Query 036098
Match_columns 182
No_of_seqs 138 out of 1156
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 09:26:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036098.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036098hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 3.1E-34 6.8E-39 256.0 15.5 134 3-140 53-191 (447)
2 PLN02663 hydroxycinnamoyl-CoA: 100.0 5.5E-32 1.2E-36 240.3 15.2 132 4-139 53-189 (431)
3 PF02458 Transferase: Transfer 100.0 9.1E-33 2E-37 243.3 10.1 135 3-141 54-194 (432)
4 PLN02481 Omega-hydroxypalmitat 100.0 3.8E-32 8.2E-37 242.1 13.8 139 2-143 62-208 (436)
5 PLN00140 alcohol acetyltransfe 100.0 1.1E-30 2.3E-35 233.4 13.1 127 2-136 56-190 (444)
6 PF00668 Condensation: Condens 97.4 0.00078 1.7E-08 55.1 8.1 116 4-126 41-160 (301)
7 PRK09294 acyltransferase PapA5 97.4 0.0019 4.1E-08 57.1 10.9 101 4-124 36-140 (416)
8 COG4908 Uncharacterized protei 96.8 0.0079 1.7E-07 53.7 9.0 115 4-125 39-156 (439)
9 PF03007 WES_acyltransf: Wax e 96.5 0.015 3.2E-07 48.9 8.1 115 3-124 37-158 (263)
10 TIGR02946 acyl_WS_DGAT acyltra 95.8 0.016 3.5E-07 51.5 5.2 112 4-123 32-151 (446)
11 PRK10252 entF enterobactin syn 94.8 0.29 6.3E-06 48.9 11.1 111 4-124 44-162 (1296)
12 PRK12467 peptide synthase; Pro 93.9 0.32 6.9E-06 54.6 9.9 113 4-126 2682-2802(3956)
13 PF07247 AATase: Alcohol acety 93.3 0.53 1.2E-05 42.3 8.8 43 80-124 124-170 (480)
14 PRK12316 peptide synthase; Pro 92.4 1.1 2.3E-05 51.6 11.2 113 4-126 4138-4258(5163)
15 PRK05691 peptide synthase; Val 92.2 0.65 1.4E-05 52.5 9.1 111 4-124 3294-3413(4334)
16 PRK12316 peptide synthase; Pro 92.0 0.85 1.8E-05 52.4 9.7 112 4-124 2639-2753(5163)
17 PRK12467 peptide synthase; Pro 91.9 0.77 1.7E-05 51.7 9.2 112 4-124 86-204 (3956)
18 PRK05691 peptide synthase; Val 90.7 1.2 2.5E-05 50.6 9.1 112 4-124 1765-1883(4334)
19 PRK13757 chloramphenicol acety 83.2 1.2 2.6E-05 36.8 3.0 28 95-122 185-212 (219)
20 PRK11856 branched-chain alpha- 77.1 2 4.4E-05 38.3 2.7 29 95-123 375-403 (411)
21 PF00302 CAT: Chloramphenicol 76.4 2.1 4.7E-05 34.9 2.4 38 79-118 164-205 (206)
22 PRK11855 dihydrolipoamide acet 71.7 3.3 7.1E-05 38.6 2.7 29 95-123 512-540 (547)
23 PRK11854 aceF pyruvate dehydro 61.6 6.4 0.00014 37.4 2.6 30 95-124 598-627 (633)
24 PF00198 2-oxoacid_dh: 2-oxoac 59.9 9.7 0.00021 31.4 3.1 30 95-124 196-225 (231)
25 PLN02528 2-oxoisovalerate dehy 55.3 10 0.00022 34.2 2.6 30 95-124 378-407 (416)
26 TIGR01349 PDHac_trf_mito pyruv 54.3 11 0.00023 34.3 2.6 30 95-124 400-429 (435)
27 PRK11857 dihydrolipoamide acet 53.2 11 0.00024 32.6 2.4 30 95-124 270-299 (306)
28 COG4845 Chloramphenicol O-acet 52.1 18 0.00039 29.8 3.3 29 95-123 184-212 (219)
29 PRK14843 dihydrolipoamide acet 48.7 14 0.0003 32.6 2.4 30 95-124 312-341 (347)
