Your job contains 1 sequence.
>036083
MVVVKAQRRVSARIQEKQREEKQREEKLRLVKRRVDLLTDEIIGNNGAAVDDGDVDDEEK
STINAFSKSNKRGRKVKDAENVEKEEEVEEEKLEKGKVSVESTSSGAELVDGNVVNFAEK
SDHAKVKETLRLFNKYYLQGVQEEEQRCCRIVEVDSKASKKSNKSKSKKGDVPEDEAKNK
AKRPDLKAVSKMMKNNEILYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMG
MSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGN
LALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRL
EGQPILTTNQVRFINGRVPQSLSEIRGYQKNCCLFRIVFMTSHI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036083
(404 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159133 - symbol:SUVH4 "SU(VAR)3-9 homolog 4" ... 809 4.0e-85 2
TAIR|locus:2065988 - symbol:SUVH6 "SU(VAR)3-9 homolog 6" ... 361 2.6e-37 3
TAIR|locus:2175289 - symbol:SUVH1 "SU(VAR)3-9 homolog 1" ... 390 1.5e-35 1
TAIR|locus:2032592 - symbol:SUVH3 "SU(VAR)3-9 homolog 3" ... 388 2.4e-35 1
TAIR|locus:2063384 - symbol:SUVH5 "SU(VAR)3-9 homolog 5" ... 350 2.7e-35 2
TAIR|locus:2140827 - symbol:SUVH9 "SU(VAR)3-9 homolog 9" ... 362 1.5e-32 1
TAIR|locus:2051083 - symbol:SUVH2 "SU(VAR)3-9 homolog 2" ... 335 1.4e-29 1
TAIR|locus:2151997 - symbol:AT5G47150 species:3702 "Arabi... 309 1.3e-27 1
TAIR|locus:2171574 - symbol:AT5G47160 species:3702 "Arabi... 306 2.8e-27 1
TAIR|locus:2030953 - symbol:SUVH7 "SU(VAR)3-9 homolog 7" ... 281 1.2e-23 1
TAIR|locus:2047266 - symbol:SDG21 "SET domain group 21" s... 255 8.6e-21 1
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 159 1.3e-17 2
UNIPROTKB|F6UA42 - symbol:uhrf1 "E3 ubiquitin-protein lig... 158 2.7e-17 2
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 154 5.3e-17 2
UNIPROTKB|A7E320 - symbol:UHRF1 "E3 ubiquitin-protein lig... 159 1.2e-16 2
UNIPROTKB|Q96T88 - symbol:UHRF1 "E3 ubiquitin-protein lig... 148 1.6e-16 2
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 154 2.3e-16 2
UNIPROTKB|F1S7K1 - symbol:UHRF1 "Uncharacterized protein"... 153 5.0e-16 2
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 147 2.2e-15 2
TAIR|locus:2009420 - symbol:VIM1 "AT1G57820" species:3702... 214 5.6e-15 1
TAIR|locus:2064676 - symbol:SDG11 "SET domain protein 11"... 190 5.9e-13 1
TAIR|locus:2164835 - symbol:VIM3 "VARIANT IN METHYLATION ... 190 3.9e-12 1
TAIR|locus:2013800 - symbol:VIM4 "VARIANT IN METHYLATION ... 183 2.5e-11 1
TAIR|locus:2013840 - symbol:VIM2 "VARIANT IN METHYLATION ... 183 2.5e-11 1
TAIR|locus:2009425 - symbol:VIM5 "VARIANT IN METHYLATION ... 154 5.6e-08 1
TAIR|locus:2138591 - symbol:ORTHL "ORTHRUS-like" species:... 149 1.2e-07 1
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 151 1.6e-07 1
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 151 1.6e-07 1
MGI|MGI:1338889 - symbol:Uhrf1 "ubiquitin-like, containin... 150 2.0e-07 1
RGD|1595855 - symbol:Uhrf1 "ubiquitin-like with PHD and r... 149 2.5e-07 1
UNIPROTKB|F1MFX7 - symbol:F1MFX7 "Uncharacterized protein... 146 5.3e-07 1
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 145 7.4e-07 1
UNIPROTKB|E2RKA4 - symbol:UHRF2 "Uncharacterized protein"... 145 7.4e-07 1
UNIPROTKB|F1NS44 - symbol:F1NS44 "Uncharacterized protein... 142 1.5e-06 1
>TAIR|locus:2159133 [details] [associations]
symbol:SUVH4 "SU(VAR)3-9 homolog 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0018022 "peptidyl-lysine methylation"
evidence=IDA] [GO:0046974 "histone methyltransferase activity
(H3-K9 specific)" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA;IMP] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006270 "DNA replication
initiation" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775 GO:GO:0008270
EMBL:AB005230 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0046974 GO:GO:0010216 GO:GO:0008327 KO:K11420 GO:GO:0010385
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000238382 EMBL:AF344447 EMBL:AF538715 EMBL:BT002313
IPI:IPI00540897 RefSeq:NP_196900.1 UniGene:At.8330
ProteinModelPortal:Q8GZB6 SMR:Q8GZB6 STRING:Q8GZB6 PaxDb:Q8GZB6
PRIDE:Q8GZB6 EnsemblPlants:AT5G13960.1 GeneID:831244
KEGG:ath:AT5G13960 TAIR:At5g13960 InParanoid:Q8GZB6 OMA:DCEGDCA
PhylomeDB:Q8GZB6 ProtClustDB:CLSN2916622 Genevestigator:Q8GZB6
GermOnline:AT5G13960 Uniprot:Q8GZB6
Length = 624
Score = 809 (289.8 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 146/208 (70%), Positives = 175/208 (84%)
Query: 180 KAKRPDLKAVSKMMKNNEILYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYM 239
K RPDLK V++M+K ILY K IGD+PG+ VGH+F+SRAEM AVGFH+HWLNGIDYM
Sbjct: 123 KLSRPDLKGVTEMIKAKAILYPRKIIGDLPGIDVGHRFFSRAEMCAVGFHNHWLNGIDYM 182
Query: 240 GMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERG 299
M Y+ +Y NY PLAV+IV+SG YEDDLDNA+ V YTGQGGHNLTG+KRQI+DQ LERG
Sbjct: 183 SMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKRQIKDQLLERG 242
Query: 300 NLALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRR 359
NLALK+C + ++PVRV RGH+C SSYT +VYTYDGLYKV K+WA+KG+SGFTV+KYRL+R
Sbjct: 243 NLALKHCCEYNVPVRVTRGHNCKSSYTKRVYTYDGLYKVEKFWAQKGVSGFTVYKYRLKR 302
Query: 360 LEGQPILTTNQVRFINGRVPQSLSEIRG 387
LEGQP LTT+QV F+ GR+P S SEI G
Sbjct: 303 LEGQPELTTDQVNFVAGRIPTSTSEIEG 330
Score = 62 (26.9 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 110 VDGNVVNFAEKSDHAKVKETLRLFNKYYLQGVQEEEQR 147
++G VN H KV + LRLFNK YL VQ + R
Sbjct: 92 LNGKDVNL---EPHLKVTKCLRLFNKQYLLCVQAKLSR 126
>TAIR|locus:2065988 [details] [associations]
symbol:SUVH6 "SU(VAR)3-9 homolog 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IDA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000775 GO:GO:0008270 EMBL:AC006340
GO:GO:0008168 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0016571 GO:GO:0008327 KO:K11420
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000154454 ProtClustDB:CLSN2683680 EMBL:AF344449
EMBL:AY065374 EMBL:BT002751 IPI:IPI00541041 PIR:C84616
RefSeq:NP_850030.1 RefSeq:NP_973514.1 UniGene:At.28511
