM 348
>gi|422830736|ref|ZP_16878890.1| putrescine-binding periplasmic protein [Escherichia coli B093]
gi|371603842|gb|EHN92477.1| putrescine-binding periplasmic protein [Escherichia coli B093]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|209559391|ref|YP_002285863.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus pyogenes NZ131]
gi|209540592|gb|ACI61168.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Streptococcus pyogenes NZ131]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPQND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|381352986|pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
gi|381352987|pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 96 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 155
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 156 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 215
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 216 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRP 275
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 276 EVIAKVSDYVGYANA-------IPGARP--LMDKSVSDSEEVYPPQAVLDKLYVSAVLPA 326
Query: 217 EIL 219
++L
Sbjct: 327 KVL 329
>gi|383479980|ref|YP_005388874.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS15252]
gi|383493896|ref|YP_005411572.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS1882]
gi|378927970|gb|AFC66176.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS15252]
gi|378929624|gb|AFC68041.1| spermidine putrescine ABC transport system substrate-binding
protein PotD [Streptococcus pyogenes MGAS1882]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPQND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|15800606|ref|NP_286620.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EDL933]
gi|15830188|ref|NP_308961.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. Sakai]
gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. EC4024]
gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209397481|ref|YP_002269524.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EC4115]
gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. TW14359]
gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387505963|ref|YP_006158219.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O55:H7 str. RM12579]
gi|387881465|ref|YP_006311767.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli Xuzhou21]
gi|416309490|ref|ZP_11655862.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|416317369|ref|ZP_11660410.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|416332128|ref|ZP_11670207.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|416781959|ref|ZP_11877428.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|416793190|ref|ZP_11882351.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|416804456|ref|ZP_11887211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|416815481|ref|ZP_11891917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97]
gi|416825314|ref|ZP_11896502.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|416836159|ref|ZP_11901774.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|419043994|ref|ZP_13590965.1| potF [Escherichia coli DEC3A]
gi|419049501|ref|ZP_13596417.1| potF [Escherichia coli DEC3B]
gi|419055582|ref|ZP_13602435.1| potF [Escherichia coli DEC3C]
gi|419061154|ref|ZP_13607933.1| potF [Escherichia coli DEC3D]
gi|419067252|ref|ZP_13613727.1| potF [Escherichia coli DEC3E]
gi|419074036|ref|ZP_13619604.1| potF [Escherichia coli DEC3F]
gi|419079265|ref|ZP_13624747.1| potF [Escherichia coli DEC4A]
gi|419084900|ref|ZP_13630309.1| potF [Escherichia coli DEC4B]
gi|419090906|ref|ZP_13636223.1| potF [Escherichia coli DEC4C]
gi|419096798|ref|ZP_13642040.1| potF [Escherichia coli DEC4D]
gi|419102640|ref|ZP_13647805.1| potF [Escherichia coli DEC4E]
gi|419108002|ref|ZP_13653111.1| potF [Escherichia coli DEC4F]
gi|419113771|ref|ZP_13658801.1| potF [Escherichia coli DEC5A]
gi|419119409|ref|ZP_13664387.1| potF [Escherichia coli DEC5B]
gi|419125105|ref|ZP_13670002.1| potF [Escherichia coli DEC5C]
gi|419130657|ref|ZP_13675504.1| potF [Escherichia coli DEC5D]
gi|419135384|ref|ZP_13680190.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|420268190|ref|ZP_14770594.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|420273938|ref|ZP_14776270.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|420279166|ref|ZP_14781431.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|420285277|ref|ZP_14787492.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|420291047|ref|ZP_14793210.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|420296647|ref|ZP_14798740.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|420302899|ref|ZP_14804925.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|420308123|ref|ZP_14810095.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|420313944|ref|ZP_14815849.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|421811129|ref|ZP_16246928.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|421817210|ref|ZP_16252765.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|421822614|ref|ZP_16258051.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|421829352|ref|ZP_16264679.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|423664786|ref|ZP_17639948.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|424075800|ref|ZP_17813140.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|424082129|ref|ZP_17818980.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|424088762|ref|ZP_17825008.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|424094974|ref|ZP_17830719.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|424101395|ref|ZP_17836540.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|424108193|ref|ZP_17842759.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|424114185|ref|ZP_17848321.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|424120244|ref|ZP_17853937.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|424126484|ref|ZP_17859679.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|424132590|ref|ZP_17865381.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|424139133|ref|ZP_17871418.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|424145574|ref|ZP_17877334.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|424151707|ref|ZP_17882953.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|424190199|ref|ZP_17888392.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|424271769|ref|ZP_17894300.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|424425517|ref|ZP_17900023.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|424454119|ref|ZP_17905645.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|424460434|ref|ZP_17911345.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|424466903|ref|ZP_17917082.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|424473467|ref|ZP_17923127.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|424479398|ref|ZP_17928637.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|424485468|ref|ZP_17934323.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|424491650|ref|ZP_17939985.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|424498687|ref|ZP_17945949.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|424504922|ref|ZP_17951683.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|424511172|ref|ZP_17957385.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|424518707|ref|ZP_17963131.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|424524565|ref|ZP_17968579.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|424530770|ref|ZP_17974385.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|424536747|ref|ZP_17979997.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|424542666|ref|ZP_17985464.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|424548983|ref|ZP_17991173.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|424555230|ref|ZP_17996943.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|424561586|ref|ZP_18002866.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|424567616|ref|ZP_18008520.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|424573808|ref|ZP_18014218.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|424579757|ref|ZP_18019678.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|425096428|ref|ZP_18499441.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|425102572|ref|ZP_18505212.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|425108377|ref|ZP_18510615.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|425124212|ref|ZP_18525770.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|425130241|ref|ZP_18531330.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|425136608|ref|ZP_18537322.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|425142447|ref|ZP_18542734.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|425148796|ref|ZP_18548673.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|425154400|ref|ZP_18553942.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|425160846|ref|ZP_18560017.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|425166374|ref|ZP_18565175.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|425172659|ref|ZP_18571048.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|425178551|ref|ZP_18576593.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|425184697|ref|ZP_18582311.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|425191456|ref|ZP_18588572.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|425197765|ref|ZP_18594407.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|425204431|ref|ZP_18600551.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|425210183|ref|ZP_18605909.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|425216236|ref|ZP_18611541.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|425222818|ref|ZP_18617660.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|425229043|ref|ZP_18623426.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|425235348|ref|ZP_18629302.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|425241345|ref|ZP_18634973.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|425247471|ref|ZP_18640666.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|425253208|ref|ZP_18646067.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|425259483|ref|ZP_18651842.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|425265629|ref|ZP_18657530.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|425293065|ref|ZP_18683633.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|425309798|ref|ZP_18699252.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|425315720|ref|ZP_18704783.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|425321786|ref|ZP_18710444.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|425327978|ref|ZP_18716184.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|425334164|ref|ZP_18721866.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|425340576|ref|ZP_18727801.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|425346443|ref|ZP_18733234.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|425352679|ref|ZP_18739043.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|425358668|ref|ZP_18744625.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|425364782|ref|ZP_18750308.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|425371229|ref|ZP_18756175.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|425384022|ref|ZP_18767885.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|425390712|ref|ZP_18774152.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|425396831|ref|ZP_18779860.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|425402818|ref|ZP_18785409.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|425409356|ref|ZP_18791494.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|425415637|ref|ZP_18797257.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|425426770|ref|ZP_18807809.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|428945467|ref|ZP_19018081.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|428951601|ref|ZP_19023707.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|428957463|ref|ZP_19029130.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|428963788|ref|ZP_19034949.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|428970085|ref|ZP_19040698.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|428976320|ref|ZP_19046474.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|428982164|ref|ZP_19051881.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|428988392|ref|ZP_19057659.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|428994192|ref|ZP_19063083.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|429000330|ref|ZP_19068816.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|429006513|ref|ZP_19074403.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|429012847|ref|ZP_19080084.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|429019033|ref|ZP_19085798.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|429024771|ref|ZP_19091161.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|429031104|ref|ZP_19096955.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|429037257|ref|ZP_19102681.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|429043208|ref|ZP_19108188.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|429054348|ref|ZP_19118821.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|429059993|ref|ZP_19124125.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|429065501|ref|ZP_19129341.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429072024|ref|ZP_19135370.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|429077351|ref|ZP_19140559.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|429824593|ref|ZP_19356063.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429830949|ref|ZP_19361762.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444923286|ref|ZP_21242964.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444929588|ref|ZP_21248728.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444934879|ref|ZP_21253805.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444940477|ref|ZP_21259112.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444945996|ref|ZP_21264407.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444951622|ref|ZP_21269834.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444957096|ref|ZP_21275083.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444962346|ref|ZP_21280084.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444968098|ref|ZP_21285564.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444973600|ref|ZP_21290868.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444979146|ref|ZP_21296131.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444984435|ref|ZP_21301295.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444989680|ref|ZP_21306411.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444995028|ref|ZP_21311616.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|445000539|ref|ZP_21316993.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|445005998|ref|ZP_21322328.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|445011109|ref|ZP_21327293.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|445016943|ref|ZP_21332985.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|445022379|ref|ZP_21338293.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|445027636|ref|ZP_21343404.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|445033139|ref|ZP_21348751.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|445038828|ref|ZP_21354290.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|445044128|ref|ZP_21359455.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|445049620|ref|ZP_21364776.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|445055272|ref|ZP_21370213.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein
[Escherichia coli O157:H7 str. EDL933]
gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli
O157:H7 str. Sakai]
gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4115]
gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. TW14359]
gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|374357957|gb|AEZ39664.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. RM12579]
gi|377899613|gb|EHU63959.1| potF [Escherichia coli DEC3A]
gi|377901563|gb|EHU65879.1| potF [Escherichia coli DEC3B]
gi|377913174|gb|EHU77318.1| potF [Escherichia coli DEC3C]
gi|377917240|gb|EHU81305.1| potF [Escherichia coli DEC3D]
gi|377919920|gb|EHU83954.1| potF [Escherichia coli DEC3E]
gi|377931012|gb|EHU94882.1| potF [Escherichia coli DEC3F]
gi|377933372|gb|EHU97217.1| potF [Escherichia coli DEC4A]
gi|377938272|gb|EHV02040.1| potF [Escherichia coli DEC4B]
gi|377949065|gb|EHV12705.1| potF [Escherichia coli DEC4C]
gi|377950236|gb|EHV13864.1| potF [Escherichia coli DEC4D]
gi|377953808|gb|EHV17372.1| potF [Escherichia coli DEC4E]
gi|377964471|gb|EHV27906.1| potF [Escherichia coli DEC5A]
gi|377966369|gb|EHV29781.1| potF [Escherichia coli DEC4F]
gi|377971052|gb|EHV34409.1| potF [Escherichia coli DEC5B]
gi|377979034|gb|EHV42312.1| potF [Escherichia coli DEC5C]
gi|377979228|gb|EHV42505.1| potF [Escherichia coli DEC5D]
gi|377986533|gb|EHV49723.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|386794923|gb|AFJ27957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli Xuzhou21]
gi|390649846|gb|EIN28318.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|390651735|gb|EIN30005.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|390652334|gb|EIN30558.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|390669119|gb|EIN45824.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|390671954|gb|EIN48323.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|390672408|gb|EIN48710.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|390687857|gb|EIN63002.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|390690748|gb|EIN65534.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|390691427|gb|EIN66175.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|390707547|gb|EIN80891.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|390709358|gb|EIN82468.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|390710585|gb|EIN83603.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|390719497|gb|EIN92222.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|390732637|gb|EIO04322.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|390732735|gb|EIO04413.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|390735312|gb|EIO06706.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|390750969|gb|EIO20945.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|390751331|gb|EIO21246.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|390754208|gb|EIO23830.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|390762025|gb|EIO31295.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|390775337|gb|EIO43404.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|390776898|gb|EIO44777.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|390780850|gb|EIO48540.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|390784876|gb|EIO52432.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|390794140|gb|EIO61439.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|390801078|gb|EIO68144.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|390808183|gb|EIO75029.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|390811385|gb|EIO78099.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|390818724|gb|EIO85093.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|390821550|gb|EIO87733.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|390836209|gb|EIP00762.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|390838943|gb|EIP03120.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|390839560|gb|EIP03661.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|390854808|gb|EIP17585.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|390857497|gb|EIP19925.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|390857924|gb|EIP20345.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|390870573|gb|EIP32074.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|390875019|gb|EIP36101.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|390884737|gb|EIP45010.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|390887235|gb|EIP47221.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|390893064|gb|EIP52632.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|390903518|gb|EIP62564.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|390908495|gb|EIP67318.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|390911438|gb|EIP70143.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|390913492|gb|EIP72078.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|390924171|gb|EIP81973.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|390925768|gb|EIP83401.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|408071679|gb|EKH06014.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|408075796|gb|EKH10028.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|408085451|gb|EKH19075.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|408089287|gb|EKH22618.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|408094081|gb|EKH27126.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|408101117|gb|EKH33586.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|408109370|gb|EKH41297.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|408115823|gb|EKH47188.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|408121136|gb|EKH52100.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|408129305|gb|EKH59538.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|408131027|gb|EKH61088.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|408140179|gb|EKH69714.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|408149503|gb|EKH78181.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|408151363|gb|EKH79871.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|408156509|gb|EKH84711.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|408166220|gb|EKH93838.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|408170931|gb|EKH98081.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|408172925|gb|EKH99977.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|408186208|gb|EKI12315.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|408190227|gb|EKI15898.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|408190518|gb|EKI16163.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|408231932|gb|EKI55192.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|408237541|gb|EKI60396.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|408248449|gb|EKI70498.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|408252163|gb|EKI73860.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|408258338|gb|EKI79612.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|408267294|gb|EKI87758.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|408268977|gb|EKI89299.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|408278245|gb|EKI98007.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|408284083|gb|EKJ03212.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|408286693|gb|EKJ05612.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|408299337|gb|EKJ17148.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|408299613|gb|EKJ17384.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|408315542|gb|EKJ31857.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|408315977|gb|EKJ32275.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|408330518|gb|EKJ45781.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|408335392|gb|EKJ50238.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|408337053|gb|EKJ51799.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|408349769|gb|EKJ63691.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|408352658|gb|EKJ66202.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|408557774|gb|EKK34197.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|408558042|gb|EKK34457.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|408558495|gb|EKK34859.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|408584608|gb|EKK59608.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|408588631|gb|EKK63203.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|408589636|gb|EKK64138.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|408603451|gb|EKK77092.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|408605201|gb|EKK78730.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|408606704|gb|EKK80130.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|408616403|gb|EKK89558.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|427213627|gb|EKV83032.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|427215477|gb|EKV84659.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|427215607|gb|EKV84779.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|427232863|gb|EKW00662.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|427233218|gb|EKW01004.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|427234674|gb|EKW02351.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|427250446|gb|EKW17117.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|427252048|gb|EKW18570.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|427253304|gb|EKW19746.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|427269565|gb|EKW34522.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|427269724|gb|EKW34676.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|427274058|gb|EKW38723.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|427285691|gb|EKW49630.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|427291178|gb|EKW54622.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|427292734|gb|EKW56061.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|427305378|gb|EKW67973.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|427309436|gb|EKW71754.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|427320592|gb|EKW82347.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|427321409|gb|EKW83103.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|427333243|gb|EKW94353.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|427333455|gb|EKW94560.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|427336396|gb|EKW97374.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429259352|gb|EKY43049.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429261409|gb|EKY44854.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444541887|gb|ELV21323.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444549449|gb|ELV27692.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444551304|gb|ELV29275.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444564170|gb|ELV41127.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444566023|gb|ELV42861.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444570228|gb|ELV46770.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444581156|gb|ELV57024.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444584205|gb|ELV59856.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444585293|gb|ELV60871.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444598736|gb|ELV73649.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444599301|gb|ELV74191.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444606929|gb|ELV81530.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444613461|gb|ELV87720.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444613578|gb|ELV87836.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|444621892|gb|ELV95860.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|444631250|gb|ELW04854.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|444631514|gb|ELW05112.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|444636282|gb|ELW09684.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|444646662|gb|ELW19664.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|444649330|gb|ELW22231.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|444652302|gb|ELW25065.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|444661777|gb|ELW34065.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|444665940|gb|ELW38034.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|444672019|gb|ELW43779.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|444674070|gb|ELW45654.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|421165155|ref|ZP_15623497.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404542820|gb|EKA52128.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
Length = 365
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRP 297
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 298 EVIAKVSDYVGYANA-------IPGARP--LMDKSVSDSEEVYPPQAVLDKLYVSAVLPA 348
Query: 217 EIL 219
++L
Sbjct: 349 KVL 351
>gi|366086397|ref|ZP_09452882.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
zeae KCTC 3804]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV- 70
E DP G + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 125 EFDP-GNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWNQLWNPKFKDSIMLIDSARDVF 180
Query: 71 ------IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS--- 106
+G + N LA +Q + ++KA + +AV WS
Sbjct: 181 APALISMGQSVNETNPQTLAVAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S++L KH+ VVP+ G++LW D IP ++
Sbjct: 241 SEMLANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|386618312|ref|YP_006137892.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|432420929|ref|ZP_19663484.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|432557835|ref|ZP_19794524.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|432709652|ref|ZP_19944717.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
gi|333968813|gb|AEG35618.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|430946546|gb|ELC66469.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|431093913|gb|ELD99569.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|431251354|gb|ELF45371.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|415836956|ref|ZP_11519206.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|417282938|ref|ZP_12070236.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|425276803|ref|ZP_18668129.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|386244143|gb|EII85875.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|408206064|gb|EKI30883.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|261208789|ref|ZP_05923226.1| extracellular solute-binding protein family 1 [Enterococcus faecium
TC 6]
gi|289566420|ref|ZP_06446847.1| spermidine/putrescine transport system substrate-binding protein
[Enterococcus faecium D344SRF]
gi|293567486|ref|ZP_06678832.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1071]
gi|294614451|ref|ZP_06694367.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1636]
gi|430849128|ref|ZP_19466909.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1185]
gi|260077291|gb|EEW65011.1| extracellular solute-binding protein family 1 [Enterococcus faecium
TC 6]
gi|289161795|gb|EFD09668.1| spermidine/putrescine transport system substrate-binding protein
[Enterococcus faecium D344SRF]
gi|291589795|gb|EFF21597.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1071]
gi|291592759|gb|EFF24352.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecium E1636]
gi|430537974|gb|ELA78273.1| spermidine/putrescine ABC transporter substrate-binding periplasmic
protein PotD [Enterococcus faecium E1185]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y F + I+ W DLW+PEL + +++ REV+
Sbjct: 125 DFDPDNQ-YSIPYFWGTLGIVYNDKFF---DADQIKHWDDLWKPELKDSLMLIDGAREVM 180
Query: 72 G----SIAVQLN------LALLANQSAH-----------HLKAFGIG-DVWVAVGWS--- 106
G S+ LN L AN+ H +K + I + VAV +S
Sbjct: 181 GLSLNSLGYSLNSKNMAQLTEAANKLNHLTPNVKAIVADEIKMYMINEEASVAVTFSGEA 240
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+D++ +H+ V+P G++LW D +P +
Sbjct: 241 ADMMWENEHLH--YVIPPEGSNLWFDNIVMPKTVK 273
>gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|417672890|ref|ZP_12322349.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
Length = 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 30/153 (19%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP+ +APY WG I+Y PI WKDLW + A ++ +++ R+V
Sbjct: 116 EFDPKND-YSAPYVWGVTGISYNSELVT----TPITGWKDLWNADFARQVMLLDDVRDVF 170
Query: 72 G-SIAVQ---LNLA-------------------LLANQSAHHLKAFGIGDVWVAVGWSSD 108
G ++ Q +N ++ N A H+ + G+ + + W+ +
Sbjct: 171 GMALKAQGHSINTTNEAEIKQAYESLQKLRPNVVVYNSDAPHV-PYVTGEASIGMQWNGN 229
Query: 109 VLPAVKHMSNVAVV-PKSGASLWADLWAIPAAS 140
A + M + V PK G+ LW D + IPA S
Sbjct: 230 AYMAKQEMKELEFVYPKEGSILWMDNFIIPAGS 262
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 63/249 (25%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 64
E DP G A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 65 NSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWV 101
++P E+ ++ A L L L N S+ ++ GD+ V
Sbjct: 180 DAPAEIYATVLNYQGKNPNSATEADYTKDATDLLLKLRPNIRYFHSSQYINDLANGDICV 239
Query: 102 AVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRVRG 153
A+GW+ DV+ A K+ N++ +PK GA + D++AIP A L++
Sbjct: 240 AIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA-------- 291
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
+Q++ + L K EVI S + K L+K + + N+
Sbjct: 292 -----YQFLNYLL--------KPEVIANVSNHVYYANPNKEATALVKDEVRNNPNI---Y 335
Query: 214 PPAEILARF 222
PPA+I A+
Sbjct: 336 PPADIRAKL 344
>gi|15675088|ref|NP_269262.1| spermidine/putrescine ABC transporter periplasmic transport protein
[Streptococcus pyogenes SF370]
gi|21910303|ref|NP_664571.1| spermidine/putrescine ABC transporter (periplasmic transport
protein) [Streptococcus pyogenes MGAS315]
gi|28895879|ref|NP_802229.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus pyogenes SSI-1]
gi|50914173|ref|YP_060145.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10394]
gi|56808699|ref|ZP_00366420.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Streptococcus pyogenes M49 591]
gi|71903471|ref|YP_280274.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS6180]
gi|71910642|ref|YP_282192.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS5005]
gi|94988578|ref|YP_596679.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS9429]
gi|94992400|ref|YP_600499.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS2096]
gi|94994376|ref|YP_602474.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10750]
gi|306827388|ref|ZP_07460675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus pyogenes
ATCC 10782]
gi|386362650|ref|YP_006071981.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes Alab49]
gi|410680501|ref|YP_006932903.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes A20]
gi|417856910|ref|ZP_12501969.1| spermidine/putrescine-binding protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|421893326|ref|ZP_16323860.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Streptococcus pyogenes NS88.2]
gi|13622244|gb|AAK33983.1| putative spermidine/putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes M1 GAS]
gi|21904499|gb|AAM79374.1| putative spermidine/putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes MGAS315]
gi|28811129|dbj|BAC64062.1| putative spermidine / putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes SSI-1]
gi|50903247|gb|AAT86962.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10394]
gi|71802566|gb|AAX71919.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS6180]
gi|71853424|gb|AAZ51447.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS5005]
gi|94542086|gb|ABF32135.1| spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS9429]
gi|94543962|gb|ABF34010.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10270]
gi|94545908|gb|ABF35955.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS2096]
gi|94547884|gb|ABF37930.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes
MGAS10750]
gi|304430535|gb|EFM33557.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus pyogenes
ATCC 10782]
gi|350277059|gb|AEQ24427.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes Alab49]
gi|379980924|emb|CCG27582.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Streptococcus pyogenes NS88.2]
gi|387933865|gb|EIK41978.1| spermidine/putrescine-binding protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395453877|dbj|BAM30216.1| spermidine/putrescine-binding protein [Streptococcus pyogenes M1
476]
gi|409693090|gb|AFV37950.1| bacterial extracellular solute-binding family protein
[Streptococcus pyogenes A20]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPQND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|19746056|ref|NP_607192.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus pyogenes MGAS8232]
gi|19748225|gb|AAL97691.1| putative spermidine / putrescine ABC transporter (periplasmic
transport protein) [Streptococcus pyogenes MGAS8232]
Length = 357
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPQND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 52 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 110
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 111 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 170
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 171 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 215
>gi|330501041|ref|YP_004377910.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915327|gb|AEB56158.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 364
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 46/175 (26%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-- 60
L +ND G PY +GTV+I Y K + + AP+ W +++PE +
Sbjct: 115 LEKNDPGNQ------YGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLK 168
Query: 61 ---ISMVNSPREVIGSIAVQLNLALLAN------------------------QSAHHLKA 93
++M++SP E+I IA+ L L N SA ++
Sbjct: 169 SCGVAMLDSPTEII-PIALHY-LGLDPNSTNPADYDKVTELLLKVRPYVTYFHSAKYMTD 226
Query: 94 FGIGDVWVAVGWSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
GD+ VAVG+S K N + PK GA +W D WAIP +++
Sbjct: 227 IANGDICVAVGYSGSFYQFANRAKEAGNGVTINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|15595498|ref|NP_248992.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099282|ref|ZP_01363200.1| hypothetical protein PaerPA_01000294 [Pseudomonas aeruginosa PACS2]
gi|116054027|ref|YP_788470.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889041|ref|YP_002437905.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254243398|ref|ZP_04936720.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386794|ref|ZP_06876293.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112088|ref|ZP_07797872.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646504|ref|ZP_09054459.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|386063282|ref|YP_005978586.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416878351|ref|ZP_11920375.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584347|ref|ZP_13148409.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591159|ref|ZP_13155060.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136865|ref|ZP_14644878.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|421157298|ref|ZP_15616680.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421172021|ref|ZP_15629801.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178211|ref|ZP_15635826.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|421514913|ref|ZP_15961599.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|424943286|ref|ZP_18359049.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|451984064|ref|ZP_21932323.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|9946146|gb|AAG03690.1|AE004468_2 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589248|gb|ABJ15263.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196776|gb|EAZ60839.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769264|emb|CAW25024.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884374|gb|EFQ42968.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|334838401|gb|EGM17123.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|346059732|dbj|GAA19615.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|348031841|dbj|BAK87201.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828463|gb|EHF12583.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|375045845|gb|EHS38418.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050052|gb|EHS42538.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403250363|gb|EJY63806.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|404348641|gb|EJZ74978.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|404538248|gb|EKA47791.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404548541|gb|EKA57488.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550731|gb|EKA59455.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|451758300|emb|CCQ84846.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 365
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E++ + L L + S+ ++ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRP 297
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 298 EVIAKVSDYVGYANA-------IPGARP--LMDKSVSDSEEVYPPQAVLDKLYVSAVLPA 348
Query: 217 EIL 219
++L
Sbjct: 349 KVL 351
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 42/175 (24%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + ++ I+ W L+ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALSVDKIDSWSVLFEPENAQKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
I+ ++S E+I ++ L L + +A + KA
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLE 143
G++ VA G+S DV A K + +PK G +LW D+ AIPA AS +E
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNVE 281
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 42 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 100
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 101 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 160
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 161 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 205
>gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 360
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 1 SRVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKD--LWRPELA 58
RV+ N DP G A PY WGT I + + + E D ++ P
Sbjct: 117 DRVFFENN----FDP-GLRYAVPYAWGTTGIGVNRDYVAEGEIEGYEQLFDTKVFLPRHK 171
Query: 59 GRISMVNSPREVIGS----IAVQLN----------LALLANQ---------SAHHLKAFG 95
G++SM+ EV+ + + + LN + LL Q ++ ++ A
Sbjct: 172 GKVSMLEEFLEVVNAAKLYLGIPLNDWSEESKQRIIELLREQRDFLAGYYGASVYIPALA 231
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGL 154
GD+ A WS DV+ A +V V+PK GA +W D IP +R
Sbjct: 232 KGDLHAAHAWSGDVVQAQSENKSVEYVLPKEGAFVWIDFMVIPVNAR------------- 278
Query: 155 SP-LIHQWIEFCLQTARAL----------PFKQEVIPG 181
SP L ++WI F L A A P K+E++ G
Sbjct: 279 SPDLAYEWINFLLDPAVAAKNSSYTYYPSPVKRELLEG 316
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPGNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|116334427|ref|YP_795954.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
brevis ATCC 367]
gi|116099774|gb|ABJ64923.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
brevis ATCC 367]
Length = 356
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 31/165 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY WGT+ I Y K+ K + ++ W+DLW P +I +++S R+++G
Sbjct: 128 RDNRYSIPYFWGTLGIVYN-DKYVK--ASEVQHWQDLWSPRWKKQIMLIDSARDIMGMAL 184
Query: 76 VQLNLA--------LLANQS-------------AHHLKAFGIGD-VWVAVGWS---SDVL 110
+ L + LLA Q A +K + I D +AV WS +++L
Sbjct: 185 ITLGKSMNTTNPQTLLAAQKKLDQLSPNVKAIVADEIKMYMIQDEAPLAVDWSGEAAEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLS 155
H+ VVP+ G++LW D IP ++ TK I + +S
Sbjct: 245 AGNSHLH--YVVPREGSNLWFDNLVIPKTAQ-HTKAIYAFLNFMS 286
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 43 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 101
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 102 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 161
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 162 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 206
>gi|119775774|ref|YP_928514.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
gi|119768274|gb|ABM00845.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
Length = 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 37/160 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I + +K ++ AP++ W ++ P A + I++++S
Sbjct: 121 DP-GNEHAVPYLWGTTGIGFNVAKVKEVLGEDAPVDSWDLIFNPANAEKLAKCGIAVLDS 179
Query: 67 PREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P E++ G + +++ L S+ ++ G++ A+G
Sbjct: 180 PDEILPPALNYLGLNPNSTDPADYEKAGEVLLKIRPYLKYFHSSRYISDLANGEICAAIG 239
Query: 105 WSSDVLPAVKHMSNVAV-------VPKSGASLWADLWAIP 137
WS DVL A +PK GA LW D+ AIP
Sbjct: 240 WSGDVLQAQARAEEAGNGQQVDYRIPKEGAPLWFDMMAIP 279
>gi|395244760|ref|ZP_10421714.1| Spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus hominis
CRBIP 24.179]
gi|394482966|emb|CCI82722.1| Spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus hominis