30 PRK05704 dihydrolipoamide succ 47.8 16 0.00035 32.9 2.7 29 96-124 371-399 (407)
31 TIGR01347 sucB 2-oxoglutarate 47.5 16 0.00034 32.8 2.6 30 95-124 366-395 (403)
32 PTZ00144 dihydrolipoamide succ 46.3 16 0.00035 33.0 2.5 30 95-124 381-410 (418)
33 TIGR02927 SucB_Actino 2-oxoglu 45.3 17 0.00037 34.3 2.5 29 96-124 553-581 (590)
34 TIGR01348 PDHac_trf_long pyruv 45.1 17 0.00037 33.9 2.5 29 95-123 511-539 (546)
35 PLN02226 2-oxoglutarate dehydr 43.4 18 0.0004 33.2 2.4 30 95-124 426-455 (463)
36 PLN02744 dihydrolipoyllysine-r 42.0 19 0.00042 33.7 2.3 29 95-123 504-532 (539)
37 KOG0558 Dihydrolipoamide trans 32.2 39 0.00085 30.2 2.5 29 95-123 436-464 (474)
38 PRK09709 exonuclease VIII; Rev 27.9 68 0.0015 31.8 3.6 25 148-172 234-261 (877)
39 COG4279 Uncharacterized conser 21.6 60 0.0013 27.6 1.7 28 140-167 100-135 (266)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=3.1e-34 Score=256.00 Aligned_cols=134 Identities=26% Similarity=0.423 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhcccCcC-----
Q 036098 3 AESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHLLSEET----- 77 (182)
Q Consensus 3 ~v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~----- 77 (182)
++++||+||++||++||||||||++.++ |+++|+| |++||.|++|+++.+++++.... +...+..|+|..+
T Consensus 53 ~~~~Lk~sLs~~L~~fyplAGRl~~~~~-g~~~i~c-~~~Gv~fveA~~~~~l~~~~~~~--~~~~~~~l~P~~~~~~~~ 128 (447)
T PLN03157 53 IIEILKDSLSRALVPFYPLAGRLRWIGG-GRLELEC-NAMGVLLIEAESEAKLDDFGDFS--PTPEFEYLIPSVDYTKPI 128 (447)
T ss_pred HHHHHHHHHHHHHhhccccCEEEEEcCC-CcEEEEE-CCCCeEEEEEEeCCcHHHhhccC--CCHHHHhhcCCCCccccc
Confidence 5789999999999999999999998875 8999999 89999999999999999996432 3456778998764
Q ss_pred CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCCCCCCCCCCccCCCC
Q 036098 78 HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHRLEDLPCHEKVLVED 140 (182)
Q Consensus 78 ~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~~~~~P~~dR~~l~~ 140 (182)
...|+++||||+|.|||++||+++||.++||.|+.+||++||++|||.+...+|++||++++.
T Consensus 129 ~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~rg~~~~~~P~~dR~~l~~ 191 (447)
T PLN03157 129 HELPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWARIARGEPLGTVPFLDRKVLRA 191 (447)
T ss_pred ccCceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHHHhcCCCCCCCCccCcccccC
Confidence 357999999999999999999999999999999999999999999998767789999998863
No 2
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=99.98 E-value=5.5e-32 Score=240.28 Aligned_cols=132 Identities=25% Similarity=0.383 Sum_probs=117.0
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhcccCcC-----C
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHLLSEET-----H 78 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~-----~ 78 (182)
.++||+||+++|++||||||||+.+++ |+++|+| |++||.|++|+++.+++++....+ ...+..++|..+ .