ProteinModelPortal:Q8VZ17 SMR:Q8VZ17 PaxDb:Q8VZ17 PRIDE:Q8VZ17
EnsemblPlants:AT2G22740.1 EnsemblPlants:AT2G22740.2 GeneID:816804
KEGG:ath:AT2G22740 TAIR:At2g22740 InParanoid:Q8VZ17 OMA:RRIGNDE
PhylomeDB:Q8VZ17 Genevestigator:Q8VZ17 GermOnline:AT2G22740
Uniprot:Q8VZ17
Length = 790
Score = 361 (132.1 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 90/222 (40%), Positives = 129/222 (58%)
Query: 173 PEDEA-KNKAKRPDLKAVSKMMKNNEILYSAKRI-GDIPGVHVGHQFYSRAEMVAVGFHS 230
PED+ K K R D +A + + +N + L S I G++PGV VG +F R E+ +G H
Sbjct: 295 PEDQRRKGKGLRIDFEASTILKRNGKFLNSGVHILGEVPGVEVGDEFQYRMELNILGIHK 354
Query: 231 HWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLT----G 286
GIDYM Y G K +A +IV SG Y+D LDN++ + YTGQGG+ + G
Sbjct: 355 PSQAGIDYM--KY-GKAK-----VATSIVASGGYDDHLDNSDVLTYTGQGGNVMQVKKKG 406
Query: 287 DK-RQIRDQKLERGNLALKNCVDQDLPVRVIRG-HDCSSSYT-GKVYTYDGLYKVVKYWA 343
++ ++ DQKL GNLAL +++ PVRVIRG H + + G Y YDGLY V KYW
Sbjct: 407 EELKEPEDQKLITGNLALATSIEKQTPVRVIRGKHKSTHDKSKGGNYVYDGLYLVEKYWQ 466
Query: 344 EKGLSGFTVFKYRLRRLEGQPILTTNQVRFINGRVPQSLSEI 385
+ G G VFK++LRR+ GQP L+ +V+ + + L ++
Sbjct: 467 QVGSHGMNVFKFQLRRIPGQPELSWVEVKKSKSKYREGLCKL 508
Score = 55 (24.4 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 121 SDHAKVKETLRLFNKYYLQGVQEEEQR 147
S KVKETLRLF+ + +QE+E +
Sbjct: 268 SSRNKVKETLRLFHGVCRKILQEDEAK 294
Score = 38 (18.4 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 102 STSSGAELVDGNVVNFAEKS 121
S+SSG E + ++V +A++S
Sbjct: 155 SSSSGTENIVRDIVVYADES 174
>TAIR|locus:2175289 [details] [associations]
symbol:SUVH1 "SU(VAR)3-9 homolog 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775
GO:GO:0008270 EMBL:AB005245 eggNOG:COG2940 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0040029
KO:K11420 Gene3D:2.30.280.10 EMBL:AF344444 IPI:IPI00548211
RefSeq:NP_196113.1 RefSeq:NP_850767.1 UniGene:At.8375
ProteinModelPortal:Q9FF80 SMR:Q9FF80 PaxDb:Q9FF80 PRIDE:Q9FF80
EnsemblPlants:AT5G04940.1 EnsemblPlants:AT5G04940.2 GeneID:830376
KEGG:ath:AT5G04940 TAIR:At5g04940 HOGENOM:HOG000238382
InParanoid:Q9FF80 OMA:RENGNRE PhylomeDB:Q9FF80
ProtClustDB:CLSN2686453 Genevestigator:Q9FF80 GermOnline:AT5G04940
Uniprot:Q9FF80
Length = 670
Score = 390 (142.3 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 88/183 (48%), Positives = 115/183 (62%)
Query: 182 KRPDLKAVSKMMKNNEILYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGM 241
KRPDLK+ S M + KR G +PGV +G F+ R EM VG HS + GIDY+ +
Sbjct: 187 KRPDLKSGSTCMGRGVRTNTKKRPGIVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVV 246
Query: 242 SYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNL 301
KG+ + P+A +IV SG Y++D N + ++YTGQGG N DK Q DQKLERGNL
Sbjct: 247 --KGETEEE--PIATSIVSSGYYDNDEGNPDVLIYTGQGG-NADKDK-QSSDQKLERGNL 300
Query: 302 ALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLE 361
AL+ + +D VRVIRG +S+ K+Y YDGLY++ + W EKG SG FKY+L R
Sbjct: 301 ALEKSLRRDSAVRVIRGLK-EASHNAKIYIYDGLYEIKESWVEKGKSGHNTFKYKLVRAP 359
Query: 362 GQP 364
GQP
Sbjct: 360 GQP 362
>TAIR|locus:2032592 [details] [associations]
symbol:SUVH3 "SU(VAR)3-9 homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005694 "chromosome"
evidence=IDA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR003105
InterPro:IPR003606 InterPro:IPR007728 InterPro:IPR025794
Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280 PROSITE:PS50867
PROSITE:PS51015 SMART:SM00317 SMART:SM00466 SMART:SM00468
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005694
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 GO:GO:0042054
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
EMBL:AC008017 GO:GO:0040029 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344446 EMBL:AY099620
EMBL:BT002137 IPI:IPI00533947 PIR:F96756 RefSeq:NP_565056.1
UniGene:At.11687 UniGene:At.43232 ProteinModelPortal:Q9C5P4
SMR:Q9C5P4 IntAct:Q9C5P4 PaxDb:Q9C5P4 PRIDE:Q9C5P4
EnsemblPlants:AT1G73100.1 GeneID:843641 KEGG:ath:AT1G73100
TAIR:At1g73100 InParanoid:Q9C5P4 OMA:IHIAFFA PhylomeDB:Q9C5P4
ProtClustDB:CLSN2917436 Genevestigator:Q9C5P4 GermOnline:AT1G73100
Uniprot:Q9C5P4
Length = 669
Score = 388 (141.6 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 84/179 (46%), Positives = 111/179 (62%)
Query: 187 KAVSKMMKNNEILYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGD 246
KA +M N KR+G +PG+ VG F+SR EM VG H + GIDY+ +S G
Sbjct: 189 KAAGTLMSNGVRTNMKKRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYI-ISKAGS 247
Query: 247 YKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDK-RQIRDQKLERGNLALKN 305
+ LA +IV SG YE + + E ++Y+GQGG+ DK RQ DQKLERGNLAL+N
Sbjct: 248 DEE---SLATSIVSSGRYEGEAQDPESLIYSGQGGN---ADKNRQASDQKLERGNLALEN 301
Query: 306 CVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
+ + VRV+RG + ++S TGK+Y YDGLY + + W EKG SG FKY+L R GQP
Sbjct: 302 SLRKGNGVRVVRGEEDAASKTGKIYIYDGLYSISESWVEKGKSGCNTFKYKLVRQPGQP 360
>TAIR|locus:2063384 [details] [associations]
symbol:SUVH5 "SU(VAR)3-9 homolog 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS;IDA] [GO:0010216
"maintenance of DNA methylation" evidence=IGI] [GO:0016571 "histone
methylation" evidence=RCA;IDA] [GO:0031048 "chromatin silencing by
small RNA" evidence=IEP;RCA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0051567 "histone
H3-K9 methylation" evidence=RCA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0010200 GO:GO:0031048
EMBL:AC004667 GO:GO:0042054 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0010216 KO:K11420
eggNOG:COG3440 Gene3D:2.30.280.10 EMBL:AF344448 EMBL:AY062735
EMBL:BT003374 IPI:IPI00526239 PIR:D84765 RefSeq:NP_181061.1
UniGene:At.12724 PDB:3Q0B PDB:3Q0C PDB:3Q0D PDB:3Q0F PDBsum:3Q0B
PDBsum:3Q0C PDBsum:3Q0D PDBsum:3Q0F ProteinModelPortal:O82175
SMR:O82175 IntAct:O82175 PaxDb:O82175 PRIDE:O82175
EnsemblPlants:AT2G35160.1 GeneID:818083 KEGG:ath:AT2G35160
TAIR:At2g35160 HOGENOM:HOG000154454 InParanoid:O82175 OMA:YLVEEYW