CRBIP 24.179]
Length = 357
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 45/207 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y +K I+ W DLW+ I +V+S R+++G +N
Sbjct: 133 SIPYFWGTLGIVYNDKYIKK---GSIQHWNDLWKNNYRHDILLVDSARDIMGMSLASMNY 189
Query: 81 ALLANQS---------------------AHHLKAFGI-GDVWVAVGWSSD---VLPAVKH 115
++ S + LK + I + + V WS + +L H
Sbjct: 190 SMNTKNSLELKLAKTKLDGLGPNVKAIISDELKMYMIQNEAPIGVTWSGEARTMLDQNPH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFK 175
+ VVP G++LW D + IP + +T +++I F L A
Sbjct: 250 LH--YVVPSEGSNLWFDNFVIPKTVKNKTGA------------YKFINFMLDPKNAAQ-N 294
Query: 176 QEVIPGASPSALESTLVKLPGELLKGK 202
E I ++P++L +LP +L K
Sbjct: 295 AEYIGYSTPNSLAKK--QLPAKLRNDK 319
>gi|357236516|ref|ZP_09123859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
criceti HS-6]
gi|356884498|gb|EHI74698.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
criceti HS-6]
Length = 357
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 32/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y + + P + W DLW P I +++ REV+G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDQQVKN----PPQHWTDLWNPRYKNAIMLIDGAREVMG 181
Query: 73 ----SIAVQLNLALLA---------NQSAHHLKA---------FGIGDVWVAVGWSS--- 107
++ LN + NQ ++KA GD + V +S
Sbjct: 182 LGLNALGYSLNTKNMEQLNQASDKLNQLTPNIKAIVGDEMKGYLKNGDAALGVTFSGEAR 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
D+L A H+ V+P G++LW D IP +
Sbjct: 242 DMLDANSHLH--YVLPSEGSNLWFDNIVIPKTVK 273
>gi|313889189|ref|ZP_07822843.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844743|gb|EFR32150.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 289
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGTV I + K++ + ++ W LW + +I M NS R+ +G
Sbjct: 121 FDPENK-YSVPYFWGTVGIVFNKAEVKDK----VDSWDILWNEKYKNQIIMYNSQRDTLG 175
Query: 73 SIAVQLNLALLANQSAH-----------------HLKAFG-----IGDVWVAVGWSSDVL 110
+L +L + +L G GD ++V +S D L
Sbjct: 176 VALKRLGYSLNSTNEKELQEAKKSLIEQKPLVYAYLDDDGRDVVVQGDANLSVMYSGDAL 235
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVPK G+++W D IP ++ V G I+ +E +Q
Sbjct: 236 LMMQQNEDLDYVVPKEGSNIWYDSMVIPKNAQ--------NVEGAEKFINYMLEKEVQAK 287
Query: 170 R 170
+
Sbjct: 288 K 288
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRP----ELAG-RISMVNS 66
DP G A PY WGTV + Y K R AP++ W+ ++ +L G ++ +++
Sbjct: 116 DP-GNKYAVPYMWGTVGVGYNAEKVRAALGEGAPVDSWELVFNAGNLAKLKGCGVAFLDA 174
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
P ++I L + ALL S+ ++ GD+ VAVG
Sbjct: 175 PVKIIPQALHYLGMDPNSHDPDDYTKASALLQKLAPSVTYFHSSRYISDLANGDICVAVG 234
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
+S DV+ A + V+PK GA+LW D+ AIP +R
Sbjct: 235 YSGDVMQAQSRAKDAGKSVDIRYVIPKEGANLWFDMLAIPCDAR 278
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y ++K ++ AP++ + ++ P+ A ++S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNEAKVKEVLGEDAPVDSLELIFNPKYASKLSKCGLSFLDS 179
Query: 67 PREVIGSIAVQLNLA----------------------LLANQSAHHLKAFGIGDVWVAVG 104
E++ + L L + S+ ++ GD+ VAVG
Sbjct: 180 ADEMVPMALIYLGLDPNSSKKDDFKRAGEVLEAIRPHITYFHSSRYITDLANGDLCVAVG 239
Query: 105 WSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
+S D+L A + N V+ PK GA+LW D+ AIPA + +
Sbjct: 240 YSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDMLAIPADAANVSNA----------- 288
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
H +I + L+ P V A+P+A LV + ++ P + P E
Sbjct: 289 -HTFINYLLRPEVIAPISNYV-SYANPNAAAQDLVD---DEIRNDPGI-------YPTDE 336
Query: 218 ILARF 222
+L R
Sbjct: 337 VLKRL 341
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 42/175 (24%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + + I+ W L+ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWSVLFEPENAQKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
I+ ++S E+I ++ L L + +A + KA
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLE 143
G++ VA G+S DV A K + +PK G +LW D+ AIPA AS +E
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNVE 281
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 95/241 (39%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K + + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNAHSVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIA----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I +Q+ + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDFKKAEAKLLQIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAVKHMS------NVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A N+A +PK GA+LW DL AIPA + + L P +
Sbjct: 237 SGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPADASNPKEAHAFINYLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P A+ ++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSASVGYANPNP--------AAKQYMDPELVSNP-EVYPPQEVLDKLYISTTPPQSI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|260769730|ref|ZP_05878663.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|375133100|ref|YP_005049508.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
gi|260615068|gb|EEX40254.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|315182275|gb|ADT89188.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
Length = 344
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 57/247 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ K + PY WG ++Y ++ + I WKDLW + A ++ +++ R+V G
Sbjct: 117 DPQNK-YSLPYIWGVTGLSYNEAMIPEG----ITQWKDLWNSKYAQQVMLIDDIRDVFG- 170
Query: 74 IAVQLN------------------LA------LLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LA LL N A H+ + G+ + + W+ +
Sbjct: 171 MALKLNGYSINTKNEKEIEQAYQSLAALKDNVLLYNSDAPHV-PYVSGEASLGMQWNGNA 229
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ M + V+P GA LW D + IP+ S + L H++I F Q
Sbjct: 230 YQGQQEMPELKFVMPAEGAVLWMDNFTIPSGSEHKA------------LAHKFINFMYQP 277
Query: 169 ARALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
+ E++ SA +S LP E L+ ++ P E +A+ EF+
Sbjct: 278 EN----QAEIVNSLGYASATKSGRALLP-EALRNNATI-------FPAEEDMAKGEFIND 325
Query: 228 LSEATLS 234
+ L+
Sbjct: 326 VGPQALA 332
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 30/148 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 71
DP + + P+ WGT Y K P EDW+ +W R L R++++N REV+
Sbjct: 137 DPNNR-YSIPFTWGTTGFIYNSEKLT----TPPEDWEYIWQNRDILNKRMTLMNDSREVM 191
Query: 72 GSIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDV 109
G+ L + A A+ GD+ +A+ +SSD
Sbjct: 192 GAALKMLGYSYNATDETQIKAAYEKLKEIKDSISSFDTDAWRSKIVTGDLDLAMSYSSDA 251
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAI 136
+ K + V+PKSG SLW D I
Sbjct: 252 IKLTKENPKLKYVIPKSGTSLWTDTLVI 279
>gi|397688815|ref|YP_006526134.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810371|gb|AFN79776.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 48/225 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G + PY WGT+ I Y K + + AP++ W +++PE + ++ ++S
Sbjct: 120 DP-GNQYSVPYMWGTIGIGYNPEKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 67 PREVIGS----------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P E++ + + +Q+ + S+ ++ G++ VA+G
Sbjct: 179 PTEMLPAALHYLGYASDSGKADELKKAEELFLQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 105 WSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIG----GRVR 152
+S D+ A ++ NV+ +PK GA + D+ AIPA A +E +
Sbjct: 239 YSGDIYQAKSRAEDAQNGVNVSYNIPKEGAGSFFDMLAIPADAKNVENAHAFLNYLLKPE 298
Query: 153 GLSPLIHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 194
++P++ +++F A A P E I PG PS ++ L KL
Sbjct: 299 VMAPIV-DYVQFPSANAAATPLVDEAIRTDPGIYPS--QAVLQKL 340
>gi|388544023|ref|ZP_10147312.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388277851|gb|EIK97424.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 363
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 66/255 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY +GT++I + +K ++ + AP++ W ++ + + ++M++S
Sbjct: 118 DP-GNKYAVPYMYGTILIGFNPAKVKQALGDNAPVDSWDLIFNEDNIKKLKQCGVAMLDS 176
Query: 67 PREVIGSIAVQLNLALLAN------------------------QSAHHLKAFGIGDVWVA 102
P E++ +A+Q +L L N S+ ++ GD+ VA
Sbjct: 177 PSEIL-PLALQ-HLGLDPNSSKPEDYKKAEALMLKIRPYITYFHSSKYMADIANGDICVA 234
Query: 103 VGWSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIP-AASRLETKQIGGRVRGL 154
VG+S A + N VV PK GA +W D+ AIP A+ +E
Sbjct: 235 VGYSGSFSQAANRARDAKNGVVVDMRLPKEGAPIWFDMLAIPKGAANIEDA--------- 285
Query: 155 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVP 214
H +I + LQ P V P+ + K+ E ++ P+L P
Sbjct: 286 ----HTFINYLLQPQVIAPISDFV---GYPNPNKDATAKV-SEAIRNNPNL-------YP 330
Query: 215 PAEILARFEFLEPLS 229
E++A+ L+PL
Sbjct: 331 TDEMMAKLYTLKPLD 345
>gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423065114|ref|ZP_17053904.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406713407|gb|EKD08577.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 363
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 69
+ DP + P WGT + Y R +P EDW+DLW + +L+ R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLPNSP-EDWEDLWTYQDQLSRRLTLLNDVRE 186
Query: 70 VIGSIAVQLNLALLA------NQSAHHL-KAFG---------------IGDVWVAVGWSS 107
V+G+ +L + + NQ+ L K G +GD+ +A+ +SS
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSS 246
Query: 108 D---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEF 164
D V+P + + + P SG+SLW D IP ++ G +QWI F
Sbjct: 247 DAAEVMPENEDLE--YITPVSGSSLWIDTLVIPKSA---PNPEGA---------YQWINF 292
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEF 224
L+ A E + A+PS + +LP E L+ P+L PP ++A E
Sbjct: 293 MLRPDIATQIV-ERLSFATPSLV--AYRQLPQE-LREDPAL-------FPPESVIANSET 341
Query: 225 LEPL 228
+ PL
Sbjct: 342 VSPL 345
>gi|127511906|ref|YP_001093103.1| extracellular solute-binding protein [Shewanella loihica PV-4]
gi|126637201|gb|ABO22844.1| extracellular solute-binding protein, family 1 [Shewanella loihica
PV-4]
Length = 366
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRI-----SMVNS 66
DPR + A PY WGT I Y ++K ++ AP++ + ++ P+ A +I S+++S
Sbjct: 121 DPRNE-HAVPYLWGTTGIGYNEAKVKQVLGEDAPVDSLELIFNPKYAEKIAKCGFSLLDS 179
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
E++ + L L + +S + KA GD+ VA G
Sbjct: 180 ADEMLPMAMIYLGLDPNSTKSEDYAKAGEVMAKIRPFVTYFHSSRYITDLANGDICVAFG 239
Query: 105 WSSDVLPAVKHM-----SNV--AVVPKSGASLWADLWAIPAASR 141
+S DV A NV +PK G++LW D+ AIPA ++
Sbjct: 240 YSGDVFQAAARAEEAENGNVIGYAIPKEGSNLWFDMLAIPADAK 283
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W +++PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGADAPVNSWDLIFKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNVRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVN 65
+DP + PY WGT I Y K + AP+ W +++PE + + +N
Sbjct: 123 VDPENA-YSVPYLWGTTGIGYNVEKVKAALGEDAPVNSWDLVFKPENMEKLAKCGVGFLN 181
Query: 66 SPREVIGSIAVQLN------------------LALLAN--------QSAHHLKAFGIGDV 99
+P E++ A LN L LL S+ ++ GD+
Sbjct: 182 APSEIM---AASLNYIGKDPNSTDPNDYKKDALELLKTVRPYVTYFHSSQYINDLANGDI 238
Query: 100 WVAVGWSSDVLPAVKHMSN-------VAVVPKSGASLWADLWAIPAASR 141
VA+GWS DVL A + +PK GA W DL AIP ++
Sbjct: 239 CVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKDAK 287
>gi|409396641|ref|ZP_11247621.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118823|gb|EKM95214.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 365
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 47/219 (21%)
Query: 13 IDPR--GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
+DP G A PY WGT+ I Y K + + AP++ W +++PE + +S
Sbjct: 116 LDPSDPGNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSF 175
Query: 64 VNSPREVIGS----------------------IAVQLNLALLANQSAHHLKAFGIGDVWV 101
++SP E++ + + +Q+ + S+ ++ G+ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSGKADELKKAEELFMQIRPHVAYFHSSKYISDLANGETCV 235
Query: 102 AVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRVRG 153
A+G+S D+ A K+ NV +PK GA + D+ AIPA A +E +
Sbjct: 236 AIGYSGDIYQAKARAEEAKNGVNVGYKIPKEGAGSFFDMVAIPADAKNVENAHVFINYL- 294
Query: 154 LSP----LIHQWIEFCLQTARALPFKQEVI---PGASPS 185
+ P I +++F A + P E I PG PS
Sbjct: 295 MKPEVMASITDYVQFPNANAASTPLVAEAIRTDPGIYPS 333
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A Y WGT I Y K AP+ W ++ ++ + I ++++P
Sbjct: 118 DP-GNEYAINYMWGTTGIGYNVEKITAIMPDAPVGSWDMVFNKDIVSKFAECGIFVLDTP 176
Query: 68 REVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVAVGW 105
E+I + L L +N+ S+ ++ A GD+ +AVGW
Sbjct: 177 EEMIPAALNYLGLDPDSNETGDIEKAGELLLSIRPHIRKFHSSEYINALANGDICLAVGW 236
Query: 106 SSDVLP----AVKHMSNVA---VVPKSGASLWADLWAIPAASR 141
S D+L A + +NV V+PK GA +W D AIPA +R
Sbjct: 237 SGDILQARDRAAEAGNNVTVEYVIPKEGALMWFDNMAIPADAR 279
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 34/156 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP + + Y WG IAY K + + AP W DLW E G++ +++ RE+I
Sbjct: 118 EYDPDSE-HSIIYTWGVTGIAYNKKQIAE---APTS-WADLWNDEYKGKVLLLDDNREII 172
Query: 72 GSIAVQLNLALLANQSAH----------------HLKAFGIGDV---------WVAVGWS 106
G V L A +N + + ++ AF ++ W+ WS
Sbjct: 173 G---VALKKAGKSNSTDNEADINAAADDLRKLVPNVVAFDTDNIKQKMIQEEGWIGTVWS 229
Query: 107 SDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
D +VA VVP+ G++++AD +AIP ++
Sbjct: 230 GDAAFIAAENPDVAYVVPQEGSTIFADTYAIPKGAK 265
>gi|386727089|ref|YP_006193415.1| extracellular solute-binding protein [Paenibacillus mucilaginosus
K02]
gi|384094214|gb|AFH65650.1| extracellular solute-binding protein family 1 [Paenibacillus
mucilaginosus K02]
Length = 358
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 82/210 (39%), Gaps = 43/210 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I Y + W DLW +L +I +V+ REV+G
Sbjct: 126 FDP-GNKYSVPYFWGTVGIIYNPDLLEEG--KTFTSWNDLWDEKLENQILLVDGAREVMG 182
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD V V WS D
Sbjct: 183 MGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVKAI-VGDEIKMLLANEEAAVGVVWSGDA 241
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP + + G H +I F L
Sbjct: 242 SEIMDENDKLDYVVPEEGSNLWFDNMVIPKTAH--------NIEG----AHAFINFMLDP 289
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGEL 198
A E + ++P+ ES L LP E+
Sbjct: 290 EVAAQ-NAEYVGYSTPN--ESALEFLPEEI 316
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 63/249 (25%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 64
E DP G A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 65 NSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWV 101
++P E+ ++ A L L L N S+ ++ GD+ V
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTNESDYTKDATDLLLKLRPNIRYFHSSQYINDLANGDICV 239
Query: 102 AVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRVRG 153
A+GW+ DV+ A K+ N++ +PK GA + D++AIP A L++
Sbjct: 240 AIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA-------- 291
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
+Q++ + L+ V A+P+ + LVK + ++ P++
Sbjct: 292 -----YQFLNYLLKPEVIANISNHVY-YANPNKEATALVK---DDVRNNPNI-------Y 335
Query: 214 PPAEILARF 222
PPA+I A+
Sbjct: 336 PPADIRAKL 344
>gi|139473800|ref|YP_001128516.1| spermidine/putrescine extracellular binding protein [Streptococcus
pyogenes str. Manfredo]
gi|134272047|emb|CAM30286.1| spermidine/putrescine extracellular binding protein [Streptococcus
pyogenes str. Manfredo]
Length = 357
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y K AP+ W+DLWRPE I +++ RE++G
Sbjct: 127 FDPHND-YSLPYFWGTVGIVYNDQLVDK---APMH-WEDLWRPEYKNSIMLIDGAREMLG 181
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWS---S 107
+ +N L A +K + I GD + + +S S
Sbjct: 182 VGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVADEMKGYMIQGDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
++L + +H+ +VP G++LW D +P + E
Sbjct: 242 EMLDSNEHLH--YIVPSEGSNLWFDNLVLPKTMKHE 275
>gi|432801133|ref|ZP_20035118.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
gi|431350368|gb|ELG37180.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
Length = 370
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEGKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
Length = 344
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 53/245 (21%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY WG I+Y +S + PI W LW + A ++ +++ R+V G
Sbjct: 117 DPSNR-YSLPYIWGVTGISYNESLVEE----PITKWAQLWDAKYAQQVMLIDDIRDVFG- 170
Query: 74 IAVQLNLALLANQSAHHLKA-----------------------FGIGDVWVAVGWSSDVL 110
+A++LN + + + +K + G+ + + W+ +
Sbjct: 171 MALKLNGHSINSNNEQEIKQAYESLVALKDNVLLYNSDAPQMPYVAGETALGMQWNGNAY 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M+ + V+P+ GA LW D + IP+ S+ + L HQ+I F Q
Sbjct: 231 QGQAEMAELKFVMPEEGAVLWMDNFTIPSGSQNKA------------LAHQFIRFMYQPQ 278
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
+ + E++ +++ + L + LK ++ P E + + EF+ +
Sbjct: 279 Q----QAEIVNSLGYASVTQSGRALLVDELKNNATI-------FPSVEDIQKGEFINDVG 327
Query: 230 EATLS 234
TL+
Sbjct: 328 SETLA 332
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 67
G + PY WGT I Y + ++ + AP++ W L+ PE+ +S M++S
Sbjct: 124 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITSALSEAGCGLSMLDSA 183
Query: 68 REVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVGW 105
E++ G + ++ + S+ ++ GD+ VA G+
Sbjct: 184 DEMLSPAMAYLGFDPLSENLDDIEAAGELIAEVRDDMTYFHSSRYVSDLANGDICVAAGY 243
Query: 106 SSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA 138
S D+ A + + +PK GA+LW D+ A+PA
Sbjct: 244 SGDIFQAADRAEEAGRDFTIAYSIPKEGAALWFDMMAVPA 283
>gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
Length = 370
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNKF-AMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P EV ++ A L L L N S+ ++ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VA+GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 53/221 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVDKVKAALGADAPLDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A +L L L + S+ ++ GD+ VA+
Sbjct: 182 PEEIFATVLNYQGKDANSSKAADYNGSATELLLKLRPSIRYFHSSQYINDLANGDICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
GW+ DV+ A K+ NV +PK GA + D++A+PA + K I L+
Sbjct: 242 GWAGDVMQAANRAKEAKNGVNVHYSIPKEGALAFFDVFAVPA----DAKNIDAAYEFLNY 297
Query: 157 L--------IHQWIEFCLQTARALPFKQEVI---PGASPSA 186
L I + + A+P E I PG P A
Sbjct: 298 LLKPDVIANISNHVYYASANKEAVPLVNEEIRNDPGIYPPA 338
>gi|386817903|ref|ZP_10105121.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386422479|gb|EIJ36314.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 343
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 61/247 (24%)
Query: 11 GEIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 62
G +DP+ G + PY WG+ IA + + A I W DLW P+ G++
Sbjct: 103 GNLDPKLLDKPFDPGNGYSIPYMWGSTGIAVNAAAI---DPASITGWADLWEPKWKGKLL 159
Query: 63 MVNSPREVIG------------------SIAVQLNLALLANQSAHHLKA----FGIGDVW 100
+ + R + +A Q L+ N + A F GDV
Sbjct: 160 LTDDLRGIFDMALKKNGFSSNSTNPEEIKVAYQDLQKLMPNVRVFNADAPREPFLAGDVN 219
Query: 101 VAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
+ + WS + A K ++ + PK GASLW D AI A + H
Sbjct: 220 LGMIWSGEASQAQKENKDIHYIYPKEGASLWVDNLAITAGAENVDNA------------H 267
Query: 160 QWIEFCLQTARALPFKQ--EVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
++I++ L+ A KQ E + ++P+ LV E ++ P + PPAE
Sbjct: 268 KFIDYMLRPKVA---KQMVEKLGYSTPNTAARVLV---SEAIRNDPII-------FPPAE 314
Query: 218 ILARFEF 224
IL + EF
Sbjct: 315 ILEKGEF 321
>gi|313679879|ref|YP_004057618.1| extracellular solute-binding protein [Oceanithermus profundus DSM
14977]
gi|313152594|gb|ADR36445.1| extracellular solute-binding protein family 1 [Oceanithermus
profundus DSM 14977]
Length = 341
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 59/242 (24%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP-ELAGRISMVNSPREV 70
+ DP G + PY+WGT IAY+ S+ ++ P++ W + P + G +++ RE
Sbjct: 111 DYDP-GNRYSVPYQWGTTGIAYRASEVKQ----PVDSWGVFFDPAQYQGPFLLLDEMRET 165
Query: 71 IGSIAVQLNLALLANQSAH-----------HLKAFGI------------GDVWVAVGWSS 107
IG+ L +L AH + G GD V +S
Sbjct: 166 IGAALKYLGYSLNDTDPAHLEEAKQLLIDAKRRGLGFAGSVEGRSRLLAGDAVVVHNYSG 225
Query: 108 DVLPAVKHMSN-VAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCL 166
D+ + + V V+PK G ++W D A+PA + L + ++ F L
Sbjct: 226 DIFQIQEEDDDIVYVIPKEGGTIWMDAVAMPAGAPHPD------------LAYAFLNFIL 273
Query: 167 QTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLI---AGVPPAEILARFE 223
+ E+ S ++ V+ +P LD L+ A PP E+ A+ E
Sbjct: 274 EP--------EIAAAISNYNYYASPVQ------AAEPYLDPELLNDPAVYPPPEVRAKLE 319
Query: 224 FL 225
F+
Sbjct: 320 FI 321
>gi|322516302|ref|ZP_08069231.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus vestibularis
ATCC 49124]
gi|322125234|gb|EFX96610.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus vestibularis
ATCC 49124]
Length = 356
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW PE +I V+ REV+G
Sbjct: 126 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMFVDGAREVLG 180
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + I GD + V +S +
Sbjct: 181 FSLNSLGHSLNTKSMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
+ ++ VVP G++LW D IP + E + + +I F L+
Sbjct: 241 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPS 185
A E I A+P+
Sbjct: 289 NAAQ-NAEYIGYATPN 303
>gi|238854846|ref|ZP_04645176.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 269-3]
gi|260664133|ref|ZP_05864986.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii SJ-7A-US]
gi|313472348|ref|ZP_07812840.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
jensenii 1153]
gi|238832636|gb|EEQ24943.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 269-3]
gi|239529795|gb|EEQ68796.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Lactobacillus
jensenii 1153]
gi|260562019|gb|EEX27988.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii SJ-7A-US]
Length = 357
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 30/144 (20%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNLAL 82
PY WGT+ I Y K+ K + ++ W DLW P+ +I +V+S R+++G V L ++
Sbjct: 135 PYFWGTLGIIYN-DKYVKSD--EVQHWNDLWNPKWKNKILLVDSARDIMGFSLVSLGYSM 191
Query: 83 LANQS---------------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKHMS 117
S + +K + I + +AV WS S++L H+
Sbjct: 192 NTTNSVELKLAKTKLDSLGTNVKAIISDEIKMYMIQNEAALAVTWSGEASEMLDNNSHLH 251
Query: 118 NVAVVPKSGASLWADLWAIPAASR 141
VVP+ G++LW D IP ++
Sbjct: 252 --YVVPEEGSNLWFDNMVIPKTAK 273
>gi|420335058|ref|ZP_14836674.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
gi|391266552|gb|EIQ25501.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
Length = 370
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAT 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|352106290|ref|ZP_08961341.1| extracellular solute-binding protein [Halomonas sp. HAL1]
gi|350597938|gb|EHA14063.1| extracellular solute-binding protein [Halomonas sp. HAL1]
Length = 367
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 67
G + PY WGT I Y + ++ + AP++ W L+ PE+ G +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVERVKEILGDDAPLDSWALLFDPEITGALSEAGCGLSMLDSA 181
Query: 68 REVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVAVGW 105
E++ L L L+ S+ ++ GD+ VA G+
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDIEAAGELIASVRDDMTYFHSSRYVSDLANGDICVAAGY 241
Query: 106 SSDVLPAVK-------HMSNVAVVPKSGASLWADLWAIPA 138
S DV A S +PK GA+LW D+ A+PA
Sbjct: 242 SGDVFQAAARAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|357639409|ref|ZP_09137282.1| ABC transporter, solute-binding protein [Streptococcus urinalis
2285-97]
gi|418416363|ref|ZP_12989562.1| hypothetical protein HMPREF9318_00310 [Streptococcus urinalis
FB127-CNA-2]
gi|357587863|gb|EHJ57271.1| ABC transporter, solute-binding protein [Streptococcus urinalis
2285-97]
gi|410874181|gb|EKS22112.1| hypothetical protein HMPREF9318_00310 [Streptococcus urinalis
FB127-CNA-2]
Length = 357
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 60/239 (25%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG----SIA 75
+ PY WGTV I Y + P + W DLW E +I +V+ RE++G +
Sbjct: 133 YSIPYFWGTVGIVYNDQLVKN----PPKHWIDLWNSEYKNQIMLVDGAREIMGIGLNTYG 188
Query: 76 VQLNLALLANQS--------------------AHHLKAFGI-GDVWVAVGWS---SDVLP 111
LN NQ+ A +K + I GD + V +S S++L
Sbjct: 189 YSLN---TKNQAELIKVEKRLQGLTPNVKAIVADEMKGYMIQGDAAIGVTFSGEASEMLS 245
Query: 112 AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+ KH+ V+P+ G++LW D IP + + + + +I F L A
Sbjct: 246 SNKHLH--YVLPQEGSNLWFDNIVIPKTMKHKKEA------------YAFINFMLDPKNA 291
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
E I A+P+ L LP E+ + K A P E + E + L +
Sbjct: 292 AQ-NAEYIGYATPNEKAKEL--LPNEVKRDK--------AFYPDQETIKHLEVYDNLGD 339
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 35/151 (23%)
Query: 26 WGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPE----LAG-RISMVNSPREVIGSIAVQLN 79
WGTV I Y K ++ + ++ W ++PE LAG + +++SP ++I + L
Sbjct: 133 WGTVGIGYNVDKVKEALGVDKVDSWDVFYKPENLAKLAGCGVYVLDSPSDIIPTTLNYLG 192
Query: 80 LA---------------LLA-------NQSAHHLKAFGIGDVWVAVGWSSDVLPAVKHMS 117
L+ LLA S+ ++ A GD+ +A+GWS DV A +
Sbjct: 193 LSPESTSSEDFAKVEETLLALRPHIRKFHSSEYINALANGDICLAIGWSGDVFQARDRAA 252
Query: 118 NV-------AVVPKSGASLWADLWAIPAASR 141
V+PK GA +W D AIPA ++
Sbjct: 253 EADQGVVVDYVIPKEGAEMWFDQMAIPADAK 283
>gi|455643997|gb|EMF23118.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii GTC 09479]
Length = 370
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNKF-AMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P EV ++ A L L L N S+ ++ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VA+GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|58337032|ref|YP_193617.1| spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus acidophilus NCFM]
gi|227903595|ref|ZP_04021400.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus acidophilus
ATCC 4796]
gi|58254349|gb|AAV42586.1| spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus acidophilus NCFM]
gi|227868482|gb|EEJ75903.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus acidophilus
ATCC 4796]
Length = 357
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y KF K I+ W DLW + +I +V+S R+ +G V L
Sbjct: 133 SVPYFWGTLGIVYN-DKFVKQ--GAIKTWNDLWNKKYHHQILLVDSARDAMGMALVSLGY 189
Query: 81 ALLANQS---------------------AHHLKAFGI-GDVWVAVGWSSDVLPAVKHMSN 118
++ S + +K + + + V + WS + +++ S+
Sbjct: 190 SMNTTSSLKLQLAQTKLDGLGPNIKAIISDEMKMYMVQNEAAVGITWSGEAHEMMENNSH 249
Query: 119 V-AVVPKSGASLWADLWAIPAASR 141
+ VVPK G++LW D + +P ++
Sbjct: 250 LHYVVPKQGSNLWFDNFVVPKTAK 273
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 64/253 (25%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + + I+ W L+ P+ A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVLFEPQNAEKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGI 96
I+M++S E+I ++ L L LLA S+ ++
Sbjct: 167 CGIAMLDSADEMIPAMLNYLGLDPNSENPADYRKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGG 149
G++ VA G+S DV A K + +PK G +LW D+ AIPA + G
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADA--------G 278
Query: 150 RVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNL 209
V H +I++ L + EVI S + GEL+ + D ++
Sbjct: 279 NVEQ----AHAFIDYLL--------RPEVIASVSDYVGYANPNLKAGELMDQEVRNDPSI 326
Query: 210 IAGVPPAEILARF 222
PP ++L R
Sbjct: 327 ---YPPQDVLDRL 336
>gi|262403152|ref|ZP_06079712.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
gi|262350651|gb|EEY99784.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
Length = 344
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 55/246 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ K + PY WG + Y + I W DLW + ++ +++ R+V G
Sbjct: 117 DPQNK-YSLPYIWGITGLYYNSATLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A H+ + G+ + + W+ +
Sbjct: 172 ALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHV-PYVSGEATLGMQWNGNAY 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S K I PL H++I F Q
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGS----KNI--------PLAHKFINFMYQPE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ SA + LP E L+ P++ P E + + EF+ +
Sbjct: 279 N----QAEIVKSLGYASATKGGRALLPAE-LRDNPTI-------FPSEEDMKKGEFINDV 326
Query: 229 SEATLS 234
TL+
Sbjct: 327 GPETLA 332
>gi|398904320|ref|ZP_10652192.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398175972|gb|EJM63708.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 45/231 (19%)
Query: 9 DAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----I 61
+A DP G A PY WG++ I Y +K ++ AP+ W L++PE A + I
Sbjct: 115 NASASDP-GNSHAFPYMWGSIGIGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGI 173
Query: 62 SMVNSPREVIG----------------------SIAVQLNLALLANQSAHHLKAFGIGDV 99
S ++SP E++ ++ +++ ++ S+ ++ G++
Sbjct: 174 SFLDSPTEMLPAALHYLGYPVNSQDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNI 233
Query: 100 WVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRV 151
VAVG+S DVL A +PK GA + D+ AIP A+ ++ +
Sbjct: 234 CVAVGYSGDVLQAKARAKEAGDKVKVEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNF 293
Query: 152 RGLSPLIHQW---IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLP 195
+I + I + A A P E I PG+ P A+ +TL +P
Sbjct: 294 LMRPDIIAEVTNNIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIP 344
>gi|395227557|ref|ZP_10405883.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|421844409|ref|ZP_16277567.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|424728739|ref|ZP_18157344.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
gi|394718885|gb|EJF24506.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|411774564|gb|EKS58054.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422896610|gb|EKU36392.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
Length = 370
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNKF-AMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P EV ++ A L L L N S+ ++ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VA+GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|418613820|ref|ZP_13176818.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|420198916|ref|ZP_14704600.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
gi|374822486|gb|EHR86507.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|394272602|gb|EJE17052.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
Length = 357
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ +L I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ ++ V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTHYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP E+ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKEV--------RNDHRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
++LSD +
Sbjct: 340 SSLSDYN 346
>gi|417254724|ref|ZP_12046475.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
gi|419288390|ref|ZP_13830500.1| potF [Escherichia coli DEC11A]
gi|419293742|ref|ZP_13835797.1| potF [Escherichia coli DEC11B]
gi|378135268|gb|EHW96580.1| potF [Escherichia coli DEC11A]
gi|378145241|gb|EHX06407.1| potF [Escherichia coli DEC11B]
gi|386215006|gb|EII31503.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
Length = 370
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVLFSIPKEGAMAFFDVFAMPADAK 287
>gi|312865132|ref|ZP_07725360.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus downei F0415]
gi|311099243|gb|EFQ57459.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus downei F0415]
Length = 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 88/218 (40%), Gaps = 53/218 (24%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y S + P + W DLW + I +V+ REV+G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDSVVKN----PPQHWSDLWNSDYKDSIMLVDGAREVMG 181
Query: 73 ----SIAVQLN---------------------LALLANQSAHHLKAFGIGDVWVAVGWSS 107
S+ LN A++ ++ +LK GD + V +S
Sbjct: 182 LGLNSLGYSLNSKNRKQLDQASEKLSRLTPNIKAIVGDEMKGYLKN---GDATLGVTFSG 238
Query: 108 ---DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEF 164
D+L A H+ V+P G++LW D IP ++ K+ + +I F
Sbjct: 239 EARDMLEANPHLH--YVLPSEGSNLWFDNLVIPKT--VKNKKAA----------YAFINF 284
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
L+ A E I A+P+ L LP E+ K
Sbjct: 285 MLEPKNAAQ-NAEYIGYATPNKAAQKL--LPKEITSDK 319
>gi|398953666|ref|ZP_10675497.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398153641|gb|EJM42138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AIPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 185
Query: 74 ------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+ ++ N+A S+ ++ G++ VAVG+S DV
Sbjct: 186 ALHYLGYPVNDQDKQHIAQAEALFMKIRPNVAYF--HSSKYISDLANGNICVAVGYSGDV 243
Query: 110 LPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW 161
L A +PK GA+ + D+ AIP A+ +E + +I
Sbjct: 244 LQAKARAQEAGDRVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADI 303
Query: 162 ---IEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
I + A A P E I PG+ PS A+ +TL +P +
Sbjct: 304 TNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WG+ IA + + + + DLW+PE+ R+ + N PREV
Sbjct: 114 FDPDNTF-SVPYMWGSTAIAVNTGTLGE---SAVTSYADLWKPEMKDRLLLPNDPREVFA 169
Query: 73 SIAVQLNLALLANQSAHHLKAF----GI------------------GDVWVAVGWSSDVL 110
L +L AH +A+ G+ G+V V V W+ +
Sbjct: 170 IALKSLGYSLNDTDPAHLKQAYEKLKGLMPYVRVFDSDSPKQALLSGEVAVGVIWNGEAY 229
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
A + + V PK G SLW D IP ++
Sbjct: 230 VANQENPEIKYVYPKEGFSLWMDSLCIPKGAK 261
>gi|387760794|ref|YP_006067771.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius 57.I]
gi|339291561|gb|AEJ52908.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius 57.I]
Length = 355
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW P+ +I +V+ REV+G
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNSKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + + GD + V +S +
Sbjct: 180 FSLNSLGYSLNTKSMTELRLAETKLNSLTPNIKAIVGDEMKGYMVQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLE 143
+ ++ VVP G++LW D IP + E
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHE 273
>gi|107103124|ref|ZP_01367042.1| hypothetical protein PaerPA_01004193 [Pseudomonas aeruginosa PACS2]
Length = 354
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 62/262 (23%)
Query: 5 LRRNDAGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 57
L AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 159
Query: 58 AGRISMVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFG 95
GR+++++ P+E+ G+ L AL+ A S+ ++K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIG 148
+G++WVA G+SSD+ A +P+ GA L D I S+
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------- 272
Query: 149 GRVRGLSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDT 207
+P L +++I+F L A ++ G +P+A + KP + T
Sbjct: 273 ------NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT 316
Query: 208 NLIAGVPPAEILARFEFLEPLS 229
L A P A AR E L+ L+
Sbjct: 317 -LAALFPDATTQARLEPLKDLN 337
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K + + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNAHSVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIA----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGW 105
EV ++ +Q+ + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAVLNYMGMDPRSENPEDFKKAEAKLLQIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAVKHMS------NVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A N+A +PK GA+LW DL AIPA + + L P +
Sbjct: 237 SGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPADASNPKEAHAFINYLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P A+ ++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSASVGYANPNP--------AAKQYMDPELVSNP-EVYPPQEVLDKLYISTTPPQSI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|348026833|ref|YP_004766638.1| spermidine/putrescine-binding periplasmic protein PotD [Megasphaera
elsdenii DSM 20460]
gi|341822887|emb|CCC73811.1| spermidine/putrescine-binding periplasmic protein PotD [Megasphaera
elsdenii DSM 20460]
Length = 354
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 28/148 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G A PY WGTV I Y ++ + P++ W LW+ + I M +SPR+
Sbjct: 125 FDP-GNRYAVPYCWGTVGIVYNRTMVDE----PVDSWSILWKEKYKNDIIMQDSPRDSFM 179
Query: 73 SIAVQLNLALLAN-----QSAHHL--------KAFGIGDVW---------VAVGWSSDVL 110
+L +L Q A + +A+GI DV + V +S + L
Sbjct: 180 VALKRLGYSLNTTDPQQIQEAREMLIAQKPLVQAYGIDDVKDKLVSGEAAMGVVFSGEAL 239
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIP 137
+ ++ V+PK G +LW D W IP
Sbjct: 240 RMILENRDLEYVIPKEGTNLWIDSWVIP 267
>gi|325848745|ref|ZP_08170255.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480389|gb|EGC83451.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 345
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 41/158 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY WG+ I Y K++K + + WK+LW P+ G I + RE +G
Sbjct: 113 DPNNQ-YSIPYFWGSFGIIYNNKKYKKEDFSS---WKNLWDPKFEGEILSFDGARETLG- 167
Query: 74 IAVQLNLALLAN-------------QSAHHLKAF----------------GIGDVWVAVG 104
+ LLAN Q+ L F G+ V +
Sbjct: 168 ------IGLLANGRSLNETDEKVLRQTKDELVGFMKNVKAILADEIRMYMAQGEADVGIT 221
Query: 105 WSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+S + A N++ +PK G+++W D IP S+
Sbjct: 222 FSGEASMAESINKNLSYTIPKEGSNIWFDTMVIPKTSK 259
>gi|242242407|ref|ZP_04796852.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|420175104|ref|ZP_14681549.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|420192847|ref|ZP_14698704.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
gi|242234114|gb|EES36426.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|394244390|gb|EJD89735.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|394260663|gb|EJE05472.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
Length = 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ +L I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQLKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ + V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP E+ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKEV--------RNDHRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
++LSD +
Sbjct: 340 SSLSDYN 346
>gi|228477141|ref|ZP_04061779.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius SK126]
gi|340399386|ref|YP_004728411.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius CCHSS3]
gi|418018366|ref|ZP_12657922.1| spermidine/putrescine-binding protein PotD [Streptococcus
salivarius M18]
gi|228251160|gb|EEK10331.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
salivarius SK126]
gi|338743379|emb|CCB93887.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius CCHSS3]
gi|345527215|gb|EGX30526.1| spermidine/putrescine-binding protein PotD [Streptococcus
salivarius M18]
Length = 355
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW P+ +I +V+ REV+G
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + + GD + V +S +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMVQGDAAIGVTFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLE 143
+ ++ VVP G++LW D IP + E
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHE 273
>gi|357239072|ref|ZP_09126408.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
gi|356752794|gb|EHI69919.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
Length = 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + PY WGTV I Y K AP+ W+DLWRPE +I +++ RE++G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDKLVDK---APLH-WEDLWRPEYKNQIMLIDGAREMLG 181
Query: 73 SIAVQL-------NL-----------ALLANQS---AHHLKAFGIG-DVWVAVGWS---S 107
L NL AL N A +K + I D + + +S S
Sbjct: 182 VGLTTLGHSVNSKNLDHLQAAEKKLQALTPNVKAIVADEMKGYMIQEDAAIGITFSGEAS 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLE 143
+++ + +H+ VVP G++LW D +P + E
Sbjct: 242 EMIDSNEHLH--YVVPSEGSNLWFDNLVLPKTMKHE 275
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 40/200 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L+ PE + ++ ++S
Sbjct: 117 DP-GNRHSVPYLWGTNGIGYNVDKVKQVLGVDHIDSWATLYEPENLKKLQQCGVAFMDSA 175
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+I SI L L ++ +A + KA GD+ VA G+
Sbjct: 176 DELIPSILNYLGLDPNSSNAADYAKAEKRLLELRPYVTYFHSSKYISDLANGDICVAFGF 235
Query: 106 SSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL- 157
S DVL A +PK G++LW DL AIPA ++ + + + P
Sbjct: 236 SGDVLQAANRAREAGNGVKIAYSIPKEGSNLWFDLIAIPADAKNPDQALAFMNYVMEPKV 295
Query: 158 ---IHQWIEFCLQTARALPF 174
I ++ + A + PF
Sbjct: 296 IAGISDYVGYPNANADSRPF 315
>gi|398917403|ref|ZP_10658140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398172997|gb|EJM60845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + K R+ AP W L++PE A + IS ++SP E++ +
Sbjct: 126 AIPYMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPT 185
Query: 74 ------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+ ++ N+A S+ ++ G++ VAVG+S DV
Sbjct: 186 ALHYLGYPVNDQDKQHIAEAEALFMKIRPNVAYF--HSSKYISDLANGNICVAVGYSGDV 243
Query: 110 LPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVR---GLSPLI 158
L A +PK GA+ + D+ AIP A+ +E + + I
Sbjct: 244 LQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADI 303
Query: 159 HQWIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
I + A A P E I PG+ PS A+ +TL +P +
Sbjct: 304 TNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|309803912|ref|ZP_07697996.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 11V1-d]
gi|309804517|ref|ZP_07698583.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 09V1-c]
gi|309809178|ref|ZP_07703050.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners SPIN 2503V10-D]
gi|312875270|ref|ZP_07735279.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2053A-b]
gi|315653315|ref|ZP_07906237.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners ATCC
55195]
gi|325911831|ref|ZP_08174235.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 143-D]
gi|308164007|gb|EFO66270.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 11V1-d]
gi|308166170|gb|EFO68387.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 09V1-c]
gi|308170478|gb|EFO72499.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners SPIN 2503V10-D]
gi|311089233|gb|EFQ47668.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2053A-b]
gi|315489240|gb|EFU78880.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners ATCC
55195]
gi|325476337|gb|EGC79499.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 143-D]
Length = 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 54/235 (22%)
Query: 2 RVYLRR-NDAGEIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDL 52
++ LR+ ++ IDP+ G + PY WGT+ I Y KF K + I+ W DL
Sbjct: 105 KINLRKISNIKNIDPQFMNQSFDYGNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDL 161
Query: 53 WRPELAGRISMVNSPREVIGSIAVQLNLALLANQS---------------------AHHL 91
W+ + +I +V+S R+++G + + ++ + S A L
Sbjct: 162 WKSKFKHQILLVDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIADEL 221
Query: 92 KAFGI-GDVWVAVGWSSD---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQI 147
K + I + + V WS + +L H+ VVP G++LW D IP ++ Q
Sbjct: 222 KMYMIRNEASIGVTWSGEARTMLNENPHLH--YVVPSEGSNLWLDNIVIPKTAK---NQA 276
Query: 148 GGRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
G + +I F L A + I A+P+ L L LP + K +
Sbjct: 277 GA---------YAFINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 319
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLIPKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398927515|ref|ZP_10662982.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398169659|gb|EJM57635.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + K R+ AP W L++PE A + IS ++SP E++ +
Sbjct: 126 AIPYMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPT 185
Query: 74 ------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+ ++ N+A S+ ++ G++ VAVG+S DV
Sbjct: 186 ALHYLGYPVNDQDKQHIAEAEALFMKIRPNVAYF--HSSKYISDLANGNICVAVGYSGDV 243
Query: 110 LPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVR---GLSPLI 158
L A +PK GA+ + D+ AIP A+ +E + + I
Sbjct: 244 LQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADI 303
Query: 159 HQWIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
I + A A P E I PG+ PS A+ +TL +P +
Sbjct: 304 TNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVDKVKAALGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L + S+ ++ GD+ VA+
Sbjct: 182 PSEIFATVLNYLGKDPNSSDAKDYTGPATDLLLKLRPSVRYFHSSQYINDLANGDICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV+ A K+ NVA +PK GA + D++A+PA ++
Sbjct: 242 GWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|398798502|ref|ZP_10557801.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
gi|398100409|gb|EJL90648.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
Length = 369
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPE----LAG-RISMVNS 66
DP G A PY WGT I Y K + P++ W + +PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
GWS D+L A +VPK GA + D++AIP + K + G + L+
Sbjct: 242 GWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPK----DAKNVEGAYKFLNY 297
Query: 157 LI 158
++
Sbjct: 298 MM 299
>gi|218890165|ref|YP_002439029.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
gi|218770388|emb|CAW26153.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
Length = 354
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 62/262 (23%)
Query: 5 LRRNDAGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 57
L AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 159
Query: 58 AGRISMVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFG 95
GR+++++ P+E+ G+ L AL+ A S+ ++K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 96 IGDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIG 148
+G++WVA G+SSD+ A +P+ GA L D I S+
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------- 272
Query: 149 GRVRGLSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDT 207
+P L +++I+F L A ++ G +P+A + KP + T
Sbjct: 273 ------NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT 316
Query: 208 NLIAGVPPAEILARFEFLEPLS 229
L A P A AR E L+ L+
Sbjct: 317 -LAALFPDATTQARLEPLKDLN 337
>gi|417711617|ref|ZP_12360616.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