T Consensus 53 ~~~Lk~sLs~~L~~~yplaGRl~~~~~-g~~~i~c-~~~Gv~fv~A~~~~~l~~~~~~~~--~~~~~~l~P~~~~~~~~~ 128 (431)
T PLN02663 53 PQVMKEALSKALVPFYPMAGRLRRDED-GRIEIDC-NAEGVLFVEADTPSVIDDFGDFAP--TLELRQLIPTVDYSGGIS 128 (431)
T ss_pred HHHHHHHHHHHHhhccccceeeeECCC-CCEEEEE-CCCCceEEEEecCCCHHHhhccCC--CHHHHhhcCCCCCccccc
Confidence 478999999999999999999999876 8999999 899999999999999999864323 245667888654 3
Q ss_pred CCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCCCCCCCCCCccCCC
Q 036098 79 AVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHRLEDLPCHEKVLVE 139 (182)
Q Consensus 79 ~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~~~~~P~~dR~~l~ 139 (182)
+.|++++|||+|.|||++||+++||+++||.|+.+||++||++|||.+...+|++||++++
T Consensus 129 ~~P~l~vQvt~F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~~rg~~~~~~p~~dr~~l~ 189 (431)
T PLN02663 129 SYPLLVLQVTHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLR 189 (431)
T ss_pred cCceEEEEEEEeccCCEEEEEEecccccchHHHHHHHHHHHHHhcCCCCCCCCccCccccC
Confidence 5799999999999999999999999999999999999999999999866778999999875
No 3
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=99.98 E-value=9.1e-33 Score=243.31 Aligned_cols=135 Identities=28% Similarity=0.481 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhcccCcC-----
Q 036098 3 AESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHLLSEET----- 77 (182)
Q Consensus 3 ~v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~----- 77 (182)
+++.||+||++||++|||||||| .++ +++++|+| ||+||.|++|+++.+++++.... .+...+..|+|..+
T Consensus 54 ~~~~Lk~sLs~~L~~~~~lAGrl-~~~-~~~~~i~c-~d~Gv~f~~a~~~~~l~~~~~~~-~~~~~~~~l~p~~~~~~~~ 129 (432)
T PF02458_consen 54 IVDNLKESLSKTLVHYYPLAGRL-RDP-DGRLEIDC-NDDGVEFVEAEADGTLDDLLDLE-PPSEFLRDLVPQLPVSSEG 129 (432)
T ss_dssp HHHHHHHHHHHHHTTSGGGGSEE-ESS-CTTTEEEE-CTTTEEEEEEEESS-HHHHCSSS-CCGGGGGGGSSS-SSSEEE
T ss_pred HHHHHHHHHHHhHhhCcccCcEE-ccc-ccceEEEE-ecCCCEEEEEecccceeeccccc-cchHHHHHHhhhcccCCcc
Confidence 57899999999999999999999 666 59999999 89999999999999999998755 44555677888754
Q ss_pred CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccC-CCCCCCCCCccCCCCC
Q 036098 78 HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTH-RLEDLPCHEKVLVEDP 141 (182)
Q Consensus 78 ~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~-~~~~~P~~dR~~l~~p 141 (182)
...|+++||||+|+|||++||+++||.++||.|+.+||++||++||+. .....|.+||..+..+
T Consensus 130 ~~~Pll~vQvt~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~p~~~r~~~~~~ 194 (432)
T PF02458_consen 130 EDAPLLAVQVTRFKCGGLALGVSFHHAVADGTGFSQFLKAWAEICRGGSPPSPPPVFDRSLLLPP 194 (432)
T ss_dssp TTEBSEEEEEEEETTTEEEEEEEEETTT--HHHHHHHHHHHHHHHHTTCHHHHHHCHSSTTSS-S
T ss_pred cccceeEeeeeeecccceeeeeeceeccCcccchhHHHHHHHhhhcCCcccccccccchHHhhhc
Confidence 468999999999999999999999999999999999999999999998 3346688999888765
No 4
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=99.98 E-value=3.8e-32 Score=242.07 Aligned_cols=139 Identities=21% Similarity=0.398 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecCCchhhhhcc-CCCCchhhhhcccCcC---
Q 036098 2 AAESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESDSDFNHLTAN-QARDNTVFHHLLSEET--- 77 (182)
