BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036086
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 53/292 (18%)
Query: 28 EMKRLRLNLRDLHNLLRKAKQDAILN-PL---LTDLNDLASDVDGLID------ARMEVS 77
E +RL + +L A++ + N PL L LN +VD ++D R S
Sbjct: 30 EFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAATYEVDDILDEYKTKATRFSQS 89
Query: 78 KY-KFEKKVMKIHQG---RLVPLLNSLQKIVAGHD--------VEGGALSQRSGETGLES 125
+Y ++ KV+ R+ ++ L+ I VE A+ + +G E
Sbjct: 90 EYGRYHPKVIPFRHKVGKRMDQVMKKLKAIAEERKNFHLHEKIVERQAVRRETGSVLTEP 149
Query: 126 SV---DSVKNALLR-------DGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKV 175
V D K+ +++ D + + I+G+ G +T +A VF D V K+
Sbjct: 150 QVYGRDKEKDEIVKILINNVSDAQHLSVLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKI 209
Query: 176 WYSVGKNLDFSTAVQEI------------------RNRRNEIPSSKRLLFALDDVSHLND 217
W V ++ D ++ I + + E+ + KR L LDDV + +
Sbjct: 210 WICVSEDFDEKRLIKAIVESIEGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQ 269
Query: 218 DNLANLRLLVSDMRLVGFYVLVTTHSTSVATMMMQTVPEAEHLIYFSESNSW 269
ANLR V + G VL TT V ++M P L S+ + W
Sbjct: 270 QKWANLR-AVLKVGASGASVLTTTRLEKVGSIMGTLQP--YELSNLSQEDCW 318
>sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana
GN=RPP13L4 PE=2 SV=2
Length = 852
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 122 GLESSVDSVKNALLRDGNTVRFIH-IVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE +K L R ++ I VG+ G +T IA VF D +++ R ++W SV
Sbjct: 162 GLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVS 221
Query: 181 KNLDFSTAVQEI-RN---------------RRNEIPSSKRLLFALDDVSHLNDDNLANLR 224
+ ++ I RN + + KR L +DDV D NL+
Sbjct: 222 QTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVW---DKNLSWWD 278
Query: 225 LLVSDM-RLVGFYVLVTTHSTSVATMMMQTVPEAEHLIYFSESNSW 269
+ + R G V+VTT S SVA + + S NSW
Sbjct: 279 KIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSW 324
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 50/277 (18%)
Query: 28 EMKRLRLNLRDLHNLLRKAKQ----DAILNPLLTDLNDLASDVDGLID------ARMEVS 77
E +RL + +L A++ D L L LN +VD ++D R S
Sbjct: 30 EFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAATYEVDDILDEYKTKATRFLQS 89
Query: 78 KY-KFEKKVMKIHQG---RLVPLLNSLQKIVAGHD--------VEGGALSQRSGETGLES 125
+Y ++ KV+ R+ ++ L I +E A ++ +G E
Sbjct: 90 EYGRYHPKVIPFRHKVGKRMDQVMKKLNAIAEERKKFHLQEKIIERQAATRETGSVLTEP 149
Query: 126 SV---DSVKNALLR-------DGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKV 175
V D K+ +++ D + + I+G+ G +T ++ VF D V R K+
Sbjct: 150 QVYGRDKEKDEIVKILINTASDAQKLSVLPILGMGGLGKTTLSQMVFNDQRVTERFYPKI 209
Query: 176 WYSVGKNLDFSTAVQEI-----------------RNRRNEIPSSKRLLFALDDVSHLNDD 218
W + + + ++ I + + E+ + KR LDDV + +
Sbjct: 210 WICISDDFNEKRLIKAIVESIEGKSLSDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQH 269
Query: 219 NLANLRLLVSDMRLVGFYVLVTTHSTSVATMMMQTVP 255
ANLR ++ + G +VL TT V ++M P
Sbjct: 270 KWANLRAVLK-VGASGAFVLTTTRLEKVGSIMGTLQP 305