PhylomeDB:O82175 ProtClustDB:CLSN2683680 EvolutionaryTrace:O82175
Genevestigator:O82175 GermOnline:AT2G35160 Uniprot:O82175
Length = 794
Score = 350 (128.3 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 92/210 (43%), Positives = 123/210 (58%)
Query: 174 EDEAK-NKAKRPDLKAV---SKMMKNN-EILYSAKRI-GDIPGVHVGHQFYSRAEMVAVG 227
E+EA+ K + K V SK++K+ + LYS +I G +PGV VG +F R E+ +G
Sbjct: 327 EEEARPRKRDGGNFKVVCEASKILKSKGKNLYSGTQIIGTVPGVEVGDEFQYRMELNLLG 386
Query: 228 FHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGD 287
H +GIDYM K D + A +IV SG Y D LDN++ ++YTGQGG+ G
Sbjct: 387 IHRPSQSGIDYM----KDDGGELV---ATSIVSSGGYNDVLDNSDVLIYTGQGGN--VGK 437
Query: 288 KRQI---RDQKLERGNLALKNCVDQDLPVRVIRG---HDCSSSYTGKVYTYDGLYKVVKY 341
K+ +DQ+L GNLALKN +++ PVRVIRG SS K Y YDGLY V +Y
Sbjct: 438 KKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVVAKNYVYDGLYLVEEY 497
Query: 342 WAEKGLSGFTVFKYRLRRLEGQPILTTNQV 371
W E G G VFK++LRR+ GQP L +V
Sbjct: 498 WEETGSHGKLVFKFKLRRIPGQPELPWKEV 527
Score = 66 (28.3 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 104 SSGAELVDGNVVNFAEKSDHA--KVKETLRLFNKYYLQGVQEEEQR 147
+S L +G + + + D A KVKET+RLF++ + +QEEE R
Sbjct: 286 ASKFRLSNGGLPSCSSSGDSARYKVKETMRLFHETCKKIMQEEEAR 331
>TAIR|locus:2140827 [details] [associations]
symbol:SUVH9 "SU(VAR)3-9 homolog 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0009294 "DNA mediated
transformation" evidence=IMP] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0000775 GO:GO:0008270 EMBL:AL049656 EMBL:AL161536
GO:GO:0009294 GO:GO:0018024 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 ProtClustDB:CLSN2685938
EMBL:AF344452 IPI:IPI00529277 PIR:T06648 RefSeq:NP_001031625.1
RefSeq:NP_193082.1 UniGene:At.3118 ProteinModelPortal:Q9T0G7
SMR:Q9T0G7 STRING:Q9T0G7 PRIDE:Q9T0G7 EnsemblPlants:AT4G13460.1
EnsemblPlants:AT4G13460.2 GeneID:826978 KEGG:ath:AT4G13460
TAIR:At4g13460 InParanoid:Q9T0G7 OMA:EGQAEMG PhylomeDB:Q9T0G7
Genevestigator:Q9T0G7 GermOnline:AT4G13460 Uniprot:Q9T0G7
Length = 650
Score = 362 (132.5 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 85/211 (40%), Positives = 124/211 (58%)
Query: 183 RPDLKA--VSKMMKNNEILYSA-KRI-GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDY 238
R D KA MM++ + + KRI G IPGV VG F+ R E+ +G H H +GID+
Sbjct: 178 RADGKAGKAGSMMRDCMLWMNRDKRIVGSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDF 237
Query: 239 MGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLER 298
+ S + + P+A ++++SG YEDD D + ++YTGQGG + G RQ Q+LE
Sbjct: 238 LTGSLSSNGE----PIATSVIVSGGYEDDDDQGDVIMYTGQGGQDRLG--RQAEHQRLEG 291
Query: 299 GNLALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLR 358
GNLA++ + + VRVIRG + + +VY YDGL+++V W + G SGF VFKYRL
Sbjct: 292 GNLAMERSMYYGIEVRVIRGLKYENEVSSRVYVYDGLFRIVDSWFDVGKSGFGVFKYRLE 351
Query: 359 RLEGQPILTTNQVRFINGRVPQSLS-EIRGY 388
R+EGQ + ++ ++F LS RGY
Sbjct: 352 RIEGQAEMGSSVLKFARTLKTNPLSVRPRGY 382
>TAIR|locus:2051083 [details] [associations]
symbol:SUVH2 "SU(VAR)3-9 homolog 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=IMP;TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0005720 GO:GO:0042054
GO:GO:0018024 GO:GO:0040029 EMBL:AC002332 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344445
IPI:IPI00548715 PIR:F84743 RefSeq:NP_180887.1 UniGene:At.12115
ProteinModelPortal:O22781 SMR:O22781 STRING:O22781
EnsemblPlants:AT2G33290.1 GeneID:817892 KEGG:ath:AT2G33290
TAIR:At2g33290 InParanoid:O22781 OMA:FEYLARP PhylomeDB:O22781
ProtClustDB:CLSN2685938 Genevestigator:O22781 GermOnline:AT2G33290
Uniprot:O22781
Length = 651
Score = 335 (123.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 80/213 (37%), Positives = 115/213 (53%)
Query: 178 KNKAKRPDLKAVSKMMKNNEIL-YSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGI 236
+ + +R D+ A M L Y +G + GV VG F+ R E+ +G H GI
Sbjct: 178 QGRRRRSDMAAAYIMRDRGLWLNYDKHIVGPVTGVEVGDIFFYRMELCVLGLHGQTQAGI 237
Query: 237 DYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKL 296
D + + P+A +IV+SG YEDD D + +VYTG GG + +Q +Q+L
Sbjct: 238 DCLTAERSATGE----PIATSIVVSGGYEDDEDTGDVLVYTGHGGQD--HQHKQCDNQRL 291
Query: 297 ERGNLALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYR 356
GNL ++ + + VRVIRG +S + KVY YDGLYK+V +W G SGF VFK+R
Sbjct: 292 VGGNLGMERSMHYGIEVRVIRGIKYENSISSKVYVYDGLYKIVDWWFAVGKSGFGVFKFR 351
Query: 357 LRRLEGQPILTTNQVRFING-RVPQSLSEIRGY 388
L R+EGQP++ + +RF R S+ GY
Sbjct: 352 LVRIEGQPMMGSAVMRFAQTLRNKPSMVRPTGY 384
>TAIR|locus:2151997 [details] [associations]
symbol:AT5G47150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR003105 Pfam:PF02182 PROSITE:PS51015
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB025609
EMBL:AB018117 eggNOG:COG3440 Gene3D:2.30.280.10 IPI:IPI00521351
RefSeq:NP_199526.1 UniGene:At.29911 ProteinModelPortal:Q9FHI0
SMR:Q9FHI0 DNASU:834761 EnsemblPlants:AT5G47150.1 GeneID:834761
KEGG:ath:AT5G47150 TAIR:At5g47150 HOGENOM:HOG000152471
InParanoid:Q9FHI0 OMA:YATSSHR PhylomeDB:Q9FHI0
ProtClustDB:CLSN2914894 Genevestigator:Q9FHI0 Uniprot:Q9FHI0
Length = 328
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/186 (39%), Positives = 111/186 (59%)
Query: 183 RPDLKAVSKMMKNNEILYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMS 242
R DLK ++ + K + + + KRIG +PG+++G F + E+ VG HS + GIDY+ +
Sbjct: 153 RIDLKTLTVLEKMGKQVNTEKRIGSVPGINIGDVFQYKTELRVVGLHSKPMCGIDYIKL- 211
Query: 243 YKGDYKNYIFPLAVAIVLSGMYE-DDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNL 301
GD + + +IV S Y +D N+ +VYTG+GG N+ +++ DQKL +GNL
Sbjct: 212 --GDDR-----ITTSIVASEGYGYNDTYNSGVMVYTGEGG-NVINKQKKTEDQKLVKGNL 263
Query: 302 ALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLE 361
AL + Q VRVIRG + GK Y YDGLY V +YW E+ + G +V+K++L R+
Sbjct: 264 ALATSMRQKSQVRVIRGEE-RLDRKGKRYVYDGLYMVEEYWVERDVRGKSVYKFKLCRIP 322
Query: 362 GQPILT 367
GQ LT
Sbjct: 323 GQLPLT 328