Length = 370
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S ++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFQDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 63/232 (27%)
Query: 11 GEIDP----------RGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELA 58
G +DP +G + PY WGT + Y + + + AP++ W L+ PE+
Sbjct: 106 GNLDPDLMSNLEAIDQGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPLDSWALLFDPEIT 165
Query: 59 GRIS-------MVNSPREVIGSIAVQLNLALLANQ----------------------SAH 89
+++ M++S E++ L L+ L+ S+
Sbjct: 166 TQLNDAGCGLAMLDSGDEMLSPAMAYLGLSPLSENIEDLEAAGELIAAIRGNITYFHSSR 225
Query: 90 HLKAFGIGDVWVAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASR 141
++ GD+ VA G+S D+ A +PK GA+LW D+ AIPA A
Sbjct: 226 YVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAIPADAPN 285
Query: 142 LETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVK 193
E H +I F L+ A E + A+P+A + V
Sbjct: 286 TENA-------------HAFINFILEPEIAAEIS-EYVRYANPNAAANEFVS 323
>gi|404418332|ref|ZP_11000099.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus arlettae CVD059]
gi|403488925|gb|EJY94503.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus arlettae CVD059]
Length = 357
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY +GTV I Y + N W+ L+ P+ I +V+ RE+IG
Sbjct: 126 FDPKNQ-YSVPYFFGTVGIIYNTKAYPNDNFT---SWESLYNPKYEEDILLVDGAREIIG 181
Query: 73 SIAVQLNLALLANQSAHHLKAFG-------------IGD----------VWVAVGWSSDV 109
+L +L +++ HL+ +GD +AV WS
Sbjct: 182 LSLNKLGYSL-NDKNPQHLRQAEQDLTQLAPQIRGVVGDEVTMMLEQHEANIAVVWSGVA 240
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
P +++ + VVPK G++LW D AIP ++
Sbjct: 241 APIIQNNPDFNYVVPKEGSNLWFDNMAIPKTAQ 273
>gi|259047495|ref|ZP_05737896.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Granulicatella adiacens
ATCC 49175]
gi|259035686|gb|EEW36941.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Granulicatella adiacens
ATCC 49175]
Length = 356
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 36/157 (22%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y K+ + + I +W+DLW+ E I +
Sbjct: 116 IDPRFLHQSFDPDNTYSIPYFWGTLGIVYNKNVYPE---GTISEWRDLWKEEFKDSILFI 172
Query: 65 NSPREVIGSIAVQ-----LN--------------LALLANQSA---HHLKAFGIGD-VWV 101
+ RE++G IA+Q LN L+ N A +K + I + +
Sbjct: 173 DGAREMMG-IALQTQGYSLNEKDETIVKEAGKFLKTLMPNAKAIIADEMKTYMIQEEANI 231
Query: 102 AVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIP 137
AV +S + + N+A VVP G +LW D IP
Sbjct: 232 AVTFSGEASKMMSENENLAYVVPSEGTNLWFDNIVIP 268
>gi|392982666|ref|YP_006481253.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
gi|419754797|ref|ZP_14281155.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|384398615|gb|EIE45020.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|392318171|gb|AFM63551.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
Length = 353
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPSWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDATTQARLEPLKDLN 336
>gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758]
gi|225207031|gb|EEG89385.1| ABC transporter, solute-binding protein [Coprococcus comes ATCC
27758]
Length = 627
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 61
+ Y+ ++ A DP K + PY WGTV I Y K+ + PI+ W LW P+ I
Sbjct: 389 QTYMDQSKA--FDPENK-YSVPYCWGTVGILYNKTMVDE----PIDSWSVLWDPKYKDSI 441
Query: 62 SMVNSPREVIGSIAVQLNLALLA------NQSAHHL-------KAFGIGDV--------- 99
M +S R+ G L +L + N++ + L +A+ + V
Sbjct: 442 LMQDSVRDAFGVTLKYLGYSLNSTDLDELNEAKNLLIKQKPLVQAYVVDQVRDKMIGNEA 501
Query: 100 WVAVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIP 137
+ V +S + + K N+ V+PK G+++W D W IP
Sbjct: 502 AIGVIYSGEAIYTQKENPNLEYVIPKEGSNIWIDSWVIP 540
>gi|420138192|ref|ZP_14646132.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
gi|403249045|gb|EJY62561.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
Length = 354
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDATTQARLEPLKDLN 337
>gi|381352990|pdb|3TTN|A Chain A, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
gi|381352991|pdb|3TTN|B Chain B, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
Length = 340
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 95/243 (39%), Gaps = 44/243 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E+ G A PY WGT I Y +K ++ PI+ W L+ PE + ++ +
Sbjct: 96 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENXKKLAKCGVAFXD 155
Query: 66 SPREVIGSIAVQLNLALLAN----------------------QSAHHLKAFGIGDVWVAV 103
S E + + L L + S+ ++ G++ VA
Sbjct: 156 SGDEXLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 215
Query: 104 GWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
G+S DV A K + V+PK GA+LW DL AIPA ++ L P
Sbjct: 216 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLXAIPADAKAADNAYAFIDYLLRP 275
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+ + + A A IPGA P L V E+ + LD ++ V PA
Sbjct: 276 EVIAKVSDYVGYANA-------IPGARP--LXDKSVSDSEEVYPPQAVLDKLYVSAVLPA 326
Query: 217 EIL 219
++L
Sbjct: 327 KVL 329
>gi|424939578|ref|ZP_18355341.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
gi|346056024|dbj|GAA15907.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
Length = 353
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDATTQARLEPLKDLN 336
>gi|223043832|ref|ZP_03613874.1| spermidine/putrescine-binding periplasmic protein (spbp)
[Staphylococcus capitis SK14]
gi|417907517|ref|ZP_12551288.1| putative spermidine/putrescine ABC transporter [Staphylococcus
capitis VCU116]
gi|222442736|gb|EEE48839.1| spermidine/putrescine-binding periplasmic protein (spbp)
[Staphylococcus capitis SK14]
gi|341595546|gb|EGS38189.1| putative spermidine/putrescine ABC transporter [Staphylococcus
capitis VCU116]
Length = 357
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP K + PY +GTV I Y K K+ N W +L++ + I +V+ RE++G
Sbjct: 127 DPHNK-YSLPYFFGTVGILYNKDKYPHDNF---NSWSELYQSKYKNDILLVDGAREMMGM 182
Query: 74 IAVQLNLALLANQSAH------HLKAF------GIGDVW----------VAVGWSSDVLP 111
+L +L N S+H LK +GD +AV WS P
Sbjct: 183 GLNKLGYSLNDNHSSHIQRAEVDLKKLVPQVRGVVGDEITMMLQQHEGNIAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQGSNKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 60/238 (25%)
Query: 21 AAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI 74
AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S E+I ++
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 75 AVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVLPA 112
L L + +A + KA G++ VA G+S DV A
Sbjct: 183 LNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQA 242
Query: 113 V-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEF 164
K + +PK GA+LW D+ AIPA AS +E H +I +
Sbjct: 243 AARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVEEA-------------HAFINY 289
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
L + EVI S + GEL+ + D ++ PP E+L R
Sbjct: 290 LL--------RPEVIAAVSDYVGYANPNLKAGELMDQEVRGDASV---YPPQEVLDRL 336
>gi|385330681|ref|YP_005884632.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
gi|311693831|gb|ADP96704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
Length = 368
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 60
+D ++DP G A PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLATGG 173
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGI 96
I+M++S E++ + + L +N S+ ++
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAIRPNITYFHSSRYIGDLAN 233
Query: 97 GDVWVAVGWSSDVLPAVKHM-----SNV--AVVPKSGASLWADLWAIPAAS 140
GD+ VA G+S D+L A NV +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K +K P++ W + +PE + +S +++
Sbjct: 124 DPDNK-YALPYLWATTGIGYNVDKVKKALGTDVPLDSWDMVLKPENLAKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|421158598|ref|ZP_15617845.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
gi|404549479|gb|EKA58338.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
Length = 354
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDATTQARLEPLKDLN 337
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 67
G + PY WGT I Y + ++ + AP++ W L+ PE+ +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITAALSEAGCGLSMLDSG 181
Query: 68 REVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWVAVGW 105
E++ L L L+ S+ ++ GD+ V+ G+
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDLEAGGELIAGVRDNMTYFHSSRYVSDLANGDICVSAGY 241
Query: 106 SSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA 138
S D+ A + S +PK GA+LW D+ A+PA
Sbjct: 242 SGDIFQAAERAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli]
Length = 370
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L + N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLNVRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|403046955|ref|ZP_10902424.1| spermidine putrescine-binding periplasmic protein [Staphylococcus
sp. OJ82]
gi|402763651|gb|EJX17744.1| spermidine putrescine-binding periplasmic protein [Staphylococcus
sp. OJ82]
Length = 298
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY +GTV I Y K+ + N E W L++ + I +V+ RE+IG +L
Sbjct: 74 SIPYFFGTVGILYNKNVYPNDNF---ESWDQLYKVKYKNDILLVDGAREIIGVALNKLGY 130
Query: 81 ALLANQSAH------HLKAFG------IGD----------VWVAVGWSSDVLPAVKHMSN 118
+L S++ +L G +GD VAV WS P V+
Sbjct: 131 SLNETHSSYLAEAERNLTHLGPNVKGVVGDEISMMLEQHEANVAVVWSGVAAPIVQQNEE 190
Query: 119 V-AVVPKSGASLWADLWAIPAASR 141
VVPK G++LW D IP ++
Sbjct: 191 FDYVVPKEGSNLWFDNMVIPKTTQ 214
>gi|15598806|ref|NP_252300.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO1]
gi|254236526|ref|ZP_04929849.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|254242308|ref|ZP_04935630.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|418586155|ref|ZP_13150201.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|418589417|ref|ZP_13153339.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|421152581|ref|ZP_15612161.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|421179226|ref|ZP_15636822.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
gi|9949767|gb|AAG06998.1|AE004781_6 polyamine transport protein PotD [Pseudomonas aeruginosa PAO1]
gi|126168457|gb|EAZ53968.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|126195686|gb|EAZ59749.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|375043829|gb|EHS36445.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|375051651|gb|EHS44117.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|404525341|gb|EKA35617.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|404547469|gb|EKA56467.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
Length = 354
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDATTQARLEPLKDLN 337
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 36/160 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W L P + +SM++SP
Sbjct: 118 DP-GNQYSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLLEPANLKKLQQCGVSMMDSP 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV ++ L L + S+ ++ GD+ +A G+
Sbjct: 177 DEVFPAVLNYLGLDPRSENPEDYKKAEAKLLTLRPYITYFHSSKYVSDLANGDICIAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPA 138
S DV A K+ N+A +PK G++LW DL AIPA
Sbjct: 237 SGDVFQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|171777632|ref|ZP_02919297.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705393|ref|YP_005203852.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding
protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171283160|gb|EDT48584.1| ABC transporter, solute-binding protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|374682092|gb|AEZ62381.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding
protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 357
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----IGSIA 75
+ PY WGT+ I Y + K AP E W DLW+ E I +V+ RE +G++
Sbjct: 133 YSVPYFWGTLGIVYNDTMVDK---AP-EHWSDLWKQEYKNDIMLVDGAREAMGIGLGTLG 188
Query: 76 VQLNLALLANQSA-----------------HHLKAFGIGD---VWVAV-GWSSDVLPAVK 114
LN + +A +K + I D + V G +S++L +
Sbjct: 189 YSLNTKSMTELNAASKKLDDLTPNIKAIVGDEMKGYMINDNAAIGVTFSGEASEMLNSND 248
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPF 174
H+ VVP G++LW D IP ++ K+ + +I F LQ A
Sbjct: 249 HLH--YVVPSEGSNLWFDNLVIPKTAK-HIKE-----------AYAFINFMLQPENAAQ- 293
Query: 175 KQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
E I A+P+ L LP ++ + K A P E E L +
Sbjct: 294 NAEYIGYATPNTEAKKL--LPNDIKENK--------AFYPSEETFNHLEVYNNLGQ 339
>gi|420369175|ref|ZP_14869900.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
gi|391321501|gb|EIQ78224.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
Length = 370
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 121 GKHDPDNKF-AMPYMWATTGIGYNVDKVKAVLGADAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P EV ++ A L L L N S+ ++ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VA+GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|416854709|ref|ZP_11911066.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|421518153|ref|ZP_15964827.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451987812|ref|ZP_21935964.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|334843692|gb|EGM22277.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|404347635|gb|EJZ73984.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451754571|emb|CCQ88487.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|453047383|gb|EME95097.1| polyamine transporter PotD [Pseudomonas aeruginosa PA21_ST175]
Length = 353
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDATTQARLEPLKDLN 336
>gi|406027797|ref|YP_006726629.1| spermidine/putrescine-binding periplasmic protein, precursor
[Lactobacillus buchneri CD034]
gi|405126286|gb|AFS01047.1| spermidine/putrescine-binding periplasmic protein, precursor
[Lactobacillus buchneri CD034]
Length = 356
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DPR K + PY WGT+ I Y + +E W LW + I +++S R+++G
Sbjct: 126 FDPRNK-YSIPYFWGTLGIIYNDQYVKP---GSLEHWNQLWSKKYRNDIMLIDSARDILG 181
Query: 73 SIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVL 110
+ + ++ SA +KA G+ +AV WS +
Sbjct: 182 FSLISMGQSVNTTNSAELIKAKDKLNRLSPNVKAVVADEIKMYMAEGEAPIAVDWSGEAS 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ S++ VVP G+++W D IP ++
Sbjct: 242 EMMSQNSHLHYVVPTEGSNMWFDNLVIPKTAK 273
>gi|392971724|ref|ZP_10337117.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Staphylococcus equorum subsp. equorum Mu2]
gi|392510263|emb|CCI60405.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Staphylococcus equorum subsp. equorum Mu2]
Length = 357
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY +GTV I Y K+ + N E W L++ + I +V+ RE+IG +L
Sbjct: 132 YSIPYFFGTVGILYNKNVYPNDNF---ESWDQLYKVKYKNDILLVDGAREIIGVALNKLG 188
Query: 80 LALLANQSAH------HLKAFG------IGD----------VWVAVGWSSDVLPAVKHMS 117
+L S++ +L G +GD VAV WS P V+
Sbjct: 189 YSLNETHSSYLAEAERNLTHLGPNVKGVVGDEISMMLEQHEANVAVVWSGVAAPIVQQNE 248
Query: 118 NV-AVVPKSGASLWADLWAIPAASR 141
VVPK G++LW D IP ++
Sbjct: 249 EFDYVVPKEGSNLWFDNMVIPKTTQ 273
>gi|358451127|ref|ZP_09161561.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224360|gb|EHJ02891.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 368
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 60
+D ++DP G A PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGI 96
I+M++S E++ + + L +N S+ ++
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIRKGGEVIKAIRPNITYFHSSRYIADLAN 233
Query: 97 GDVWVAVGWSSDVLPAVKHM-----SNV--AVVPKSGASLWADLWAIPAAS 140
GD+ VA G+S D+L A NV +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|386057442|ref|YP_005973964.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
gi|347303748|gb|AEO73862.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
Length = 353
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A + +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAESAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDATTQARLEPLKDLN 336
>gi|398350258|ref|YP_006395722.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
gi|390125584|gb|AFL48965.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
Length = 364
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 61/254 (24%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIE--DWKDLWRPELAGR-----ISM 63
+ DP G A Y WGT I Y K K L E +W ++ PE+A + I +
Sbjct: 117 AQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGSDEKPNWDVVFNPEIAAKFKDCGIHL 174
Query: 64 VNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWV 101
++SP ++I S L L +++ S+ ++ A GD+ +
Sbjct: 175 LDSPTDIIPSALAYLGLNPDSHEQADLDKAAELLLKVRPYIRKFHSSEYINALANGDICL 234
Query: 102 AVGWSSDVLP----AVKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGL 154
AVG+S D+ A + S V V +P GA +W D+ AIPA + +
Sbjct: 235 AVGFSGDIFQARDRAAEAKSGVTVDYSIPAQGAQMWFDMLAIPADAPHVAEA-------- 286
Query: 155 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVP 214
H++I + + K EVI AS + K + L + DT A P
Sbjct: 287 ----HEFINYMM--------KPEVIAKASNYVFYANGNKASQQFLDKEVLEDT---AIYP 331
Query: 215 PAEILARFEFLEPL 228
P ++ + + P
Sbjct: 332 PEAVMQKLFTVTPF 345
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D++ A K+ NVA +PK GA + D++A+P ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|313108968|ref|ZP_07794943.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|386067645|ref|YP_005982949.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
gi|310881445|gb|EFQ40039.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|348036204|dbj|BAK91564.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
Length = 353
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + KP + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------KPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDATTQARLEPLKDLN 336
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP+ + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DPQNA-HSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVLFEPENIKKLSQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
EV ++ + + LLA S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAMLNYMGMDPRSENPEDFKKAEAKLLAIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ N+A +PK G++LW DL A+PA + + L P +
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAVPADASNPKEAHAFINNLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P +E +++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSATVGYANPNPAAKEF--------MDAELVNNP-EVYPPQAVLDKLYISTTPPQAI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4]
gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-4]
gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp.
ANA-3]
Length = 387
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 62/246 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y K + AP + + ++ P+ A +IS M++S
Sbjct: 142 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDS 200
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
+++ + L L LL S+ ++ GD+ VA G
Sbjct: 201 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 260
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSP 156
+S DV A +PK GA+LW D+ AIPA A+ +E
Sbjct: 261 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVENA----------- 309
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
H+ I + L+ P V A+P+ LV E ++ P++ PP
Sbjct: 310 --HKLINYLLRPEVIAPISNYV-AYANPNDPAQPLVD---EAIRNDPAI-------YPPK 356
Query: 217 EILARF 222
E+L +
Sbjct: 357 EVLDKL 362
>gi|116627662|ref|YP_820281.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386344482|ref|YP_006040646.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
gi|116100939|gb|ABJ66085.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|221047225|gb|ACL98064.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
gi|339277943|emb|CCC19691.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus JIM 8232]
Length = 356
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
+ + PY WGT+ I Y + P ++W+DLW E I +++ REV+G
Sbjct: 128 KNNDYSIPYFWGTLGIVYNDTMVEN----PPQEWEDLWSDEYRDNIMLIDGVREVMGFGL 183
Query: 73 -SIAVQLNLA--LLANQSAHHL---------------KAFGIGD-VWVAVGWS---SDVL 110
S+ LN + ++A HL K + I D +AV +S S++L
Sbjct: 184 QSLGYSLNSKNPVEIEEAAEHLYNLTPNIKAIVADEIKGYMIQDAAAIAVSFSGEASEML 243
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
+H+ VVP G++LW D IP +++
Sbjct: 244 DGNEHLH--YVVPSKGSNLWFDNMVIPKSAK 272
>gi|387784640|ref|YP_006070723.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius JIM8777]
gi|338745522|emb|CCB95888.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus salivarius JIM8777]
Length = 355
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + PY WGTV I Y +K AP + W DLW P+ +I +V+ REV+G
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNSKLVKK---AP-QHWDDLWSPDYKNQIMLVDGAREVLG 179
Query: 73 ----SIAVQLNL--------------ALLANQSA---HHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN +L N A +K + + GD + + +S +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMVQGDAAIGITFSGEAS 239
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLE 143
+ ++ VVP G++LW D IP + E
Sbjct: 240 EMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHE 273
>gi|400290239|ref|ZP_10792266.1| spermidine/putrescine-binding protein [Streptococcus ratti FA-1 =
DSM 20564]
gi|399921030|gb|EJN93847.1| spermidine/putrescine-binding protein [Streptococcus ratti FA-1 =
DSM 20564]
Length = 357
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 94/233 (40%), Gaps = 54/233 (23%)
Query: 23 PYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG----SIAVQL 78
PY WGTV I Y K P + W DLW + I +V+ REVIG S+ L
Sbjct: 136 PYFWGTVGIVYNSKMLNK---VP-KHWNDLWNKDYVNSIMLVDGAREVIGFGLNSLGYSL 191
Query: 79 NLALLA---------NQSAHHLKAF------GI---GDVWVAVGWS---SDVLPAVKHMS 117
N A NQ ++KA G GD + V +S S++L A K +
Sbjct: 192 NTKNAAELKKAENRLNQLTPNIKAIVGDEMKGYLIRGDAALGVTFSGEASEMLDANKDL- 250
Query: 118 NVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQE 177
+VP G++LW D IP + + + + +I F L+ A
Sbjct: 251 -CYIVPSEGSNLWFDNLVIPKTVKHKKEA------------YAFINFMLKPQNAAQ-NAS 296
Query: 178 VIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
I A+P+A L LP E+ K A P ++ ++R E + L +
Sbjct: 297 YIGYATPNAKAKEL--LPAEIKNNK--------AFYPDSKTVSRLEVYDNLGK 339
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 40/161 (24%)
Query: 21 AAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI 74
A Y WGT I Y K ++ P+ W +++PE+ + + ++ P EVI S
Sbjct: 125 AVNYMWGTTGIGYNVDKVKERLGDIPMNTWDIVFKPEILSKLKDCGVYFLDGPEEVIPSA 184
Query: 75 AVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
L L LL + S+ ++ A GD+ +AVGWS DV A
Sbjct: 185 MKYLGLDPNSKNPDDIAKAGELLMSVRPYIKKFDSSGYINALARGDICLAVGWSGDVFQA 244
Query: 113 VKHMS-----------NVA-VVPKSGASLWADLWAIPAASR 141
+ NVA V+PK GA +W D +AIP ++
Sbjct: 245 KTRAAEAAKKTKKPPVNVAYVIPKQGALMWFDNFAIPKDAK 285
>gi|372267549|ref|ZP_09503597.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Alteromonas sp. S89]
Length = 365
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 41/175 (23%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRI 61
+++R D + DP G A PY WGTV I Y K P + W L+ PE G++
Sbjct: 110 FMQRLD--QFDP-GNQYAFPYLWGTVGIGYNVQAVEKAFGGTLPEDSWDLLFAPEYLGKL 166
Query: 62 -----SMVNSPREVIG-------------SIAVQLNLALLANQSAHHLKAFGIGDVW--- 100
+++ SP E+ SIA Q +A L ++ H+ F G+
Sbjct: 167 HHCNATLMRSPEEIFDVALKYLEKDPNSMSIAHQYMVANLLSRVRLHINDFDSGEYVEEL 226
Query: 101 ------VAVGWSSDVLPAVKHMSNVA--------VVPKSGASLWADLWAIPAASR 141
+A WS DVL A + M+ A V+P+ G LW D+ +IP+ +R
Sbjct: 227 ASGERCIAHAWSGDVLVA-QQMAEEAGKDFEIRYVMPREGFPLWIDVLSIPSNAR 280
>gi|293366910|ref|ZP_06613585.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417659499|ref|ZP_12309101.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU045]
gi|417909087|ref|ZP_12552833.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU037]
gi|420222085|ref|ZP_14727009.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH08001]
gi|420224946|ref|ZP_14729783.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH06004]
gi|420229238|ref|ZP_14733945.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH04003]
gi|291318885|gb|EFE59256.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735524|gb|EGG71812.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU045]
gi|341654281|gb|EGS78029.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU037]
gi|394289704|gb|EJE33579.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH08001]
gi|394294086|gb|EJE37776.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH06004]
gi|394299506|gb|EJE43054.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH04003]
Length = 357
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W+DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWEDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLALLANQSAHHLKAFG------------IGDV----------WVAVGWSSDVLP 111
+L +L H +A +GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIYQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|398791267|ref|ZP_10552012.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
gi|398215321|gb|EJN01884.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
Length = 369
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPE----LAG-RISMVNS 66
DP G A PY WGT I Y K + P++ W + +PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
GWS D+L A +VPK GA + D++AIP ++
Sbjct: 242 GWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 38/169 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY + T I Y K + AP+ W + +PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAV 240
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASRLETK 145
GWS DV+ A K+ N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 241 GWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N+A +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNIAFSIPKEGAMAFFDVFAMPADAK 288
>gi|226946878|ref|YP_002801951.1| polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
gi|226721805|gb|ACO80976.1| Polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
Length = 371
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 44/215 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPE-----LAGRISMVNS 66
DP G A PY WGT+ I Y K + + AP++ W +++PE A +S ++S
Sbjct: 126 DP-GNQYAVPYMWGTIGIGYNVDKVKAALGDHAPVDSWDLVFKPENIEKLKACGVSFLDS 184
Query: 67 PREVIGSI------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVG 104
P E++ + A +L L + N S+ ++ GD VAVG
Sbjct: 185 PTEMLPAALHYLGFAPDSGNPEELKKAEELFLKIRPNVAYFHSSKYISDLANGDTCVAVG 244
Query: 105 WSSDVLP----AVKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
+S D+ A + +NV + +PK GA + D+ AIPA ++ + + P
Sbjct: 245 YSGDIYQSKARAEEVGNNVKIGYSIPKEGAGSFFDVLAIPADAKNVDQAHAFIDYLMKPQ 304
Query: 158 ----IHQWIEFCLQTARALPFKQEVI---PGASPS 185
I + F A A P E I PG PS
Sbjct: 305 VIAGITNEVRFPNGNAAATPLVDEAIRTDPGIYPS 339
>gi|416124466|ref|ZP_11595462.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|418634606|ref|ZP_13196999.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|420177479|ref|ZP_14683815.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|420180221|ref|ZP_14686476.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|420189697|ref|ZP_14695665.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|420204050|ref|ZP_14709610.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
gi|319401576|gb|EFV89786.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|374836829|gb|EHS00406.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|394247863|gb|EJD93105.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|394251260|gb|EJD96359.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|394261032|gb|EJE05834.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|394274064|gb|EJE18489.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
Length = 357
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ +L I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ + V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP E+ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKEV--------RNDHRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
++LSD +
Sbjct: 340 SSLSDYN 346
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 162 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 220
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 221 PSEIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 280
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D++ A K+ NVA +PK GA + D++A+P ++
Sbjct: 281 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 325
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 38/169 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY + T I Y K + AP+ W + +PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAV 240
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASRLETK 145
GWS DV+ A K+ N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 241 GWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|424923175|ref|ZP_18346536.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304335|gb|EJZ58297.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 363
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 37/160 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGTV I Y + K R P++ W ++ P+ + ++ +++
Sbjct: 118 DP-GNQYAVPYMWGTVGIGYNEEKVRAVLGKDVPLDSWSMVFDPQNLAKLKNCGVAFLDA 176
Query: 67 PREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVG 104
P ++I + L L ++ S+ + GD+ VA+G
Sbjct: 177 PVKIIPQALLYLGLDPNSVKPDDYKQASKLLMTLRPSVTYFNSSKYTSDLANGDICVAIG 236
Query: 105 WSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIP 137
+S DV+ A K++ ++PK G +LW D+ AIP
Sbjct: 237 YSGDVMQAQTRAREAGKNIDIRYLIPKEGVNLWFDMLAIP 276
>gi|205372303|ref|ZP_03225117.1| extracellular solute-binding protein [Bacillus coahuilensis m4-4]
Length = 356
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 42/179 (23%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y + W DLW P L I +V+ REV+G
Sbjct: 126 FDPENQ-YSIPYFWGTVGIVYNPTMVE----GEFTSWDDLWDPSLKNEILLVDGAREVMG 180
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L H ++KA +GD VAV WS +
Sbjct: 181 FALNSLGYSLNDTNHTHLIEAKEKLDTLTPNIKAI-VGDEIKILMANEEASVAVVWSGEA 239
Query: 110 LPAVKHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
+ ++ +P+ G++LW D IP ++ V G HQ++ F L
Sbjct: 240 ADMMWENEDLTYAIPEEGSNLWFDNMVIPKTAQ--------NVEG----AHQFMNFMLD 286
>gi|326204713|ref|ZP_08194568.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
gi|325985084|gb|EGD45925.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
Length = 349
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y K+ ++ P+ W LW + +I M++S R+ I
Sbjct: 122 FDPKNE-YSVPYMWGTVGIIYNKTMVKE----PVNSWNILWDKKYDKQIFMLDSQRDSIA 176
Query: 73 SIAVQLNLALLANQSAHHLKAFG----------------------IGDVWVAVGWSSDVL 110
+L +L A KA +G+ +AV WS D +
Sbjct: 177 VALKKLGYSLNTKNKAELEKAKNELIKQKDIVQAYVGDEVKDKMIMGEGALAVVWSGDAV 236
Query: 111 PAVKHMSNVAV-VPKSGASLWADLWAIPAASR 141
++ +PK G++LW D IP+ ++
Sbjct: 237 YMKNQNKDLEYAIPKEGSNLWFDSMVIPSTAK 268
>gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7]
gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-7]
Length = 387
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 62/246 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y K + AP + + ++ P+ A +IS M++S
Sbjct: 142 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDS 200
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
+++ + L L LL S+ ++ GD+ VA G
Sbjct: 201 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 260
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSP 156
+S DV A +PK GA+LW D+ AIPA A+ +E
Sbjct: 261 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVENA----------- 309
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
H+ I + L+ P V A+P+ LV E ++ P++ PP
Sbjct: 310 --HKLINYLLRPEVIAPISNYV-AYANPNDPAQPLVD---EAIRNDPAI-------YPPK 356
Query: 217 EILARF 222
E+L +
Sbjct: 357 EVLDKL 362
>gi|418328747|ref|ZP_12939849.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365231674|gb|EHM72701.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 357
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ +L I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ + V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP E+ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKEV--------RNDHRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
++LSD +
Sbjct: 340 SSLSDYN 346
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 36/154 (23%)
Query: 24 YRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSIAV 76
Y WGT + Y K + AP++ W L++PE A + I ++++P E+ +
Sbjct: 123 YMWGTTGLGYNVEKVKAALGEDAPVDSWDLLFKPENAAKLQECGIHVLDAPTELFPAALN 182
Query: 77 QLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVGWSSDVLP--- 111
L L LL + S+ ++ A GD+ +AVGWS DVL
Sbjct: 183 YLGLDPDSKDTGDIEKATELLKSVRPYVQKFHSSEYINALANGDICLAVGWSGDVLQARD 242
Query: 112 -AVKHMSNVAV---VPKSGASLWADLWAIPAASR 141
A + + V V +PK GA +W D AIPA ++
Sbjct: 243 RAAEADNGVTVEYAIPKEGALMWFDQMAIPADAK 276
>gi|167033710|ref|YP_001668941.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166860198|gb|ABY98605.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 362
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ +I L + + + + KA GDV VA G+
Sbjct: 177 DELFPAILNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSTTVGYANANP--------DANAYMDASLVNNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|259502359|ref|ZP_05745261.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus antri DSM
16041]
gi|259169739|gb|EEW54234.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus antri DSM
16041]
Length = 357
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 51/242 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
RG + PY WGT+ I Y K R + ++ W LW P L + +++S R+V
Sbjct: 128 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 184
Query: 73 -SIAVQLNLALLA--NQSAHHLKAFG------IGD----------VWVAVGWSSDV--LP 111
S +N A Q+ HLK + D V V +S D +
Sbjct: 185 ISQGQSVNTTSYAKLKQAQDHLKTLTPNVKAIVADEMKMYMEQDEAAVGVTYSGDAREMM 244
Query: 112 AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+V H + VVP G+++W D IP R + +I F L+ A A
Sbjct: 245 SVNHHLHY-VVPSEGSNIWFDNMVIP------------RAAKNKAAAYAFINFMLEPANA 291
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
E + A+P+A + +LP + + A PPA+ + + L
Sbjct: 292 AQ-NAEYVGYATPNA--AARRRLPKRITADQ--------AFYPPAKTMRHLQVYRDLPLK 340
Query: 232 TL 233
TL
Sbjct: 341 TL 342
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 52/192 (27%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L + S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDPKDYSGAATDLLLKLRPSIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLS 155
GWS D+L A K+ N+A VPK GA + D+ AIP A L+
Sbjct: 242 GWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDMMAIPKDAKNLDEA---------- 291
Query: 156 PLIHQWIEFCLQ 167
+QW+ F +
Sbjct: 292 ---YQWLNFIMD 300
>gi|379724354|ref|YP_005316485.1| family 1 extracellular solute-binding protein [Paenibacillus
mucilaginosus 3016]
gi|378573026|gb|AFC33336.1| family 1 extracellular solute-binding protein [Paenibacillus
mucilaginosus 3016]
Length = 358
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 51/246 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGTV I + + W DLW +L +I +V+ REV+G
Sbjct: 126 FDP-GNKYSVPYFWGTVGIIFNPDLLEEG--KTFTSWNDLWDEKLENQILLVDGAREVMG 182
Query: 73 SIAVQLNLALLANQSAH-------------HLKAFGIGD----------VWVAVGWSSDV 109
L +L AH ++KA +GD V V WS D
Sbjct: 183 MGLNSLGYSLNDRDEAHLQEAKAKLDTLTPNVKAI-VGDEIKMLLANEEAAVGVVWSGDA 241
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + VVP+ G++LW D IP + + G H +I F L
Sbjct: 242 SEIMDENDKLDYVVPEEGSNLWFDNMVIPKTAH--------NIEG----AHAFINFMLDP 289
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A E + ++P+ ES + LP E+ K P E+ + E E L
Sbjct: 290 EVAAQ-NAEYVGYSTPN--ESAMEFLPEEISGDK--------RFYPDPELTEKLEVYENL 338
Query: 229 SEATLS 234
+ LS
Sbjct: 339 GKRMLS 344
>gi|359781089|ref|ZP_09284314.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359371149|gb|EHK71715.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 366
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMV 64
E++ G PY +GT++I + +K + AP++ W +++PE + ++M+
Sbjct: 118 EVNDPGNQYGVPYMYGTILIGFNPAKVKAALGADAPVDSWDLVFKPENMAKLKSCGVAML 177
Query: 65 NSPREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVA 102
+SP +++ + L L AL+ S ++ GD+ VA
Sbjct: 178 DSPSDILPVVLHYLGLDPNSANAKDYEKATALMLKIRPYMAYFNSTKYMTDIANGDICVA 237
Query: 103 VGWSSDVLPA---VKHMSNVAVV----PKSGASLWADLWAIPAAS 140
VG+S K N VV P+ GA +W D WAIPA++
Sbjct: 238 VGYSGSFYQFGNRAKEAGNGVVVDWRLPREGAPIWFDTWAIPASA 282
>gi|323694111|ref|ZP_08108290.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
gi|323501828|gb|EGB17711.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
Length = 645
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 45/204 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP + + PY WGTV I Y + L + W DLW P G I M +S R+
Sbjct: 406 EFDPEN-LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAF 464
Query: 72 GSIAVQLNLALLANQSAHHL--------------KAFGI---------GDVWVAVGWSSD 108
+A++ + ++ + L +A+ I G+ + V +S +
Sbjct: 465 -MVALKARGYSMNTENINELQEAKADLIAQKPLVQAYVIDQVRDKMIGGEAALGVIFSGE 523
Query: 109 VLPAVKHMSNV-------AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
+L + + N V+P+ G +LW D W IPA ++ + +W
Sbjct: 524 MLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA------------EKW 571
Query: 162 IEFCLQTARALPFKQEVIPGASPS 185
I F + AL E I A+P+
Sbjct: 572 INFLCRPDIALK-NFEYITYATPN 594
>gi|323485348|ref|ZP_08090697.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|355625500|ref|ZP_09048281.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
gi|323401384|gb|EGA93733.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|354821324|gb|EHF05714.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
Length = 645
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 45/204 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP + + PY WGTV I Y + L + W DLW P G I M +S R+
Sbjct: 406 EFDPEN-LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAF 464
Query: 72 GSIAVQLNLALLANQSAHHL--------------KAFGI---------GDVWVAVGWSSD 108
+A++ + ++ + L +A+ I G+ + V +S +
Sbjct: 465 -MVALKARGYSMNTENINELQEAKADLIAQKPLVQAYVIDQVRDKMIGGEAALGVIFSGE 523
Query: 109 VLPAVKHMSNV-------AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQW 161
+L + + N V+P+ G +LW D W IPA ++ + +W
Sbjct: 524 MLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA------------EKW 571
Query: 162 IEFCLQTARALPFKQEVIPGASPS 185
I F + AL E I A+P+
Sbjct: 572 INFLCRPDIALK-NFEYITYATPN 594
>gi|237730837|ref|ZP_04561318.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|365105624|ref|ZP_09334773.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
gi|226906376|gb|EEH92294.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|363643138|gb|EHL82462.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
Length = 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 38/168 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
G+ DP K A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 121 GKHDPDNKF-AMPYMWATTGIGYNVDKVKAVLGPDAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 64 VNSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVW 100
+++P EV ++ A L L L N S+ ++ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 101 VAVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
VA+GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W + PE + +SM++S
Sbjct: 118 DP-GNEHSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVFFEPENLKKLSQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
EV ++ + + + A KA GD+ VA G+
Sbjct: 177 DEVFPAVLNYMGMDPRSENPADFKKAEAKLMTIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ N+A +PK G++LW DL AIPA + + + L P +
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPADASNPKEALSFINNLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P A+ ++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSASVGYANPNP--------AAKQYMDPELVNNP-EVYPPQEVLDKLYISTTPPQPI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|417455361|ref|ZP_12163500.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353634815|gb|EHC81292.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 349
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 134 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 193 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 252
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 253 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + P+ W + +PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVEKVKAALGTDVPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQASDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV+ A K+ NVA +PK GA + D++A+P+ ++
Sbjct: 242 GWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A + NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEANNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|212696357|ref|ZP_03304485.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
gi|212676635|gb|EEB36242.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
Length = 359
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 41/158 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY WG+ I Y K++K + + WK+LW P+ G I + RE +G
Sbjct: 127 DPNNQ-YSIPYFWGSFGIIYNNKKYKKEDFSS---WKNLWDPKFEGEILSFDGARETLG- 181
Query: 74 IAVQLNLALLAN-------------QSAHHLKAF----------------GIGDVWVAVG 104
+ LLAN Q+ L F G+ V +
Sbjct: 182 ------IGLLANGKSLNETDEKVLRQTKDELVGFMKNVKAILADEIRMYMAQGEADVGIT 235
Query: 105 WSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+S + A N++ +PK G+++W D IP S+
Sbjct: 236 FSGEASMAESINPNLSYTIPKEGSNIWFDTMVIPKTSK 273
>gi|220928335|ref|YP_002505244.1| family 1 extracellular solute-binding protein [Clostridium
cellulolyticum H10]
gi|219998663|gb|ACL75264.1| extracellular solute-binding protein family 1 [Clostridium
cellulolyticum H10]
Length = 350
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGTV I Y K+ ++ P++ W LW + +I M++S R+ IG
Sbjct: 123 FDPNNE-YSVPYMWGTVGIIYNKTMVKE----PVDSWNILWDKKYDKQIFMLDSLRDSIG 177
Query: 73 SIAVQLNLAL-------LANQSAHHLKAFGIGDVWV---------------AVGWSSDVL 110
+L +L L +K I +V AV WS D +
Sbjct: 178 VTLKKLGYSLNTKNKDELERAKNELIKQKDIVQAYVGDEVKDKMIMDEGAMAVVWSGDAV 237
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
++ V+PK G++LW D IP+ ++
Sbjct: 238 YMKSQNKDLEYVIPKEGSNLWFDSMVIPSNAK 269
>gi|339637800|emb|CCC16775.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus pentosus IG1]
Length = 356
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 133 SVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQQKYKNKIMLIDSARDVMGFALASMNQ 189
Query: 81 A--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
+ LLA ++ A +K + I + +AV WS S++L H
Sbjct: 190 SMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLDGNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|418326858|ref|ZP_12938035.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|420185169|ref|ZP_14691265.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
gi|365224167|gb|EHM65433.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|394255203|gb|EJE00160.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
Length = 357
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ + V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP ++ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKKV--------RNDYRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
A+LSD +
Sbjct: 340 ASLSDYN 346
>gi|387626642|ref|YP_006062817.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV104]
gi|444381932|ref|ZP_21180137.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8106]
gi|444384622|ref|ZP_21182716.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8203]
gi|301794427|emb|CBW36861.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV104]
gi|444252382|gb|ELU58846.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8203]
gi|444253531|gb|ELU59986.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PCS8106]
Length = 356
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 34/192 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + L P E LQ A
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKP------ENALQNA 294
Query: 170 RALPFKQEVIPG 181
+ + IP
Sbjct: 295 EYVGYSTPNIPA 306
>gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA R
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADGR 288
>gi|126665278|ref|ZP_01736260.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629906|gb|EBA00522.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 359
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 38/156 (24%)
Query: 11 GEIDPR-------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP--ELAGRI 61
IDPR ++ + PY WGT+ IAY++ P+ W DL +P EL GR+
Sbjct: 114 AHIDPRWRTVHEEAEVYSVPYFWGTLGIAYRQDLVA----FPVTSWMDLLQPAEELHGRV 169
Query: 62 SMVNSPREVIGSIAVQLNLAL-------------LANQSAHHLKAFGI-----------G 97
+M++ R++IG L +L L A +K + G
Sbjct: 170 AMISGTRDLIGVALKALGYSLNSTDIQELKEAEALLQAQAPAVKTYKTVSRDANSALVNG 229
Query: 98 DVWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWAD 132
V +++ ++S L +H +A V+PK G+++W D
Sbjct: 230 QVAMSMMYNSYALMVQEHHDEIAFVLPKEGSNIWVD 265
>gi|312871997|ref|ZP_07732077.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2062A-h1]
gi|311092450|gb|EFQ50814.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2062A-h1]
Length = 357
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 54/235 (22%)
Query: 2 RVYLRR-NDAGEIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDL 52
++ LR ++ IDP+ G + PY WGT+ I Y KF K + I+ W DL
Sbjct: 105 KINLRNISNIKNIDPQFMNQSFDYGNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDL 161
Query: 53 WRPELAGRISMVNSPREVIGSIAVQLNLALLANQS---------------------AHHL 91