Q Consensus 2 ~~v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~~~~~~l~~~-~p~~~~~~~~l~P~~~--- 77 (182)
.++++||+||+++|.+||||||||+.+++ |+++|+| |++||.|++|+++.+++++... .| +...+..|+|..+
T Consensus 62 ~~~~~Lk~sLs~~L~~~~plAGRL~~~~~-g~~~i~c-~~~Gv~fvea~~d~~l~~l~~~~~p-~~~~~~~l~~~~~~~~ 138 (436)
T PLN02481 62 DPVDVIKKALSKVLVHYYPLAGRLTISSE-GKLIVDC-TGEGVVFVEAEANCSIEEIGDITKP-DPETLGKLVYDVPGAK 138 (436)
T ss_pred CHHHHHHHHHHHHhccccCCCCeeeeCCC-CcEEEEE-cCCCeEEEEEEecCcHHHhccccCC-CCHHHHHhCCCCCCcc
Confidence 36899999999999999999999999875 8899999 8999999999999999998542 33 3345677777654
Q ss_pred --CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCCCCCCCCCCccCCC--CCCc
Q 036098 78 --HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHRLEDLPCHEKVLVE--DPDG 143 (182)
Q Consensus 78 --~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~~~~~P~~dR~~l~--~p~~ 143 (182)
...|++.+|||+|.|||++||+++||.++||.|+.+||++||++|||.+...+|++||++++ +|+.
T Consensus 139 ~~~~~Pll~vQvT~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~p~~dr~~l~~~~pp~ 208 (436)
T PLN02481 139 NILEIPPLTAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETARGLPLSVPPFLDRSILRARNPPK 208 (436)
T ss_pred cccccceeeeccceEecCcEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCCCCCcCcccCCCCCCCC
Confidence 35799999999999999999999999999999999999999999999876778999999886 5543
No 5
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=233.44 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhcccCcC----
Q 036098 2 AAESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHLLSEET---- 77 (182)
Q Consensus 2 ~~v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~---- 77 (182)
.++++||+||++||++||||||||+. +++|+| |++||.|+||+++.+++++.. .+ +...+..|+|..+
T Consensus 56 ~~~~~Lk~sLs~~L~~fyplAGRl~~-----~~~i~c-n~~Gv~fveA~~~~~l~d~l~-~~-~~~~~~~l~p~~~~~~~ 127 (444)
T PLN00140 56 QISIQLKRSLSETLSTFYPFSGRVKD-----NLIIDN-YEEGVPFFETRVKGSLSDFLK-HP-QLELLNKFLPCQPFSYE 127 (444)
T ss_pred hHHHHHHHHHHHHHhhhhccCccccC-----CceeEc-cCCCceEEEEEecCcHHHhcC-CC-CHHHHHhhCCCCccccc
Confidence 35789999999999999999999984 589999 899999999999999988854 23 2234566776432
Q ss_pred ---CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCCC-CCCCCCCcc
Q 036098 78 ---HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHRL-EDLPCHEKV 136 (182)
Q Consensus 78 ---~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~~-~~~P~~dR~ 136 (182)
...|+++||||+|+|||++||+++||+++||.|+.+||++||++|||.+. ...|.|||.
T Consensus 128 ~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~rg~~~~~~~P~~dr~ 190 (444)
T PLN00140 128 SDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGHYSEVINPDLFEA 190 (444)
T ss_pred CCccCCceEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 34799999999999999999999999999999999999999999999753 567999996
No 6
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=97.42 E-value=0.00078 Score=55.06 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCC--CceEEEEEecCC-chhhhhccCCCCchhhhhcccCcC-CC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKG--DSVLVSVAESDS-DFNHLTANQARDNTVFHHLLSEET-HA 79 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~--~gV~f~~a~~~~-~~~~l~~~~p~~~~~~~~l~P~~~-~~ 79 (182)
+++|++++.+++...|.|-.++...+. +......... ..+......... ...++... ......-.++ ..