>TAIR|locus:2171574 [details] [associations]
symbol:AT5G47160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR003105 Pfam:PF02182 PROSITE:PS51015
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
eggNOG:COG3440 Gene3D:2.30.280.10 EMBL:DQ447048 EMBL:DQ653354
IPI:IPI00535555 RefSeq:NP_199527.1 UniGene:At.55414
ProteinModelPortal:Q9LVU3 SMR:Q9LVU3 EnsemblPlants:AT5G47160.1
GeneID:834762 KEGG:ath:AT5G47160 TAIR:At5g47160
HOGENOM:HOG000153146 InParanoid:Q9LVU3 OMA:GDRFIND PhylomeDB:Q9LVU3
ProtClustDB:CLSN2914896 Genevestigator:Q9LVU3 Uniprot:Q9LVU3
Length = 415
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 71/161 (44%), Positives = 98/161 (60%)
Query: 201 SAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVL 260
S KRIG +PG+ VG + +A + +G H ++GIDYM YKG+ + +A +IV
Sbjct: 257 SQKRIGSVPGIKVGDKIQFKAALSVIGLHFGIMSGIDYM---YKGNKE-----VATSIVS 308
Query: 261 S--GMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCVDQDLPVRVIRG 318
S Y D N + ++Y GQGG+ + D + I+DQKL GNLAL N + + PVRVIRG
Sbjct: 309 SEGNDYGDRFIN-DVMIYCGQGGNMRSKDHKAIKDQKLVGGNLALANSIKEKTPVRVIRG 367
Query: 319 HDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRR 359
+ GK Y YDGLY+V KYW E+G G +FK++LRR
Sbjct: 368 ERRLDN-RGKDYVYDGLYRVEKYWEERGPQGNILFKFKLRR 407
>TAIR|locus:2030953 [details] [associations]
symbol:SUVH7 "SU(VAR)3-9 homolog 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR007728 InterPro:IPR017956
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00384
SMART:SM00466 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 EMBL:AC034106
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
KO:K11420 eggNOG:COG3440 Gene3D:2.30.280.10 HOGENOM:HOG000238382
EMBL:AF344450 IPI:IPI00542064 PIR:G86312 RefSeq:NP_564036.1
UniGene:At.15818 ProteinModelPortal:Q9C5P1 SMR:Q9C5P1 PaxDb:Q9C5P1
PRIDE:Q9C5P1 EnsemblPlants:AT1G17770.1 GeneID:838355
KEGG:ath:AT1G17770 TAIR:At1g17770 InParanoid:Q9C5P1 OMA:QVSEFIN
PhylomeDB:Q9C5P1 ProtClustDB:CLSN2687844 Genevestigator:Q9C5P1
GermOnline:AT1G17770 Uniprot:Q9C5P1
Length = 693
Score = 281 (104.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 60/162 (37%), Positives = 93/162 (57%)
Query: 203 KRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSG 262
+RIG +PG+HVG FY EM VG H GID+ + + + + A+ +V +G
Sbjct: 224 RRIGAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAA-ESAVEGHA---AMCVVTAG 279
Query: 263 MYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCVDQDLPVRVIRGHDCS 322
Y+ + + + ++Y+GQGG ++ G+ R DQ+++ GNLAL+ V + VRV+RG
Sbjct: 280 QYDGETEGLDTLIYSGQGGTDVYGNAR---DQEMKGGNLALEASVSKGNDVRVVRGVIHP 336
Query: 323 SSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
K+Y YDG+Y V K+W G SGF F+++L R QP
Sbjct: 337 HENNQKIYIYDGMYLVSKFWTVTGKSGFKEFRFKLVRKPNQP 378
>TAIR|locus:2047266 [details] [associations]
symbol:SDG21 "SET domain group 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=TAS] [GO:0042054 "histone methyltransferase
activity" evidence=ISS] [GO:0008361 "regulation of cell size"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR003105
InterPro:IPR003606 InterPro:IPR007728 InterPro:IPR017956
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00384
SMART:SM00466 SMART:SM00468 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000775 GO:GO:0003677 GO:GO:0008270
GO:GO:0042054 EMBL:AC007266 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0040029 KO:K11420
eggNOG:COG3440 Gene3D:2.30.280.10 HOGENOM:HOG000238382
ProtClustDB:CLSN2687844 EMBL:AF344451 IPI:IPI00524236 PIR:C84640
RefSeq:NP_180049.2 UniGene:At.66241 ProteinModelPortal:Q9C5P0
SMR:Q9C5P0 STRING:Q9C5P0 PaxDb:Q9C5P0 PRIDE:Q9C5P0
EnsemblPlants:AT2G24740.1 GeneID:817010 KEGG:ath:AT2G24740
TAIR:At2g24740 InParanoid:Q9C5P0 OMA:NEEAHAT PhylomeDB:Q9C5P0
Genevestigator:Q9C5P0 GermOnline:AT2G24740 Uniprot:Q9C5P0
Length = 755
Score = 255 (94.8 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 65/162 (40%), Positives = 87/162 (53%)
Query: 203 KRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSG 262
+RIG IPGV VG FY EM VG H + GID + G P A ++V SG
Sbjct: 307 RRIGPIPGVQVGDIFYYWCEMCLVGLHRNTAGGIDSLLAKESG----VDGPAATSVVTSG 362
Query: 263 MYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCVDQDLPVRVIRGHDCS 322
Y+++ ++ E ++Y+G GG DQ L+RGN AL+ V + VRVIRG +
Sbjct: 363 KYDNETEDLETLIYSGHGGKPC--------DQVLQRGNRALEASVRRRNEVRVIRGELYN 414
Query: 323 SSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
+ KVY YDGLY V W G SGF ++++L R GQP
Sbjct: 415 NE---KVYIYDGLYLVSDCWQVTGKSGFKEYRFKLLRKPGQP 453
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 159 (61.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 48/135 (35%), Positives = 70/135 (51%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + ++ E + + G IPGV VG + R ++ G H + G
Sbjct: 387 ANSSSQRDWGKGMACVGRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAG 446
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+DN + YTG GG +L+G+KR Q
Sbjct: 447 IH--GRSNDGSY---------SLVLAGGYEDDVDNGNEFTYTGSGGRDLSGNKRTAEQSC 495
Query: 293 DQKLERGNLALK-NC 306
DQKL N AL NC
Sbjct: 496 DQKLSNMNRALALNC 510
Score = 131 (51.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 312 PVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R G S + YDG+YKVVKYW EKG SGF V++Y LRR + +P
Sbjct: 530 PVRVVRNSKGRKHSKYAPEEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDYEP 585
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 158 (60.7 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 48/135 (35%), Positives = 70/135 (51%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + ++ E + + G IPGV VG + R ++ G H + G
Sbjct: 389 ASSSSQRDWGKGMACVGRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAG 448
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+DN + YTG GG +L+G+KR Q
Sbjct: 449 IH--GRSNDGSY---------SLVLAGGYEDDVDNGSEFTYTGSGGRDLSGNKRTAEQSC 497
Query: 293 DQKLERGNLALK-NC 306