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 122 GLESSVDSVKNALLRD---GNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYS 178
G E D + L+ + V + I+G+ G +T +A VF D + K+W
Sbjct: 153 GREKEEDEIVKILINNVSYSEEVPVLPILGMGGLGKTTLAQMVFNDQRITEHFNLKIWVC 212
Query: 179 VGKNLDFSTAVQEI-----------------RNRRNEIPSSKRLLFALDDVSHLNDDNLA 221
V + D ++ I + + E+ + KR LDDV + + +
Sbjct: 213 VSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQEKWD 272
Query: 222 NLRLLVSDMRLVGFYVLVTTHSTSVATMM 250
NLR V + G +L+TT + ++M
Sbjct: 273 NLR-AVLKIGASGASILITTRLEKIGSIM 300
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 146 IVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNLDFSTAVQEI------------- 192
I+G+ G +T +A +F D+ V K+W V + D ++ I
Sbjct: 182 IIGMGGLGKTTLAQMIFNDERVTKHFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPHVED 241
Query: 193 ----RNRRNEIPSSKRLLFALDDVSHLNDDNLANLRLLVSDMRLVGFYVLVTTHSTSVAT 248
+ + E+ + KR L LDDV + + + A LR +++ + G +L TT V +
Sbjct: 242 LASFQKKLQELLNGKRYLLVLDDVWNDDLEKWAKLRAVLT-VGARGASILATTRLEKVGS 300
Query: 249 MMMQTVP 255
+M P
Sbjct: 301 IMGTLQP 307
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 26/153 (16%)
Query: 139 NTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNLDFSTAVQEIRNRRNE 198
N + + IVG+ G +T ++ ++ D V+S KVW V + D +++
Sbjct: 194 NGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTS 253
Query: 199 IPS------------SKRL-------LFALDDVSHLNDDNLANLRLLVSDM--RLVGFYV 237
P +RL L LDD L ++N A+ LL G +
Sbjct: 254 RPCEFTDLDVLQVKLKERLTGTGLPFLLVLDD---LWNENFADWDLLRQPFIHAAQGSQI 310
Query: 238 LVTTHSTSVATMMMQTVPEAEHLIYFSESNSWS 270
LVTT S VA++M +L S+ + WS
Sbjct: 311 LVTTRSQRVASIMCAV--HVHNLQPLSDGDCWS 341
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 144 IHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNLDFSTAVQEIRN-------RR 196
I +VG+ G +T + VF D V K+W S G N + T + +
Sbjct: 196 ISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWISAGINFNVFTVTKAVLQDITSSAVNT 255
Query: 197 NEIP----------SSKRLLFALDDVSHLNDDNLANLRLLVSDMRLVGFYVLVTTHSTSV 246
++P S KR L LDD +D + ++ +D G +++TT S V
Sbjct: 256 EDLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTDAE-EGSKIVLTTRSEIV 314
Query: 247 ATM 249
+T+
Sbjct: 315 STV 317
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE++V + L+ + N V+ + I G+ G +T +A +VF +DVK + W V
Sbjct: 164 VGLEANVKKLVGYLVDEAN-VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVS 222
Query: 181 KNLDFSTAVQEI 192
++ Q+I
Sbjct: 223 QDFTRMNVWQKI 234
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE++V + L+ + N V+ + I G+ G +T +A +VF +DVK + W V
Sbjct: 164 VGLEANVKKLVGYLVDEAN-VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVS 222
Query: 181 KNLDFSTAVQEI 192
++ Q+I
Sbjct: 223 QDFTRMNVWQKI 234
>sp|P0DI16|DRL44_ARATH Probable disease resistance protein RDL5 OS=Arabidopsis thaliana
GN=RDL5 PE=1 SV=1
Length = 1017
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE++V + L+ + N V+ + I G+ G +T +A +VF +DVK + W V