T Consensus 41 ~~~l~~A~~~~~~~h~~Lr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~ 113 (301)
T PF00668_consen 41 IERLRQALERLIARHPILRTRFEEDDG-FEPYQRVLESSSIEIEYIDVSSDSDSEEEILEL------IEQELNRPFDLSE 113 (301)
T ss_dssp HHHHHHHHHHHHHH-GGGGEEEEECTT-CSSEEEEESEEETTCEEEECCTS-HHHHHHHHH------HHHHHCC---TCT
T ss_pred hHHHhhhhHhhhhhhhhhhheeeeecc-cccceeeeeccccccccccccccccchhhhhhh------hhhhhhhcccccc
Confidence 578999999999999999999998764 2332222111 223222222111 11111100 0001111122 34
Q ss_pred CCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCC
Q 036098 80 VPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHR 126 (182)
Q Consensus 80 ~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~ 126 (182)
.|++.+.+-....++..|.+.+||.++||.|+..|++.+..++.+..
T Consensus 114 ~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~~~ 160 (301)
T PF00668_consen 114 GPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAGLS 160 (301)
T ss_dssp SBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHHHH
T ss_pred cchhhccccccccccchhcccccccccccccchhhhhhhHHhhhccc
Confidence 57887877777666999999999999999999999999999998853
No 7
>PRK09294 acyltransferase PapA5; Provisional
Probab=97.40 E-value=0.0019 Score=57.07 Aligned_cols=101 Identities=15% Similarity=0.117 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCC--CceEEEEEecCCchhhhhccCCCCchhhhhcccCcC--CC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKG--DSVLVSVAESDSDFNHLTANQARDNTVFHHLLSEET--HA 79 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~--~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~--~~ 79 (182)
.+.|+++|.+++..+|-|..++....+ +.+.+...+. ..+.++..+... + .+.++ ..
T Consensus 36 ~~~L~~Al~~l~~rhp~Lr~~~~~~~~-~~~~~~~~~~~~~~v~~~d~~~~~---~---------------~~~~~l~~~ 96 (416)
T PRK09294 36 IDALSDAFDALLRAHPVLAAHLEQDSD-GGWELVADDLLHPGIVVVDGDAAR---P---------------LPELQLDQG 96 (416)
T ss_pred HHHHHHHHHHHHHhCHHhhEEEEECCC-CceEEeeCCcCCCCeEEEeccccc---c---------------cCCCCCCCC
Confidence 478999999999999999999965543 4444333111 223322221100 0 11111 22
Q ss_pred CCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 80 VPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 80 ~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
.+++.+.+.. .+++..|.+.+||.++||.|+..|++.+.+.+..
T Consensus 97 ~~l~~~~~~~-~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~~ 140 (416)
T PRK09294 97 VSLLALDVVP-DDGGARVTLYIHHSIADAHHSASLLDELWSRYTD 140 (416)
T ss_pred CceEEEEEEE-cCCCEEEEEEeccEeEccccHHHHHHHHHHHHHH
Confidence 3466665543 4678899999999999999999999999998763
No 8
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=96.83 E-value=0.0079 Score=53.73 Aligned_cols=115 Identities=15% Similarity=0.164 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCce-EEeccCCCceE--EEEEecCCchhhhhccCCCCchhhhhcccCcCCCC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHS-YISYKKGDSVL--VSVAESDSDFNHLTANQARDNTVFHHLLSEETHAV 80 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~-~I~~~~~~gV~--f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~ 80 (182)
++.||.||.-+...-|.|+.+.........+ +|...+-+.+. +.+...+.+|.+.. ...|-..-+......
T Consensus 39 i~~lkkAl~~svka~piL~c~f~eg~~~~~Wq~i~d~~v~~~~i~l~~t~~~~~~~E~~------fs~Fi~~k~~~t~~~ 112 (439)
T COG4908 39 IDRLKKALRYSVKAVPILSCKFSEGEKRPFWQRILDFEVDQIAIHLEETKTDEPFGEVA------FSRFIVRKLNITKES 112 (439)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccchhHHHHhcccccceeEEEeeecccccchhHH------HHHHHhcccccccCC
Confidence 5789999999999999999988544321222 12221223322 22223344444432 111111112211347
Q ss_pred CeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccC
Q 036098 81 PSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTH 125 (182)
Q Consensus 81 Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~ 125 (182)
|++.+-+++- +-|=.|.+.+||+++||.|+.+.+...+.+....