DQKL N AL NC
Sbjct: 498 DQKLTNMNRALALNC 512
Score = 129 (50.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 312 PVRVIRGHDCS--SSYTGKVYT-YDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R S Y + YDG+YKVVKYW EKG SGF V++Y LRR + +P
Sbjct: 532 PVRVVRNTKGKKHSKYAPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDEEP 587
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 154 (59.3 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 50/157 (31%), Positives = 76/157 (48%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + + G IPG+ VG + R ++ G H + G
Sbjct: 392 ATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAG 451
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+D+ YTG GG +L+G+KR Q
Sbjct: 452 IH--GRSNDGAY---------SLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSC 500
Query: 293 DQKLERGNLALK-NCVDQDLPVRVIRGHDCSSSYTGK 328
DQKL N AL NC P+ +G + +GK
Sbjct: 501 DQKLTNTNRALALNC---SAPINDRKGAEAKDWRSGK 534
Score = 131 (51.2 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 312 PVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R G S + YDG+YKVV+YW EKG SGF V++Y LRR + +P
Sbjct: 535 PVRVVRNVKGRKHSKYAPAEGNRYDGIYKVVRYWPEKGKSGFLVWRYLLRRDDTEP 590
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 159 (61.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 50/157 (31%), Positives = 77/157 (49%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + + G IPG+ VG + R ++ G H + G
Sbjct: 393 ATSSSQRDWGKGMACVGRTKECTIVPSNHFGPIPGIPVGTMWRFRVQVSESGVHRPHVAG 452
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+D+ YTG GG +L+G+KR Q
Sbjct: 453 IH--GRSNHGAY---------SLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSC 501
Query: 293 DQKLERGNLALK-NCVDQDLPVRVIRGHDCSSSYTGK 328
DQKL N AL NC P+ ++G + +GK
Sbjct: 502 DQKLTNTNRALALNCF---APINDLKGAEAKDWRSGK 535
Score = 122 (48.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 312 PVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R G S + YDG+YKVV+YW EKG SGF V+++ LRR + +P
Sbjct: 536 PVRVVRNVKGRKHSKYAPIEGNRYDGIYKVVRYWPEKGKSGFLVWRFLLRRDDVEP 591
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 148 (57.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 50/157 (31%), Positives = 75/157 (47%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + + G IPG+ VG + R ++ G H + G
Sbjct: 389 ATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAG 448
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+D+ YTG GG +L+G+KR Q
Sbjct: 449 IH--GRSNDGAY---------SLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSC 497
Query: 293 DQKLERGNLALK-NCVDQDLPVRVIRGHDCSSSYTGK 328
DQKL N AL NC P+ G + +GK
Sbjct: 498 DQKLTNTNRALALNCF---APINDQEGAEAKDWRSGK 531
Score = 133 (51.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 312 PVRVIRG--HDCSSSYT-GKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R +S Y + YDG+YKVVKYW EKG SGF V++Y LRR + +P
Sbjct: 532 PVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEP 587
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 154 (59.3 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 51/156 (32%), Positives = 73/156 (46%)
Query: 179 NKAKRPDL-KAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNGI 236
N + R D K ++ + + E + + G IPG+ VG + R ++ G H + GI
Sbjct: 346 NSSSRRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWKFRVQVSESGVHRPHVAGI 405
Query: 237 DYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIRD 293
G S G Y ++VL+G YEDD+D+ YTG GG +L+G+KR Q D
Sbjct: 406 H--GRSNDGAY---------SLVLAGGYEDDIDHGNSFTYTGSGGRDLSGNKRTAEQSCD 454
Query: 294 QKLERGNLALK-NCVDQDLPVRVIRGHDCSSSYTGK 328
QKL N AL NC P+ G + GK
Sbjct: 455 QKLTNMNRALALNC---SAPINDKNGAEAKDWRAGK 487
Score = 124 (48.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 312 PVRVIRG-----HDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQPIL 366
PVRV+R H + G YDG+YKVVKYW E G SGF V++Y LRR + +P
Sbjct: 488 PVRVVRNVKGGKHSKYAPVEGN--RYDGIYKVVKYWPETGKSGFLVWRYLLRRDDEEPAP 545
Query: 367 TTNQ 370
T +
Sbjct: 546 WTKE 549
>UNIPROTKB|F1S7K1 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0031493 "nucleosomal histone binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0000792 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:CU681848
Ensembl:ENSSSCT00000014764 Uniprot:F1S7K1
Length = 813
Score = 153 (58.9 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 50/157 (31%), Positives = 76/157 (48%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + + G IPG+ VG + R ++ G H + G
Sbjct: 405 ATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAG 464
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR---QIR 292
I G S G Y ++VL+G YEDD+D+ YTG GG +L+G+KR Q
Sbjct: 465 IH--GRSNDGAY---------SLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSC 513
Query: 293 DQKLERGNLALK-NCVDQDLPVRVIRGHDCSSSYTGK 328
DQKL N AL NC P+ +G + +GK
Sbjct: 514 DQKLTNTNRALALNCF---APINDRKGAEAKDWRSGK 547
Score = 123 (48.4 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 312 PVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R G S + YDG+YKVV+YW EKG SGF V+++ LRR + +P
Sbjct: 548 PVRVVRNVKGRKHSKYAPVEGNRYDGIYKVVRYWPEKGKSGFLVWRFLLRRDDVEP 603
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 147 (56.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 42/105 (40%), Positives = 56/105 (53%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G +PGV VG + R ++ G H + GI G S G Y ++VL+G YE
Sbjct: 417 GPVPGVPVGTLWKFRVQVSESGVHRPHVAGIH--GRSNDGAY---------SLVLAGGYE 465
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NC 306
DD+D+ + YTG GG +L+G+KR Q DQKL N AL NC
Sbjct: 466 DDVDDGNEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNC 510
Score = 123 (48.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 28/53 (52%), Positives = 33/53 (62%)
Query: 312 PVRVIRG-----HDCSSSYTGKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRR 359