Sbjct: 164 VGLEANVKKLVGYLVDEAN-VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVS 222
Query: 181 KNLDFSTAVQEI 192
++ Q+I
Sbjct: 223 QDFTRMNVWQKI 234
>sp|F4IBE4|DRL10_ARATH Probable disease resistance protein RF45 OS=Arabidopsis thaliana
GN=RF45 PE=1 SV=1
Length = 1017
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE++V + L+ + N V+ + I G+ G +T +A +VF +DVK + W V
Sbjct: 164 VGLEANVKKLVGYLVDEAN-VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVS 222
Query: 181 KNLDFSTAVQEI 192
++ Q+I
Sbjct: 223 QDFTRMNVWQKI 234
>sp|Q9FJB5|RP8L3_ARATH Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana
GN=RPP8L3 PE=2 SV=1
Length = 901
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 52 LNPLLTDLNDLASDVDGLIDARMEVSKYKFEKKVMKIHQ-----GRLVPLLNSLQKIVAG 106
L LTD + +ASD++G+ +SK E + + I Q GR + L + ++I
Sbjct: 98 LACFLTDRHKVASDIEGITK---RISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREI--- 151
Query: 107 HDVEGGALSQRSGETGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDD 166
+ S S G+E SV+ + ++ N ++ + I G+ G +T +A ++F D
Sbjct: 152 --RQTFPNSSESDLVGVEQSVEELVGPMVEIDN-IQVVSISGMGGIGKTTLARQIFHHDL 208
Query: 167 VKSRLPFKVWYSVGKNLD----FSTAVQEIRNRRNEI 199
V+ W V + + +QE+R EI
Sbjct: 209 VRRHFDGFAWVCVSQQFTQKHVWQRILQELRPHDGEI 245
>sp|Q9STE5|R13L2_ARATH Putative disease resistance RPP13-like protein 2 OS=Arabidopsis
thaliana GN=RPP13L2 PE=3 SV=1
Length = 847
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 21/97 (21%)
Query: 137 DG-NTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNLDF---------- 185
DG N + I I G+ G +T++A ++F DVK ++VW +V +
Sbjct: 179 DGDNKIYMISIFGMEGLGKTSLARKLFNSSDVKESFEYRVWTNVSGECNTRDILMRIISS 238
Query: 186 ----------STAVQEIRNRRNEIPSSKRLLFALDDV 212
A QE+ ++I KR L +DD+
Sbjct: 239 LEETSEGELEKMAQQELEVYLHDILQEKRYLVVVDDI 275
>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13
PE=2 SV=2
Length = 835
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFI-HIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSV 179
GLE + LL RFI I G+ G +TA+A +++ DVK R ++ W V
Sbjct: 164 VGLEDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYV 223
Query: 180 GK 181
+
Sbjct: 224 SQ 225
>sp|Q8W474|DRL7_ARATH Probable disease resistance protein At1g58390 OS=Arabidopsis
thaliana GN=At1g58390 PE=2 SV=4
Length = 907
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE +V + L+ D V+ + I G+ G +T +A +VF +DVK + W V
Sbjct: 164 VGLEVNVKKLVGYLV-DEENVQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVS 222
Query: 181 KNLDFSTAVQEI------RNRRNEI 199
+ Q I R +++EI
Sbjct: 223 QEFTRKNVWQMILQNLTSREKKDEI 247
>sp|Q9C646|RX24L_ARATH Probable disease resistance protein RXW24L OS=Arabidopsis thaliana
GN=RXW24L PE=2 SV=1
Length = 899
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
G+E++V + L+ + + + + + G+ G +T +A +VF D VK R W SV
Sbjct: 163 VGMEANVKKLVGYLV-EKDDYQIVSLTGMGGLGKTTLARQVFNHDVVKDRFDGFAWVSVS 221