T Consensus 113 PqI~v~~~r~-~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L 156 (439)
T COG4908 113 PQIKVFVVRQ-TVGDTLVINLHHAVCDGRGFLEYLYLLARLYSKL 156 (439)
T ss_pred CeEEEeeehh-ccCcEEEEEechhhhcchhHHHHHHHHHHHHHhc
Confidence 8888888887 7888899999999999999999999999999654
No 9
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=96.49 E-value=0.015 Score=48.86 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhhhhhcCCceEEEcCCC-CCceEEeccCCCc----eEEEEEecCCchhhhhccCCCCchhhhhcc-cCc
Q 036098 3 AESSYRHSLSLTLRHFFPFAANLICPPP-PNHSYISYKKGDS----VLVSVAESDSDFNHLTANQARDNTVFHHLL-SEE 76 (182)
Q Consensus 3 ~v~~Lk~sLs~tL~~fppLAGrL~~~~~-~g~~~I~~~~~~g----V~f~~a~~~~~~~~l~~~~p~~~~~~~~l~-P~~ 76 (182)
.++.|++-+...+..+|.|.-|+...+. .+++...-.++=- |..+......+.++|.. ....+. ..+
T Consensus 37 ~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~~Hv~~~~l~~pg~~~~l~~-------~v~~l~~~pL 109 (263)
T PF03007_consen 37 DVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLDYHVRRVALPAPGDRAELQA-------LVSRLASTPL 109 (263)
T ss_pred hHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChHHceEEecCCCCCCHHHHHH-------HHHHHhcCCC
Confidence 3678999999999999999999987542 2444443212111 11111111112122110 001111 112
Q ss_pred CCCCCeeEEEEEE-ecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 77 THAVPSMAVQVTV-FPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 77 ~~~~Pll~vQvT~-f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+...|+=.+.+-. +..|+++|-+.+||+++||.+..+++..+......
T Consensus 110 d~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~~~ 158 (263)
T PF03007_consen 110 DRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLDRSPD 158 (263)
T ss_pred CCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhCCCCC
Confidence 2345554333322 44577999999999999999999999877665443
No 10
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=95.77 E-value=0.016 Score=51.47 Aligned_cols=112 Identities=14% Similarity=0.082 Sum_probs=65.6
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCC-CCce-EEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhcc-----cCc
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPP-PNHS-YISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHLL-----SEE 76 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~-~g~~-~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l~-----P~~ 76 (182)
.+.|++++...+..++.|.-++...+. .+.+ ++.. ....+.+.+... ++.. +.....+..++ -.+
T Consensus 32 ~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~-----~~~~--~~~~~~~~~~~~~~~~~p~ 103 (446)
T TIGR02946 32 FEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVED-PDFDLDYHVRRV-----ALPA--PGTRRELLELVGRLMSTPL 103 (446)
T ss_pred HHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeC-CCCChHHhhccc-----cCCC--CCCHHHHHHHHHHHhcCCC
Confidence 468999999999999999888875421 1332 2221 111111111000 0100 00011111111 112
Q ss_pred CCCCCeeEEEEEE-ecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 77 THAVPSMAVQVTV-FPNSGISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 77 ~~~~Pll~vQvT~-f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+...|++.+.+.. +..+...+-+.+||.++||.|+..|++.+.....