W+ + +I +V+S R+++G + + ++ + S A L
Sbjct: 162 WKSKFKHQILLVDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIADEL 221
Query: 92 KAFGI-GDVWVAVGWSSD---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQI 147
K + I + + V WS + +L H+ VVP G++LW D IP ++ Q
Sbjct: 222 KMYMIRNEASIGVTWSGEARTMLNENPHLH--YVVPSEGSNLWLDNIVIPKTAK---NQA 276
Query: 148 GGRVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
G + +I F L A + I A+P+ L L LP + K +
Sbjct: 277 GA---------YAFINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 319
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 60/238 (25%)
Query: 21 AAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI 74
AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S E+I ++
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDRIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 75 AVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVLPA 112
L L + +A + KA G++ VA G+S DV A
Sbjct: 183 LNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQA 242
Query: 113 V-------KHMSNVAVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEF 164
K + +PK GA+LW D+ AIPA AS +E H +I +
Sbjct: 243 AARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVEEA-------------HAFINY 289
Query: 165 CLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
L + EVI S + GEL+ + D ++ PP E+L R
Sbjct: 290 LL--------RPEVIAAVSDYVGYANPNLKAGELMDQEVRGDASV---YPPQEVLDRL 336
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|260914210|ref|ZP_05920683.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631843|gb|EEX50021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 351
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 51/240 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 124 KGNKYSLPQLLGAPGIAFNTDSYKSENFT---TWGDLWKPEFQGKVQLLDDAREVF-NIA 179
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V V W+ V A
Sbjct: 180 LLKLGQDPNTKDPEIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQLWNGSVRIA 239
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + + +V PK G LW D AIP S K G H+ I + L +
Sbjct: 240 KKEQAPLDMVFPKEGPVLWVDTLAIPTTS----KNPDGA--------HKLINYLLSAKVS 287
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
+E+ P++ L LP E+ T A P AEIL + + + + +A
Sbjct: 288 AKLTEEI---GYPTSNVEALKLLPAEI--------TQDPAIYPTAEILQKSHWQDDVGDA 336
>gi|418411544|ref|ZP_12984812.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
gi|410893088|gb|EKS40879.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
Length = 357
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 50/247 (20%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 73 ---SIAVQLNLALL-----ANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+ LN L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNLTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
V+ + V+PK G++LW D IP ++ + G ++++ F L
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ---NKEGA---------YKFMNFLLDAQN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+ E + A+P+ ++ KLP ++ N P + R E + L +
Sbjct: 291 SAQ-NTEWVGYATPN--KAARSKLPKKV--------RNDYRFYPSKQEQQRLEVYKDLGQ 339
Query: 231 ATLSDMS 237
A+LSD +
Sbjct: 340 ASLSDYN 346
>gi|417389662|ref|ZP_12153396.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353621258|gb|EHC71130.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 339
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 130 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 188
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 189 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 248
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 249 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 293
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|85058903|ref|YP_454605.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sodalis glossinidius str. 'morsitans']
gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis
glossinidius str. 'morsitans']
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNKY-AVPYMWATTSIGYNVEKVKAVLGKDAPVNSWDLVLKPENLAKLKSCGVSFLDA 181
Query: 67 PREVIGSIA-----------------------VQLNLALLANQSAHHLKAFGIGDVWVAV 103
P E+ ++ ++L ++L S+ ++ GD+ V +
Sbjct: 182 PFEIYATVLNYLGKDPNSDNAANYTGPATDLLLKLRPSILYFHSSQYINDLANGDICVTI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW DV+ A K+ N+A +PK GA + D+ AIPA ++
Sbjct: 242 GWVGDVMQAANRAKEAKNGVNIAYSIPKEGALAFFDVLAIPADAK 286
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENFEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|120555050|ref|YP_959401.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
gi|120324899|gb|ABM19214.1| extracellular solute-binding protein, family 1 [Marinobacter
aquaeolei VT8]
Length = 368
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 60
+D +IDP G + PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKIDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGI 96
I+M++S E++ + + L +N S+ ++
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNITYFHSSRYIGDLAN 233
Query: 97 GDVWVAVGWSSDVLPAVKHM-----SNV--AVVPKSGASLWADLWAIPAAS 140
GD+ VA G+S D+L A NV +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|334881080|emb|CCB81895.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus pentosus MP-10]
Length = 356
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 133 SVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQQKYKNKIMLIDSARDVMGFALASMNR 189
Query: 81 A--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
+ LLA ++ A +K + I + +AV WS S++L H
Sbjct: 190 SMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLDGNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|296390225|ref|ZP_06879700.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAb1]
gi|416874544|ref|ZP_11918188.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334843128|gb|EGM21722.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
Length = 363
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 60/251 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G PY WGT IAY K R + AP++ W +++PE + ++ ++S
Sbjct: 118 DP-GNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDS 176
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
P EVI + L L+ ++QS + +A G+V VA+
Sbjct: 177 PTEVIPEVLHYLGLSPNSHQSEDYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIA 236
Query: 105 WSSDVLPAVKHMSNVAV-------VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
WS + A +PK GA+ W D+ AIP ++ +Q
Sbjct: 237 WSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ----------- 284
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
H ++++ L+ P + + A+P+ L+ L+ P++ PP E
Sbjct: 285 AHAFLDYLLRPEVVAPI-SDYVAYANPNKAADGLI---SAELRDNPNV-------YPPEE 333
Query: 218 ILARFEFLEPL 228
+ AR +E L
Sbjct: 334 VQARLYSVEML 344
>gi|443470634|ref|ZP_21060717.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442900404|gb|ELS26546.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 367
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 64/257 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y K R AP++ W L++ E R+S +++S
Sbjct: 122 DP-GNRYAVPYMWGTNGIGYNVDKVRAALGEQAPVDSWDLLFKEENLARLSQCGVALLDS 180
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKAFGI----------------------GDVWVAVG 104
P E++ + L L +N + KA + GD+ VAVG
Sbjct: 181 PSEILPIVLQYLGLPPNSNNPDDYQKAEALLLKLRPHIAYFNSSKFITDLSNGDICVAVG 240
Query: 105 WSSDVLP----AVKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
W+ +L AV+ + V + +PK GA LW D + KQ +GL+
Sbjct: 241 WAGGMLDAKANAVQAGNGVRIEYSLPKEGAPLWFDTLVL-------LKQAPHPAQGLA-- 291
Query: 158 IHQWIEFCLQTARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDT-NLIAGVPP 215
+I++ ++ P + P + SA + LV S +T N A P
Sbjct: 292 ---FIDYLMRPEVIAPITDYLRYPNGNRSA--TPLV-----------SAETRNNPAVYPS 335
Query: 216 AEILARFEFLEPLSEAT 232
AE +AR LEPL + T
Sbjct: 336 AETMARLFTLEPLPKKT 352
>gi|417340403|ref|ZP_12121730.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959170|gb|EHJ83510.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 79 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 138 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 197
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|418616543|ref|ZP_13179467.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU120]
gi|420182795|ref|ZP_14688929.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM049]
gi|420194320|ref|ZP_14700136.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM021]
gi|420213740|ref|ZP_14719042.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05005]
gi|420216888|ref|ZP_14722080.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05001]
gi|374820621|gb|EHR84697.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU120]
gi|394249831|gb|EJD95041.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM049]
gi|394265113|gb|EJE09777.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM021]
gi|394284927|gb|EJE29022.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05005]
gi|394291106|gb|EJE34937.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05001]
Length = 357
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLALLANQSAHHLKAFG------------IGDV----------WVAVGWSSDVLP 111
+L +L H +A +GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIYQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|333906639|ref|YP_004480225.1| family 1 extracellular solute-binding protein [Marinomonas
posidonica IVIA-Po-181]
gi|333476645|gb|AEF53306.1| extracellular solute-binding protein family 1 [Marinomonas
posidonica IVIA-Po-181]
Length = 354
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 60/248 (24%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAP-IEDWKDLWR-PELAGRISMVNSPR 68
E DP G+ C PY WGTV I Y K L P + W D + P I+M++ R
Sbjct: 126 AESDPNGEYCL-PYAWGTVGILYNKK------LVPELNSWADFFALPNDGKNIAMLDDMR 178
Query: 69 EVIG--------SIAVQLNLALLANQS-----AHHLKAFGI--------GDVWVAVGWSS 107
EVI S+ L A Q H++ AF GD+ A +
Sbjct: 179 EVISVGLITDGKSVNTTNRDDLKAAQDYIIKQKHNVSAFTYDSIPMVQSGDIAAAQWYVG 238
Query: 108 DVLPAVKHMSNVA-VVPKSGASLWA-DLWAIPAA-SRLETKQIGGRVRGLSPLIHQWIEF 164
+L ++ ++A V+PK GA+++ D+ + +A +++ K +++EF
Sbjct: 239 SMLYVFQNPDDLAYVIPKEGATMYQEDMCVLKSAPNKVNAK--------------KFLEF 284
Query: 165 CLQ-TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFE 223
Q AL KQ+ + + + VKL + L+ PS++ PPAE+ A+ +
Sbjct: 285 FTQPEIAALNTKQQ-----TNGTMNTEAVKLLPDSLRNNPSIN-------PPAEVKAKLQ 332
Query: 224 FLEPLSEA 231
+ L +
Sbjct: 333 LFKELGKG 340
>gi|15602126|ref|NP_245198.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720490|gb|AAK02345.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 358
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 53/241 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 131 KGNKYSLPQLLGAPGIAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 186
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V V W+ V A
Sbjct: 187 LLKLGQDPNTTDPAIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQLWNGSVRIA 246
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + + +V PK G LW D AIPA S K G H+ I + L A
Sbjct: 247 KKEQAPLNMVFPKEGPVLWVDTLAIPANS----KNPDGA--------HKLINYLLSAKVA 294
Query: 172 LPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+E+ P ++ ALE LP E+ T A P AEIL + + + +
Sbjct: 295 AQLAEEIGYPTSNLKALEL----LPSEV--------TQDPAVYPTAEILQNSHWQDDVGD 342
Query: 231 A 231
A
Sbjct: 343 A 343
>gi|417852729|ref|ZP_12498230.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216364|gb|EGP02484.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 348
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 53/241 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 121 KGNKYSLPQLLGAPGIAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 176
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V V W+ V A
Sbjct: 177 LLKLGQDPNTTDPAIIKQAYEELLKLRPNILSFNSDNPANSFISGEVEVGQLWNGSVRIA 236
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + + +V PK G LW D AIPA S K G H+ I + L A
Sbjct: 237 KKEQAPLNMVFPKEGPVLWVDTLAIPANS----KNPDGA--------HKLINYLLSAKVA 284
Query: 172 LPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+E+ P ++ ALE LP E+ T A P AEIL + + + +
Sbjct: 285 AQLAEEIGYPTSNLKALEL----LPSEV--------TQDPAVYPTAEILQNSHWQDDVGD 332
Query: 231 A 231
A
Sbjct: 333 A 333
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 36/160 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + Y WGT I Y K+K ++ I W +++PE+A + I ++++
Sbjct: 121 DP-GNEYSVNYMWGTTGIGYNKAKVKEALGTDRINSWDVVFKPEVASKLAGCGIHVLDAS 179
Query: 68 REVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVGW 105
E+ + L L ALL + S+ ++ A GD+ VAVG+
Sbjct: 180 SEITHAALNYLGLDPNSDNPDDLQKVEALLLSVRPNIRKFHSSEYINALANGDICVAVGY 239
Query: 106 SSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA 138
S DV A + +PK GA +W D AIPA
Sbjct: 240 SGDVFQARDRAAEAGQGVEIAYAIPKEGAQMWFDQMAIPA 279
>gi|392947604|ref|ZP_10313238.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus pentosus KCA1]
gi|392437173|gb|EIW15063.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus pentosus KCA1]
Length = 356
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 133 SVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQQKYKNKIMLIDSARDVMGFALASMNK 189
Query: 81 A--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
+ LLA ++ A +K + I + +AV WS S++L H
Sbjct: 190 SMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLDGNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|401683002|ref|ZP_10814891.1| ABC transporter, solute-binding protein [Streptococcus sp. AS14]
gi|400183684|gb|EJO17935.1| ABC transporter, solute-binding protein [Streptococcus sp. AS14]
Length = 356
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 98/240 (40%), Gaps = 53/240 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ----SIAVQLNLALLANQ------------------SAHHLKAFGI-GDVWVAVGWSSDV 109
S LN + ANQ A +K + I + + V +S +
Sbjct: 181 LGLNSDGHSLN-SKDANQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEA 239
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 240 RQMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRP 287
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 288 ENA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|359299977|ref|ZP_09185816.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
gi|402305490|ref|ZP_10824549.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400376603|gb|EJP29490.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 359
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 51/240 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE A ++ +++ REV +IA
Sbjct: 132 KGNKYSLPQLLGAPGIAFNTNDYKGDQFT---SWGDLWKPEFANKVQLLDDAREVF-NIA 187
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 188 LLKLGKNPNTTDPAEIKEAFEELKKLRSNVLSFNSDNPANSFISGEVSVGQLWNGSVRIA 247
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + + +V PK G LW D AIPA S+ + H+ I + L + +
Sbjct: 248 KKEKAPIDMVFPKEGPVLWVDTLAIPANSKNKENA------------HKLINYLLSASVS 295
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
KQ + P++ L +LP E+ T A P AEIL + + + + +A
Sbjct: 296 ---KQLTLEIGYPTSNVKALEELPKEI--------TQDPAIYPTAEILQKSHWQDDVGDA 344
>gi|149002771|ref|ZP_01827697.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS69]
gi|147759065|gb|EDK66059.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS69]
Length = 270
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 109 FDPGNKF-SIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 163
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 164 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 223
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 224 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 255
>gi|295092509|emb|CBK78616.1| Spermidine/putrescine-binding periplasmic protein [Clostridium cf.
saccharolyticum K10]
Length = 675
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 34/168 (20%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
YL + A DP G A PY WGTV I Y + ++ + P W DLW P G I M
Sbjct: 430 YLEK--AESFDP-GNRYAVPYTWGTVGILYNTERIKELGVQPPSRWADLWDPAYKGEILM 486
Query: 64 VNSPRE----VIGSIAVQLNLA----------LLANQSAHHLKAFGI---------GDVW 100
+S R+ + S+ +N LL Q ++A+ I G+
Sbjct: 487 QDSVRDAFMVALKSLGYSMNSTDEGELTQARDLLIAQKP-LVQAYVIDQVRDKMIGGEAA 545
Query: 101 VAVGWSSDVLPAVKHMS--NV-----AVVPKSGASLWADLWAIPAASR 141
V V +S ++L + ++ N+ V+P+ G ++W D W IP ++
Sbjct: 546 VGVIYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAK 593
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGQDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A +L L L N S+ ++ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D++ A K+ NVA +PK G + D++A+P+ ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGVLAFFDVFAMPSDAK 286
>gi|154252003|ref|YP_001412827.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154155953|gb|ABS63170.1| extracellular solute-binding protein family 1 [Parvibaculum
lavamentivorans DS-1]
Length = 363
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 2 RVYLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLW-RPELAGR 60
+Y R D DP G+ + PY WGTV I Y+KSK A + W L+ E AGR
Sbjct: 124 NIYPRFMDE-PFDP-GRKYSLPYMWGTVGIGYRKSKVS----AVPDSWGALYDSDEYAGR 177
Query: 61 ISMVNSPREVIGSIAVQLNLALLANQSAHH-------------LKAF---------GIGD 98
++++ +IG L +L + A + +KAF G+
Sbjct: 178 SALLSDCGTMIGCALKYLGYSLNSTDKAENEAAAELIIKQKGKIKAFAEDNGQDLLAAGE 237
Query: 99 VWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
V V + +S D+ + ++ VVPK G +W D+ AIPA++
Sbjct: 238 VDVTMEYSGDIAQLMSEDDDIGYVVPKEGGIIWEDVLAIPASA 280
>gi|170719319|ref|YP_001747007.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757322|gb|ACA70638.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 367
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 108/271 (39%), Gaps = 66/271 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY +GTV+I + K + + AP++ W L++ E + +++++S
Sbjct: 122 DPGNKF-AVPYMYGTVLIGFNPDKVKAVLGDTAPVDSWDLLFKEENIAKLKQCGVALLDS 180
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
P E++ L L ALL S+ ++ GD+ VAVG
Sbjct: 181 PSEILPLALQYLGLDPNSSKPDDYKQAEALLQKIRPYITYFHSSKYMADIANGDICVAVG 240
Query: 105 WSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIP-AASRLETKQIGGRVRGLSP 156
+S A + N VV PK GA +W D+ AIP A+ E
Sbjct: 241 YSGSFSQAANRARDAKNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDA----------- 289
Query: 157 LIHQWIEFCLQTARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPP 215
H +I + L+ P V P + A E ++ P+L P
Sbjct: 290 --HTFINYLLRPEVIAPISDFVGYPNPNKDATEKV-----SPAIRNNPNL-------YPT 335
Query: 216 AEILARFEFLEPLS-EATLSDMSGW-EIGSG 244
AE +A+ L+PL+ EA + W I SG
Sbjct: 336 AEAMAKLYTLKPLTREAERARTRAWTRIKSG 366
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K + + I+ W L+ PE + +SM++S
Sbjct: 118 DP-GNSHSVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVLFEPENIKKLSACGVSMMDSA 176
Query: 68 REVIGSIA----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGW 105
EV ++ +Q+ + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAMLNYMGMDPRSENPEDFKKAEAKLLQIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAVKHMS------NVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A N+A +PK GA+LW DL AIPA + + L P +
Sbjct: 237 SGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPADASNPKEAHAFINYLLDPQV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A P A+ ++ LV P E+ + LD I+ PP I
Sbjct: 297 IAKVSASVGYANPNP--------AAKQYMDPELVSNP-EVYPPQEVLDKLYISTTPPQSI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103]
gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103]
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKATLGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GWS D+L A K+ N+ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|297588236|ref|ZP_06946879.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
gi|297573609|gb|EFH92330.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
Length = 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 34/151 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGTV I Y K+K + ++ W LW + I M+NS R+ +
Sbjct: 113 DYDPKNEYTV-PYMWGTVGILYNKNKVKDK----VDSWNILWDEKYKDNIIMMNSTRDTL 167
Query: 72 G----SIAVQLN---------------------LALLANQSAHHLKAFGIGDVWVAVGWS 106
G + +N LA L +++ + + + +AV +S
Sbjct: 168 GVALKRLGYSMNSRNEKELEQAKESLIKQKDIVLAYLVDETKNQMVN---EEADIAVMYS 224
Query: 107 SDVLPAVKHMSNVA-VVPKSGASLWADLWAI 136
D + A N+ V+PK G++LW D AI
Sbjct: 225 GDAIVAKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|418630689|ref|ZP_13193166.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU128]
gi|420213112|ref|ZP_14718450.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM001]
gi|374836897|gb|EHS00471.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU128]
gi|394276731|gb|EJE21066.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM001]
Length = 357
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP + PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 188 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAY 246
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA +W D + IP+ S+ + L H++I F Q
Sbjct: 247 QGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFMYQPE 294
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSL 205
+ E++ SA + LP E LK P++
Sbjct: 295 H----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 326
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP + PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 188 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAY 246
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA +W D + IP+ S+ + L H++I F Q
Sbjct: 247 QGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFMYQPE 294
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSL 205
+ E++ SA + LP E LK P++
Sbjct: 295 H----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 326
>gi|418189574|ref|ZP_12826089.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47373]
gi|419495604|ref|ZP_14035322.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47461]
gi|421303503|ref|ZP_15754167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA17484]
gi|353856716|gb|EHE36685.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47373]
gi|379595686|gb|EHZ60494.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47461]
gi|395902125|gb|EJH13061.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA17484]
Length = 356
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + ++P+ L LP E + K A P E + E E
Sbjct: 289 NALQ-NAEYVGYSTPNLPAKEL--LPEETKEDK--------AFYPDVETMKHLEVYEKFD 337
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP + PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 117 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A + + G+ V + W+ +
Sbjct: 172 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQV-PYVSGETSVGMQWNGNAY 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA +W D + IP+ S+ + L H++I F Q
Sbjct: 231 QGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFMYQPE 278
Query: 170 RALPFKQEVIPG-ASPSALESTLVKLPGELLKGKPSL 205
+ E++ SA + LP E LK P++
Sbjct: 279 H----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 310
>gi|398871854|ref|ZP_10627162.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398204929|gb|EJM91722.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AIPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 185
Query: 74 ------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+ ++ N+A S+ ++ G++ VAVG+S DV
Sbjct: 186 ALHYLGYPVNDQNKQHIAEAQALFMRIRPNVAYF--HSSKYISDLANGNICVAVGYSGDV 243
Query: 110 LPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW 161
L A +PK GA+ + D+ AIP A+ +E + + +I
Sbjct: 244 LQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMKFLMRPDVIADI 303
Query: 162 ---IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLPGE 197
I + A A P E I PG+ P A+ +TL +P +
Sbjct: 304 TNNIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 346
>gi|126665279|ref|ZP_01736261.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629907|gb|EBA00523.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 348
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 42/164 (25%)
Query: 13 IDPRGKI-------CAAPYRWGTVVIAYKKSKFRKHNLAP--IEDWKDLWRP--ELAGRI 61
IDPR +I PY WGT+ I Y++ +L P + W DL +P EL G+I
Sbjct: 109 IDPRRRIEFEKAEDFGVPYFWGTIGIVYRQ------DLVPFAVSSWMDLLQPVEELHGKI 162
Query: 62 SMVNSPREVIG----SIAVQLNL----------ALLANQ----------SAHHLKAFGIG 97
SM+ ++IG ++ LN ALL Q S + A G
Sbjct: 163 SMIGDRADMIGVALKALGYSLNSTNEDEMKEAEALLEAQAPAVNTYRYLSLNEDSALLTG 222
Query: 98 DVWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
V +++ ++ D ++ N+A V+PK G ++W D ++ +AS
Sbjct: 223 QVVMSMMYNGDTRMLQEYNDNIAFVLPKEGGNIWTDYLSVLSAS 266
>gi|398892965|ref|ZP_10645887.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398184856|gb|EJM72287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 414
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + K ++ + AP W L++PE A + IS ++SP E+I +
Sbjct: 175 AIPYMWGSIGIGFNPQKVKEVLGSNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 234
Query: 74 ------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+ ++ N+A S+ ++ G++ VAVG+S DV
Sbjct: 235 ALHYLGYPVNDQNKQHIAEAEALFMKIRPNVAYF--HSSKYISDLANGNICVAVGYSGDV 292
Query: 110 LPAVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPL---I 158
L A +PK GA+ + D+ AIP A+ +E + + I
Sbjct: 293 LQAKARAQEAGNKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADI 352
Query: 159 HQWIEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPGE 197
I + A A P E I PG+ P A+ +TL +P +
Sbjct: 353 TNNIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 395
>gi|418096465|ref|ZP_12733577.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16531]
gi|353769150|gb|EHD49671.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16531]
Length = 339
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 109 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 163
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 164 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 223
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 224 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 255
>gi|381405138|ref|ZP_09929822.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
gi|380738337|gb|EIB99400.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
Length = 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 52/192 (27%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGTDAPLNSWDLVMKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA--------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLS 155
GWS D+L A K+ ++ A VPK GA + D+ AIP + K I G
Sbjct: 242 GWSGDILQA-KNRADAAKNGVHLGYSVPKEGALAFFDMMAIPK----DAKNIDGA----- 291
Query: 156 PLIHQWIEFCLQ 167
+ W+ + +
Sbjct: 292 ---YAWLNYIMD 300
>gi|378774664|ref|YP_005176907.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|386834628|ref|YP_006239945.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|417854587|ref|ZP_12499874.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421262976|ref|ZP_15714061.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425062948|ref|ZP_18466073.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|425065036|ref|ZP_18468156.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|338217662|gb|EGP03508.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|356597212|gb|AET15938.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|385201331|gb|AFI46186.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|401690389|gb|EJS85670.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404383654|gb|EJZ80105.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|404384490|gb|EJZ80924.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 348
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 53/241 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 121 KGNKYSLPQLLGAPGIAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 176
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V V W+ V A
Sbjct: 177 LLKLGQDPNTTDPAIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQLWNGSVRIA 236
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + + +V PK G LW D AIPA S K G H+ I + L A
Sbjct: 237 KKEQAPLNMVFPKEGPVLWVDTLAIPANS----KNPDGA--------HKLINYLLSAKVA 284
Query: 172 LPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSE 230
+E+ P ++ ALE LP E+ T A P AEIL + + + +
Sbjct: 285 AQLAEEIGYPTSNLKALEL----LPSEV--------TQDPAVYPTAEILQNSHWQDDVGD 332
Query: 231 A 231
A
Sbjct: 333 A 333
>gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter
rodentium ICC168]
gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter
rodentium ICC168]
Length = 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGADAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTDAKDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGINISFSIPKEGAMAFFDVFAMPADAK 287
>gi|418620873|ref|ZP_13183667.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU123]
gi|374831080|gb|EHR94830.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU123]
Length = 357
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|416874859|ref|ZP_11918408.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
gi|334842601|gb|EGM21205.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
Length = 354
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQL----------------NLALLAN------QSAHHLKAFGIGDVW 100
+++ P+E+ G+ L L L A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQTLILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDAATQARLEPLKDLN 337
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 63/249 (25%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 64
E DP G A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 65 NSPREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWV 101
++P E+ ++ A L L L + S+ ++ GD+ V
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTNEADYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICV 239
Query: 102 AVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRVRG 153
A+GW+ DV+ A K+ N++ +PK GA + D++AIP A L++
Sbjct: 240 AIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA-------- 291
Query: 154 LSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
+Q++ + L+ V A+P+ + LVK E ++ P++
Sbjct: 292 -----YQFLNYLLKPDVIANVSNHVY-YANPNKEATALVK---EEVRNNPNI-------Y 335
Query: 214 PPAEILARF 222
PPA+I A+
Sbjct: 336 PPADIRAKL 344
>gi|57866622|ref|YP_188273.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis RP62A]
gi|418611619|ref|ZP_13174697.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU117]
gi|418623457|ref|ZP_13186167.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU125]
gi|418627407|ref|ZP_13189984.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU126]
gi|418629760|ref|ZP_13192255.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU127]
gi|420164817|ref|ZP_14671531.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM088]
gi|420234280|ref|ZP_14738847.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051475]
gi|57637280|gb|AAW54068.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis RP62A]
gi|374822379|gb|EHR86405.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU117]
gi|374829607|gb|EHR93406.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU126]
gi|374830575|gb|EHR94344.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU125]
gi|374832990|gb|EHR96691.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU127]
gi|394236730|gb|EJD82234.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM088]
gi|394304408|gb|EJE47811.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051475]
Length = 357
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|116051607|ref|YP_789554.1| polyamine ABC transporter [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173152|ref|ZP_15630906.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
gi|115586828|gb|ABJ12843.1| polyamine ABC transporter protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536453|gb|EKA46093.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
Length = 354
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDATTQARLEPLKDLN 337
>gi|27467718|ref|NP_764355.1| potD protein [Staphylococcus epidermidis ATCC 12228]
gi|251810555|ref|ZP_04825028.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876538|ref|ZP_06285403.1| bacterial extracellular solute-binding protein [Staphylococcus
epidermidis SK135]
gi|417645403|ref|ZP_12295306.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU144]
gi|417657584|ref|ZP_12307244.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU028]
gi|417911560|ref|ZP_12555264.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU105]
gi|417913958|ref|ZP_12557615.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU109]
gi|418604032|ref|ZP_13167401.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU041]
gi|418607631|ref|ZP_13170855.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU057]
gi|418610416|ref|ZP_13173530.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU065]
gi|418664394|ref|ZP_13225876.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU081]
gi|419769920|ref|ZP_14296010.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-250]
gi|419772705|ref|ZP_14298732.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-K]
gi|420170079|ref|ZP_14676652.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM070]
gi|420173690|ref|ZP_14680180.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM067]
gi|420187673|ref|ZP_14693692.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM039]
gi|420196784|ref|ZP_14702521.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM020]
gi|420203267|ref|ZP_14708849.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM018]
gi|420206556|ref|ZP_14712065.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM008]
gi|420210189|ref|ZP_14715619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM003]
gi|420219482|ref|ZP_14724499.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH04008]
gi|420226914|ref|ZP_14731689.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH05003]
gi|420231599|ref|ZP_14736246.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051668]
gi|421607375|ref|ZP_16048620.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis AU12-03]
gi|27315262|gb|AAO04397.1|AE016746_187 potD protein [Staphylococcus epidermidis ATCC 12228]
gi|251805966|gb|EES58623.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294626|gb|EFA87155.1| bacterial extracellular solute-binding protein [Staphylococcus
epidermidis SK135]
gi|329732835|gb|EGG69181.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU144]
gi|329734239|gb|EGG70555.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU028]
gi|341652840|gb|EGS76616.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU105]
gi|341653996|gb|EGS77754.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU109]
gi|374403985|gb|EHQ74974.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU057]
gi|374404524|gb|EHQ75496.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU065]
gi|374406049|gb|EHQ76955.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU041]
gi|374410553|gb|EHQ81297.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU081]
gi|383357733|gb|EID35198.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-250]
gi|383358960|gb|EID36399.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-K]
gi|394239500|gb|EJD84939.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM067]
gi|394242674|gb|EJD88064.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM070]
gi|394255832|gb|EJE00771.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM039]
gi|394266988|gb|EJE11597.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM020]
gi|394268324|gb|EJE12887.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM018]
gi|394276746|gb|EJE21080.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM003]
gi|394277501|gb|EJE21823.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM008]
gi|394288972|gb|EJE32867.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH04008]
gi|394297912|gb|EJE41502.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH05003]
gi|394302566|gb|EJE46010.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051668]
gi|406656909|gb|EKC83303.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis AU12-03]
Length = 357
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418825311|ref|ZP_13380614.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392816284|gb|EJA72213.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 325
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 79 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 138 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 197
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505532|ref|ZP_15952470.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343941|gb|EJO92313.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 365
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 45/218 (20%)
Query: 13 IDPR--GKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
+DP G + PY WGT+ I Y K + + AP++ W +++PE + +S
Sbjct: 116 LDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDDAPVDSWDLVFKPENMEKLKSCGVSF 175
Query: 64 VNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVWV 101
++SP E++ + L A +++ S+ ++ G++ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSSKADELKKAEELFLSIRPSVAYFHSSKYISDLANGNICV 235
Query: 102 AVGWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPA-ASRLETKQIGGRV-- 151
A+G+S D+ + K+ NV +PK GA + D+ A+PA A +E +
Sbjct: 236 AIGYSGDIYQSKARAEEAKNGVNVGYNIPKEGAGSFFDMLAVPADAKNVEAAHVFLNYLM 295
Query: 152 -RGLSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 185
+ I +++F A A P E + PG P+
Sbjct: 296 EPAVMANITNYVQFPNGNAAATPLVDEALRTDPGVYPT 333
>gi|375336813|ref|ZP_09778157.1| extracellular solute-binding protein [Succinivibrionaceae bacterium
WG-1]
Length = 369
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 37/170 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAP--IEDWKDLWRPELAGR-----ISMV 64
++DP ++ A PY GT IAY K K+ A ++ W ++PE+ + I+++
Sbjct: 121 DVDPGEELHAVPYLSGTTGIAYNVDKVAKYLGADFKVDSWDVFFKPEILAKLKPCGIAVL 180
Query: 65 NSPREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVA 102
N+P E++G+ L L ALL S+ ++ GD+ +
Sbjct: 181 NAPTEIMGTAMHYLGLNPNSLNPKDYKPAEALLIEMSRNVTYFHSSQNINDLANGDICIT 240
Query: 103 VGWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPA-ASRLET 144
+ WS D++ A + N+ +VPK G ++ D AIP A LE
Sbjct: 241 MAWSGDMMQAKARAAEANNGVNIEFIVPKEGGLIFYDNMAIPKDAPHLEN 290
>gi|148985661|ref|ZP_01818815.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP3-BS71]
gi|387757664|ref|YP_006064643.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae OXC141]
gi|418232391|ref|ZP_12858978.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07228]
gi|418236848|ref|ZP_12863416.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19690]
gi|419480239|ref|ZP_14020044.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19101]
gi|419499935|ref|ZP_14039629.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47597]
gi|147922142|gb|EDK73264.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP3-BS71]
gi|301800253|emb|CBW32872.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae OXC141]
gi|353887118|gb|EHE66898.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07228]
gi|353893080|gb|EHE72828.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19690]
gi|379570193|gb|EHZ35157.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19101]
gi|379599243|gb|EHZ64026.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47597]
gi|429316292|emb|CCP35974.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN034156]
gi|429319634|emb|CCP32927.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN034183]
gi|429321451|emb|CCP34901.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN994039]
gi|429323271|emb|CCP30942.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPN994038]
Length = 356
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKELQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + ++P+ L LP E + K A P E + E E
Sbjct: 289 NALQ-NAEYVGYSTPNLPAKKL--LPEETKEDK--------AFYPDVETMKHLEVYEKFD 337
>gi|437473908|ref|ZP_20766015.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224831|gb|ELO06780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
Length = 383
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 137 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 195
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 196 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 255
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 256 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 300
>gi|309806197|ref|ZP_07700213.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 03V1-b]
gi|329920012|ref|ZP_08276890.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
SPIN 1401G]
gi|308167416|gb|EFO69579.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LactinV 03V1-b]
gi|328936783|gb|EGG33223.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
SPIN 1401G]
Length = 250
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 53/224 (23%)
Query: 12 EIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
IDP+ G + PY WGT+ I Y KF K + I+ W DLW+ + +I +
Sbjct: 9 NIDPQFMNQSFDYGNNYSIPYFWGTLGIIYN-DKFVK--MGEIKHWNDLWKSKFKHQILL 65
Query: 64 VNSPREVIGSIAVQLNLALLANQS---------------------AHHLKAFGI-GDVWV 101
V+S R+++G + + ++ + S A LK + I + +
Sbjct: 66 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIADELKMYMIRNEASI 125
Query: 102 AVGWSSD---VLPAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
V WS + +L H+ VVP G++LW D IP ++ Q G
Sbjct: 126 GVTWSGEARTMLNENPHLH--YVVPSEGSNLWLDNIVIPKTAK---NQAGA--------- 171
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
+ +I F L A + I A+P+ L L LP + K +
Sbjct: 172 YAFINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 212
>gi|295115321|emb|CBL36168.1| Spermidine/putrescine-binding periplasmic protein
[butyrate-producing bacterium SM4/1]
Length = 543
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 34/168 (20%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
YL ++++ DP G A PY WGTV I Y + + + P W DLW P G I M
Sbjct: 298 YLEKSES--FDP-GNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILM 354
Query: 64 VNSPRE----VIGSIAVQLN------LA----LLANQSAHHLKAFGI---------GDVW 100
+S R+ + S+ +N LA LL Q ++A+ I G+
Sbjct: 355 QDSVRDAFMVALKSLGYSMNSTDEGELAQARDLLIAQKP-LVQAYVIDQVRDKMIGGEAA 413
Query: 101 VAVGWSSDVLPAVKHMSNV-------AVVPKSGASLWADLWAIPAASR 141
V V +S ++L + ++ V+P+ G ++W D W IP ++
Sbjct: 414 VGVIYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAK 461
>gi|52424864|ref|YP_088001.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306916|gb|AAU37416.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
Length = 382
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 30/153 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP K + P G IAY ++ + W DLW+PE AG++ +++ REV +
Sbjct: 153 DPNNK-YSLPQLLGAPGIAYNTQTYKGSDFT---SWGDLWKPEFAGKVQLLDDAREVF-N 207
Query: 74 IA-----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
IA ++L +L+ S + AF G+V V W+ V
Sbjct: 208 IALLKLGKNPNTQDPAEIKAAYEELLKLRPNVLSFNSDNPANAFISGEVEVGQLWNGSVR 267
Query: 111 PAVKHM--SNVAVVPKSGASLWADLWAIPAASR 141
A K S + PK G LW D AIPA S+
Sbjct: 268 IAKKEQPGSIDMIFPKEGPVLWVDNLAIPATSK 300
>gi|402702295|ref|ZP_10850274.1| extracellular solute-binding protein [Pseudomonas fragi A22]
Length = 366
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY +GTV+I + +K + + AP++ W +++PE + ++M++S
Sbjct: 121 DP-GNQYAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDS 179
Query: 67 PREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P E++ + +++ + SA ++ GD+ VA+G
Sbjct: 180 PSEILPLALHYLGLDPNSQNPADYEKAKELMLKVRPYITYFNSAKYMTDIANGDICVAIG 239
Query: 105 WSSDVLPA---VKHMSNVAVV----PKSGASLWADLWAIPAASR 141
+S K N VV PK GA +W D +AIP +++
Sbjct: 240 YSGSFYQFGNRAKESGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|419442736|ref|ZP_13982764.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13224]
gi|421227552|ref|ZP_15684256.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2072047]
gi|421234310|ref|ZP_15690929.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061617]
gi|379552037|gb|EHZ17128.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13224]
gi|395595254|gb|EJG55488.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2072047]
gi|395600902|gb|EJG61056.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2061617]
Length = 356
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 41/169 (24%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G AAPY WGT I Y K + + I+ W ++ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWAVIFEPENAAKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
I+ ++S E+I ++ L L + +A + KA
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYRKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPA 138
G++ VA G+S DV A K + +PK G +LW D+ AIPA
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGGNLWFDMLAIPA 275
>gi|417698783|ref|ZP_12347955.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41317]
gi|418148768|ref|ZP_12785532.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13856]
gi|419453494|ref|ZP_13993466.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP03]
gi|419506292|ref|ZP_14045953.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49194]
gi|332200828|gb|EGJ14900.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41317]