Query: 181 KNLDFSTAVQEI------RNRRNEIPS---------------SKRLLFALDDVSHLNDDN 219
+ + Q I + R++EI + S + L LDD+ D +
Sbjct: 222 QEFTRISVWQTILQNLTSKERKDEIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWD 281
Query: 220 LANLRLLVSDMRLVGFYVLVTTHSTSVA 247
L ++ + + G+ VL+T+ + S+A
Sbjct: 282 L--IKPIFPPKK--GWKVLLTSRTESIA 305
>sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180 OS=Arabidopsis
thaliana GN=At1g50180 PE=3 SV=2
Length = 857
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE S++ + N L+ G +R I G+ G +T +A ++F V+ W V
Sbjct: 165 VGLEQSLEKLVNDLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVS 224
Query: 181 KNLDFSTAVQEI 192
++ Q+I
Sbjct: 225 QDCRRRHVWQDI 236
>sp|Q9LQ54|DRL12_ARATH Probable disease resistance protein At1g59620 OS=Arabidopsis
thaliana GN=At1g59620 PE=2 SV=3
Length = 870
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE +V + L+ ++ + + I G+ G +T +A +VF + VKS W V
Sbjct: 140 VGLEENVKKLVGHLVEVEDSSQVVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWVCVS 199
Query: 181 KNLDFSTAVQEI 192
+ Q I
Sbjct: 200 QQFTRKYVWQTI 211
>sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g58602 OS=Arabidopsis
thaliana GN=At1g58602 PE=2 SV=1
Length = 1138
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 118 SGETGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWY 177
SG LE +V + + + N + + I G+ G +T +A +VF D V + W
Sbjct: 160 SGFVALEENVKKLVGYFVEEDN-YQVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWV 218
Query: 178 SVGKNLDFSTAVQEI 192
SV ++ Q I
Sbjct: 219 SVSQDFTLKNVWQNI 233
>sp|Q9FHJ2|DRL34_ARATH Probable disease resistance protein At5g45440 OS=Arabidopsis
thaliana GN=At5g45440 PE=2 SV=1
Length = 346
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 104 VAGHDVEGGALSQRSGETGLESSVDSVKNALLRDGNTVRF--IHIVGVSGTDETAIAHRV 161
+ GHD+ G E+ + S+++ LL + F + +VG G +TA+ ++
Sbjct: 50 LPGHDI-----------YGFENEIKSLQHFLLDQKSYKLFKSLVVVGEYGVGKTALCQQI 98
Query: 162 FTDDDVKSRLPFKVWYSVGKN 182
F D DV++ ++W S+ N
Sbjct: 99 FNDYDVRNAYAPRIWVSMHSN 119
>sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1
PE=1 SV=1
Length = 926
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 27/171 (15%)
Query: 144 IHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNL----DFSTAVQEIRNRRN-E 198
+ +VG+ G+ +T ++ +F V+ W ++ K+ F T ++E + +
Sbjct: 196 VAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIEDVFRTMIKEFYKEADTQ 255
Query: 199 IPS-------------------SKRLLFALDDVSHLNDDNLANLRLLVSDMRLVGFYVLV 239
IP+ SKR + LDDV + + + D + G V++
Sbjct: 256 IPAELYSLGYRELVEKLVEYLQSKRYIVVLDDV--WTTGLWREISIALPD-GIYGSRVMM 312
Query: 240 TTHSTSVATMMMQTVPEAEHLIYFSESNSWSNLNCELPPSSQEAHRVEDLE 290
TT +VA+ + E +W + + P+S E R ++LE
Sbjct: 313 TTRDMNVASFPYGIGSTKHEIELLKEDEAWVLFSNKAFPASLEQCRTQNLE 363
>sp|Q9TT94|ACOD_BOVIN Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2
Length = 359