PVRV+R H S G YDG+YKVVKYW EKG SGF V++Y L+R
Sbjct: 530 PVRVVRSSKGRKHSKYSPEDGN--RYDGIYKVVKYWPEKGKSGFLVWRYLLKR 580
>TAIR|locus:2009420 [details] [associations]
symbol:VIM1 "AT1G57820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IPI] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0010369 "chromocenter" evidence=IDA]
[GO:0010385 "double-stranded methylated DNA binding" evidence=IDA]
[GO:0031508 "centromeric heterochromatin assembly" evidence=IMP]
[GO:0032776 "DNA methylation on cytosine" evidence=IMP] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0051301 "cell division"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0000911 "cytokinesis by
cell plate formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009555 "pollen development"
evidence=RCA] [GO:0016444 "somatic cell DNA recombination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 InterPro:IPR017907
GO:GO:0010369 HSSP:Q99728 GO:GO:0031508 GO:GO:0010424 GO:GO:0008327
EMBL:AC079732 GO:GO:0010385 eggNOG:COG3440 HOGENOM:HOG000240700
KO:K10638 ProtClustDB:CLSN2679702 GO:GO:0010428 GO:GO:0010429
GO:GO:0090309 Gene3D:2.30.280.10 EMBL:AY065438 EMBL:AY117235
IPI:IPI00542643 IPI:IPI00544062 PIR:E96612 RefSeq:NP_176092.2
RefSeq:NP_974045.1 UniGene:At.28484 ProteinModelPortal:Q8VYZ0
SMR:Q8VYZ0 STRING:Q8VYZ0 EnsemblPlants:AT1G57820.1 GeneID:842157
KEGG:ath:AT1G57820 TAIR:At1g57820 InParanoid:Q8VYZ0 OMA:RSAYAPE
PhylomeDB:Q8VYZ0 Genevestigator:Q8VYZ0 Uniprot:Q8VYZ0
Length = 645
Score = 214 (80.4 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 65/183 (35%), Positives = 92/183 (50%)
Query: 210 GVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLD 269
G+ VG + R E G H + GI G S G A ++ LSG Y+DD D
Sbjct: 277 GLLVGESWEDRLECRQWGAHFPHVAGI--AGQSTYG---------AQSVALSGGYKDDED 325
Query: 270 NAEDVVYTGQGGHNLTGDKR----QIRDQKLERGNLALKNCVDQDLPVRVIRGH-DCSSS 324
+ E +YTG GG +L+G+KR Q DQK E+ N ALK PVRV+R H + S+
Sbjct: 326 HGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFEKSNAALKLSCKLGYPVRVVRSHKEKRSA 385
Query: 325 YTGKV-YTYDGLYKVVKYWAEKGLSG-FTVFKYRLRRLEGQPILTTNQVRFINGRVPQSL 382
Y + YDG+Y++ K W + G+ G F V +Y R + +P T+ NG P+ +
Sbjct: 386 YAPEEGVRYDGVYRIEKCWRKVGVQGSFKVCRYLFVRCDNEPAPWTSDE---NGDRPRPI 442
Query: 383 SEI 385
I
Sbjct: 443 PNI 445
>TAIR|locus:2064676 [details] [associations]
symbol:SDG11 "SET domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR007728 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0018024 PROSITE:PS50868
EMBL:AC005970 Gene3D:2.30.280.10 IPI:IPI00543916 PIR:G84472
RefSeq:NP_178647.1 UniGene:At.41135 ProteinModelPortal:Q3EC60
SMR:Q3EC60 PaxDb:Q3EC60 PRIDE:Q3EC60 EnsemblPlants:AT2G05900.1
GeneID:815142 KEGG:ath:AT2G05900 TAIR:At2g05900 eggNOG:KOG1082
HOGENOM:HOG000154456 InParanoid:Q3EC60 OMA:HIPPLTE PhylomeDB:Q3EC60
ProtClustDB:CLSN2912986 Genevestigator:Q3EC60 GermOnline:AT2G05900
Uniprot:Q3EC60
Length = 312
Score = 190 (71.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 45/137 (32%), Positives = 76/137 (55%)
Query: 223 MVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGH 282
M VG HS ++ ++++G+ GD + +AV+++ SG D ++ + +++TG GG
Sbjct: 1 MGLVGLHSGTID-MEFIGVEDHGDEEGK--QIAVSVISSGKNADKTEDPDSLIFTGFGGT 57
Query: 283 NLTGDKRQIRDQKLERGNLALKNCVDQDLPVRVIRGHDCSSSYTGKVYTYDGLYKVVKYW 342
++ Q +QKLER N+ L+ + VRV+R G +Y YDG Y + W
Sbjct: 58 DMYHG--QPCNQKLERLNIPLEAAFRKKSIVRVVRCMKDEKRTNGNIYIYDGTYMITNRW 115
Query: 343 AEKGLSGFTVFKYRLRR 359
E+G +GF VFK++L R
Sbjct: 116 EEEGQNGFIVFKFKLVR 132
>TAIR|locus:2164835 [details] [associations]
symbol:VIM3 "VARIANT IN METHYLATION 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0010228
GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907 HSSP:P38398
EMBL:AB012243 GO:GO:0010424 GO:GO:0008327 EMBL:BT010573
EMBL:AK176778 EMBL:AK221256 IPI:IPI00535078 RefSeq:NP_198771.1
UniGene:At.30336 ProteinModelPortal:Q9FKA7 SMR:Q9FKA7 STRING:Q9FKA7
PRIDE:Q9FKA7 EnsemblPlants:AT5G39550.1 GeneID:833951
KEGG:ath:AT5G39550 TAIR:At5g39550 eggNOG:COG3440
HOGENOM:HOG000240700 InParanoid:Q9FKA7 KO:K10638 OMA:TKCSVEA
PhylomeDB:Q9FKA7 ProtClustDB:CLSN2679702 Genevestigator:Q9FKA7
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
Uniprot:Q9FKA7
Length = 617
Score = 190 (71.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 62/193 (32%), Positives = 92/193 (47%)
Query: 210 GVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLD 269
GV VG + R E G H + GI G S G A ++ LSG Y+DD D
Sbjct: 262 GVLVGESWEDRQECRQWGAHFPHIAGI--AGQSAVG---------AQSVALSGGYDDDED 310
Query: 270 NAEDVVYTGQGGHNLTGDKR----QIRDQKLERGNLALKNCVDQDLPVRVIRG-HDCSSS 324
+ E +YTG GG +L+G+KR Q DQ + N +L+ PVRV+R + S+
Sbjct: 311 HGEWFLYTGSGGRDLSGNKRINKKQSSDQAFKNMNESLRLSCKMGYPVRVVRSWKEKRSA 370
Query: 325 YT-GKVYTYDGLYKVVKYWAEKGLSG-FTVFKYRLRRLEGQPILTTNQVRFINGRVPQSL 382
Y + YDG+Y++ K W+ G+ G F V +Y R + +P T+ +G P+ L
Sbjct: 371 YAPAEGVRYDGVYRIEKCWSNVGVQGSFKVCRYLFVRCDNEPAPWTSDE---HGDRPRPL 427
Query: 383 SEIRGYQKNCCLF 395
+ + LF
Sbjct: 428 PNVPELETAADLF 440
>TAIR|locus:2013800 [details] [associations]
symbol:VIM4 "VARIANT IN METHYLATION 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
PROSITE:PS51292 SMART:SM00184 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
HSSP:P38398 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00535924
PIR:H96684 RefSeq:NP_176778.1 UniGene:At.35808 UniGene:At.48345
ProteinModelPortal:Q9C8E1 SMR:Q9C8E1 STRING:Q9C8E1
EnsemblPlants:AT1G66040.1 GeneID:842917 KEGG:ath:AT1G66040
TAIR:At1g66040 InParanoid:Q9C8E1 OMA:RMESPSW PhylomeDB:Q9C8E1
Genevestigator:Q9C8E1 Uniprot:Q9C8E1
Length = 622
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 60/193 (31%), Positives = 92/193 (47%)
Query: 210 GVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLD 269
GV VG + R E G H + GI G + G A ++ LSG Y+DD D
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGI--AGQAAVG---------AQSVALSGGYDDDED 310