gi|353811829|gb|EHD92066.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13856]
gi|379608206|gb|EHZ72952.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49194]
gi|379626227|gb|EHZ90847.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP03]
Length = 356
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|418146584|ref|ZP_12783362.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13637]
gi|353812159|gb|EHD92394.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13637]
Length = 356
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|260774066|ref|ZP_05882981.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611027|gb|EEX36231.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 344
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 55/245 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ + + PY WG ++Y + I W DLW P+ ++ +++ R+V G
Sbjct: 117 DPKNQ-YSLPYIWGITGLSYNAAYLPNG----ISRWADLWDPKYVRQVMLIDDMRDVFG- 170
Query: 74 IAVQLN------------------------LALLANQSAHHLKAFGIGDVWVAVGWSSDV 109
+A++LN LL N A H+ + G+V + + W+ +
Sbjct: 171 MALKLNGFSINTQNEAEIEKAYQSLVALKRNVLLYNSDAPHV-PYVSGEVALGMQWNGNA 229
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
+ + + V+P+ GA LW D + IP+ S + L H++I F Q
Sbjct: 230 FQGQEELPELTFVMPEEGAVLWMDNFTIPSGSNNKA------------LAHKFINFMYQA 277
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
+ E++ ++ + L + L+ PS+ P E + + EF+ +
Sbjct: 278 EN----QAEIVNSLGYASATQSGRALLADELRNNPSI-------FPSDEEMQKGEFINDV 326
Query: 229 SEATL 233
L
Sbjct: 327 GPEAL 331
>gi|418004716|ref|ZP_12644729.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW1]
gi|410548952|gb|EKQ23134.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW1]
Length = 357
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSSNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|378767926|ref|YP_005196396.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
gi|386015231|ref|YP_005933511.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|386080026|ref|YP_005993551.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|354989207|gb|AER33331.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|365187409|emb|CCF10359.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
Length = 369
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GWS D+L A K+ N+ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 37/160 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A Y WGT I Y + R+ A + W + P A + I M++S
Sbjct: 130 DP-GNTYAVDYMWGTTGIGYNVAAVRERLGANATVNSWSVVLNPASANKLKECGIMMLDS 188
Query: 67 PREVIGSIAVQL----------NLALLAN------------QSAHHLKAFGIGDVWVAVG 104
P ++I S+ ++ L+ + S+ +++A GD+ +AVG
Sbjct: 189 PEDLIPSMLPAFGAKADSKRWDDMTLVTDALYKVRGAVRKFHSSEYIQALANGDICLAVG 248
Query: 105 WSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIP 137
+S D++ A K+ ++A VVPK GA +W D +AIP
Sbjct: 249 YSGDIMQAKRRAEEAKNGIDIAYVVPKEGALMWFDTFAIP 288
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP+ K A PY WGT I Y K + P + + L+ P+ A +IS M++S
Sbjct: 121 DPQNKF-AVPYLWGTTGIGYNLEKVKAVLGEEPPFDSLELLFNPKYAEKISSCGFSMMDS 179
Query: 67 PREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVG 104
E++ L L + S+ ++ GD+ VA G
Sbjct: 180 ADEMMSQALTYLKLDPNSTNPDDYKLAGEAIAKVRPYVTYFHSSRYIIDLANGDICVAFG 239
Query: 105 WSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
+S D+ A + N V+ PK GA+LW D+ AIPA ++
Sbjct: 240 YSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDMLAIPADAK 283
>gi|148547784|ref|YP_001267886.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|395449383|ref|YP_006389636.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|421521263|ref|ZP_15967922.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|148511842|gb|ABQ78702.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
gi|388563380|gb|AFK72521.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|402755203|gb|EJX15678.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 362
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + + KA GDV VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANP--------DAKAYMDASLVNNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|15901240|ref|NP_345844.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae TIGR4]
gi|111658580|ref|ZP_01409237.1| hypothetical protein SpneT_02000255 [Streptococcus pneumoniae
TIGR4]
gi|148989507|ref|ZP_01820866.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP6-BS73]
gi|148997561|ref|ZP_01825166.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP11-BS70]
gi|149007344|ref|ZP_01831002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP18-BS74]
gi|168484563|ref|ZP_02709515.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1873-00]
gi|168491289|ref|ZP_02715432.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC0288-04]
gi|168575846|ref|ZP_02721761.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae MLV-016]
gi|194398708|ref|YP_002038032.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae G54]
gi|221232126|ref|YP_002511279.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae ATCC 700669]
gi|225859152|ref|YP_002740662.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae 70585]
gi|237651175|ref|ZP_04525427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CCRI 1974]
gi|237821257|ref|ZP_04597102.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CCRI 1974M2]
gi|303254542|ref|ZP_07340646.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae BS455]
gi|303258982|ref|ZP_07344961.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP-BS293]
gi|303261666|ref|ZP_07347613.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS292]
gi|303264335|ref|ZP_07350255.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS397]
gi|303265866|ref|ZP_07351763.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS457]
gi|303268199|ref|ZP_07353998.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS458]
gi|307068039|ref|YP_003877005.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
pneumoniae AP200]
gi|307127045|ref|YP_003879076.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae 670-6B]
gi|387759538|ref|YP_006066516.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV200]
gi|405760680|ref|YP_006701276.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPNA45]
gi|410476771|ref|YP_006743530.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus pneumoniae gamPNI0373]
gi|415699264|ref|ZP_11457534.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 459-5]
gi|415749808|ref|ZP_11477752.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV35]
gi|415752496|ref|ZP_11479607.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV36]
gi|417677109|ref|ZP_12326518.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17545]
gi|417686830|ref|ZP_12336106.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41301]
gi|417694278|ref|ZP_12343466.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47901]
gi|417696562|ref|ZP_12345741.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47368]
gi|418092000|ref|ZP_12729142.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44452]
gi|418107809|ref|ZP_12744847.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41410]
gi|418110347|ref|ZP_12747370.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49447]
gi|418112723|ref|ZP_12749723.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41538]
gi|418121471|ref|ZP_12758414.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44194]
gi|418123721|ref|ZP_12760653.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44378]
gi|418128263|ref|ZP_12765157.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP170]
gi|418130537|ref|ZP_12767420.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07643]
gi|418132176|ref|ZP_12769051.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11304]
gi|418137452|ref|ZP_12774291.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11663]
gi|418139708|ref|ZP_12776534.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13338]
gi|418144322|ref|ZP_12781120.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13494]
gi|418155366|ref|ZP_12792095.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16242]
gi|418160081|ref|ZP_12796780.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17227]
gi|418169400|ref|ZP_12806043.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19077]
gi|418176187|ref|ZP_12812781.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41437]
gi|418178442|ref|ZP_12815025.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41565]
gi|418180738|ref|ZP_12817308.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41688]
gi|418187372|ref|ZP_12823897.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47360]
gi|418193978|ref|ZP_12830469.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47439]
gi|418200302|ref|ZP_12836747.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47976]
gi|418219115|ref|ZP_12845781.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP127]
gi|418221427|ref|ZP_12848080.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47751]
gi|418225765|ref|ZP_12852393.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP112]
gi|418230104|ref|ZP_12856707.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP01]
gi|418238934|ref|ZP_12865487.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419457806|ref|ZP_13997750.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02254]
gi|419460205|ref|ZP_14000134.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02270]
gi|419462551|ref|ZP_14002456.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02714]
gi|419466927|ref|ZP_14006809.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05248]
gi|419471292|ref|ZP_14011151.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07914]
gi|419473454|ref|ZP_14013304.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13430]
gi|419478033|ref|ZP_14017857.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18068]
gi|419482443|ref|ZP_14022231.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40563]
gi|419489195|ref|ZP_14028944.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44386]
gi|419491317|ref|ZP_14031055.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47179]
gi|419504145|ref|ZP_14043814.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47760]
gi|419512715|ref|ZP_14052349.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05578]
gi|419514905|ref|ZP_14054530.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae England14-9]
gi|419516989|ref|ZP_14056605.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02506]
gi|419521316|ref|ZP_14060911.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05245]
gi|419526107|ref|ZP_14065669.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14373]
gi|419532619|ref|ZP_14072134.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47794]
gi|421210888|ref|ZP_15667876.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070035]
gi|421232108|ref|ZP_15688749.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080076]
gi|421238038|ref|ZP_15694608.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071247]
gi|421243302|ref|ZP_15699820.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081074]
gi|421245245|ref|ZP_15701743.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081685]
gi|421247642|ref|ZP_15704126.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082170]
gi|421249621|ref|ZP_15706078.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082239]
gi|421270800|ref|ZP_15721655.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR48]
gi|421272951|ref|ZP_15723793.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR55]
gi|421275131|ref|ZP_15725960.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52612]
gi|421283517|ref|ZP_15734304.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04216]
gi|421296221|ref|ZP_15746932.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA58581]
gi|421298797|ref|ZP_15749484.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60080]
gi|421313649|ref|ZP_15764239.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47562]
gi|444394448|ref|ZP_21191999.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0002]
gi|444397828|ref|ZP_21195311.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0006]
gi|444401990|ref|ZP_21199167.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0008]
gi|444404486|ref|ZP_21201439.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0009]
gi|444407443|ref|ZP_21204110.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0010]
gi|444414693|ref|ZP_21210945.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0199]
gi|14972873|gb|AAK75484.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae TIGR4]
gi|147756616|gb|EDK63657.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP11-BS70]
gi|147761148|gb|EDK68116.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP18-BS74]
gi|147925050|gb|EDK76131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP6-BS73]
gi|172042234|gb|EDT50280.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1873-00]
gi|183574362|gb|EDT94890.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC0288-04]
gi|183578237|gb|EDT98765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae MLV-016]
gi|194358375|gb|ACF56823.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae G54]
gi|220674587|emb|CAR69150.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae ATCC 700669]
gi|225720264|gb|ACO16118.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae 70585]
gi|301802127|emb|CBW34863.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae INV200]
gi|302598510|gb|EFL65552.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae BS455]
gi|302637246|gb|EFL67734.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP14-BS292]
gi|302639925|gb|EFL70381.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP-BS293]
gi|302642278|gb|EFL72626.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS458]
gi|302644601|gb|EFL74851.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS457]
gi|302646147|gb|EFL76374.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae BS397]
gi|306409576|gb|ADM85003.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
pneumoniae AP200]
gi|306484107|gb|ADM90976.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae 670-6B]
gi|332074708|gb|EGI85182.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17545]
gi|332074966|gb|EGI85438.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41301]
gi|332201837|gb|EGJ15907.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47368]
gi|332203215|gb|EGJ17283.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47901]
gi|353764100|gb|EHD44650.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44452]
gi|353779992|gb|EHD60456.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41410]
gi|353782550|gb|EHD62984.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA49447]
gi|353783085|gb|EHD63514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41538]
gi|353792307|gb|EHD72679.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44194]
gi|353796382|gb|EHD76725.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44378]
gi|353799261|gb|EHD79581.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP170]
gi|353801861|gb|EHD82161.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07643]
gi|353807842|gb|EHD88111.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11304]
gi|353808773|gb|EHD89038.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13494]
gi|353820744|gb|EHE00927.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA16242]
gi|353821814|gb|EHE01990.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA17227]
gi|353834585|gb|EHE14686.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA19077]
gi|353841626|gb|EHE21681.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41437]
gi|353842501|gb|EHE22547.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41565]
gi|353845440|gb|EHE25482.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA41688]
gi|353851122|gb|EHE31120.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47360]
gi|353859198|gb|EHE39153.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47439]
gi|353865349|gb|EHE45258.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47976]
gi|353874251|gb|EHE54107.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP127]
gi|353874737|gb|EHE54591.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47751]
gi|353880962|gb|EHE60776.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP112]
gi|353887626|gb|EHE67404.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP01]
gi|353893336|gb|EHE73082.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|353901009|gb|EHE76557.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11663]
gi|353905181|gb|EHE80620.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13338]
gi|379531024|gb|EHY96260.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02714]
gi|379531210|gb|EHY96445.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02270]
gi|379531679|gb|EHY96913.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02254]
gi|379538616|gb|EHZ03796.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05245]
gi|379543640|gb|EHZ08789.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05248]
gi|379546008|gb|EHZ11147.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA07914]
gi|379551808|gb|EHZ16901.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA13430]
gi|379558367|gb|EHZ23403.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14373]
gi|379565469|gb|EHZ30461.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA18068]
gi|379579572|gb|EHZ44476.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40563]
gi|379586737|gb|EHZ51587.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44386]
gi|379592679|gb|EHZ57494.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47179]
gi|379605139|gb|EHZ69890.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47794]
gi|379606822|gb|EHZ71569.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47760]
gi|379635454|gb|EIA00013.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae England14-9]
gi|379637185|gb|EIA01743.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA05578]
gi|379639062|gb|EIA03606.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA02506]
gi|381310192|gb|EIC51025.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV36]
gi|381316062|gb|EIC56817.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 459-5]
gi|381318102|gb|EIC58827.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SV35]
gi|395574761|gb|EJG35338.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070035]
gi|395594611|gb|EJG54846.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080076]
gi|395603387|gb|EJG63523.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2071247]
gi|395607772|gb|EJG67868.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081685]
gi|395608294|gb|EJG68389.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2081074]
gi|395613315|gb|EJG73343.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082239]
gi|395613799|gb|EJG73825.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2082170]
gi|395867929|gb|EJG79049.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR48]
gi|395873095|gb|EJG84187.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52612]
gi|395874605|gb|EJG85688.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae SPAR55]
gi|395881480|gb|EJG92529.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04216]
gi|395896094|gb|EJH07062.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA58581]
gi|395900268|gb|EJH11206.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60080]
gi|395914149|gb|EJH24993.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA47562]
gi|404277569|emb|CCM08104.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae SPNA45]
gi|406369716|gb|AFS43406.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus pneumoniae gamPNI0373]
gi|444259690|gb|ELU65999.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0002]
gi|444260485|gb|ELU66793.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0006]
gi|444267300|gb|ELU73209.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0008]
gi|444271039|gb|ELU76790.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0010]
gi|444276731|gb|ELU82272.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0009]
gi|444281355|gb|ELU86678.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0199]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|417356781|ref|ZP_12132254.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353595222|gb|EHC52527.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 332
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|422862723|ref|ZP_16909355.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK408]
gi|327473931|gb|EGF19344.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK408]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 LGLNSDGHSLNSKDAEQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|422858591|ref|ZP_16905241.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1057]
gi|327459734|gb|EGF06074.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1057]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 98/240 (40%), Gaps = 53/240 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ----SIAVQLNLALLANQ------------------SAHHLKAFGI-GDVWVAVGWSSDV 109
S LN + ANQ A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLN-SKDANQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEA 239
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 240 RQMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRP 287
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 288 ENA--YKNALYVGYSTPNLPAKDM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 68 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 126
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ +I + + + ++ + KA GDV VA G+
Sbjct: 127 DELFPAILNYMGMDPRSEKAGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 186
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ VA +PK G++LW DL AIP ++ + + L P +
Sbjct: 187 SGDVFQAANRAIEAKNGVKVAYSIPKEGSNLWFDLLAIPKDAQNPDQALAFINYLLQPQV 246
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++ LV P E+ + LD I+ P +I
Sbjct: 247 IAKVSATVGYANANP--------DANAYMDQALVDNP-EIYPPQAVLDKLYISSTPSPKI 297
Query: 219 L 219
+
Sbjct: 298 M 298
>gi|398857198|ref|ZP_10612900.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241245|gb|EJN26901.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ +
Sbjct: 126 AFPYMWGSIGIGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 74 ----------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
+ +++ ++ S+ ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLSYPVNSQDKVQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLP 195
I + A A P E I PG+ P A+ +TL +P
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIP 344
>gi|417364520|ref|ZP_12137419.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353596944|gb|EHC53803.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 347
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417325284|ref|ZP_12111298.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353576540|gb|EHC38965.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 347
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|445253380|ref|ZP_21409092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444889426|gb|ELY12869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 99/253 (39%), Gaps = 64/253 (25%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 60
L++ND G A PY WGT I Y K + + I+ W L+ P+ A +
Sbjct: 113 LQKNDPG------NAHAVPYLWGTNGIGYNVEKVKAALGVDSIDSWAVLFEPQNAEKLAS 166
Query: 61 --ISMVNSPREVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGI 96
I+M++S E+I ++ L L LLA S+ ++
Sbjct: 167 CGIAMLDSADEMIPAVLNYLGLDPNSENPADYRKAEEKLLAVRPHVRYFHSSKYISDLAN 226
Query: 97 GDVWVAVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGG 149
G++ VA G+S DV A K + +PK G +LW D+ AIPA +
Sbjct: 227 GNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADA--------- 277
Query: 150 RVRGLSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNL 209
G H +I++ L+ A VI S + GEL+ + D
Sbjct: 278 ---GNVEQAHAFIDYLLRPA--------VIAAVSDYVGYANPNLKAGELMDQEVRNDP-- 324
Query: 210 IAGVPPAEILARF 222
A PP E+L R
Sbjct: 325 -AVYPPQEVLDRL 336
>gi|167855017|ref|ZP_02477791.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
gi|167853865|gb|EDS25105.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
Length = 346
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 55/242 (22%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 119 KGNKYSLPQLLGAPGIAFNTNSYKGDNFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 174
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +LA S + +F G+V V W+ V A
Sbjct: 175 LLKLGQDPNTKDPAVIKAAYEELLKLRPNVLAFSSDNPANSFISGEVEVGQLWNGSVRIA 234
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIHQWIEFCLQTAR 170
K + V +V PK G LW D AIP+ ++ +P H+ I + L
Sbjct: 235 KKEQAPVNMVFPKEGPVLWVDTLAIPSNAK-------------NPDAAHKLINYLLSAPV 281
Query: 171 ALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A E+ P ++ ALE KLP E+ T A P +E+L + ++ + +
Sbjct: 282 AEKLTLEIGYPTSNVKALE----KLPKEI--------TEDPAIYPTSEVLQKSQWQDDVG 329
Query: 230 EA 231
+A
Sbjct: 330 DA 331
>gi|417347886|ref|ZP_12126976.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417517138|ref|ZP_12179859.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|417538032|ref|ZP_12190746.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353577100|gb|EHC39369.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353652358|gb|EHC94212.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353667371|gb|EHD04907.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 339
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
1021]
gi|384528421|ref|YP_005712509.1| extracellular solute-binding protein [Sinorhizobium meliloti
BL225C]
gi|433612474|ref|YP_007189272.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium
meliloti 1021]
gi|333810597|gb|AEG03266.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti BL225C]
gi|429550664|gb|AGA05673.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
Length = 364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 38/164 (23%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIE--DWKDLWRPELAGR-----ISM 63
+ DP G A Y WGT I Y K K L E +W ++ PE+A + I +
Sbjct: 117 AQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGTDEKPNWDVIFDPEIAAKFKDCGIHL 174
Query: 64 VNSPREVIGSIAVQLNLA--------------LLAN--------QSAHHLKAFGIGDVWV 101
++SP +++ S L L LL S+ ++ A GD+ +
Sbjct: 175 LDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICL 234
Query: 102 AVGWSSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPA 138
AVG+S DV A + + V V +P+ GA +W D+ AIPA
Sbjct: 235 AVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPA 278
>gi|397693845|ref|YP_006531725.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|397330575|gb|AFO46934.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
Length = 362
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + + KA GDV VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANP--------DAKAYMDASLVNNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|296387886|ref|ZP_06877361.1| polyamine ABC transporter [Pseudomonas aeruginosa PAb1]
Length = 353
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQL----------------NLALLAN------QSAHHLKAFGIGDVW 100
+++ P+E+ G+ L L L A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQTLILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDAATQARLEPLKDLN 336
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 36/160 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP+ + PY WGT I Y K ++ + I+ W L+ PE + +SM++S
Sbjct: 118 DPQNA-HSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSQCGVSMMDSA 176
Query: 68 REVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVGW 105
EV +I + + + S+ ++ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDFKKAEAKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 106 SSDVLPAV------KHMSNVA-VVPKSGASLWADLWAIPA 138
S DV A K+ N+A +PK GA+LW DL A+PA
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|398940763|ref|ZP_10669441.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162380|gb|EJM50576.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVI-- 71
A PY WG++ I + K ++ + AP W L++PE A + IS ++SP E++
Sbjct: 126 AFPYMWGSIGIGFNPEKVKEVLGSNAPTNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 72 --------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
++ +++ ++ S+ ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQNKDQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAQEAGDKVKVDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLP 195
I + A A P E I PG+ PS A+ +TL +P
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPSQAVMATLYAIP 344
>gi|420163650|ref|ZP_14670393.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|420167416|ref|ZP_14674076.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
gi|394234073|gb|EJD79660.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|394238616|gb|EJD84078.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
Length = 357
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP + + PY +GTV I Y K K+ + W DL+ + I +V+ RE+IG
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 74 IAVQLNLAL---------LANQSAHHL--KAFGI-GDV----------WVAVGWSSDVLP 111
+L +L A + H+L + GI GD VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 112 AVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 36/164 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A Y WGT I K ++ P+ W + +PE+A + I M++S
Sbjct: 116 FDP-GNQYAVNYMWGTTGIGLNVKKVKEILGDMPLNTWDLVLKPEIASKLKACGIYMLDS 174
Query: 67 PREVIGSIAVQLNLA----------------------LLANQSAHHLKAFGIGDVWVAVG 104
P ++ + L L + S+ ++ A GD+ VAVG
Sbjct: 175 PEDLFPGVLAYLGLNPDSKRTEDLNKAGDALFRIRGNIQKFHSSEYINALANGDICVAVG 234
Query: 105 WSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+S D++ A K+ V V+P+ GA +W D +AIPA ++
Sbjct: 235 YSGDMIQAKNRAEEAKNGVEVGYVIPREGALMWFDSFAIPADAK 278
>gi|417413311|ref|ZP_12158325.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353625997|gb|EHC74643.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 348
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNKY-AMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417332548|ref|ZP_12116395.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353581346|gb|EHC42310.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 328
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|407473418|ref|YP_006787818.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
acidurici 9a]
gi|407049926|gb|AFS77971.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
acidurici 9a]
Length = 346
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ + + PY WGTV I Y K+ ++ P++ W LW + +I M+NS R+ +G
Sbjct: 119 FDPKNE-YSVPYMWGTVGILYNKNMVKE----PVDSWDILWDEKYKEQILMLNSQRDSLG 173
Query: 73 SIAVQLNLA---------------------LLANQSAHHLKAFGIGD-VWVAVGWSSDVL 110
+L + L+ + LK I + ++V WS D
Sbjct: 174 VALKKLGYSMNSTNDKELEEAKQELVKQKPLVYSYVGDELKDMMINEEAAMSVVWSGDAG 233
Query: 111 PAVKHMSNVAV-VPKSGASLWADLWAIPAASR 141
+ SN+A +PK G++ W D IP +
Sbjct: 234 YTMTENSNLAYAIPKEGSNYWFDNIVIPKTVK 265
>gi|417372044|ref|ZP_12142440.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417382044|ref|ZP_12148128.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417509588|ref|ZP_12174719.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606362|gb|EHC60607.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353616115|gb|EHC67456.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353648906|gb|EHC91680.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|168493289|ref|ZP_02717432.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC3059-06]
gi|225854833|ref|YP_002736345.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae JJA]
gi|225857021|ref|YP_002738532.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae P1031]
gi|418078826|ref|ZP_12716049.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4027-06]
gi|418080800|ref|ZP_12718012.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6735-05]
gi|418089738|ref|ZP_12726894.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43265]
gi|418105432|ref|ZP_12742489.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44500]
gi|418114912|ref|ZP_12751899.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5787-06]
gi|418117068|ref|ZP_12754038.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6963-05]
gi|418135403|ref|ZP_12772258.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11426]
gi|418182956|ref|ZP_12819516.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43380]
gi|418216791|ref|ZP_12843514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419431769|ref|ZP_13971905.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP05]
gi|419434461|ref|ZP_13974578.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40183]
gi|419440566|ref|ZP_13980614.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40410]
gi|419464571|ref|ZP_14004463.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04175]
gi|419469200|ref|ZP_14009070.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA06083]
gi|419497757|ref|ZP_14037465.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47522]
gi|421281320|ref|ZP_15732118.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04672]
gi|421309792|ref|ZP_15760418.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA62681]
gi|444410057|ref|ZP_21206610.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0076]
gi|444412226|ref|ZP_21208548.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0153]
gi|444423460|ref|ZP_21219064.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0446]
gi|183576597|gb|EDT97125.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC3059-06]
gi|225722374|gb|ACO18227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae JJA]
gi|225726064|gb|ACO21916.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae P1031]
gi|353748017|gb|EHD28673.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 4027-06]
gi|353753340|gb|EHD33964.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6735-05]
gi|353761736|gb|EHD42302.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43265]
gi|353776368|gb|EHD56844.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44500]
gi|353785977|gb|EHD66393.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 5787-06]
gi|353789429|gb|EHD69824.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 6963-05]
gi|353849097|gb|EHE29107.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA43380]
gi|353872383|gb|EHE52249.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|353901121|gb|EHE76667.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA11426]
gi|379537605|gb|EHZ02787.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA04175]
gi|379545139|gb|EHZ10280.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA06083]
gi|379575845|gb|EHZ40775.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40183]
gi|379578706|gb|EHZ43615.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40410]
gi|379600021|gb|EHZ64803.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47522]
gi|379629437|gb|EHZ94033.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae EU-NP05]
gi|395882481|gb|EJG93528.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA04672]
gi|395910379|gb|EJH21252.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA62681]
gi|444274748|gb|ELU80390.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0153]
gi|444278278|gb|ELU83739.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0076]
gi|444286888|gb|ELU91841.1| putrescine ABC transporter, periplasmic spermidine [Streptococcus
pneumoniae PNI0446]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|365848786|ref|ZP_09389257.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
gi|364569430|gb|EHM47052.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
Length = 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGKDAPVNSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|417528396|ref|ZP_12185034.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353668092|gb|EHD05386.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|422855633|ref|ZP_16902291.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1]
gi|327461294|gb|EGF07625.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDADQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|409249324|ref|YP_006885156.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416724823|ref|ZP_11845207.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|320085152|emb|CBY94939.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323243138|gb|EGA27158.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 353
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 107 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 165
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 166 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 225
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 270
>gi|399543357|ref|YP_006556665.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
gi|399158689|gb|AFP29252.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
Length = 348
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 42/164 (25%)
Query: 13 IDPRGKI-------CAAPYRWGTVVIAYKKSKFRKHNLAP--IEDWKDLWRP--ELAGRI 61
IDPR +I PY WGT+ I Y++ +L P + W DL +P EL G+I
Sbjct: 109 IDPRRRIEFEKAEDFGVPYFWGTIGIVYRR------DLVPFAVSSWMDLLQPIEELHGKI 162
Query: 62 SMVNSPREVIGS----IAVQLNL----------ALLANQ----------SAHHLKAFGIG 97
SM+ ++IG+ + LN ALL Q S + A G
Sbjct: 163 SMIGDSADMIGAALKALGYSLNSTNEDEMKDAEALLEAQAPAVNTYRYLSLNEDSALLNG 222
Query: 98 DVWVAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
V +++ ++ D ++ N+A V+PK G ++W D ++ +AS
Sbjct: 223 QVVMSMMYNGDTRMLQEYNDNIAFVLPKEGGNIWTDYLSVLSAS 266
>gi|421307103|ref|ZP_15757749.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60132]
gi|395909066|gb|EJH19943.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae GA60132]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIIYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + ++P+ L LP E + K A P E + E E
Sbjct: 289 NALQ-NAEYVGYSTPNLPAKEL--LPEETKEDK--------AFYPDVETMKHLEIYEKFD 337
>gi|417090351|ref|ZP_11955885.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis R61]
gi|353533647|gb|EHC03296.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
suis R61]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 13 IDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 64
IDPR + PY WGT+ I Y ++ P ++W+DLW E I ++
Sbjct: 117 IDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVDN----PPQEWEDLWSEEYRDNIMLI 172
Query: 65 NSPREVIG----SIAVQLNLALLA--NQSAHHL---------------KAFGIGD-VWVA 102
+ REV+G S+ LN A ++A HL K + I D +A
Sbjct: 173 DGVREVMGFGLQSLGYSLNSKNPAEIEKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAIA 232
Query: 103 VGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
V +S + + N+ VVP G++LW D IP ++
Sbjct: 233 VSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAK 272
>gi|422882171|ref|ZP_16928627.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK355]
gi|332360941|gb|EGJ38746.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK355]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDADQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|422851737|ref|ZP_16898407.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK150]
gi|325694406|gb|EGD36317.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK150]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 LGLNSDGHSLNSKDADQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|334315175|ref|YP_004547794.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti AK83]
gi|384534820|ref|YP_005718905.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|407719548|ref|YP_006839210.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
gi|418399937|ref|ZP_12973482.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|334094169|gb|AEG52180.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti AK83]
gi|336031712|gb|AEH77644.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|359506054|gb|EHK78571.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|407317780|emb|CCM66384.1| Putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
Length = 364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 38/164 (23%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIE--DWKDLWRPELAGR-----ISM 63
+ DP G A Y WGT I Y K K L E +W ++ PE+A + I +
Sbjct: 117 AQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGTDEKPNWDVIFDPEIAAKFKDCGIHL 174
Query: 64 VNSPREVIGSIAVQLNLA--------------LLAN--------QSAHHLKAFGIGDVWV 101
++SP +++ S L L LL S+ ++ A GD+ +
Sbjct: 175 LDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICL 234
Query: 102 AVGWSSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPA 138
AVG+S DV A + + V V +P+ GA +W D+ AIPA
Sbjct: 235 AVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPA 278
>gi|146305385|ref|YP_001185850.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505531|ref|ZP_15952469.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573586|gb|ABP83118.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343940|gb|EJO92312.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G + PY WGT I +K R AP++ W L+ P+ A + I++++S
Sbjct: 119 DP-GNEYSVPYLWGTNGIGLNATKARAVLGEDAPLDSWALLFEPQYAEKLAKCGIALLDS 177
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKAF----------------------GIGDVWVAVG 104
EV+ L L+ + + KAF G++ A G
Sbjct: 178 GDEVLPQTVNYLGLSPHTTKREDYDKAFEQMMKVRPYITYFHSSKFISDLANGEICAAFG 237
Query: 105 WSSDVLPAVKHMSN-------VAVVPKSGASLWADLWAIPAASR 141
+S DVL A + ++PK G ++WADL AIP ++
Sbjct: 238 YSGDVLQAADRAEEAGRSDEIIYIIPKEGTAMWADLLAIPKDAK 281
>gi|431802646|ref|YP_007229549.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430793411|gb|AGA73606.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 362
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNIDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + A + KA G+V VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPADYAKAEARLLELRPYITYFHSSKYVSDLANGNVCVAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A K+ +A +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGLKIAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P Q + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANPDAQ--------AYMDASLVNNP-EIYPPQDVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|254555449|ref|YP_003061866.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum JDM1]
gi|300766972|ref|ZP_07076885.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|380031362|ref|YP_004888353.1| spermidine/putrescine ABC transporter,substrate binding protein
[Lactobacillus plantarum WCFS1]
gi|254044376|gb|ACT61169.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum JDM1]
gi|300495510|gb|EFK30665.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|342240605|emb|CCC77839.1| spermidine/putrescine ABC transporter,substrate binding protein
[Lactobacillus plantarum WCFS1]
Length = 356
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 133 SVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQRKYHNKIMLIDSARDVMGFALASMNQ 189
Query: 81 A--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
+ LLA ++ A +K + I + +AV WS S++L H
Sbjct: 190 SMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLAGNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|387813512|ref|YP_005428994.1| putrescine ABC transporter periplasmic-binding protein
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338524|emb|CCG94571.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 368
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 39/167 (23%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-------IS 62
++DP G + PY WGT Y + + ++ + AP + W ++ PE+ G+ I+
Sbjct: 119 KVDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDTAPTDSWALVFDPEVTGKLAAGGCGIA 177
Query: 63 MVNSPREVIGSIAVQLNLALLANQ----------------------SAHHLKAFGIGDVW 100
M++S E++ + + L +N S+ ++ GD+
Sbjct: 178 MLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNITYFHSSRYIGDLANGDLC 237
Query: 101 VAVGWSSDVLPAVKHM-----SNV--AVVPKSGASLWADLWAIPAAS 140
VA G+S D+L A NV +PK GA LW D+ IPA +
Sbjct: 238 VAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|421166158|ref|ZP_15624426.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
gi|404539135|gb|EKA48640.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
Length = 354
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKIKGRVT 164
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 165 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 224
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 225 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 272
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 273 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 320
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 321 FPDAATQARLEPLKDLN 337