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 141 VRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKNLDFSTAVQE 191
V F +++G G TA AHR+++ K+RLP +V+ +G + F V E
Sbjct: 104 VLFYYLMGALGI--TAGAHRLWSHRTYKARLPLRVFLIIGNTMAFQNDVFE 152
>sp|Q9STE7|R13L3_ARATH Putative disease resistance RPP13-like protein 3 OS=Arabidopsis
thaliana GN=RPP13L3 PE=3 SV=1
Length = 847
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 121 TGLESSVDSVKNALLRDGNTVR--FIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYS 178
GLE V + LL D + I I G+ G +TA+A +++ DVK R + W
Sbjct: 163 VGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTY 222
Query: 179 VGK 181
V +
Sbjct: 223 VSQ 225
>sp|Q9FHI7|DRL35_ARATH Probable disease resistance protein At5g45490 OS=Arabidopsis
thaliana GN=At5g45490 PE=2 SV=1
Length = 354
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 104 VAGHDVEGGALSQRSGETGLESSVDSVKNALLRDGNTVRF--IHIVGVSGTDETAIAHRV 161
+ GHD+ G ++ + S+++ LL F + IVG G +TA+ ++
Sbjct: 56 LPGHDIHG-----------FDNEIKSLQHFLLDQKVRREFKSLVIVGEYGVGKTALCQKI 104
Query: 162 FTDDDVKSRLPFKVWYSV 179
F D+ VKS +VW S+
Sbjct: 105 FNDEAVKSVYAPRVWVSM 122
>sp|Q84WD3|DRL26_ARATH Probable disease resistance protein At4g19060 OS=Arabidopsis
thaliana GN=At4g19060 PE=2 SV=2
Length = 383
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 130 VKNALLRDGNTVRF--IHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSV 179
+KN LL+ + F + IVG G +T + VF D+DVK ++W S+
Sbjct: 101 LKNFLLKQKESEEFKTLAIVGKYGVGKTTLCQAVFNDEDVKQVYFPRIWVSM 152
>sp|Q8W3K3|DRL8_ARATH Putative disease resistance protein At1g58400 OS=Arabidopsis
thaliana GN=At1g58400 PE=3 SV=1
Length = 910
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 121 TGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVG 180
GLE +V + L+ + + ++ + + G+ G +T +A +VF +DVK + W V
Sbjct: 165 VGLEVNVKKLVGYLVEEDD-IQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVS 223
Query: 181 KNLDFSTAVQEI 192
+ Q I
Sbjct: 224 QEFTRKNVWQMI 235
>sp|Q9FJK8|RP8L4_ARATH Probable disease resistance RPP8-like protein 4 OS=Arabidopsis
thaliana GN=RPP8L4 PE=2 SV=1
Length = 908
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 52 LNPLLTDLNDLASDVDGLIDARMEVSKYKFEKKVMKIHQGRLVPLLNSLQKIVAGHDVEG 111
L LTD + +ASD++G+ +V + +I G L Q+ V +
Sbjct: 98 LARFLTDRHKVASDIEGITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQR-VQREIRQT 156
Query: 112 GALSQRSGETGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRL 171
S S G+E SV+ + L+ + + + + I G+ G +T +A +VF D V+
Sbjct: 157 YPDSSESDLVGVEQSVEELVGHLV-ENDIYQVVSIAGMGGIGKTTLARQVFHHDLVRRHF 215
Query: 172 PFKVWYSVGKNLDFSTAVQEI 192
W V + Q I
Sbjct: 216 DGFAWVCVSQQFTLKHVWQRI 236
>sp|P31416|FABP1_MANSE Fatty acid-binding protein 1 OS=Manduca sexta GN=MFB1 PE=2 SV=1
Length = 132
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 134 LLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRLPFKVWYSVGKN 182
L+++G+ ++I V GT ET V TDD V+ LP K Y+V N