Query: 270 NAEDVVYTGQGGHNLTGDKR----QIRDQKLERGNLALKNCVDQDLPVRVIRG-HDCSSS 324
+ E +YTG GG +L+G+KR Q DQ + N AL+ PVRV+R + S+
Sbjct: 311 HGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSA 370
Query: 325 YT-GKVYTYDGLYKVVKYWAEKGLSGF-TVFKYRLRRLEGQPILTTNQVRFINGRVPQSL 382
Y + YDG+Y++ K W+ G+ G + +Y R + +P T+ +G P+ L
Sbjct: 371 YAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSDE---HGDRPRPL 427
Query: 383 SEIRGYQKNCCLF 395
++ + LF
Sbjct: 428 PDVPELENATDLF 440
>TAIR|locus:2013840 [details] [associations]
symbol:VIM2 "VARIANT IN METHYLATION 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0032776 "DNA methylation on
cytosine" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001965
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184 SMART:SM00249
SMART:SM00466 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393
InterPro:IPR017907 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
UniGene:At.35808 UniGene:At.48345 EMBL:BT010568 EMBL:AK175694
EMBL:AK175887 EMBL:AK176012 IPI:IPI00541483 PIR:A96685
RefSeq:NP_176779.2 ProteinModelPortal:Q680I0 SMR:Q680I0
STRING:Q680I0 EnsemblPlants:AT1G66050.1 GeneID:842919
KEGG:ath:AT1G66050 TAIR:At1g66050 InParanoid:Q680I0
PhylomeDB:Q680I0 Genevestigator:Q680I0 Uniprot:Q680I0
Length = 623
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 60/193 (31%), Positives = 92/193 (47%)
Query: 210 GVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLD 269
GV VG + R E G H + GI G + G A ++ LSG Y+DD D
Sbjct: 262 GVLVGESWEDRQECRQWGVHFPHVAGI--AGQAAVG---------AQSVALSGGYDDDED 310
Query: 270 NAEDVVYTGQGGHNLTGDKR----QIRDQKLERGNLALKNCVDQDLPVRVIRG-HDCSSS 324
+ E +YTG GG +L+G+KR Q DQ + N AL+ PVRV+R + S+
Sbjct: 311 HGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSA 370
Query: 325 YT-GKVYTYDGLYKVVKYWAEKGLSGF-TVFKYRLRRLEGQPILTTNQVRFINGRVPQSL 382
Y + YDG+Y++ K W+ G+ G + +Y R + +P T+ +G P+ L
Sbjct: 371 YAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSDE---HGDRPRPL 427
Query: 383 SEIRGYQKNCCLF 395
++ + LF
Sbjct: 428 PDVPELENATDLF 440
>TAIR|locus:2009425 [details] [associations]
symbol:VIM5 "VARIANT IN METHYLATION 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
GO:GO:0010424 GO:GO:0008327 EMBL:AC079732 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00546002
PIR:D96612 RefSeq:NP_176091.2 UniGene:At.36964
ProteinModelPortal:Q9FVS2 SMR:Q9FVS2 PRIDE:Q9FVS2
EnsemblPlants:AT1G57800.1 GeneID:842155 KEGG:ath:AT1G57800
TAIR:At1g57800 InParanoid:Q9FVS2 OMA:GTSHEEE PhylomeDB:Q9FVS2
Genevestigator:Q9FVS2 Uniprot:Q9FVS2
Length = 660
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 42/117 (35%), Positives = 61/117 (52%)
Query: 255 AVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKR----QIRDQKLERGNLALKNCVDQD 310
A ++VL+G Y+DD D+ E +YTG GG L G+KR Q DQ N AL+
Sbjct: 323 AQSVVLAGGYDDDEDHGEWFLYTGSGGRILKGNKRTNTVQAFDQVFLNFNEALRLSCKLG 382
Query: 311 LPVRVIRG-HDCSSSYT--GKVYTYDGLYKVVKYWAEKGLSGFTVFKYRLRRLEGQP 364
PVRV+R D S Y G + YDG+Y++ K W + G + ++ R + +P
Sbjct: 383 YPVRVVRSTKDKRSPYAPQGGLLRYDGVYRIEKCWR---IVGIQMCRFLFVRCDNEP 436
>TAIR|locus:2138591 [details] [associations]
symbol:ORTHL "ORTHRUS-like" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0042393
EMBL:AF076275 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 GO:GO:0010428 GO:GO:0010429
Gene3D:2.30.280.10 EMBL:AC002983 EMBL:AL161512 EMBL:AK175637
EMBL:BT022101 EMBL:AJ608275 IPI:IPI00536405 IPI:IPI00846324
PIR:T00949 PIR:T01825 RefSeq:NP_001078357.1 RefSeq:NP_192599.2
UniGene:At.33741 UniGene:At.48832 ProteinModelPortal:Q681I0
SMR:Q681I0 PaxDb:Q681I0 PRIDE:Q681I0 EnsemblPlants:AT4G08590.1
GeneID:826420 KEGG:ath:AT4G08590 TAIR:At4g08590 InParanoid:Q681I0
OMA:PPANHEQ PhylomeDB:Q681I0 ProtClustDB:CLSN2918572
Genevestigator:Q681I0 Uniprot:Q681I0
Length = 465
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/159 (32%), Positives = 77/159 (48%)
Query: 210 GVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYEDDLD 269
GV VG + +R E G H ++ I G DY A ++V+SG Y+DD D
Sbjct: 237 GVLVGESWENRVECRQWGVHLPHVSCI--AGQE---DYG------AQSVVISGGYKDDED 285
Query: 270 NAEDVVYTGQG-GHNLTGDKRQIRDQKLERGNLALKNCVDQDLPVRVIRGH-DCSSSYTG 327
+ E +YTG+ G + + DQ+ E N AL+ + PVRV+R + D S+Y
Sbjct: 286 HGEWFLYTGRSRGRHFANE-----DQEFEDLNEALRVSCEMGYPVRVVRSYKDRYSAYAP 340
Query: 328 KV-YTYDGLYKVVKYWAEKGL-SGFTVFKYRLRRLEGQP 364
K YDG+Y++ K W + F V +Y R + +P
Sbjct: 341 KEGVRYDGVYRIEKCWRKARFPDSFKVCRYLFVRCDNEP 379
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/161 (33%), Positives = 78/161 (48%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G IPG+ VG + R ++ G H + GI G S G Y ++VL+G +E
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIH--GRSNDGAY---------SLVLAGGFE 497
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NCVDQDLPVRVIRGHDC 321
D++D ++ YTG GG NL G+KR DQ L N AL NC D L ++ G +
Sbjct: 498 DEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNC-DAPLDDKI--GAES 554
Query: 322 SSSYTGK----VYTYDGLYKVVKYWAEKG--LSG-FTVFKY 355
+ GK + ++ G K+ KY E+G G + V KY
Sbjct: 555 RNWRAGKPVRVIRSFKGR-KISKYAPEEGNRYDGIYKVVKY 594
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/161 (33%), Positives = 78/161 (48%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G IPG+ VG + R ++ G H + GI G S G Y ++VL+G +E
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIH--GRSNDGAY---------SLVLAGGFE 497
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NCVDQDLPVRVIRGHDC 321
D++D ++ YTG GG NL G+KR DQ L N AL NC D L ++ G +
Sbjct: 498 DEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNC-DAPLDDKI--GAES 554
Query: 322 SSSYTGK----VYTYDGLYKVVKYWAEKG--LSG-FTVFKY 355
+ GK + ++ G K+ KY E+G G + V KY
Sbjct: 555 RNWRAGKPVRVIRSFKGR-KISKYAPEEGNRYDGIYKVVKY 594
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 61/200 (30%), Positives = 87/200 (43%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + A G IPGV VG + R ++ G H + G