>gi|398887585|ref|ZP_10642244.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398192053|gb|EJM79222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWSMLFEPENIKKLHKCGVAFLDSA 179
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
E++ ++ + L LLA S+ ++ GD+ VAVG+
Sbjct: 180 DEMMPTVLNYMGLNANSTNEEDYKKATAKLLAVRPYVTYFNSSKYITDLANGDICVAVGF 239
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAAS 140
S D+ A K N+A +PK G +LW D+ AIP S
Sbjct: 240 SGDIFQARNRAKEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|329298263|ref|ZP_08255599.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Plautia stali symbiont]
Length = 369
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYTGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLP----AVKHMSNVAV---VPKSGASLWADLWAIPAASR 141
GWS D+L AVK + V + VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQSKDRAVKANNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|182416937|ref|ZP_02948321.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium butyricum 5521]
gi|237667688|ref|ZP_04527672.1| spermidine/putrescine-binding periplasmic protein [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182379235|gb|EDT76736.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium butyricum 5521]
gi|237656036|gb|EEP53592.1| spermidine/putrescine-binding periplasmic protein [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 355
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY GT+ I Y K PIE W LW E + +++ R+ +G
Sbjct: 125 FDPNNEY-SVPYMSGTIGICYNTDYVSK----PIESWTALWDTEYQKNVVLLDGVRDSLG 179
Query: 73 S------------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSD 108
+ I ++ N LLA S + G+ +++ WS +
Sbjct: 180 ATLKMLGYSLNTTDQKEINEAKDKLIELKKNGNLLAIGSDDNTDKMASGEAAISILWSGE 239
Query: 109 VLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
L N+ VVPK GA+ W D IP ++
Sbjct: 240 GLNLEAEHDNIKFVVPKEGANFWIDSLCIPKGTK 273
>gi|339998775|ref|YP_004729658.1| putrescine-binding periplasmic protein [Salmonella bongori NCTC
12419]
gi|339512136|emb|CCC29867.1| putrescine-binding periplasmic protein precursor [Salmonella
bongori NCTC 12419]
Length = 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGEDAPVNSWDLVLKPENLAKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSNANDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375118328|ref|ZP_09763495.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
Length = 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 134 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 193 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 252
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 253 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|197247643|ref|YP_002145831.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211346|gb|ACH48743.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|16764239|ref|NP_459854.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62179440|ref|YP_215857.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197362956|ref|YP_002142593.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205352128|ref|YP_002225929.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856310|ref|YP_002242961.1| putrescine transporter periplasmic binding protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|238913395|ref|ZP_04657232.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375113763|ref|ZP_09758933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444354|ref|YP_005231986.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378449260|ref|YP_005236619.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378698812|ref|YP_005180769.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983477|ref|YP_005246632.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988262|ref|YP_005251426.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|416421925|ref|ZP_11689829.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416431442|ref|ZP_11695596.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416441578|ref|ZP_11701790.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416445354|ref|ZP_11704243.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454072|ref|ZP_11710075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416459284|ref|ZP_11713793.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416467335|ref|ZP_11717352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416480988|ref|ZP_11723044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489786|ref|ZP_11726398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416500390|ref|ZP_11731461.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416505245|ref|ZP_11733679.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416523164|ref|ZP_11740911.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416530431|ref|ZP_11744957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536481|ref|ZP_11748443.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416546337|ref|ZP_11753823.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550445|ref|ZP_11755980.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416560306|ref|ZP_11761135.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416570264|ref|ZP_11765925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416578438|ref|ZP_11770558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582376|ref|ZP_11772650.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593687|ref|ZP_11780093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416599414|ref|ZP_11783648.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604916|ref|ZP_11786537.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612564|ref|ZP_11791589.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416617975|ref|ZP_11794380.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634346|ref|ZP_11802511.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416640904|ref|ZP_11805226.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416650149|ref|ZP_11810257.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416663465|ref|ZP_11816202.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669819|ref|ZP_11819662.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416676218|ref|ZP_11821740.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689904|ref|ZP_11825666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416707497|ref|ZP_11832595.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416714795|ref|ZP_11838113.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716573|ref|ZP_11838920.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416730298|ref|ZP_11848549.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740458|ref|ZP_11854414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416746455|ref|ZP_11857777.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416752325|ref|ZP_11860301.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760881|ref|ZP_11865089.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416767412|ref|ZP_11869885.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418483765|ref|ZP_13052771.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491741|ref|ZP_13058249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493962|ref|ZP_13060422.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500081|ref|ZP_13066480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418501903|ref|ZP_13068279.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509720|ref|ZP_13076012.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526741|ref|ZP_13092710.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763546|ref|ZP_13319661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765268|ref|ZP_13321358.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418769432|ref|ZP_13325462.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418773483|ref|ZP_13329467.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779533|ref|ZP_13335433.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784861|ref|ZP_13340697.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418790736|ref|ZP_13346506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791919|ref|ZP_13347670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418798868|ref|ZP_13354541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418803599|ref|ZP_13359217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419728021|ref|ZP_14254989.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419736814|ref|ZP_14263640.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739303|ref|ZP_14266052.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742482|ref|ZP_14269155.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419790942|ref|ZP_14316608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794479|ref|ZP_14320091.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358050|ref|ZP_15808357.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364722|ref|ZP_15814953.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367512|ref|ZP_15817705.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370304|ref|ZP_15820470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377749|ref|ZP_15827839.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382421|ref|ZP_15832468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386157|ref|ZP_15836172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392078|ref|ZP_15842039.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393082|ref|ZP_15843029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398990|ref|ZP_15848894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404899|ref|ZP_15854735.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408034|ref|ZP_15857840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411154|ref|ZP_15860922.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419135|ref|ZP_15868831.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421415|ref|ZP_15871083.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425409|ref|ZP_15875045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421432308|ref|ZP_15881884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434533|ref|ZP_15884082.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438876|ref|ZP_15888370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446432|ref|ZP_15895844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450803|ref|ZP_15900173.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569155|ref|ZP_16014859.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573492|ref|ZP_16019128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421580051|ref|ZP_16025612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584809|ref|ZP_16030316.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887310|ref|ZP_16318470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025028|ref|ZP_16371490.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030051|ref|ZP_16376285.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427547363|ref|ZP_18926799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427563384|ref|ZP_18931565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427582316|ref|ZP_18936321.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427604668|ref|ZP_18941164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427629463|ref|ZP_18946067.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427652696|ref|ZP_18950833.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660264|ref|ZP_18955780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665392|ref|ZP_18960538.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427744530|ref|ZP_18965557.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436637409|ref|ZP_20516058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436794612|ref|ZP_20522167.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811702|ref|ZP_20530582.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436816074|ref|ZP_20533625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839222|ref|ZP_20537542.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851669|ref|ZP_20542268.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858431|ref|ZP_20546951.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865607|ref|ZP_20551574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875219|ref|ZP_20557126.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879091|ref|ZP_20559482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436884912|ref|ZP_20562310.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896727|ref|ZP_20569483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906706|ref|ZP_20575552.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911343|ref|ZP_20577172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918580|ref|ZP_20581726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930796|ref|ZP_20589021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933035|ref|ZP_20589474.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942485|ref|ZP_20595431.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436947926|ref|ZP_20598332.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436963547|ref|ZP_20605824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436969843|ref|ZP_20608758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977547|ref|ZP_20612325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436995527|ref|ZP_20619252.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437005278|ref|ZP_20622370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437022867|ref|ZP_20628732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437032170|ref|ZP_20631814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041909|ref|ZP_20635814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437050133|ref|ZP_20640414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055320|ref|ZP_20643463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068624|ref|ZP_20650755.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077584|ref|ZP_20655483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086927|ref|ZP_20660936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088565|ref|ZP_20661602.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437112201|ref|ZP_20668584.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124140|ref|ZP_20673211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134227|ref|ZP_20678651.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437138097|ref|ZP_20680827.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147716|ref|ZP_20686998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437156152|ref|ZP_20692077.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161611|ref|ZP_20695547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437166342|ref|ZP_20697995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177620|ref|ZP_20704100.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185424|ref|ZP_20708998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437194019|ref|ZP_20710930.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437260873|ref|ZP_20717943.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267092|ref|ZP_20721058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437276451|ref|ZP_20726460.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300328|ref|ZP_20733092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437311231|ref|ZP_20735826.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437325736|ref|ZP_20740008.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336472|ref|ZP_20743079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437356934|ref|ZP_20748005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420137|ref|ZP_20754514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437448468|ref|ZP_20759210.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437467937|ref|ZP_20764579.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437489622|ref|ZP_20770407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512799|ref|ZP_20777354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437537514|ref|ZP_20781772.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437556094|ref|ZP_20784931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575498|ref|ZP_20790294.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437595047|ref|ZP_20795806.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437607023|ref|ZP_20800041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622005|ref|ZP_20804515.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437647434|ref|ZP_20809247.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437659091|ref|ZP_20812018.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437678584|ref|ZP_20817786.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437688682|ref|ZP_20819912.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437712900|ref|ZP_20827276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437732320|ref|ZP_20831575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437772380|ref|ZP_20835729.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437803977|ref|ZP_20838692.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438089680|ref|ZP_20860263.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438104700|ref|ZP_20865964.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438114131|ref|ZP_20869907.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445139775|ref|ZP_21384533.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152484|ref|ZP_21390867.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445177638|ref|ZP_21397760.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445228210|ref|ZP_21404615.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445327766|ref|ZP_21412766.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346380|ref|ZP_21418750.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445367420|ref|ZP_21425547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120916|ref|YP_007471164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|16419385|gb|AAL19813.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62127073|gb|AAX64776.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197094433|emb|CAR59949.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205271909|emb|CAR36751.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|206708113|emb|CAR32406.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|261246133|emb|CBG23936.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992638|gb|ACY87523.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157460|emb|CBW16950.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911905|dbj|BAJ35879.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|322616352|gb|EFY13261.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619602|gb|EFY16477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622702|gb|EFY19547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628614|gb|EFY25401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631551|gb|EFY28307.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637078|gb|EFY33781.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641723|gb|EFY38359.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644484|gb|EFY41024.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650055|gb|EFY46472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654152|gb|EFY50475.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658067|gb|EFY54334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663541|gb|EFY59743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670277|gb|EFY66417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671513|gb|EFY67635.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676869|gb|EFY72936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682794|gb|EFY78813.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686473|gb|EFY82455.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322713909|gb|EFZ05480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323196073|gb|EFZ81236.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196781|gb|EFZ81925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202940|gb|EFZ87974.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209702|gb|EFZ94629.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215183|gb|EFZ99928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222386|gb|EGA06764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227510|gb|EGA11670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229861|gb|EGA13984.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233086|gb|EGA17182.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240821|gb|EGA24863.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323248680|gb|EGA32608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251681|gb|EGA35548.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257331|gb|EGA41029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263906|gb|EGA47424.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267935|gb|EGA51414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271998|gb|EGA55413.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332987809|gb|AEF06792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|363550811|gb|EHL35137.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363550883|gb|EHL35208.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363556179|gb|EHL40394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363564802|gb|EHL48843.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568401|gb|EHL52381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363574981|gb|EHL58840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575548|gb|EHL59398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366060306|gb|EHN24570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060740|gb|EHN25000.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063209|gb|EHN27429.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366069548|gb|EHN33671.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366076350|gb|EHN40388.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077815|gb|EHN41824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828332|gb|EHN55219.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205349|gb|EHP18864.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|379983026|emb|CCF90743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381290488|gb|EIC31753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381299395|gb|EIC40468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381301603|gb|EIC42659.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381313777|gb|EIC54556.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|392612685|gb|EIW95154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392614781|gb|EIW97225.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733014|gb|EIZ90220.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392739728|gb|EIZ96860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392741421|gb|EIZ98526.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392752105|gb|EJA09047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392753565|gb|EJA10494.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753857|gb|EJA10778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392757049|gb|EJA13940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765510|gb|EJA22296.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392769452|gb|EJA26185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392772694|gb|EJA29394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|395982950|gb|EJH92144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986032|gb|EJH95196.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989145|gb|EJH98280.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395998026|gb|EJI07064.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395998328|gb|EJI07360.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006856|gb|EJI15817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396009758|gb|EJI18681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396014776|gb|EJI23661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019333|gb|EJI28190.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396024746|gb|EJI33531.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029164|gb|EJI37903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396029434|gb|EJI38171.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036643|gb|EJI45302.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396040730|gb|EJI49353.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046688|gb|EJI55271.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050699|gb|EJI59221.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396057879|gb|EJI66349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060284|gb|EJI68730.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062014|gb|EJI70427.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065299|gb|EJI73676.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072104|gb|EJI80419.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402520530|gb|EJW27872.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527509|gb|EJW34770.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527751|gb|EJW35011.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402530781|gb|EJW37995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414022365|gb|EKT05851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414022428|gb|EKT05913.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414023991|gb|EKT07396.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036091|gb|EKT18934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037519|gb|EKT20288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414040678|gb|EKT23286.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414050707|gb|EKT32869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414051941|gb|EKT34019.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056183|gb|EKT38021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061132|gb|EKT42575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066661|gb|EKT47180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434957552|gb|ELL51185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434962641|gb|ELL55817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964333|gb|ELL57355.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974190|gb|ELL66578.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980530|gb|ELL72451.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986971|gb|ELL78622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990583|gb|ELL82133.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434994810|gb|ELL86127.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996642|gb|ELL87958.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435007074|gb|ELL97931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013094|gb|ELM03754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015283|gb|ELM05840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016616|gb|ELM07142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025588|gb|ELM15719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435030578|gb|ELM20587.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032451|gb|ELM22395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042684|gb|ELM32401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435044090|gb|ELM33788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435048796|gb|ELM38352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056664|gb|ELM46035.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435058613|gb|ELM47934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062969|gb|ELM52141.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435070760|gb|ELM59742.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435071618|gb|ELM60558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435076125|gb|ELM64921.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435080106|gb|ELM68799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435085173|gb|ELM73727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095115|gb|ELM83452.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435095274|gb|ELM83592.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098662|gb|ELM86893.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103073|gb|ELM91176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435103288|gb|ELM91383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435116600|gb|ELN04335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435116879|gb|ELN04593.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435119706|gb|ELN07308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435120494|gb|ELN08072.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133819|gb|ELN20975.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134034|gb|ELN21178.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435136931|gb|ELN24003.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144668|gb|ELN31500.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435153000|gb|ELN39621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435155300|gb|ELN41858.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159477|gb|ELN45798.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163329|gb|ELN49465.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435173809|gb|ELN59278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176244|gb|ELN61634.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178731|gb|ELN63928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435183993|gb|ELN68939.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435192975|gb|ELN77478.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197541|gb|ELN81824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201339|gb|ELN85251.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209066|gb|ELN92444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435211472|gb|ELN94574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435215386|gb|ELN98073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435229420|gb|ELO10784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435230491|gb|ELO11797.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435231624|gb|ELO12853.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239890|gb|ELO20323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241635|gb|ELO21977.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245463|gb|ELO25550.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435251318|gb|ELO30947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435254229|gb|ELO33632.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435256225|gb|ELO35570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435270143|gb|ELO48647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435270614|gb|ELO49109.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435273279|gb|ELO51621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282427|gb|ELO60045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435287183|gb|ELO64398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435288224|gb|ELO65274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435303087|gb|ELO79005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435305634|gb|ELO81084.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316876|gb|ELO89959.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321996|gb|ELO94337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329155|gb|ELP00608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444853073|gb|ELX78145.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854275|gb|ELX79340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444855893|gb|ELX80932.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444866305|gb|ELX91038.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878046|gb|ELY02174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444880544|gb|ELY04618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444882367|gb|ELY06333.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451909920|gb|AGF81726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAVPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|283796608|ref|ZP_06345761.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
sp. M62/1]
gi|291076029|gb|EFE13393.1| ABC transporter, solute-binding protein [Clostridium sp. M62/1]
Length = 675
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 34/168 (20%)
Query: 4 YLRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
YL ++++ DP G A PY WGTV I Y + + + P W DLW P G I M
Sbjct: 430 YLEKSES--FDP-GNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILM 486
Query: 64 VNSPRE----VIGSIAVQLN------LA----LLANQSAHHLKAFGI---------GDVW 100
+S R+ + S+ +N LA LL Q ++A+ I G+
Sbjct: 487 QDSVRDAFMVALKSLGYSMNSTDEGELAQARDLLIAQKP-LVQAYVIDQVRDKMIGGEAA 545
Query: 101 VAVGWSSDVLPAVKHMS--NV-----AVVPKSGASLWADLWAIPAASR 141
V V +S ++L + ++ N+ V+P+ G ++W D W IP ++
Sbjct: 546 VGVIYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAK 593
>gi|56414033|ref|YP_151108.1| putrescine ABC transporter periplasmic protein [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|56128290|gb|AAV77796.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|422867465|ref|ZP_16914045.1| putative spermidine/putrescine ABC transporter [Enterococcus
faecalis TX1467]
gi|329577407|gb|EGG58862.1| putative spermidine/putrescine ABC transporter [Enterococcus
faecalis TX1467]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y KF I+ W DLWRP + + +++ REV+G
Sbjct: 126 FDPKNKF-SVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPSIKNNVMLIDGAREVLG 181
Query: 73 ----SIAVQLN-------------LALLANQ----SAHHLKAFGIG-DVWVAVGWS---S 107
S+ LN L L N A +K + + VAV +S +
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAA 241
Query: 108 DVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
++L +H+ V+P G++LW D +P ++
Sbjct: 242 EMLENNEHLH--YVIPSEGSNLWFDNIVMPKTAK 273
>gi|422871034|ref|ZP_16917527.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1087]
gi|328946188|gb|EGG40333.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK1087]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 LGLNSDGHSLNSKDADQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|418273943|ref|ZP_12889525.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum subsp. plantarum NC8]
gi|448820033|ref|YP_007413195.1| Spermidine/putrescine ABC transporter,substrate binding protein
[Lactobacillus plantarum ZJ316]
gi|376010649|gb|EHS83974.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum subsp. plantarum NC8]
gi|448273530|gb|AGE38049.1| Spermidine/putrescine ABC transporter,substrate binding protein
[Lactobacillus plantarum ZJ316]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 133 SVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQRKYHNKIMLIDSARDVMGFALASMNQ 189
Query: 81 A--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
+ LLA ++ A +K + I + +AV WS S++L H
Sbjct: 190 SMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLAGNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP G++LW D IP ++
Sbjct: 250 LH--YVVPSEGSNLWFDNLVIPKTAK 273
>gi|331702325|ref|YP_004399284.1| family 1 extracellular solute-binding protein [Lactobacillus
buchneri NRRL B-30929]
gi|329129668|gb|AEB74221.1| extracellular solute-binding protein family 1 [Lactobacillus
buchneri NRRL B-30929]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP+ K + PY WGT+ I Y + +E W LW + I +++S R+++G
Sbjct: 126 FDPQNK-YSIPYFWGTLGIIYNDQYVKP---GSLEHWNQLWSKKYRNDIMLIDSARDILG 181
Query: 73 SIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGWSSDVL 110
+ + ++ SA +KA G+ VAV WS +
Sbjct: 182 FSLISMGQSVNTTNSAELIKAKDKLNRLSPNVKAVVADEIKMYMAEGEAPVAVDWSGEAS 241
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
+ S++ VVP G+++W D IP ++
Sbjct: 242 EMMSQNSHLHYVVPTEGSNMWFDNLVIPKTAK 273
>gi|386319620|ref|YP_006015783.1| spermidine/putrescine-binding periplasmic protein PotD
[Staphylococcus pseudintermedius ED99]
gi|323464791|gb|ADX76944.1| spermidine/putrescine-binding periplasmic protein PotD
[Staphylococcus pseudintermedius ED99]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 82/210 (39%), Gaps = 41/210 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
R + PY +GTV I Y K K++ W L P L + +V+ RE++G
Sbjct: 129 RKNEYSMPYFFGTVGILYDKEKYKD---IDFNSWNALKDPRLKNDVLLVDGAREIMGISL 185
Query: 73 -SIAVQLNLALLAN--QSAHHLKAFG------IGD----------VWVAVGWSSDVLPAV 113
S+ LN + Q+ HLK F +GD AV WS P
Sbjct: 186 NSLGYSLNDKNPEHLKQAEQHLKTFAPNIRGVVGDEIQMMLEQHEASAAVIWSGSAAPVF 245
Query: 114 KHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
VVPK G++LW D IP ++ V G H++I F L
Sbjct: 246 HEDERFDYVVPKEGSNLWFDNMVIPKTAQ--------NVEG----AHKFINFLLD-PEVN 292
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGK 202
E + A+P+ E+ +LP E+ K
Sbjct: 293 KQNTEWVEYATPN--ETARKQLPEEIRDDK 320
>gi|152979401|ref|YP_001345030.1| extracellular solute-binding protein [Actinobacillus succinogenes
130Z]
gi|150841124|gb|ABR75095.1| extracellular solute-binding protein family 1 [Actinobacillus
succinogenes 130Z]
Length = 363
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 95/252 (37%), Gaps = 58/252 (23%)
Query: 12 EIDP--------RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
E+DP G + P G IA+ + ++ + W DLW+PE AG++ +
Sbjct: 123 ELDPDWLNKSYDEGNKYSLPQLLGAPGIAFNVNTYKGSDFT---SWGDLWKPEYAGKVQL 179
Query: 64 VNSPREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWV 101
++ REV V+L +L+ S + +F G+V +
Sbjct: 180 LDDAREVFNIALVKLGFNPNTTNPDEIKAAYEELLKLRPNVLSFNSDNPANSFIAGEVEL 239
Query: 102 AVGWSSDVLPAVKHMSNV--AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIH 159
W+ V A K N V PK G LW D AIPA ++ H
Sbjct: 240 GQLWNGSVRIAKKDAPNTIDMVFPKEGPVLWVDTLAIPANAKHPDAA------------H 287
Query: 160 QWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
+ I + L A E+ P++ KLP E+ + P++ P AE+L
Sbjct: 288 KLINYLLSEKVAEKLTLEI---GYPTSNLKAKAKLPAEITQ-DPAI-------YPAAEVL 336
Query: 220 ARFEFLEPLSEA 231
+ + + EA
Sbjct: 337 QNAHWQDDVGEA 348
>gi|440764387|ref|ZP_20943415.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440769465|ref|ZP_20948423.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440770940|ref|ZP_20949868.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436414553|gb|ELP12481.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436416537|gb|ELP14442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436423512|gb|ELP21323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|398867950|ref|ZP_10623384.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398235202|gb|EJN21041.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGFNPQKVKEVLGTNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAH----------------------HLKAFGIGDVWVAVGWSSDVLP 111
L + AH ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKAHIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAEEAGDKVKIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLPGE 197
I + A A P E I PG+ P A+ +TL +P +
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAIPDQ 346
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 34/162 (20%)
Query: 11 GEIDP--------RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 62
G +DP RG PY WGTV + K + +++ I+ WKDL RPE GR+
Sbjct: 105 GNLDPASLNQPFDRGNALTIPYMWGTVGLLVNK---KAVDVSTIKSWKDLARPEFKGRVL 161
Query: 63 MVNSPREVIG------------------SIAVQLNLALLANQSAHHL----KAFGIGDVW 100
+ + R+ G A + AL + + +AF +V
Sbjct: 162 LSDDLRDTFGVGLKACGYSINSTNPDEIKAAYEWLKALKPSVRVFDVTATKQAFISEEVV 221
Query: 101 VAVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ W+ D A++ ++ +VP+ G +W D +AIPA +
Sbjct: 222 AGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE 263
>gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 61/246 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDV------LPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP 156
GW+ DV K+ NV+ +PK GA + D++A+PA ++ + +
Sbjct: 243 GWAGDVWQVANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEA---------- 292
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
+Q++ + ++ +V A ST +L E ++ P++ PPA
Sbjct: 293 --YQFLNYLMRPDVIAKISDQVFYANGNKA--ST--QLVSETIRNNPAI-------YPPA 339
Query: 217 EILARF 222
++ A+
Sbjct: 340 DVFAKL 345
>gi|383310635|ref|YP_005363445.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
gi|380871907|gb|AFF24274.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
Length = 348
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 55/242 (22%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 121 KGNKYSLPQLLGAPGIAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 176
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V V W+ V A
Sbjct: 177 LLKLGQDPNTTDPAIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQLWNGSVRIA 236
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIHQWIEFCLQTAR 170
K + + +V PK G LW D AIPA S+ +P H+ I + L
Sbjct: 237 KKEQAPLNMVFPKEGPVLWVDTLAIPANSK-------------NPDAAHKLINYLLSAKV 283
Query: 171 ALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A +E+ P ++ ALE LP E+ T A P AEIL + + +
Sbjct: 284 AAQLAEEIGYPTSNLKALEL----LPSEV--------TQDPAVYPTAEILQNSHWQDDVG 331
Query: 230 EA 231
+A
Sbjct: 332 DA 333
>gi|419493529|ref|ZP_14033255.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47210]
gi|379593704|gb|EHZ58516.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47210]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKF-AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEGFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|355640046|ref|ZP_09051536.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
gi|354831566|gb|EHF15578.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
Length = 353
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 10 AGEID---PRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 62
AG +D +G + PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 63 MVNSPREVIGSIAVQLN--------------LALL--------ANQSAHHLKAFGIGDVW 100
+++ P+E+ G+ L AL+ A S+ ++K +G++W
Sbjct: 164 VMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELTLGNIW 223
Query: 101 VAVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRG 153
VA G+SSD+ A +P+ GA L D I S+
Sbjct: 224 VAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSK------------ 271
Query: 154 LSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAG 212
+P L +++I+F L A ++ G +P+A + +P + T L A
Sbjct: 272 -NPDLAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFI---------RPEIKT-LAAL 319
Query: 213 VPPAEILARFEFLEPLS 229
P A AR E L+ L+
Sbjct: 320 FPDAATQARLEPLKDLN 336
>gi|418808399|ref|ZP_13363954.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812556|ref|ZP_13368079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815809|ref|ZP_13371304.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820021|ref|ZP_13375456.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833304|ref|ZP_13388234.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835228|ref|ZP_13390124.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842143|ref|ZP_13396956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418843135|ref|ZP_13397934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850066|ref|ZP_13404785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418857148|ref|ZP_13411778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418861856|ref|ZP_13416406.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418869018|ref|ZP_13423459.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392775976|gb|EJA32666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392776587|gb|EJA33274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392791176|gb|EJA47666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392793037|gb|EJA49482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795876|gb|EJA52227.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392804046|gb|EJA60223.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392807468|gb|EJA63539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392817273|gb|EJA73188.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392819272|gb|EJA75144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392835358|gb|EJA90955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392837095|gb|EJA92666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392837708|gb|EJA93278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|225420268|ref|ZP_03762571.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme
DSM 15981]
gi|225041085|gb|EEG51331.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme
DSM 15981]
Length = 374
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 34/161 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP K + PY WGTV I Y K + + + W DLW L+G I M NS R+
Sbjct: 134 DFDPENKY-SVPYCWGTVGILYNKQRLEELGVPAPTKWADLWDERLSGEILMQNSVRDAF 192
Query: 72 -------GSIAVQLNLALLANQSAHHL--------KAFGIGDV---------WVAVGWSS 107
G N A LA A L +A+ I V V V +S
Sbjct: 193 MVALKSKGYSLNSTNEAELA--EARDLLIAQKPLVQAYVIDQVRDKMINAEAAVGVIYSG 250
Query: 108 DVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
++L + +++ V+P+ G +LW D W IPA +