Sbjct: 42 LVKEGDKYKYIS-VSSDGTKETVFESGVETDDVVQGGLPIKTTYTVDGN 89
>sp|A8G243|SPEA_PROM2 Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus
(strain MIT 9215) GN=speA PE=3 SV=1
Length = 648
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 38 DLHNLLRKAKQDAILNPLLTDLNDLASD-VDGLIDARMEVSK-YKFEKKVMKIHQGRLVP 95
DL L+R+ K I PL+ ND+ D ++ L DA ++ K YK++ I+QG + P
Sbjct: 53 DLFKLVRELKSREINTPLIIRFNDILKDRINALHDAFLKAIKTYKYK----NIYQG-VFP 107
Query: 96 LLNSLQKIVAGHDVEGGALSQRSGETGLESSVDSVKNALLRDGNTV 141
+ + QK V +E G+ E G +S + + ALL + N++
Sbjct: 108 VKCNQQKNVLEKIIEFGSPWNFGLEVGSKSEL-LIGLALLENQNSL 152
>sp|Q1QE21|PDXB_PSYCK Erythronate-4-phosphate dehydrogenase OS=Psychrobacter
cryohalolentis (strain K5) GN=pdxB PE=3 SV=1
Length = 386
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 104 VAGHDVEGGALSQRSGETGLESSVDSVKNALLRDGNTVRFI--HIVGVSGTDETAIAHRV 161
VAG D+ ++ + L SV S+ +LL D N+V+F+ +G D+ +A R
Sbjct: 37 VAGRDINAQLMADVQPDVLLIRSVTSINESLLSDNNSVKFVGSATIGTDHVDQEYLAERN 96
Query: 162 FT 163
T
Sbjct: 97 IT 98
>sp|Q8W4J9|RPP8_ARATH Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8
PE=1 SV=2
Length = 908
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 52 LNPLLTDLNDLASDVDGLIDARMEVSKYKFEKKVMKIHQGRLVPLLNSLQKIVAGHDVEG 111
L LTD + +ASD++G+ EV + +I G L Q+ V +
Sbjct: 98 LACFLTDRHKVASDIEGITKRISEVIGEMQSFGIQQIIDGGRSLSLQERQR-VQREIRQT 156
Query: 112 GALSQRSGETGLESSVDSVKNALLRDGNTVRFIHIVGVSGTDETAIAHRVFTDDDVKSRL 171
S S G+E SV + L+ + + + + I G+ G +T +A +VF D V+
Sbjct: 157 YPDSSESDLVGVEQSVKELVGHLV-ENDVHQVVSIAGMGGIGKTTLARQVFHHDLVRRHF 215
Query: 172 PFKVWYSVGKNLDFSTAVQEI 192
W V + Q I
Sbjct: 216 DGFAWVCVSQQFTQKHVWQRI 236
>sp|P40064|NU157_YEAST Nucleoporin NUP157 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NUP157 PE=1 SV=1
Length = 1391
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 54 PLLTDLNDLASDVDGL-IDARM-EVSKYKFEKKVMKIHQGRLVPLLNSLQKIVAGHDVEG 111
PL ND A +D I R+ +VS++K EK + QG LL+S++
Sbjct: 1201 PLSDLFNDCADPLDYYEIKLRIFKVSQFKDEKVI----QGEWNRLLDSMK---------- 1246
Query: 112 GALSQRSGETGLESSVDSVKNALLRDGNTVR 142
A S G G ES + S+ N L+R G T R
Sbjct: 1247 NAPSPDVGSVGQESFLSSISNTLIRIGKTTR 1277
>sp|F1LP90|MINK1_RAT Misshapen-like kinase 1 OS=Rattus norvegicus GN=Mink1 PE=1 SV=2
Length = 1336
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 240 TTHSTSVATMMMQTVPEAEHLIYFSESNSWSNLNCELPPSSQEAHRVE-----------D 288
T S TM++Q PE E + ++SN ++NL + PS + D
Sbjct: 881 TQPSYGGGTMVVQRTPEEERSLLLADSNGYTNLPDVVQPSHSPTENSQGQSPPTKDGGGD 940
Query: 289 LETGSAMDEEGVTSLTQFLLDIDPVATGESLETVPTS 325
++ + G +S T F +D+ G S +T+P +
Sbjct: 941 YQSRGLVKAPGKSSFTMF-VDLGIYQPGGSGDTIPIT 976
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,330,485
Number of Sequences: 539616
Number of extensions: 5284735
Number of successful extensions: 14325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 14296
Number of HSP's gapped (non-prelim): 58
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)