Sbjct: 394 ATSSSRRDWGKGMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAG 453
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMY-----EDDLDNAEDVVYTGQGG-HNLTGDKR 289
I G S G Y + V +G Y D + + GQ LT + R
Sbjct: 454 IH--GRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNR 511
Query: 290 QIRDQKLERGNLALKNCVD--QDLPVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAE 344
+ N D Q PVRV+R G S + YDG+YKVVKYW E
Sbjct: 512 ALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPE 571
Query: 345 KGLSGFTVFKYRLRRLEGQP 364
+G SGF V++Y LRR + +P
Sbjct: 572 RGKSGFLVWRYLLRRDDTEP 591
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 61/200 (30%), Positives = 87/200 (43%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A + ++R K ++ + + E + A G IPGV VG + R ++ G H + G
Sbjct: 386 ATSSSRRDWGKGMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAG 445
Query: 236 IDYMGMSYKGDYKNYIFPLAVAIVLSGMY-----EDDLDNAEDVVYTGQGG-HNLTGDKR 289
I G S G Y + V +G + D + + GQ LT + R
Sbjct: 446 IH--GRSNDGAYSLVLAGGYEDDVDNGNFFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNR 503
Query: 290 QIRDQKLERGNLALKNCVD--QDLPVRVIR---GHDCSSSYTGKVYTYDGLYKVVKYWAE 344
+ N D Q PVRV+R G S + YDG+YKVVKYW E
Sbjct: 504 ALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPE 563
Query: 345 KGLSGFTVFKYRLRRLEGQP 364
KG SGF V++Y LRR + +P
Sbjct: 564 KGKSGFIVWRYLLRRDDTEP 583
>UNIPROTKB|F1MFX7 [details] [associations]
symbol:F1MFX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071158 "positive regulation of cell cycle arrest"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:DAAA02022659
EMBL:DAAA02022660 EMBL:DAAA02022661 IPI:IPI00687692
Ensembl:ENSBTAT00000027737 Uniprot:F1MFX7
Length = 752
Score = 146 (56.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 54/161 (33%), Positives = 77/161 (47%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G IPGV VG + R ++ G H + GI G S G Y ++VL+G +
Sbjct: 399 GPIPGVPVGSTWRFRVQVSEAGVHRPHVGGIH--GRSNDGAY---------SLVLAGGFA 447
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NCVDQDLPVRVIRGHDC 321
D++D ++ YTG GG NL G+KR DQ L N AL NC D L ++ G +
Sbjct: 448 DEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNC-DAPLDDKI--GAES 504
Query: 322 SSSYTGK----VYTYDGLYKVVKYWAEKG--LSG-FTVFKY 355
+ GK + ++ G K+ KY E+G G + V KY
Sbjct: 505 RNWRAGKPVRVIRSFKGR-KISKYAPEEGNRYDGIYKVVKY 544
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 145 (56.1 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 53/161 (32%), Positives = 77/161 (47%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G IPG+ VG + R ++ G H + GI G S G Y ++VL+G +
Sbjct: 448 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIH--GRSNDGAY---------SLVLAGGFA 496
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NCVDQDLPVRVIRGHDC 321
D++D ++ YTG GG NL G+KR DQ L N AL NC D L ++ G +
Sbjct: 497 DEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNC-DAPLDDKI--GAES 553
Query: 322 SSSYTGK----VYTYDGLYKVVKYWAEKG--LSG-FTVFKY 355
+ GK + ++ G K+ KY E+G G + V KY
Sbjct: 554 RNWRAGKPVRVIRSFKGR-KISKYAPEEGNRYDGIYKVVKY 593
>UNIPROTKB|E2RKA4 [details] [associations]
symbol:UHRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0051865
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 InterPro:IPR021991 Pfam:PF12148
CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AAEX03007831
RefSeq:XP_864420.2 ProteinModelPortal:E2RKA4
Ensembl:ENSCAFT00000002134 GeneID:474702 KEGG:cfa:474702
NextBio:20850676 Uniprot:E2RKA4
Length = 803
Score = 145 (56.1 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 53/161 (32%), Positives = 77/161 (47%)
Query: 206 GDIPGVHVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYKGDYKNYIFPLAVAIVLSGMYE 265
G IPG+ VG + R ++ G H + GI G S G Y ++VL+G +
Sbjct: 449 GPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIH--GRSNDGAY---------SLVLAGGFA 497
Query: 266 DDLDNAEDVVYTGQGGHNLTGDKR---QIRDQKLERGNLALK-NCVDQDLPVRVIRGHDC 321
D++D ++ YTG GG NL G+KR DQ L N AL NC D L ++ G +
Sbjct: 498 DEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNC-DAPLDDKI--GAES 554
Query: 322 SSSYTGK----VYTYDGLYKVVKYWAEKG--LSG-FTVFKY 355
+ GK + ++ G K+ KY E+G G + V KY
Sbjct: 555 RNWRAGKPVRVIRSFKGR-KISKYAPEEGNRYDGIYKVVKY 594
>UNIPROTKB|F1NS44 [details] [associations]
symbol:F1NS44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:AADN02037704
EMBL:AADN02066291 EMBL:AADN02066292 EMBL:AADN02066293
EMBL:AADN02066294 EMBL:AADN02066295 EMBL:AADN02066296
EMBL:AADN02066297 EMBL:AADN02066298 EMBL:AADN02066299
IPI:IPI00589861 Ensembl:ENSGALT00000024273 Uniprot:F1NS44
Length = 755
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/209 (28%), Positives = 92/209 (44%)
Query: 177 AKNKAKRPDLKAVSKMMKNNEI-LYSAKRIGDIPGVHVGHQFYSRAEMVAVGFHSHWLNG 235
A +++R K ++ + + E + + G IPGV VG + R ++ G H + G
Sbjct: 375 ASTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGVPVGTTWKFRVQVSEAGVHRPHVGG 434
Query: 236 IDYMGM--SYK----GDYKNYIFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHN--LTGD 287
I +Y GD+++ I +G DL + + G+ + LT
Sbjct: 435 IHGRSNDGAYSLVLPGDFESCIRDRGDEFTYTGSGGRDLSGNKRI---GEHSFDQTLTHM 491
Query: 288 KRQIR---DQKLERGNLALKNCVDQDLPVRVIR---GHDCSSSYTGKVYTYDGLYKVVKY 341
R + D L+ N A PVRV+R G S + YDG+YKVVKY
Sbjct: 492 NRALALNCDAPLDDKNGAESKNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKY 551
Query: 342 WAEKGLSGFTVFKYRLRRLEGQPILTTNQ 370
W E G GF V++Y LRR + +P T++
Sbjct: 552 WPEIGKCGFLVWRYLLRRDDVEPAPWTSE 580
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 404 325 0.00087 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 598 (64 KB)
Total size of DFA: 215 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.32u 0.12s 23.44t Elapsed: 00:00:01
Total cpu time: 23.33u 0.12s 23.45t Elapsed: 00:00:01
Start: Fri May 10 23:11:18 2013 End: Fri May 10 23:11:19 2013