Sbjct: 251 EMLYIQEQAADLGLDYDLEYVIPEEGTNLWLDSWVIPANAE 291
>gi|161614859|ref|YP_001588824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194451476|ref|YP_002044907.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194468593|ref|ZP_03074577.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736529|ref|YP_002113970.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195874047|ref|ZP_02700356.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197264414|ref|ZP_03164488.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197300890|ref|ZP_02661879.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198245718|ref|YP_002214842.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389573|ref|ZP_03216184.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930077|ref|ZP_03221098.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357766|ref|ZP_02573227.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358380|ref|ZP_02655841.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205358904|ref|ZP_02665689.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359760|ref|ZP_02831960.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360691|ref|ZP_02685577.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|374981583|ref|ZP_09722907.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|375000630|ref|ZP_09724970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|375122921|ref|ZP_09768085.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|379700083|ref|YP_005241811.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383495658|ref|YP_005396347.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386590782|ref|YP_006087182.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|417473704|ref|ZP_12169030.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|161364223|gb|ABX67991.1| hypothetical protein SPAB_02612 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409780|gb|ACF69999.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454957|gb|EDX43796.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712031|gb|ACF91252.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630932|gb|EDX49518.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197242669|gb|EDY25289.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290225|gb|EDY29582.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940234|gb|ACH77567.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602018|gb|EDZ00564.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321071|gb|EDZ06272.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205329670|gb|EDZ16434.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334766|gb|EDZ21530.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205340175|gb|EDZ26939.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343115|gb|EDZ29879.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347834|gb|EDZ34465.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|321223239|gb|EFX48308.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323129182|gb|ADX16612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326627171|gb|EGE33514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|353075318|gb|EHB41078.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353650107|gb|EHC92566.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|380462479|gb|AFD57882.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|383797826|gb|AFH44908.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
Length = 371
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 36/160 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 67
DP G + PY WGT I Y +K ++ + I+ W L+ PE ++S ++SP
Sbjct: 117 DP-GNKHSVPYLWGTNGIGYNVAKVKQVLGVDRIDSWAVLFEPENIKKLSACGVAFMDSP 175
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+I S+ L L + A + KA G++ VA G+
Sbjct: 176 DEMIPSVLNYLGLDPNSTNPADYPKAEAKLAAVRPYVTYFHSSKYISDLANGNICVAFGY 235
Query: 106 SSDVLPAV------KHMSNVA-VVPKSGASLWADLWAIPA 138
S DV A K+ +A +PK GA+LW DL AIP+
Sbjct: 236 SGDVFQAAARAREAKNGIEIAYAIPKEGANLWFDLMAIPS 275
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 35/149 (23%)
Query: 24 YRWGTVVIAYK-KSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSIAVQ 77
Y WGT I Y ++ ++ + P++ W+ ++ PE+ + I M+++P E+I +
Sbjct: 133 YMWGTTGIGYNVEAAAKRLDGKPVDSWEIIFNPEILAKFQDCGIHMLDAPTELIPAALNH 192
Query: 78 LNLA--------------LLAN--------QSAHHLKAFGIGDVWVAVGWSSDVLPAVKH 115
L L LL S+ ++ A GD+ +A+GWS DV A
Sbjct: 193 LGLNPDSHDKAEIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSGDVFQARDR 252
Query: 116 MSNV-------AVVPKSGASLWADLWAIP 137
+ ++PK GA +W D AIP
Sbjct: 253 AAEADNGVTVNYIIPKEGALMWFDQMAIP 281
>gi|325272990|ref|ZP_08139306.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324101884|gb|EGB99414.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + Q A + KA G++ VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEQPADYAKAEARLLELRPYITYFHSSKYVSDLANGNICVAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + +++ LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANP--------DAKAYMDAALVDNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|169833734|ref|YP_001694820.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Hungary19A-6]
gi|421289972|ref|ZP_15740723.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA54354]
gi|421305291|ref|ZP_15755947.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA62331]
gi|168996236|gb|ACA36848.1| ABC transporter substrate-binding protein - spermidine/putrescine
transport [Streptococcus pneumoniae Hungary19A-6]
gi|395889213|gb|EJH00224.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA54354]
gi|395905953|gb|EJH16858.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA62331]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|113461303|ref|YP_719372.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823346|gb|ABI25435.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++++ + W DLW+PE AG++ +++ REV +IA
Sbjct: 134 KGNKYSLPQLLGAPGIAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVF-NIA 189
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V + W+ V A
Sbjct: 190 LLKLGQDPNTQDPKIIEQAYEELLKLRPNVLSFNSDNPANSFISGEVSIGQLWNGSVRIA 249
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + + +V PK G LW D AIP+ S+
Sbjct: 250 KKEKAPLDMVFPKEGPVLWVDTLAIPSTSK 279
>gi|26989866|ref|NP_745291.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24984773|gb|AAN68755.1|AE016507_6 periplasmic polyamine-binding protein, putative [Pseudomonas putida
KT2440]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + + KA GDV +A G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANP--------DAKAYMDASLVNNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|418853425|ref|ZP_13408114.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826686|gb|EJA82407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCDVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DPR + + PY WG+ I + + A I W DLW P+ G++ + + REV
Sbjct: 116 DPRNE-YSIPYLWGSTGIGVNAKEI---DPATITAWADLWDPKWEGKLLLTDDVREVF-H 170
Query: 74 IAVQLNLALLANQSAHHLKA-----------------------FGIGDVWVAVGWSSDVL 110
+A++ N + + +KA F GDV + + WS +V+
Sbjct: 171 MALKKNGFSTNSTNPDEIKAAYEDLQKLMPNVLVFNADAPREPFLAGDVNLGMIWSGEVV 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
A + ++ + PK GA W D +AIPA +
Sbjct: 231 MAQEENPDIQYIFPKEGAGFWVDSFAIPAGAE 262
>gi|418510965|ref|ZP_13077235.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085214|gb|EHN49104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|254469276|ref|ZP_05082681.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
gi|211961111|gb|EEA96306.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
Length = 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 36/159 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYK-KSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + Y WGT I Y ++ ++ + P++ W+ ++ P++ + I M+++P
Sbjct: 124 DP-GNDYSINYMWGTTGIGYNVEAAAKRLDGKPVDSWEIIFNPDILAKFQDCGIHMLDAP 182
Query: 68 REVIGSIAVQLNLA--------------LLAN--------QSAHHLKAFGIGDVWVAVGW 105
E+I + L L LL S+ ++ A GD+ +A+GW
Sbjct: 183 TELIPAALNHLGLNPDSHDKADIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGW 242
Query: 106 SSDVLPAVKHMSNV-------AVVPKSGASLWADLWAIP 137
S DV A + ++PK GA +W D AIP
Sbjct: 243 SGDVFQARDRAAEADNGVTVNYIIPKEGALMWFDQMAIP 281
>gi|194443308|ref|YP_002040117.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194401971|gb|ACF62193.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 371
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|170717837|ref|YP_001784897.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825966|gb|ACA31337.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ ++++ + W DLW+PE AG++ +++ REV +IA
Sbjct: 134 KGNKYSLPQLLGAPGIAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVF-NIA 189
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +L+ S + +F G+V + W+ V A
Sbjct: 190 LLKLGQDPNTQDPKIIEQAYEELLKLRPNVLSFNSDNPANSFISGEVSIGQLWNGSVRIA 249
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + + +V PK G LW D AIP+ S+
Sbjct: 250 KKEKAPLDMVFPKEGPVLWVDTLAIPSTSK 279
>gi|331002938|ref|ZP_08326451.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413231|gb|EGG92605.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 34/161 (21%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 69
A DP K AAPY WGTV I Y S I W DLW P+ G I M +S R+
Sbjct: 124 AKSFDPENK-YAAPYTWGTVGILYNTSMIDDE----ITSWGDLWNPKYQGNILMQDSVRD 178
Query: 70 --VIGSIAVQLNLALLANQSAHHLK-----------AFGI---------GDVWVAVGWSS 107
++G + ++ +K A+ + G+ + V +S
Sbjct: 179 AFMVGEKLLGYSINTTDKAELEKVKEKLIEQKPLVQAYVVDQVRDKMIGGEAAIGVIYSG 238
Query: 108 DVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
++L ++ V+PK G ++W D W IP ++
Sbjct: 239 EMLYVQNEVAKSGEDFELKYVIPKEGTNVWMDAWVIPKNAK 279
>gi|441502615|ref|ZP_20984625.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Photobacterium sp. AK15]
gi|441429793|gb|ELR67245.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Photobacterium sp. AK15]
Length = 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
E DP+ + PY WG I+Y + ++ WKDLW + A ++ +++ R+V
Sbjct: 116 EFDPKND-YSLPYVWGVTGISYNSDIIKSEQVSS---WKDLWNKDFALQVMLLDDVRDVF 171
Query: 72 G--------SI----------AVQLNLAL-----LANQSAHHLKAFGIGDVWVAVGWSSD 108
G SI A + L L + N A H+ + G+ V + W+ +
Sbjct: 172 GMALKAQGHSINTINESEIKQAYEYLLKLRPNIVVYNSDAPHV-PYVTGEANVGMQWNGN 230
Query: 109 VLPAVKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQ 167
A + M+ + V P G+ LW D + IPA S E K L H++I+F +
Sbjct: 231 AYLAKQEMNELEFVYPSEGSILWMDNFIIPAGS--ENKD----------LAHKFIDFIYR 278
>gi|422854149|ref|ZP_16900813.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK160]
gi|325696663|gb|EGD38552.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK160]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------------SIAVQLNLALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
AV L N A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDTNQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEIQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|116494513|ref|YP_806247.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei ATCC 334]
gi|116104663|gb|ABJ69805.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei ATCC 334]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 53/244 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTAR 170
KH+ VVP+ G++LW D IP ++ + I+ ++ F ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK--------HFKA----IYAFLNFMMEPKN 290
Query: 171 ALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT----NLIAGVPPAEI-LARF 222
A E + A+P+A L LP + + P +T + + +PPA++ L
Sbjct: 291 AAQ-NAEYVGYATPNAAAKKL--LPNSVQNDRQFYPDDETMKHLEIYSDLPPAKVGLYND 347
Query: 223 EFLE 226
FLE
Sbjct: 348 LFLE 351
>gi|261213133|ref|ZP_05927417.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
gi|260838198|gb|EEX64875.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
Length = 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 57/247 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG- 72
DP+ K + PY WG + Y + I W DLW + ++ +++ R+V G
Sbjct: 117 DPQNK-YSLPYIWGITGLYYNSATLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFGM 171
Query: 73 ----------------------SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVL 110
S+ N LL N A H+ + G+ + + W+ +
Sbjct: 172 ALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHV-PYVSGEATLGMQWNGNAY 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
M + V+P+ GA LW D + IP+ S PL H++I F
Sbjct: 231 QGQVEMPELKFVMPEEGAVLWMDNFTIPSGST------------NIPLAHKFINFMY--- 275
Query: 170 RALPFKQ-EVIPG-ASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEP 227
LP Q E++ SA + LP E L+ P++ P E + + EF+
Sbjct: 276 --LPENQAEIVKSLGYASATKGGRAMLPAE-LRDNPTI-------FPSDEDMKKGEFIND 325
Query: 228 LSEATLS 234
+ TL+
Sbjct: 326 VGSETLA 332
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P EV ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
+ K +V+ G S + VK L+ + + N+ PPA++ A+
Sbjct: 299 M--------KPDVMAGISNYVYYANAVKDSTPLVNAEVRENPNVY---PPADLRAKL 344
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P EV ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
+ K +V+ G S + VK L+ + + N+ PPA++ A+
Sbjct: 299 M--------KPDVMAGISNYVYYANAVKDSTPLVNAEVRENPNVY---PPADLRAKL 344
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNKY-AMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 35/161 (21%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 65
E + G A PY WGT I Y +K ++ + I+ W L+ P+ + +S ++
Sbjct: 117 ETNDPGNQYAVPYLWGTNGIGYNVAKVKEVLGVDKIDSWAVLFEPQNMKKLASCGVSFMD 176
Query: 66 SPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAV 103
S EVI S+ L L + + + KA G++ VA
Sbjct: 177 SADEVIPSVLNYLGLDPNSQSADDYAKAEAKLMEVRPYISYFHSSKYISDLANGNICVAF 236
Query: 104 GWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIP 137
G+S DVL A + +PK GA+LW D+ AIP
Sbjct: 237 GYSGDVLQAADRAAEAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|299821487|ref|ZP_07053375.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Listeria grayi DSM 20601]
gi|299817152|gb|EFI84388.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Listeria grayi DSM 20601]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 47/209 (22%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG----SIA 75
+ PY WGT+ + Y K F + + W LW +LA +I +++ REV+G S+
Sbjct: 132 YSMPYFWGTLGVIYNKKMFPDKDFS---HWDTLWDKDLANQILLIDGAREVMGLGLNSMG 188
Query: 76 VQLNLA-----LLANQSAHHL----KAFGIGD----------VWVAVGWS---SDVLPAV 113
+N L A HL KA +GD VAV +S S++L
Sbjct: 189 KSVNDTNKKDLLAARNKLQHLMPNVKAV-VGDEIKLLMADNEAGVAVTFSGEASEMLDEN 247
Query: 114 KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALP 173
K + V+P G++LW D IP ++ V G H +I F L A
Sbjct: 248 KDLE--YVIPTDGSNLWFDNMVIPKTAK--------NVEG----AHTFINFMLDPKNAAQ 293
Query: 174 FKQEVIPGASPSALESTLVKLPGELLKGK 202
E I A+P+ +L LP E+ K
Sbjct: 294 -NAEYIGYATPNKKAVSL--LPKEIANDK 319
>gi|417885902|ref|ZP_12530051.1| putative spermidine/putrescine ABC transporter [Lactobacillus oris
F0423]
gi|341594106|gb|EGS36909.1| putative spermidine/putrescine ABC transporter [Lactobacillus oris
F0423]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 51/242 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
RG + PY WGT+ I Y K R + ++ W LW P L + +++S R+V
Sbjct: 127 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 183
Query: 73 -SIAVQLNLALLA--NQSAHHLKAFG------IGD----------VWVAVGWSSDV--LP 111
S +N A ++ HLK + D V V +S D +
Sbjct: 184 ISQGQSVNTTSYAKLKKAQDHLKTLTPNVKAIVADEMKMYMEQDEAAVGVTYSGDAREMI 243
Query: 112 AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+V H + VVP G+++W D IP R + +I F L+ A A
Sbjct: 244 SVNHHLHY-VVPSEGSNIWFDNMVIP------------RAAKNKAAAYAFINFMLEPANA 290
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
E + A+P+A + +LP + + A PPA+ + + L
Sbjct: 291 AQ-NAEYVGYATPNA--AARRRLPKRVTADR--------AFYPPAKTMTHLQVYRDLPLK 339
Query: 232 TL 233
TL
Sbjct: 340 TL 341
>gi|319946702|ref|ZP_08020936.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus australis
ATCC 700641]
gi|417920882|ref|ZP_12564381.1| ABC transporter, solute-binding protein [Streptococcus australis
ATCC 700641]
gi|319746750|gb|EFV99009.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus australis
ATCC 700641]
gi|342828006|gb|EGU62386.1| ABC transporter, solute-binding protein [Streptococcus australis
ATCC 700641]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP + + PY WGT+ I Y K AP E W+DLWRPE I M + REV+
Sbjct: 125 DFDPDNQ-YSVPYFWGTLGIIYNSKMVDK---AP-EHWEDLWRPEYKNDIMMYDGAREVM 179
Query: 72 G----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWS--- 106
G S+ LN L+ N A +K + I + + V +S
Sbjct: 180 GIGLNSLGYSLNSKDPQQLQESVDKLYTLMPNIKALVADEMKGYMIQNNAAIGVTFSGEA 239
Query: 107 SDVLPAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
S +L A + + VVP ++LW D IP +
Sbjct: 240 SQMLDANEDLR--YVVPSEASNLWFDNIVIPKTVK 272
>gi|149019339|ref|ZP_01834701.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP23-BS72]
gi|418103054|ref|ZP_12740128.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP070]
gi|419475715|ref|ZP_14015555.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14688]
gi|419486871|ref|ZP_14026635.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44128]
gi|421209178|ref|ZP_15666192.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070005]
gi|421225224|ref|ZP_15681963.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070768]
gi|421240869|ref|ZP_15697414.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080913]
gi|147931209|gb|EDK82188.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae SP23-BS72]
gi|353775687|gb|EHD56167.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP070]
gi|379561260|gb|EHZ26281.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA14688]
gi|379586580|gb|EHZ51431.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA44128]
gi|395573887|gb|EJG34473.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070005]
gi|395589276|gb|EJG49595.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070768]
gi|395607247|gb|EJG67344.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2080913]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 92/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLDYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + ++P+ L LP E + K A P E + E E
Sbjct: 289 NALQ-NAEYVGYSTPNLPAKEL--LPEETKEDK--------AFYPDVETMKHLEVYEKFD 337
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 37/160 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A Y WGT I Y + R+ A + W + P A + I M++S
Sbjct: 149 DP-GNTYAVDYMWGTTGIGYNVAAVRERLGANAALNSWTVVLNPASANKLKDCGIMMLDS 207
Query: 67 PREVIGSIAVQL----------NLALLAN------------QSAHHLKAFGIGDVWVAVG 104
P ++I S+ +L L+ + ++ +++A GD+ VAVG
Sbjct: 208 PEDLIPSMLPVFGAKADSKRWDDLTLVTDALYKVRGSVRKFHASEYIQALANGDICVAVG 267
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIP 137
+S DV+ A + VVPK GA +W D +AIP
Sbjct: 268 YSGDVMQAKRRAEEAKNGIEIAYVVPKEGALMWFDTFAIP 307
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P EV ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
L K +V+ G S + VK L+ + N+ PPA++ A+
Sbjct: 299 L--------KPDVMAGISNFVYYANAVKDSTPLVNADIRNNPNVY---PPADLSAKL 344
>gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174]
gi|149831651|gb|EDM86738.1| ABC transporter, solute-binding protein [Ruminococcus obeum ATCC
29174]
Length = 571
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP K + PY WGTV I Y K + P++ W LW P+ I M +S R+
Sbjct: 341 QFDPENK-YSVPYCWGTVGILYNKMMVDE----PVDSWSILWDPKYKDNILMQDSVRDAF 395
Query: 72 GSIAVQLNLAL-------------LANQSAHHLKAFGIGDV---------WVAVGWSSDV 109
G L +L L + ++A+ I V + V +S +
Sbjct: 396 GVTLKYLGYSLNSIDLDELTEAKNLLIEQKPLVQAYVIDQVRDKMIGNEAALGVIYSGEA 455
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIP 137
+ K N+ V+PK G+++W D W IP
Sbjct: 456 IYTQKENPNLEYVIPKEGSNIWIDSWVIP 484
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|398954989|ref|ZP_10676221.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151733|gb|EJM40272.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLHKCGVAFLDSA 179
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
E++ ++ + L LLA S+ ++ GD+ VAVG+
Sbjct: 180 DEMMPTVLNYMGLNANSTNEEDYKKATAKLLAVRPYVTYFNSSKYITDLANGDICVAVGF 239
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAAS 140
S D+ A K N+A +PK G +LW D+ AIP S
Sbjct: 240 SGDIFQARNRAQEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|418076579|ref|ZP_12713814.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47502]
gi|353748282|gb|EHD28935.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47502]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPGNKF-SIPYFWGTLGIVYNETMVDE---AP-EYWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|386012138|ref|YP_005930415.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
gi|313498844|gb|ADR60210.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 45/241 (18%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
E+ ++ L + + + + KA GDV +A G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236
Query: 106 SSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLI 158
S DV A V+ + V V +PK G++LW DL AIP + + + L P +
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKV 296
Query: 159 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEI 218
+ + A A P + + ++++LV P E+ + LD I+ P +I
Sbjct: 297 IAKVSATVGYANANP--------DAKAYMDASLVNNP-EIYPPQEVLDKLYISSTPSPKI 347
Query: 219 L 219
+
Sbjct: 348 M 348
>gi|418087070|ref|ZP_12724240.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47033]
gi|418202613|ref|ZP_12839042.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52306]
gi|421285322|ref|ZP_15736099.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA60190]
gi|353759331|gb|EHD39917.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA47033]
gi|353867170|gb|EHE47065.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA52306]
gi|395887301|gb|EJG98316.1| spermidine/putrescine extracellular binding protein [Streptococcus
pneumoniae GA60190]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPGNKF-SIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMIFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I +V + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|417989189|ref|ZP_12629703.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
A2-362]
gi|410539285|gb|EKQ13821.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
A2-362]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|386288729|ref|ZP_10065869.1| polyamine ABC transporter [gamma proteobacterium BDW918]
gi|385278284|gb|EIF42256.1| polyamine ABC transporter [gamma proteobacterium BDW918]
Length = 352
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 49/192 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPRE 69
DP G + + PY + T +I Y ++K + + P DW ++ P ++ G++++++ E
Sbjct: 112 DP-GNVYSLPYAFTTTLIGYNENKITELGIDP-ADWSIIFDPAVLAKIKGKVTVMDDAEE 169
Query: 70 VIGSIAVQLNLAL----------------------LANQSAHHLKAFGIGDVWVAVGWSS 107
+ G+ L ++ A S+ ++K +G++WVA G+SS
Sbjct: 170 LFGAALKYLGYSINDTNEKHLKEAQAVILKAKPYWAAFNSSSYIKELTVGNIWVAHGYSS 229
Query: 108 DVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIH 159
D+ A ++ V+PK GA L D IP +R +P L H
Sbjct: 230 DMFQARADAADAGRDFTVNFVLPKQGAVLALDNMVIPKKAR-------------NPELAH 276
Query: 160 QWIEFCLQTARA 171
+I F + A
Sbjct: 277 MFINFMMDPQNA 288
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSAKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|422884309|ref|ZP_16930758.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK49]
gi|332360324|gb|EGJ38136.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK49]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------------SIAVQLNLALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
AV L N A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDDNQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEVQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|445060021|ref|YP_007385425.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus warneri SG1]
gi|443426078|gb|AGC90981.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus warneri SG1]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY +GTV I Y K K+ + W+DL++ + ++ +V+ RE+IG
Sbjct: 128 RHNQYSLPYFFGTVGILYNKDKYPNESF---NSWQDLYKSKYKNQVLLVDGAREIIGLGL 184
Query: 76 VQLNLAL---------LANQSAHHL--KAFG-IGDVW----------VAVGWSSDVLPAV 113
+L +L A HHL + G +GD +AV WS P V
Sbjct: 185 NKLGYSLNDKNPQHIKKAESDLHHLAPQVRGVVGDEITMMLEQNEGSIAVVWSGVAAPLV 244
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ V+PK G++LW D IP ++
Sbjct: 245 QDSDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|378955758|ref|YP_005213245.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357206369|gb|AET54415.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
Length = 371
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLRLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|389684610|ref|ZP_10175938.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
gi|388551833|gb|EIM15098.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
Length = 362
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 41/169 (24%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR--- 60
L++ND G + PY WGT I Y K ++ + I+ W + PE +
Sbjct: 114 LKQNDPGNQ------YSVPYLWGTNGIGYNVDKVKQVLGVDKIDSWAVFFEPENLKKLSQ 167
Query: 61 --ISMVNSPREVIGSIAVQLNLALLANQSAHHLKA----------------------FGI 96
+SM++SP EV ++ L L + A + KA
Sbjct: 168 CGVSMMDSPDEVFPAMLNYLGLDPRSENPADYKKAEAKLLAIRPYITYFHSSKYVSDLAN 227
Query: 97 GDVWVAVGWSSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPA 138
G++ +A G+S DV A K+ +A +PK G++LW DL AIPA
Sbjct: 228 GNICLAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|191637951|ref|YP_001987117.1| Spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus casei BL23]
gi|227535515|ref|ZP_03965564.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|385819695|ref|YP_005856082.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei LC2W]
gi|385822852|ref|YP_005859194.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei BD-II]
gi|409996811|ref|YP_006751212.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei W56]
gi|417983085|ref|ZP_12623727.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
21/1]
gi|417995787|ref|ZP_12636074.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
M36]
gi|417998724|ref|ZP_12638939.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
T71499]
gi|418001619|ref|ZP_12641758.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UCD174]
gi|418007615|ref|ZP_12647494.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW4]
gi|418010422|ref|ZP_12650199.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lc-10]
gi|418013381|ref|ZP_12653025.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lpc-37]
gi|190712253|emb|CAQ66259.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus casei BL23]
gi|227186837|gb|EEI66904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, substrate binding protein [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|327382022|gb|AEA53498.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei LC2W]
gi|327385179|gb|AEA56653.1| Spermidine/putrescine-binding periplasmic protein PotD
[Lactobacillus casei BD-II]
gi|406357823|emb|CCK22093.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei W56]
gi|410528866|gb|EKQ03704.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
21/1]
gi|410536491|gb|EKQ11084.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
M36]
gi|410540328|gb|EKQ14843.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
T71499]
gi|410546213|gb|EKQ20477.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UCD174]
gi|410548530|gb|EKQ22727.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
UW4]
gi|410553911|gb|EKQ27899.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lc-10]
gi|410555907|gb|EKQ29838.1| periplasmic-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
Lpc-37]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|157146493|ref|YP_001453812.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter koseri ATCC BAA-895]
gi|157083698|gb|ABV13376.1| hypothetical protein CKO_02253 [Citrobacter koseri ATCC BAA-895]
Length = 370
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNKY-AMPYMWATTGIGYNIDKVKAVLGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|398838150|ref|ZP_10595432.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116712|gb|EJM06470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ +
Sbjct: 126 AFPYMWGSIGIGYNPAKVKEVLGTNAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 74 ----------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
+ +++ ++ S+ ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLP 195
+ + A A P E I PG+ P A+ +TL +P
Sbjct: 306 SVGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIP 344
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|339641621|ref|ZP_08663065.1| putative spermidine/putrescine ABC transporter protein
[Streptococcus sp. oral taxon 056 str. F0418]
gi|339454890|gb|EGP67505.1| putative spermidine/putrescine ABC transporter protein
[Streptococcus sp. oral taxon 056 str. F0418]
Length = 356
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 30/153 (19%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLW+PE I +++ REV+G
Sbjct: 126 FDP-GNQYSVPYFWGTLGIVYNEKLISK---AP-EHWDDLWKPEYKNSIMLIDGAREVMG 180
Query: 73 SIAVQLNLALLANQSAHHL----------------------KAFGI-GDVWVAVGWSSDV 109
L L +++A+HL K + I + + V +S +
Sbjct: 181 IGLNSLGYGL-NDKNANHLQEAVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEA 239
Query: 110 LPAVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 240 RQMLEKNENLRYVVPSEASNLWFDNIVIPKTVK 272
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P EV ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
L K +V+ G S + VK L+ + N+ PPA++ A+
Sbjct: 299 L--------KPDVMAGISNFVYYANAVKDSTPLVNADIRNNPNVY---PPADLRAKL 344
>gi|417642795|ref|ZP_12292881.1| putative spermidine/putrescine ABC transporter [Staphylococcus
warneri VCU121]
gi|330686442|gb|EGG98039.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU121]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY +GTV I Y K K+ + W+DL++ + ++ +V+ RE+IG
Sbjct: 128 RHNQYSLPYFFGTVGILYNKDKYPNESF---NSWQDLYKSKYKNQVLLVDGAREIIGLGL 184
Query: 76 VQLNLAL---------LANQSAHHL--KAFG-IGDVW----------VAVGWSSDVLPAV 113
+L +L A HHL + G +GD +AV WS P V
Sbjct: 185 NKLGYSLNDKNPQHIKKAESDLHHLAPQVRGVVGDEITMMLEQNEGSIAVVWSGVAAPLV 244
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ V+PK G++LW D IP ++
Sbjct: 245 QDSDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 37/158 (23%)
Query: 21 AAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY W T VI Y K ++ AP W + + E + +S +++P E+ +
Sbjct: 139 AIPYLWNTTVIGYNVEKIKEALGEDAPTNSWDLVLKAENLAKLKNCGVSFLDAPSEIFAT 198
Query: 74 I-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVL 110
+ A +L L L N S+ ++ GD+ VAVGW+ D++
Sbjct: 199 VLHYLGKDANSQLASDYTGSATELLLTLRPNIRYFHSSKYINDLANGDICVAVGWNGDIV 258
Query: 111 PAVKHMS------NVAV-VPKSGASLWADLWAIPAASR 141
A + N+A +PK GA + D++A+PA ++
Sbjct: 259 QAANRIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
Length = 341
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGTV I Y K+K ++ ++ W LW + I M+NS R+ +
Sbjct: 113 DYDPKNEYTV-PYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTL 167
Query: 72 GSIAVQLNLALLANQSAHHLK-------------AFGIGDVW---------VAVGWSSDV 109
G +L ++ + A K A+ + + +AV +S D
Sbjct: 168 GVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDA 227
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAI 136
+ + N+ V+PK G++LW D AI
Sbjct: 228 IVSKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P E+ ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEIYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
L K +V+ G S + VK L+ + N+ PPA++ A+
Sbjct: 299 L--------KPDVMAGISNFVYYANAVKDSTPLVNADIRNNPNVY---PPADLRAKL 344
>gi|419781473|ref|ZP_14307294.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK100]
gi|383184191|gb|EIC76716.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK100]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++K + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETKVDE---AP-EHWDDLWKPEYKDSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASR 141
++ N+ VVP ++LW D IP +
Sbjct: 241 QMLEKNPNLKYVVPTEASNLWFDNMVIPKTVK 272
>gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
Length = 341
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGTV I Y K+K ++ ++ W LW + I M+NS R+ +
Sbjct: 113 DYDPKNEYTV-PYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTL 167
Query: 72 GSIAVQLNLALLANQSAHHLK-------------AFGIGDVW---------VAVGWSSDV 109
G +L ++ + A K A+ + + +AV +S D
Sbjct: 168 GVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDA 227
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAI 136
+ + N+ V+PK G++LW D AI
Sbjct: 228 IVSKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|438130582|ref|ZP_20873498.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434941649|gb|ELL48063.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 370
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLRLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|417934209|ref|ZP_12577529.1| ABC transporter, solute-binding protein [Streptococcus mitis bv. 2
str. F0392]
gi|340770779|gb|EGR93294.1| ABC transporter, solute-binding protein [Streptococcus mitis bv. 2
str. F0392]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 93/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPGNKF-SIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKDSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + A+P+ L LP E + K A P A+ + E E
Sbjct: 289 NALK-NAEYVGYATPNNTAKEL--LPEETKEDK--------AFYPDADTMKNLEVYEKFD 337
>gi|417925726|ref|ZP_12569144.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
gi|341590933|gb|EGS34151.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
Length = 341
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGTV I Y K+K ++ ++ W LW + I M+NS R+ +
Sbjct: 113 DYDPKNEYTV-PYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTL 167
Query: 72 GSIAVQLNLALLANQSAHHLK-------------AFGIGDVW---------VAVGWSSDV 109
G +L ++ + A K A+ + + +AV +S D
Sbjct: 168 GVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDA 227
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAI 136
+ + N+ V+PK G++LW D AI
Sbjct: 228 IVSKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|261495061|ref|ZP_05991528.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309303|gb|EEY10539.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
Length = 364
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 51/240 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE AG++ +++ REV +IA
Sbjct: 137 QGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVF-NIA 192
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 193 LLKLGKNPNTTNPDEIKEAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIA 252
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
K + V +V PK G LW D AIPA ++ + H+ I + L A
Sbjct: 253 KKENAPVDMVFPKEGPVLWVDTLAIPANAKNKEN------------AHKLINYLLSAKIA 300
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
++ + P++ L LP E+ T IA P AE+L + ++ + + +A
Sbjct: 301 ---EKLTLAIGYPTSNVEALKVLPKEI--------TEDIAIYPSAEVLQKSQWQDDVGDA 349
>gi|417941003|ref|ZP_12584290.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK313]
gi|343388296|gb|EGV00882.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK313]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPGNKF-SIPYFWGTLGIVYNETMIDE---AP-EHWDDLWKPEYKDSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ +N+ VVP ++LW D IP + + + +I F ++
Sbjct: 241 QMLEKNTNLKYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMIKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
AL E + A+P+ L LP E + K P DT
Sbjct: 289 NALK-NAEYVGYATPNNTAKEL--LPEETKEDKSFYPDADT 326
>gi|256842787|ref|ZP_05548275.1| spermidine/putrescine ABC transporter periplasmic protein
[Lactobacillus crispatus 125-2-CHN]
gi|256614207|gb|EEU19408.1| spermidine/putrescine ABC transporter periplasmic protein
[Lactobacillus crispatus 125-2-CHN]
Length = 357
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 39/196 (19%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y KF K I+ W DLW + +I +V+S R+ +G V L
Sbjct: 132 YSVPYFWGTLGIVYN-DKFVKP--GAIKTWNDLWSKKYRRQILLVDSARDAMGMALVSLG 188
Query: 80 LALLANQS---------------------AHHLKAFGI-GDVWVAVGWSSDVLPAVKHMS 117
++ S + +K + + + + V WS + ++
Sbjct: 189 YSMNTTSSIKLHLAQTKLNSLGPNIKAIISDEMKMYLVQNEAAIGVTWSGEAYEMMEQNP 248
Query: 118 NV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARALPFKQ 176
++ VVPK G++LW D + IP K + + L ++I F L+ A P
Sbjct: 249 HLHYVVPKQGSNLWFDNFVIP-------KTVQNKKAAL-----KFINFMLEPKNAAP-NA 295
Query: 177 EVIPGASPSALESTLV 192
E + A+P+ L+
Sbjct: 296 EYVGYATPNTAAQKLL 311
>gi|220934438|ref|YP_002513337.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995748|gb|ACL72350.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 366
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 37/162 (22%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRISM------- 63
+DP G PY WGT I Y ++ A ++ W ++ PE+AG++S
Sbjct: 120 VDP-GNRFTVPYMWGTTGIGYNVAQVAAILGEEAEVDSWSLIFDPEIAGKLSACGIAVLD 178
Query: 64 ------------------VNSPREV--IGSIAVQLNLALLANQSAHHLKAFGIGDVWVAV 103
P ++ ++ +Q+ + ++ ++ GD+ VA
Sbjct: 179 DEGEALAAALLYLGKDPNTTDPADIEEAANLFMQVRPFIRYFHASRYINDLANGDICVAH 238
Query: 104 GWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA 138
G+S DV+ A V ++P+ GA LW DL AIPA
Sbjct: 239 GYSGDVIQARDRAEEVGRGVEIDYIIPREGAVLWFDLMAIPA 280
>gi|15894124|ref|NP_347473.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum ATCC 824]
gi|337736053|ref|YP_004635500.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum DSM 1731]
gi|384457562|ref|YP_005669982.1| Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum EA 2018]
gi|15023729|gb|AAK78813.1|AE007599_9 Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum ATCC 824]
gi|325508251|gb|ADZ19887.1| Spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum EA 2018]
gi|336292044|gb|AEI33178.1| spermidine/putrescine-binding periplasmic protein [Clostridium
acetobutylicum DSM 1731]
Length = 354
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 30/153 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ + PY WGT+ I Y K++ + ++ W DLW P+ ++ M + R +G
Sbjct: 125 DPKNS-YSVPYMWGTIGIIYDKTQIKDK----LDSWNDLWNPKYKDKVYMSDDMRNSLGI 179
Query: 74 IAVQLNLALLANQSAHHLKAFG--------IGDVWVA---------------VGWSSDVL 110
+L ++ + KA I V+V V +S D
Sbjct: 180 SLKRLGYSMNSKNKNEISKASSALIEQKKLINPVYVGDEIKDDMRNGEKPIGVIYSGDAA 239
Query: 111 PAVKHMSNVA--VVPKSGASLWADLWAIPAASR 141
+ N V+PK G +LW D W IP ++
Sbjct: 240 VLMNENPNKYEYVIPKEGTNLWFDSWVIPKNAK 272
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY W T I Y K + AP+ W + P+ + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLNPDNLAKLKGCGVSFLDA 181
Query: 67 PREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAVG 104
P E+ ++ L+L ++ S+ ++ GD+ VAVG
Sbjct: 182 PAEIYATVLNYLHLDPNSTKPEDYTAATDLLLKLRPSIRYFHSSQYINDLANGDICVAVG 241
Query: 105 WSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
W+ DV+ A K+ N+A +PK GA + D++A+PA ++
Sbjct: 242 WAGDVIQASNRAKEAKNGVNIAYSIPKEGALAFFDVFAMPADAK 285
>gi|418404835|ref|ZP_12978276.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|359501215|gb|EHK73836.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
Length = 387
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 46/222 (20%)
Query: 6 RRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWR---PELAGRIS 62
R + G +D GK A P WGT IA K + AP+ WKD + E GR
Sbjct: 152 RFTNEGSVD--GKTYAVPKNWGTTGIAVNSDKIK----APVASWKDFFEIAMTEADGRAM 205
Query: 63 MVNSPREVIGSIAVQLNLALLANQSAHHLKA-----------FGIG----------DVWV 101
+ + IG+ V L + + ++ KA + I D W+
Sbjct: 206 VHDYQLTTIGNALVSLGFSFNSIKAEELAKAEELLIKVKPHLYAINSDYQPSMRATDAWM 265
Query: 102 AVGWSSDVLPAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
+ W++D + M + V+ K G +W+D +AIP ++ + P +
Sbjct: 266 TMCWTNDGAQLNRDMPEIKFVLGKDGGEIWSDFYAIPKSAANK------------PAGYA 313
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
+++ + A A+ +E I +P+ + LP ++ K
Sbjct: 314 LLDYLMTPANAV---KEHIANGAPTTDSRVMKLLPADVTSNK 352
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 60/237 (25%)
Query: 23 PYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSI- 74
PY T I Y K + AP++ W + +PE + +S +++P EV ++
Sbjct: 131 PYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVL 190
Query: 75 ------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAVGWSSDVLPA 112
A L L L N S+ ++ GD+ VA+GWS DV+ A
Sbjct: 191 HYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQA 250
Query: 113 ------VKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFC 165
K+ NVA +PK GA + D++A+PA ++ + +Q++ F
Sbjct: 251 ANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA------------YQFLNFL 298
Query: 166 LQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARF 222
+ K +V+ G S + VK L+ + + N+ PPA++ A+
Sbjct: 299 M--------KPDVMAGISNFVYYANAVKDSTPLVNAEVRNNPNVY---PPADLRAKL 344
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
E++ ++ L L LLA S+ ++ GD+ VA+G+
Sbjct: 180 DEMMPTVLNYLGLNANSTNPKDYEKATDKLLAVRPYVTYFHSSKYIGDLANGDICVAIGF 239
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAAS 140
S D+ A K N+A VPK G +LW D+ AIP S
Sbjct: 240 SGDIFQAKNRAAEAKKGVNIAYAVPKEGGALWFDMLAIPKDS 281
>gi|312869661|ref|ZP_07729809.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus oris PB013-T2-3]
gi|311094795|gb|EFQ53091.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus oris PB013-T2-3]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 51/242 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
RG + PY WGT+ I Y K R + ++ W LW P L + +++S R+V
Sbjct: 127 RGNRYSVPYFWGTLGIIYNDQKVRAQD---VQHWSQLWNPRLRNNLMLIDSARDVFAMAL 183
Query: 73 -SIAVQLNLALLA--NQSAHHLKAFG------IGD----------VWVAVGWSSDV--LP 111
S +N A ++ HLK + D V V +S D +
Sbjct: 184 ISQGQSVNTTSYAKLKKAQDHLKTLTPNVKAIVADEMKMYMEQDEAAVGVTYSGDAREMM 243
Query: 112 AVKHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARA 171
+V H + VVP G+++W D IP R + +I F L+ A A
Sbjct: 244 SVNHHLHY-VVPSEGSNIWFDNMVIP------------RAAKNKAAAYAFINFMLEPANA 290
Query: 172 LPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLSEA 231
E + A+P+A + +LP + + A PPA+ + + L
Sbjct: 291 AQ-NAEYVGYATPNA--AARRRLPKRVTADR--------AFYPPAKTMNHLQVYRDLPLK 339
Query: 232 TL 233
TL
Sbjct: 340 TL 341
>gi|312871346|ref|ZP_07731443.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 3008A-a]
gi|312873700|ref|ZP_07733746.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2052A-d]
gi|311090800|gb|EFQ49198.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 2052A-d]
gi|311093139|gb|EFQ51486.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus iners LEAF 3008A-a]
Length = 357
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 12 EIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
IDP+ G + PY WGT+ I Y KF K I+ W DLW+ + +I +
Sbjct: 116 NIDPQFMNQSFDYGNKYSIPYFWGTLGIIYN-DKFVKK--GEIKHWNDLWKSKFKHQILL 172
Query: 64 VNSPREVIGSIAVQLNLALLANQS---------------------AHHLKAFGI-GDVWV 101
V+S R+++G + + ++ + S A LK + I + +
Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGSNVKAIIADELKMYMIRNEASI 232
Query: 102 AVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
V WS + + ++ VVP G++LW D IP ++ Q G +
Sbjct: 233 GVTWSGEARTMLNENPHLHYVVPSEGSNLWLDNIVIPKTAK---NQAGA---------YA 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
+I F L A + I A+P+ L L LP + K +
Sbjct: 281 FINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 319
>gi|308179452|ref|YP_003923580.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum subsp. plantarum ST-III]
gi|308044943|gb|ADN97486.1| spermidine/putrescine ABC transporter, substrate binding protein
[Lactobacillus plantarum subsp. plantarum ST-III]
Length = 284
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLN 79
+ PY WGT+ I Y + I+ W DLW+ + +I +++S R+V+G +N
Sbjct: 60 YSVPYFWGTLGIIYNDKYVQP---GSIQHWNDLWQRKYHNKIMLIDSARDVMGFALASMN 116
Query: 80 LA--------LLANQS-------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVK 114
+ LLA ++ A +K + I + +AV WS S++L
Sbjct: 117 QSMNTTDPATLLAARNKLNRLSPNVKAVVADEIKMYMIQNEAAIAVDWSGEASEMLAGNS 176
Query: 115 HMSNVAVVPKSGASLWADLWAIPAASR 141
H+ VVP G++LW D IP ++
Sbjct: 177 HLH--YVVPSEGSNLWFDNLVIPKTAK 201
>gi|343519595|ref|ZP_08756575.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
gi|343392665|gb|EGV05230.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
Length = 361
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 36/162 (22%)
Query: 12 EIDP--------RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
E+DP +G + P G IA+ + ++ + W DLW+PE A ++ +
Sbjct: 122 ELDPDWLNKPYDQGNKYSLPQLLGAPGIAFNTNTYKGSDFTA---WGDLWKPEFANKVQL 178
Query: 64 VNSPREVIGSIA-----------------------VQLNLALLANQSAHHLKAFGIGDVW 100
++ REV +IA ++L +LA S + AF G+V
Sbjct: 179 LDDAREVF-NIALLKLGQDPNTKDPAIIKQAYEELLKLRPNVLAFNSDNPANAFISGEVE 237
Query: 101 VAVGWSSDVLPAVKHMSNVAVV-PKSGASLWADLWAIPAASR 141
V W+ V A K + + +V PK G LW D AIP+ S+
Sbjct: 238 VGQLWNGSVRIAKKEQAPLDMVFPKEGPVLWVDTLAIPSTSK 279
>gi|323351688|ref|ZP_08087342.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
VMC66]
gi|322122174|gb|EFX93900.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
VMC66]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------------SIAVQLNLALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
AV L N A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDTNQLQEAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEVQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|168487385|ref|ZP_02711893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1087-00]
gi|419509928|ref|ZP_14049572.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP141]
gi|419529983|ref|ZP_14069514.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40028]
gi|421213408|ref|ZP_15670365.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070108]
gi|421215409|ref|ZP_15672334.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070109]
gi|183569782|gb|EDT90310.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
pneumoniae CDC1087-00]
gi|379574723|gb|EHZ39661.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae GA40028]
gi|379633121|gb|EHZ97690.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae NP141]
gi|395579640|gb|EJG40138.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070108]
gi|395580422|gb|EJG40904.1| bacterial extracellular solute-binding family protein
[Streptococcus pneumoniae 2070109]
Length = 356
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 17 GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG---- 72
G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 129 GNKFSIPYFWGTLGIVYNETMVYE---AP-EHWDDLWKPEYKNSIMLFDGAREVLGLGLN 184
Query: 73 SIAVQLNLALLANQS-----------------AHHLKAFGI-GDVWVAVGWSSDVLPAVK 114
S+ LN L A +K + I +V + V +S + ++
Sbjct: 185 SLGYSLNSKDLQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEASQMLE 244
Query: 115 HMSNV-AVVPKSGASLWADLWAIPAASR 141
N+ VVP ++LW D IP +
Sbjct: 245 KNENLRYVVPTEASNLWFDNMVIPKTVK 272
>gi|256851433|ref|ZP_05556822.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 27-2-CHN]
gi|260660854|ref|ZP_05861769.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 115-3-CHN]
gi|297206247|ref|ZP_06923642.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus jensenii
JV-V16]
gi|256616495|gb|EEU21683.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 27-2-CHN]
gi|260548576|gb|EEX24551.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
jensenii 115-3-CHN]
gi|297149373|gb|EFH29671.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus jensenii
JV-V16]
Length = 357
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIAVQLNL 80
+ PY WGT+ I Y K+ K I+ W DLW + I +V+S R+++GS V L
Sbjct: 133 SVPYFWGTLGIIYN-DKYVKP--GEIQHWNDLWNSKWKNSILLVDSARDIMGSSLVSLGY 189
Query: 81 ALLANQS---------------------AHHLKAFGI-GDVWVAVGWS---SDVLPAVKH 115
++ S + +K + I + +AV WS S++L H
Sbjct: 190 SMNTTNSVELKLAKTKLDSLGANVKAIISDEIKMYMIQNEAALAVTWSGEASEMLSNNSH 249
Query: 116 MSNVAVVPKSGASLWADLWAIPAASR 141
+ VVP+ G++LW D IP ++
Sbjct: 250 LH--YVVPEEGSNLWFDNMVIPKTAK 273
>gi|429333936|ref|ZP_19214617.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761329|gb|EKX83562.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 367
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 68/256 (26%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY +GTV+I + +K + + AP++ W +++ E + +++++S
Sbjct: 122 DPGNKF-AVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDS 180
Query: 67 PREVIGSIAVQLNLALLAN------------------------QSAHHLKAFGIGDVWVA 102
P E++ +A+Q L L N S+ ++ GD+ VA
Sbjct: 181 PSEIM-PLALQY-LGLSPNSSKPEDYKKAEALMLKIRPYITYFHSSKYMADIANGDICVA 238
Query: 103 VGWSSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGL 154
VG+S A ++ + V V +PK GA +W D+ AIP A+ E
Sbjct: 239 VGYSGSFSQAANRAIEAKNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDA--------- 289
Query: 155 SPLIHQWIEFCLQTARALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
H +I++ LQ P V P + A E L ++ P+L
Sbjct: 290 ----HAFIDYLLQPKVIAPISDFVGYPNPNKDATE-----LVAPAIRNNPNL-------Y 333
Query: 214 PPAEILARFEFLEPLS 229
P AE + + L+PL+
Sbjct: 334 PTAEAMTKLYTLQPLA 349
>gi|387774151|ref|ZP_10129423.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
gi|386902295|gb|EIJ67136.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
Length = 359
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE A +I +++ REV +IA
Sbjct: 132 KGNKYSLPQLLGAPGIAFNTNNYKGDQFT---SWGDLWKPEFANKIQLLDDAREVF-NIA 187
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 188 LLKLGKNPNTTDPEEIKAAYEELKKLRPNVLSFSSDNPANSFISGEVSVGQLWNGSVRIA 247
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + + +V PK G LW D AIPA S+
Sbjct: 248 KKEQAPIDMVFPKEGPVLWVDTLAIPANSK 277
>gi|374704387|ref|ZP_09711257.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 366
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY +GTV+I + +K ++ AP++ W +++ E + ++M++S
Sbjct: 121 DP-GNEHAVPYMYGTVIIGFNPAKVKEALGANAPVDSWDLIFKEENISKLKQCGVAMLDS 179
Query: 67 PREVIG------------------SIAVQLNLALLAN----QSAHHLKAFGIGDVWVAVG 104
P +++ + A L + + N SA ++ G++ VAVG
Sbjct: 180 PGDIMPIALHYLGLNPNSTKKADYAKATDLMMKIRPNIAYFHSAKYMTDIANGNICVAVG 239
Query: 105 WSSDVLPAV---KHMSNVAVV----PKSGASLWADLWAIPAASR 141
+S + K + N VV PK GA LW D +AIPA+++
Sbjct: 240 YSGSFFKSANRAKEVGNGVVVVWRLPKEGAPLWFDSFAIPASAQ 283
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPRE 69
G A PY WGT I Y K K P+ W+ L++ ++ + ++MV++P E
Sbjct: 119 EGNQHAIPYMWGTTGIGYNIDKVSKILGNKPVNTWELLFQVDIVSKFTDCGVAMVDAPSE 178
Query: 70 VIGSIAVQL----NLALLAN------------------QSAHHLKAFGIGDVWVAVGWSS 107
V+ ++ L N LA+ S+ ++ G++ +A+GWS
Sbjct: 179 VVSAMLKYLGKNPNSQDLADLKLVEEHLLKIRPYITYFHSSSYVTDLASGNICLAMGWSG 238
Query: 108 DVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
DV A K+ NV V+P+ GA WAD + I + S+
Sbjct: 239 DVFMAANRAIEAKNGINVNYVIPREGAQGWADTFNITSDSK 279
>gi|261493836|ref|ZP_05990350.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452745507|ref|ZP_21945341.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
gi|1142681|gb|AAA84748.1| Lpp38 [Mannheimia haemolytica]
gi|261310539|gb|EEY11728.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086382|gb|EME02771.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
Length = 364
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE AG++ +++ REV +IA
Sbjct: 137 QGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVF-NIA 192
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 193 LLKLGKNPNTTNPDEIKEAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIA 252
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + V +V PK G LW D AIPA ++
Sbjct: 253 KKENAPVDMVFPKEGPVLWVDTLAIPANAK 282
>gi|399008900|ref|ZP_10711351.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398114411|gb|EJM04232.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 362
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 36/160 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + PY WGT I Y K ++ + I+ W + PE + +SM++SP
Sbjct: 118 DP-GNQYSVPYLWGTNGIGYNVDKVKQVLGIDSIDSWAVFFEPENLKKLSQCGVSMMDSP 176
Query: 68 REVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVGW 105
EV ++ + L + A + KA G++ +A G+
Sbjct: 177 DEVFPAVLNYMGLDPRSENPADYKKAEAKLLAIRPYITYFHSSKYVSDLANGNICLAFGY 236
Query: 106 SSDVLPAV------KHMSNVAV-VPKSGASLWADLWAIPA 138
S DV A K+ +A +PK G++LW DL AIPA
Sbjct: 237 SGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|259501471|ref|ZP_05744373.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners DSM
13335]
gi|302191560|ref|ZP_07267814.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
iners AB-1]
gi|349612399|ref|ZP_08891619.1| hypothetical protein HMPREF1027_01046 [Lactobacillus sp. 7_1_47FAA]
gi|259167139|gb|EEW51634.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus iners DSM
13335]
gi|348608848|gb|EGY58816.1| hypothetical protein HMPREF1027_01046 [Lactobacillus sp. 7_1_47FAA]
Length = 357
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 12 EIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
IDP+ G + PY WGT+ I Y KF K I+ W DLW+ + +I +
Sbjct: 116 NIDPQFMNQSFDYGNKYSIPYFWGTLGIIYN-DKFVKK--GEIKHWNDLWKSKFKHQILL 172
Query: 64 VNSPREVIGSIAVQLNLALLANQS---------------------AHHLKAFGI-GDVWV 101
V+S R+++G + + ++ + S A LK + I + +
Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGSNVKAIIADELKMYMIRNEASI 232
Query: 102 AVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
V WS + + ++ VVP G++LW D IP ++ Q G +
Sbjct: 233 GVTWSGEARTMLNENPHLHYVVPSEGSNLWLDNIVIPKTAK---NQAGA---------YA 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
+I F L A + I A+P+ L L LP + K +
Sbjct: 281 FINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 319
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 147 DPDNKY-AMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 205
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 206 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 265
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 266 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 310
>gi|424923823|ref|ZP_18347184.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304983|gb|EJZ58945.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E+I +
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 74 IAVQLNLALLANQSAHHLKAFGI----------------------GDVWVAVGWSSDVLP 111
L + AH L+A + G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDKDKAHILEAEALFMKIRPYVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 ----AVKHMSNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQWIE 163
A++ + V + +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAMEAGNKVQIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEITN 305
Query: 164 ---FCLQTARALPFKQEVI---PGASPS-ALESTLVKLPGE 197
+ + A P E I PG+ PS A+ +TL +P +
Sbjct: 306 SNGYSNANSAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|398883084|ref|ZP_10638044.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398197341|gb|EJM84321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 365
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 40/159 (25%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
PY WGT+ + Y + ++ AP+ L++PELA + ISM++SP EV+
Sbjct: 125 ATVPYTWGTIGLTYNDEQIKQRLPDAPVNSLDMLFKPELASKFADCGISMIDSPDEVL-- 182
Query: 74 IAVQLNLALLANQSAH----------------HLKAFGI--------GDVWVAVGWSSDV 109
AV LN +SA H++ F G++ V++G+S D+
Sbjct: 183 -AVVLNYLGREPRSAKPEDLAAASELLMKLRPHIRKFQSQPVTDLVNGNLCVSLGYSGDM 241
Query: 110 LPAVKHMSNVAV-------VPKSGASLWADLWAIPAASR 141
A + + +P+ G ++W D AIP ++
Sbjct: 242 TQAQRTSDSAGKSTRFEYRIPREGTTVWMDTMAIPVDAK 280
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNKY-AMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|308048910|ref|YP_003912476.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631100|gb|ADN75402.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 345
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 58/248 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP+ + PY WG+ I + + A I WKDLW P+ + + N REV
Sbjct: 116 DPKNT-YSIPYVWGSTAIGVNADEI---DPATITSWKDLWDPKWQRSLLLTNDVREVF-H 170
Query: 74 IAVQLN-------------------LALLANQSAHHLKA----FGIGDVWVAVGWSSDVL 110
+A+++N +L+ N + A F GDV + + W+ +
Sbjct: 171 MALRINGHSGNSTDPEEIKQAYELLRSLMPNVLVFNSDAPREPFLAGDVNLGMLWNGEAF 230
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSPLIHQWIEFCLQT 168
A + + + PK GA+LW D +AIP A+ +E H++I+F ++
Sbjct: 231 MAQQEEEAIQYIYPKEGAALWVDSFAIPVNAANVENA-------------HKFIDFMMR- 276
Query: 169 ARALPFKQEVIPGASPSALESTLVKLPGELLKG--KPSLDTNLIAGVPPAEILARFEFLE 226
P + +E P E G P N A PP E++ + EF +
Sbjct: 277 -----------PEIAVQVVEYLGYTTPNETAIGMLDPEYSEN-TAIFPPEEVVKQGEFQQ 324
Query: 227 PLSEATLS 234
+ + L+
Sbjct: 325 DVGDEALA 332
>gi|398921870|ref|ZP_10660034.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398164240|gb|EJM52383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 366
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G PY +GTV+I + +K + AP++ W +++PE + ++M++S
Sbjct: 121 DP-GNQYGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLDS 179
Query: 67 PREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P E++ ++ +++ + SA ++ GD+ VA+G
Sbjct: 180 PSEILPLALHYLGLDPNSQNPDDYEKAKALMLKVRPYVTYFNSAKYMTDIANGDICVAIG 239
Query: 105 WSSDVLPA---VKHMSNVAVV----PKSGASLWADLWAIPAASR 141
+S K N VV PK GA +W D +AIP ++R
Sbjct: 240 YSGSFYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAR 283
>gi|398877211|ref|ZP_10632359.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398202938|gb|EJM89770.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 40/159 (25%)
Query: 20 CAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
PY WGT+ + Y + ++ AP+ L++PELA + ISM++SP EV+
Sbjct: 125 ATVPYTWGTIGLTYNDEQIKQRLPDAPVNSLDMLFKPELASKFADCGISMIDSPDEVL-- 182
Query: 74 IAVQLNLALLANQSAH----------------HLKAFGI--------GDVWVAVGWSSDV 109
AV LN +SA H++ F G++ V++G+S D+
Sbjct: 183 -AVVLNYLGREPRSAKPEDLAAASELLMKLRPHIRKFQSQPVTDLVNGNLCVSLGYSGDM 241
Query: 110 LPAVKHMSNVAV-------VPKSGASLWADLWAIPAASR 141
A + + +P+ G ++W D AIP ++
Sbjct: 242 TQAQRTSDSAGKSTRFEYRIPREGTTVWMDTMAIPVDAK 280
>gi|386390018|ref|ZP_10074815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
gi|385694060|gb|EIG24686.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
Length = 359
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE A +I +++ REV +IA
Sbjct: 132 KGNKYSLPQLLGAPGIAFNTNNYKGDQFT---SWGDLWKPEFANKIQLLDDAREVF-NIA 187
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 188 LLKLGKNPNTTDPEEIKAAYEELKKLRPNVLSFSSDNPANSFISGEVSVGQLWNGSVRIA 247
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + + +V PK G LW D AIPA S+
Sbjct: 248 KKEQAPIDMVFPKEGPVLWVDTLAIPANSK 277
>gi|301066029|ref|YP_003788052.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei str. Zhang]
gi|417980214|ref|ZP_12620895.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
12A]
gi|300438436|gb|ADK18202.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
casei str. Zhang]
gi|410525441|gb|EKQ00343.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
12A]
Length = 357
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ATEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|169824263|ref|YP_001691874.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|167831068|dbj|BAG07984.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
Length = 341
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 71
+ DP+ + PY WGTV I Y K+K ++ ++ W LW + I M+NS R+ +
Sbjct: 113 DYDPKNEYTV-PYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTL 167
Query: 72 GSIAVQLNLALLANQSAHHLK-------------AFGIGDVW---------VAVGWSSDV 109
G +L ++ + A K A+ + + +AV +S D
Sbjct: 168 GVALKRLGYSMNSRNEAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDA 227
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAI 136
+ + N+ V+PK G++LW D AI
Sbjct: 228 IVSKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|372276175|ref|ZP_09512211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. SL1_M5]
Length = 369
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 40/166 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA--------VVPKSGASLWADLWAIPAASR 141
GWS D+L A K+ ++ A VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQA-KNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|254362547|ref|ZP_04978648.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
gi|153094148|gb|EDN75044.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
Length = 323
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ W DLW+PE AG++ +++ REV +IA
Sbjct: 96 QGNKYSLPQLLGAPGIAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVF-NIA 151
Query: 76 V-----------------------QLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
+ +L +L+ S + +F G+V V W+ V A
Sbjct: 152 LLKLGKNPNTTNPDEIKEAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIA 211
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASR 141
K + V +V PK G LW D AIPA ++
Sbjct: 212 KKENAPVDMVFPKEGPVLWVDTLAIPANAK 241
>gi|314933299|ref|ZP_07840664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
caprae C87]
gi|313653449|gb|EFS17206.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
caprae C87]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 27/151 (17%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 73
DP K + PY +GTV I Y K K+ W DL++ + I +V+ RE++G
Sbjct: 127 DPHNK-YSLPYFFGTVGILYNKEKYPHEKF---NSWSDLYQSKYKNDILLVDGAREIMGM 182
Query: 74 IAVQLNLALLANQSAH------HLKAFG------IGDVW----------VAVGWSSDVLP 111
+L +L + +H LK +GD +AV WS P
Sbjct: 183 GLNKLGYSLNDSNPSHIKRAEVDLKKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAP 242
Query: 112 AVKHMSNV-AVVPKSGASLWADLWAIPAASR 141
V++ + V+PK G++LW D IP ++
Sbjct: 243 LVQNSNKYDYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|239631272|ref|ZP_04674303.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|239525737|gb|EEQ64738.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
paracasei subsp. paracasei 8700:2]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K ++ W LW P+ I +++S R+V
Sbjct: 128 RNNKYSIPYFWGTLGIIYN-DKFVK--ATEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 184
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 185 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 244
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 245 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 273
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + P+ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAALGGDVPLNSWDLVLKPENLAKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P EV ++ A +L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSEKADDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ ++PK GA + D++A+P ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYIIPKEGALAFFDVFAMPTDAK 287
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAVLGKDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|374705417|ref|ZP_09712287.1| polyamine ABC transporter periplasmic polyamine-binding protein
PotD [Pseudomonas sp. S9]
Length = 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 73/252 (28%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAG-RISMVNSPREVIG 72
DP G+ C PY WGTV I Y K+K K PIE W D + AG ++ M++ RE +G
Sbjct: 118 DPNGEYCM-PYAWGTVGIFYNKTKVSK----PIETWDDFFAEAKAGKKVIMLDDMRETLG 172
Query: 73 SIAVQLNLALLANQSAHHLKAFGIGDVWVAVGW-----------SSDVLPAVKHMSNVA- 120
+ L+ N + + D+ +A W + D +P V+ VA
Sbjct: 173 -------VGLIEN--GKSVNSTNRDDLKLAADWLLQRKPLISAFTYDSVPMVQSGDAVAA 223
Query: 121 -------------------VVPKSGASLWA-DLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
V+PK GA+++ D+ + +A + +
Sbjct: 224 QYFVGAEMYVKQEPEKLAYVIPKGGATMYQEDMCVLKSAPNKANAK-------------R 270
Query: 161 WIEFCLQ-TARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEIL 219
++EF L AL Q+ +P+ ++ L LP + L+ P ++ PPA+++
Sbjct: 271 FMEFFLDPEIAALNTAQQT--NGTPN--KAALKLLPSD-LRDDPQIN-------PPADVM 318
Query: 220 ARFEFLEPLSEA 231
A+ + E + +A
Sbjct: 319 AKLQIFEDIGKA 330
>gi|49086268|gb|AAT51340.1| PA1410, partial [synthetic construct]
Length = 364
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 60/251 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G PY WGT IAY K R + AP++ W +++PE + ++ ++S
Sbjct: 118 DP-GNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDS 176
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
P EVI + L L+ ++Q + +A G+V VA+
Sbjct: 177 PTEVIPEVLHYLGLSPNSHQPEDYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIA 236
Query: 105 WSSDVLPAVKHMSNVAV-------VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
WS + A +PK GA+ W D+ AIP ++ +Q
Sbjct: 237 WSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ----------- 284
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
H ++++ L+ P + + A+P+ L+ L+ P++ PP E
Sbjct: 285 AHAFLDYLLRPEVVTPI-SDYVAYANPNKAADGLI---SAELRDNPNV-------YPPEE 333
Query: 218 ILARFEFLEPL 228
+ AR +E L
Sbjct: 334 VQARLYSVEML 344
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 23 PYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVI---- 71
PY WG+ I Y K R+ + P + W+ L+ PE+ + +++++ P EV+
Sbjct: 126 PYMWGSSGIGYNVEKVREVLGDDMPKDTWRLLFDPEIVAKLASCGVTLMDDPTEVLVAAN 185
Query: 72 ---GSIAVQLNLALLAN---------------QSAHHLKAFGIGDVWVAVGWSSDVLPAV 113
G+ A + A +A S+ ++ GD+ VA G+S DVL A
Sbjct: 186 IYRGANADDFSKAGIAGASETVAAVRPHIRYFHSSQYINDLANGDICVAHGYSGDVLQAR 245
Query: 114 KHMSNVA-------VVPKSGASLWADLWAIPA 138
+ VP GA +W D+ AIPA
Sbjct: 246 DRAAEAGNGVEIAYAVPSEGALVWTDVMAIPA 277
>gi|260565904|ref|ZP_05836374.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
gi|260155422|gb|EEW90502.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
Length = 374
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 36/167 (21%)
Query: 10 AGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISM 63
A DP G +A Y WGT I Y K+K ++ I+ W L+ PE + I +
Sbjct: 126 AATYDP-GNEYSANYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYL 184
Query: 64 VNSPREVIG------------------SIAVQLNLALLAN----QSAHHLKAFGIGDVWV 101
++S E++ A L L + N S+ ++ A GD+ +
Sbjct: 185 LDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICM 244
Query: 102 AVGWSSDVLPA----VKHMSNVAV---VPKSGASLWADLWAIPAASR 141
AVG+S D+ A K V + +PK GA +W D AIPA ++
Sbjct: 245 AVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 67
DP G + A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 68 REVIGSIAVQLNL---------------ALLA-------NQSAHHLKAFGIGDVWVAVGW 105
E++ ++ + L LLA S+ ++ GD+ VA+G+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPKDYEKATAKLLAVRPYVTYFHSSKYIGDLANGDICVAIGF 239
Query: 106 SSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAAS 140
S D+ A K N+A VPK G +LW D+ AIP S
Sbjct: 240 SGDIFQAKNRAAEAKKGVNIAYTVPKEGGALWFDMLAIPKDS 281
>gi|336312486|ref|ZP_08567435.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
gi|335863992|gb|EGM69110.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
Length = 366
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 62/246 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y K + AP + ++ P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
+++ + L L + ++ + KA GD+ VA G
Sbjct: 180 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSP 156
+S DV A +PK GA+LW D+ AIPA A+ ++
Sbjct: 240 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVDNA----------- 288
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPA 216
H+ I + L+ P V A+P+ LV E ++ P++ PP
Sbjct: 289 --HKLINYLLRPDVIAPISNYV-AYANPNDPAQPLVD---EAIRNDPAI-------YPPK 335
Query: 217 EILARF 222
E+L +
Sbjct: 336 EVLDKL 341
>gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 369
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ D+L A K+ N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|357417210|ref|YP_004930230.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
gi|355334788|gb|AER56189.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
Length = 381
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 43/167 (25%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + N W +++PE + ++ +++
Sbjct: 136 DP-GNRYAVPYMWGTTGIGYNVDKVKAAFGNTDVANSWDLVFKPENLAKLKDCGVTFLDT 194
Query: 67 PREVIGSIAVQLNL-----------------ALLAN--------QSAHHLKAFGIGDVWV 101
P E++ + LN ALL S+ ++ A GD +
Sbjct: 195 PSEIV---PIALNYLGEDPNSTDPKVIDKAAALLKTIRPSISQFHSSSYIDAMANGDTCL 251
Query: 102 AVGWSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPAASR 141
VGWS DV+ A +PK GA LW D+ AIP +R
Sbjct: 252 VVGWSGDVIQARDRAEEAGNGVKIAYSIPKEGAPLWFDMLAIPKDAR 298
>gi|319892100|ref|YP_004148975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus pseudintermedius HKU10-03]
gi|317161796|gb|ADV05339.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Staphylococcus pseudintermedius HKU10-03]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 81/210 (38%), Gaps = 41/210 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG--- 72
R + PY +GTV I Y K K+ W L P L + +V+ RE++G
Sbjct: 129 RKNEYSMPYFFGTVGILYDKEKYED---IDFNSWNALKDPRLKNDVLLVDGAREIMGISL 185
Query: 73 -SIAVQLNLALLAN--QSAHHLKAFG------IGD----------VWVAVGWSSDVLPAV 113
S+ LN + Q+ HLK F +GD AV WS P
Sbjct: 186 NSLGYSLNDKNPEHLKQAEQHLKTFAPNIRGVVGDEIQMMLEQHEASAAVIWSGSAAPVF 245
Query: 114 KHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTARAL 172
VVPK G++LW D IP ++ V G H++I F L
Sbjct: 246 HEDERFDYVVPKEGSNLWFDNMVIPKTAQ--------NVEG----AHKFINFLLD-PEVN 292
Query: 173 PFKQEVIPGASPSALESTLVKLPGELLKGK 202
E + A+P+ E+ +LP E+ K
Sbjct: 293 KQNTEWVEYATPN--ETARKQLPEEIRDDK 320
>gi|299133628|ref|ZP_07026822.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
gi|298591464|gb|EFI51665.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
Length = 363
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 39/171 (22%)
Query: 8 NDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR---- 60
N + DP G + AA Y WGT I Y S K L P I+ W ++ PE +
Sbjct: 112 NHLAQYDP-GNLYAANYMWGTTGIGYNVSAVHKI-LGPNAVIDSWDTIFNPEKIAKFKDC 169
Query: 61 -ISMVNSPREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIG 97
I M++S +++ + ++ + S+ +L A G
Sbjct: 170 GIHMLDSADDILPAALNWLGLDPNSTRREDLEKAAEVVAKIRPYVRKFHSSEYLSALATG 229
Query: 98 DVWVAVGWSSDVLPAVKHM--SNVAV-----VPKSGASLWADLWAIPAASR 141
++ +AVGWS D+ A K SN V +PK GA ++ D AIP+ ++
Sbjct: 230 EICLAVGWSGDIKQAQKRAAESNNGVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|219870359|ref|YP_002474734.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
parasuis SH0165]
gi|219690563|gb|ACL31786.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus parasuis SH0165]
Length = 346
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 55/242 (22%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
+G + P G IA+ + ++ N W DLW+PE G++ +++ REV +IA
Sbjct: 119 KGNKYSLPQLLGAPGIAFNTNSYKGDNFTA---WGDLWKPEFKGKVQLLDDAREVF-NIA 174
Query: 76 -----------------------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLPA 112
++L +LA S + +F G+V V W+ V A
Sbjct: 175 LLKLGQDPNTKDPAVIKAAYEELLKLRPNVLAFSSDNPANSFISGEVEVGQLWNGSVRIA 234
Query: 113 VKHMSNVAVV-PKSGASLWADLWAIPAASRLETKQIGGRVRGLSP-LIHQWIEFCLQTAR 170
K + V +V PK G LW D AIP+ + +P H+ I + L
Sbjct: 235 KKEQAPVNMVFPKEGPVLWVDTLAIPSNVK-------------NPDAAHKLINYLLSAPV 281
Query: 171 ALPFKQEV-IPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
A E+ P ++ ALE KLP E+ T A P +E+L + ++ + +
Sbjct: 282 AEKLTLEIGYPTSNVKALE----KLPKEI--------TEDPAIYPTSEVLQKSQWQDDVG 329
Query: 230 EA 231
+A
Sbjct: 330 DA 331
>gi|309800693|ref|ZP_07694833.1| ABC transporter, substrate-binding protein [Streptococcus infantis
SK1302]
gi|308115678|gb|EFO53214.1| ABC transporter, substrate-binding protein [Streptococcus infantis
SK1302]
Length = 339
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 46/221 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 109 FDPNNQ-YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 163
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 164 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 223
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 224 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPD 271
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
AL E + A+P+ + LP E + K P DT
Sbjct: 272 NALK-NAEYVGYATPNTAAKEM--LPEETKEDKSFYPDADT 309
>gi|374574738|ref|ZP_09647834.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
gi|374423059|gb|EHR02592.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
Length = 368
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G + AA Y WGT I Y +K ++ A IE W +++PE + + M++S
Sbjct: 123 DP-GNVYAANYMWGTTGIGYNVAKLKQILGADAKIESWDIVFKPENLAKFKDCGVHMLDS 181
Query: 67 PREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
++ + ++ ++ S+ +L A G++ VG
Sbjct: 182 ADDIFPAALNYLGLDPNSTKQADLDKAADVVAKVRPSVRKFHSSEYLSALATGEICFVVG 241
Query: 105 WSSDVLP----AVKHMSNVAV---VPKSGASLWADLWAIPAASR 141
WS D++ A + S + + +PK GA ++ D AIPA +R
Sbjct: 242 WSGDIMQARARAAEAKSGIEIGYAIPKEGAQMFFDNLAIPADAR 285
>gi|422846543|ref|ZP_16893226.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK72]
gi|325687986|gb|EGD30006.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus sanguinis
SK72]
Length = 356
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y + K AP E W DLWRPE I M++ REV+G
Sbjct: 126 FDP-GNQYSIPYFWGTLGIVYNEKMVDK---AP-EHWNDLWRPEYKNSIMMIDGAREVMG 180
Query: 73 ------------SIAVQLNLAL---------LANQSAHHLKAFGI-GDVWVAVGWSSDVL 110
A QL A+ + A +K + I + + V +S +
Sbjct: 181 IGLNSDGHSLNSKDADQLQGAVDKLYTLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAR 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ ++ VVP ++LW D IP ++ K+ +Q+I F L+
Sbjct: 241 QMLEANEDLRYVVPTEASNLWFDNIVIPKT--VKNKKAA----------YQFINFMLRPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
A +K + G S L + + LP E+ + + A P E + E E L
Sbjct: 289 NA--YKNALYVGYSTPNLPAKAM-LPKEVQEDE--------AFYPTEETMKHLEVYEQL 336
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 36/162 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 65
++DP G A PY WGT I Y K + + I+ W ++ PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 173
Query: 66 SPREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAV 103
S E+I ++ L L + S+ ++ GD+ VA
Sbjct: 174 SADEMIPAVLNYLGLDPNSHKPEDIKRAEEQLLKVRPYVTYFHSSKYIGDLANGDICVAA 233
Query: 104 GWSSDVLPAVKHMS------NVAV-VPKSGASLWADLWAIPA 138
G+S D+L A N+A +PK G +LW D+ AIPA
Sbjct: 234 GFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 275
>gi|289167592|ref|YP_003445861.1| ABC transporter, spermidine/putrescine-binding protein
[Streptococcus mitis B6]
gi|288907159|emb|CBJ21993.1| ABC transporter, spermidine/putrescine-binding protein
[Streptococcus mitis B6]
Length = 356
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 92/240 (38%), Gaps = 51/240 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 SIAVQLNLALLANQS---------------------AHHLKAFGI-GDVWVAVGWSSDVL 110
L +L + S A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDSQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAEILARFEFLEPLS 229
AL E + ++P+ L LP E + K A P AE + E E
Sbjct: 289 NALK-NAEYVGYSTPNLPAKEL--LPEEKKEDK--------AFYPDAETMKHLEVYEKFD 337
>gi|385260561|ref|ZP_10038705.1| ABC transporter, solute-binding protein [Streptococcus sp. SK140]
gi|385191111|gb|EIF38535.1| ABC transporter, solute-binding protein [Streptococcus sp. SK140]
Length = 356
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP + + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPNNQ-YSIPYFWGTLGIVYNETMVEE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
AL E + ++P+ + + LP E + K P DT
Sbjct: 289 NALK-NAEYVGYSTPNNVAKEM--LPEETKEDKSFYPDADT 326
>gi|344343930|ref|ZP_08774796.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
gi|343804541|gb|EGV22441.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
Length = 369
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 60/263 (22%)
Query: 11 GEIDPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 63
EIDP PY WGT + ++K R+ + P++ W ++ P++A R I++
Sbjct: 121 AEIDPDNAHLV-PYMWGTSGLGINRAKVREILGDEIPLDTWALVFDPQIAARLAGCGIAL 179
Query: 64 VNSPREVIGSIAVQL----------NLALLAN------------QSAHHLKAFGIGDVWV 101
++ P EV + L +L A S+ ++ GD+ +
Sbjct: 180 LDDPTEVFSAALAYLGKDPNSLERADLDAAAELIKGVYPHIRYFHSSQYISDLANGDLCI 239
Query: 102 AVGWSSDVLPAV-------KHMSNVAVVPKSGASLWADLWAIPAASRLETKQIGGRVRGL 154
A G+S DVL A K + + +P+ GA++W D+ AIP R
Sbjct: 240 AHGYSGDVLQAQERADEAGKGVEVIYRIPREGAAMWTDVMAIP------------RDAPN 287
Query: 155 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVP 214
H +I LQ A + + + A+P+ LE+T L L+ P + P
Sbjct: 288 PEAAHAFIAHLLQPA-VIAAVSDYVYYANPN-LEAT--ALVDAALREDPGI-------YP 336
Query: 215 PAEILARFEFLEPLSEATLSDMS 237
PAE+ AR S+ + D++
Sbjct: 337 PAEVKARLFVPNQRSDREIRDLN 359
>gi|325912734|ref|ZP_08175114.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 60-B]
gi|325477948|gb|EGC81080.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners
UPII 60-B]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 12 EIDPR--------GKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 63
IDP+ G + PY WGT+ I Y KF K I+ W DLW+ + +I +
Sbjct: 116 NIDPQFMNQSFDYGNKYSIPYFWGTLGIIYN-DKFVKK--GEIKHWNDLWKSKFKHQILL 172
Query: 64 VNSPREVIGSIAVQLNLALLANQS---------------------AHHLKAFGI-GDVWV 101
V+S R+++G + + ++ + S A LK + I + +
Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIADELKMYMIRNEASI 232
Query: 102 AVGWSSDVLPAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQ 160
V WS + + ++ VVP G++LW D IP ++ Q G +
Sbjct: 233 GVTWSGEARTMLNENPHLHYVVPSEGSNLWLDNIVIPKTAK---NQAGA---------YA 280
Query: 161 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGK 202
+I F L A + I A+P+ L L LP + K +
Sbjct: 281 FINFMLDPKNAAQ-NAKYIGYATPNMLAKKL--LPDSIKKDR 319
>gi|424923630|ref|ZP_18346991.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304790|gb|EJZ58752.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 366
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 37/164 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G PY +GTV+I + +K + + AP++ W +++PE + ++M++S
Sbjct: 121 DP-GNQYGVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDS 179
Query: 67 PREVI----------------------GSIAVQLNLALLANQSAHHLKAFGIGDVWVAVG 104
P E++ + +++ + SA ++ GD+ VA+G
Sbjct: 180 PSEILPLALHYLGLDPNSQNPADYEKAKDLMLKIRPYVTYFNSAKYMTDIANGDICVAIG 239
Query: 105 WSSDVLPA---VKHMSNVAVV----PKSGASLWADLWAIPAASR 141
+S K N VV PK GA +W D +AIP +++
Sbjct: 240 YSGSFYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|417986294|ref|ZP_12626866.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
32G]
gi|410526487|gb|EKQ01374.1| periplasmic substrate-binding component of an ABC superfamily
spermidine/putrescine transporter [Lactobacillus casei
32G]
Length = 261
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV----- 70
R + PY WGT+ I Y KF K + ++ W LW P+ I +++S R+V
Sbjct: 32 RNNKYSIPYFWGTLGIIYN-DKFVK--ASEVQHWDQLWNPKFKDSIMLIDSARDVFAPAL 88
Query: 71 --IGSIAVQLNLALLA------NQSAHHLKA---------FGIGDVWVAVGWS---SDVL 110
+G + N LA +Q + ++KA + +AV WS S++L
Sbjct: 89 ISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVADEIKMYMAENEAKIAVDWSGEASEML 148
Query: 111 PAVKHMSNVAVVPKSGASLWADLWAIPAASR 141
KH+ VVP+ G++LW D IP ++
Sbjct: 149 ANNKHLH--YVVPREGSNLWFDNLVIPKTAK 177
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNKY-AMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|239636394|ref|ZP_04677396.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
warneri L37603]
gi|239597749|gb|EEQ80244.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
warneri L37603]
Length = 357
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 16 RGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSIA 75
R + PY +GTV I Y K K+ + W+DL++ + + +V+ RE+IG
Sbjct: 128 RHNQYSLPYFFGTVGILYNKDKYPNESF---NSWQDLYKSKYKNEVLLVDGAREIIGLGL 184
Query: 76 VQLNLAL---------LANQSAHHL--KAFG-IGDVW----------VAVGWSSDVLPAV 113
+L +L A HHL + G +GD +AV WS P V
Sbjct: 185 NKLGYSLNDKNPQHIKKAESDLHHLAPQVRGVVGDEITMMLEQNEGSIAVVWSGVAAPLV 244
Query: 114 KHMSNVA-VVPKSGASLWADLWAIPAASR 141
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|308186216|ref|YP_003930347.1| spermidine/putrescine-binding periplasmic protein 2 [Pantoea vagans
C9-1]
gi|390433313|ref|ZP_10221851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea agglomerans IG1]
gi|308056726|gb|ADO08898.1| Spermidine/putrescine-binding periplasmic protein 2 precursor
[Pantoea vagans C9-1]
Length = 369
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 40/166 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA--------VVPKSGASLWADLWAIPAASR 141
GWS D+L A K+ ++ A VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQA-KNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 36/162 (22%)
Query: 12 EIDPRGKICAAPYRWGTVVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 65
++DP G A PY WGT I Y K + + I+ W ++ PE ++S ++
Sbjct: 107 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 165
Query: 66 SPREVIGSIAVQLNL----------------------ALLANQSAHHLKAFGIGDVWVAV 103
S E+I ++ L L + S+ ++ GD+ VA
Sbjct: 166 SADEMIPAVLNYLGLDPNSHKPEDIKRAEEQLLKVRPYVTYFHSSKYIGDLANGDICVAA 225
Query: 104 GWSSDVLPAVKHMS------NVAV-VPKSGASLWADLWAIPA 138
G+S D+L A N+A +PK G +LW D+ AIPA
Sbjct: 226 GFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 267
>gi|307706851|ref|ZP_07643653.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK321]
gi|307617724|gb|EFN96889.1| bacterial extracellular solute-binding family protein
[Streptococcus mitis SK321]
Length = 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 95/241 (39%), Gaps = 53/241 (21%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP G + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDP-GNKFSIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKNSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDTQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNV-AVVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPG-ELLKGKPSLDTNLIAGVPPAEILARFEFLEPL 228
AL E + ++P+ LP ELL + D A P AE + E E
Sbjct: 289 NALK-NAEYVGYSTPN--------LPAKELLPEEKKEDK---AFYPDAETMKHLEVYEKF 336
Query: 229 S 229
+
Sbjct: 337 N 337
>gi|398995885|ref|ZP_10698753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398128443|gb|EJM17832.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVI-- 71
A PY WG++ I + +K ++ AP W L++PE A + IS ++SP E++
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 72 --------------GSIA------VQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
G IA +++ ++ S+ ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQDKGQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHM----SNVAV---VPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A ++V + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAQESGNSVQIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGASPSA-LESTLVKLP 195
I + A A P E I PG+ PS + +TL +P
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPSQDVMATLYAIP 344
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATLLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|421169026|ref|ZP_15627073.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|404527872|gb|EKA38000.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
Length = 363
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 60/251 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G PY WGT IAY K R + AP++ W +++PE + ++ ++S
Sbjct: 118 DP-GNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDS 176
Query: 67 PREVIGSIAVQLNLALLANQSAHHLKA----------------------FGIGDVWVAVG 104
P EVI + L L+ ++Q + +A G+V VA+
Sbjct: 177 PTEVIPEVLHYLGLSPNSHQPEDYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIA 236
Query: 105 WSSDVLPAVKHMSNVAV-------VPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPL 157
WS + A +PK GA+ W D+ AIP ++ +Q
Sbjct: 237 WSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ----------- 284
Query: 158 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPGELLKGKPSLDTNLIAGVPPAE 217
H ++++ L+ P + + A+P+ L+ L+ P++ PP E
Sbjct: 285 AHAFLDYLLRPEVVAPI-SDYVAYANPNKAADGLI---SAELRDNPNV-------YPPEE 333
Query: 218 ILARFEFLEPL 228
+ AR +E L
Sbjct: 334 VQARLYSVEML 344
>gi|398894859|ref|ZP_10646897.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181740|gb|EJM69290.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 366
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 42/173 (24%)
Query: 5 LRRNDAGEIDPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-- 60
L RND G PY +GTV+I + +K + AP++ W +++PE +
Sbjct: 117 LDRNDPGNQ------YGVPYMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLK 170
Query: 61 ---ISMVNSPREVI----------------------GSIAVQLNLALLANQSAHHLKAFG 95
++M++SP E++ ++ +++ + SA ++
Sbjct: 171 ACGVAMLDSPSEILPLALHYLGLDPNSQNPDDYEKAKALMLKVRPYVTYFNSAKYMTDIA 230
Query: 96 IGDVWVAVGWSSDVLPA---VKHMSNVAVV----PKSGASLWADLWAIPAASR 141
GD+ VA+G+S K N VV PK GA +W D +AIP +++
Sbjct: 231 NGDICVAIGYSGSFYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 371
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + + AP+ W +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLALKPENLEKLKSCGVSFLDA 183
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 104 GWSSDVLPA------VKHMSNVAV-VPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|120599867|ref|YP_964441.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
gi|146292197|ref|YP_001182621.1| extracellular solute-binding protein [Shewanella putrefaciens
CN-32]
gi|386312872|ref|YP_006009037.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
gi|120559960|gb|ABM25887.1| extracellular solute-binding protein, family 1 [Shewanella sp.
W3-18-1]
gi|145563887|gb|ABP74822.1| extracellular solute-binding protein, family 1 [Shewanella
putrefaciens CN-32]
gi|319425497|gb|ADV53571.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
Length = 366
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 91/245 (37%), Gaps = 54/245 (22%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNS 66
DP G A PY WGT I Y K + AP + + ++ P+ A +I+ M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKIAKCGFAMLDS 179
Query: 67 PREVIGSIAVQLNL--------------ALLAN--------QSAHHLKAFGIGDVWVAVG 104
+++ + L L LL S+ ++ GD+ VA G
Sbjct: 180 ADDMVPQAMIYLGLDPNSAKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAYG 239
Query: 105 WSSDVLPAVKHMSNVA-------VVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGLSP 156
+S DV A +PK GA+LW D+ AIPA A +E
Sbjct: 240 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAKNIENA----------- 288
Query: 157 LIHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKLPGELLKGKPSLDTNLIAGV 213
H++I + L+ P V P L V+ + K LD I V
Sbjct: 289 --HKFINYLLRPEVIAPISNYVAYANPNDPAQPLVDEAVRTDPAIYPSKEVLDKLYIGEV 346
Query: 214 PPAEI 218
P +I
Sbjct: 347 RPLKI 351
>gi|186686044|ref|YP_001869240.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186468496|gb|ACC84297.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 361
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 71
DP + + P+ WGT + Y K + AP +DW LW+ + L R++++N REV+
Sbjct: 133 DPNNRY-SIPFNWGTTGLLYNSEKIKD---AP-QDWDYLWQNQEKLNQRMTLLNDVREVM 187
Query: 72 GSIAVQLNLALLAN------QSAHHLKAFG----------------IGDVWVAVGWSSDV 109
G+ L + + Q+ LK GD+ +A+ +S+D
Sbjct: 188 GATLRMLGYSYNSKNEQEIKQAYEKLKVLKPAIARFDTDAWQNQILAGDLLLAMCYSADA 247
Query: 110 LPAVKHMSNVA-VVPKSGASLWADLWAIPAAS 140
+ + + V+P+SG+SLW D IP +
Sbjct: 248 VKIAQENPKLKYVIPRSGSSLWTDTIVIPKTA 279
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP K A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNKY-AMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKPDDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 104 GWSSDVLPA------VKHMSNVA-VVPKSGASLWADLWAIPAASR 141
GW+ DV A K+ N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|421488388|ref|ZP_15935776.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK304]
gi|400367605|gb|EJP20620.1| ABC transporter, solute-binding protein [Streptococcus oralis
SK304]
Length = 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 46/221 (20%)
Query: 13 IDPRGKICAAPYRWGTVVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 72
DP K + PY WGT+ I Y ++ + AP E W DLW+PE I + + REV+G
Sbjct: 126 FDPGNKF-SIPYFWGTLGIVYNETMVDE---AP-EHWDDLWKPEYKDSIMLFDGAREVLG 180
Query: 73 ----SIAVQLN--------------LALLANQS---AHHLKAFGI-GDVWVAVGWSSDVL 110
S+ LN L N A +K + I + + V +S +
Sbjct: 181 LGLNSLGYSLNSKDPQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEAS 240
Query: 111 PAVKHMSNVA-VVPKSGASLWADLWAIPAASRLETKQIGGRVRGLSPLIHQWIEFCLQTA 169
++ N+ VVP ++LW D IP + + + +I F L+
Sbjct: 241 QMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAA------------YAFINFMLKPE 288
Query: 170 RALPFKQEVIPGASPSALESTLVKLPGELLKGK---PSLDT 207
AL E + A+P+ L LP E + K P DT
Sbjct: 289 NALK-NAEYVGYATPNNTAKEL--LPEETKEDKSFYPDADT 326
>gi|440757617|ref|ZP_20936800.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
gi|436428606|gb|ELP26260.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
Length = 369
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 40/166 (24%)
Query: 14 DPRGKICAAPYRWGTVVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 66
DP G A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 67 PREVIGSI-------------------AVQLNLALLAN----QSAHHLKAFGIGDVWVAV 103
P E+ ++ A L L L N S+ ++ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 104 GWSSDVLPAVKHMSNVA--------VVPKSGASLWADLWAIPAASR 141
GWS D+L A K+ ++ A VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQA-KNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|399001732|ref|ZP_10704442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398126856|gb|EJM16279.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 21 AAPYRWGTVVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGS 73
A PY WG++ I + +K ++ AP+ W L++PE A + IS ++SP E++ +
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 74 ----------------------IAVQLNLALLANQSAHHLKAFGIGDVWVAVGWSSDVLP 111
+ +++ ++ S+ ++ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSRDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 112 AVKHMSNVA-------VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGLSPLIHQW-- 161
A +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 246 AKARAQEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTN 305
Query: 162 -IEFCLQTARALPFKQEVI---PGA-SPSALESTLVKLP 195
I + A A P E I PG+ P A+ +TL +P
Sbjct: 306 SIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIP 344
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,870,563,102
Number of Sequences: 23463169
Number of extensions: 196573369
Number of successful extensions: 472725
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 2517
Number of HSP's that attempted gapping in prelim test: 468259
Number of HSP's gapped (non-prelim): 3230
length of query: 315
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 173
effective length of database: 9,027,425,369
effective search space: 1561744588837
effective search space used: 1561744588837
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)