T Consensus 104 dl~~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~ 151 (446)
T TIGR02946 104 DRSRPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDP 151 (446)
T ss_pred CCCCCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCC
Confidence 2234888777777 6668899999999999999999999987776654
No 11
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=94.84 E-value=0.29 Score=48.94 Aligned_cols=111 Identities=9% Similarity=0.010 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCce-EEeccCCCce---EEEEEecCCch-hhhhccCCCCchhhh-hcccCcC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHS-YISYKKGDSV---LVSVAESDSDF-NHLTANQARDNTVFH-HLLSEET 77 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~-~I~~~~~~gV---~f~~a~~~~~~-~~l~~~~p~~~~~~~-~l~P~~~ 77 (182)
+++|+++|...+..++-|--++.... |.+ .+.. +...+ .++......+- ..+. ..+. ...-.++
T Consensus 44 ~~~l~~Al~~lv~rh~~LRt~f~~~~--g~~~q~v~-~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~fd 113 (1296)
T PRK10252 44 APLLARAVVAGLAEADTLRMRFTEDN--GEVWQWVD-PALTFPLPEIIDLRTQPDPHAAAQ-------ALMQADLQQDLR 113 (1296)
T ss_pred HHHHHHHHHHHHHhccceEEEEEcCC--CeEEEEEC-CCCCCCcCceeecCCCCCHHHHHH-------HHHHHHhcCCcC
Confidence 47899999999999999988887542 333 3332 22211 12111100000 0000 0000 1111222
Q ss_pred -CC-CCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 78 -HA-VPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 78 -~~-~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
.. .|++.+.+.+...+...+-+++||.++||.|+..+++.+++++++
T Consensus 114 l~~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~ 162 (1296)
T PRK10252 114 VDSGKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCA 162 (1296)
T ss_pred CCCCCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHH
Confidence 34 489999999887788999999999999999999999999988864
No 12
>PRK12467 peptide synthase; Provisional
Probab=93.94 E-value=0.32 Score=54.56 Aligned_cols=113 Identities=9% Similarity=0.046 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCC-CceEEeccCCCceEEEEEecC--C----chhhhhccCCCCchhhhhcccCc
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPP-NHSYISYKKGDSVLVSVAESD--S----DFNHLTANQARDNTVFHHLLSEE 76 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~-g~~~I~~~~~~gV~f~~a~~~--~----~~~~l~~~~p~~~~~~~~l~P~~ 76 (182)
+++|++++..++...+.|--++...... .-..+.. ....+.+.+.+.. . .++++... ..-..+
T Consensus 2682 ~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~f 2751 (3956)
T PRK12467 2682 VERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVY-KQARLPFSRLDWRDRADLEQALDALAAA---------DRQQGF 2751 (3956)
T ss_pred HHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEc-ccccCceeEeecccchhHHHHHHHHHHh---------hhhcCC
Confidence 5789999999999999998888765421 2234444 2222333222110 0 01111100 000112
Q ss_pred C-CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCC
Q 036098 77 T-HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHR 126 (182)
Q Consensus 77 ~-~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~ 126 (182)
+ ...|++.+.+-+...+...+-+++||.++||.|+.-+++.+.+.+++..
T Consensus 2752 dl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~~~ 2802 (3956)
T PRK12467 2752 DLLSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFGQP 2802 (3956)
T ss_pred CCCCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcCCC
Confidence 2 5678888888888778888999999999999999999999999998764
No 13
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=93.33 E-value=0.53 Score=42.31 Aligned_cols=43 Identities=21% Similarity=0.117 Sum_probs=33.4
Q ss_pred CCeeEEEEEEecCC----cEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 80 VPSMAVQVTVFPNS----GISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 80 ~Pll~vQvT~f~~g----G~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
.|+- ++..++.. ..-|.+.+||+++||.|...|.+..-+..+.
T Consensus 124 ~P~W--rl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~ 170 (480)
T PF07247_consen 124 KPLW--RLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEALNS 170 (480)
T ss_pred CCCe--EEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHHHhh
Confidence 3655 45666543 4678999999999999999999988777664
No 14
>PRK12316 peptide synthase; Provisional
Probab=92.45 E-value=1.1 Score=51.63 Aligned_cols=113 Identities=9% Similarity=0.017 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCC-ceEEeccCCCceEEEEEecCC------chhhhhccCCCCchhhhhcccCc
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPN-HSYISYKKGDSVLVSVAESDS------DFNHLTANQARDNTVFHHLLSEE 76 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g-~~~I~~~~~~gV~f~~a~~~~------~~~~l~~~~p~~~~~~~~l~P~~ 76 (182)
+++|++++..++...+.|--++......+ .+.+.. .+..+.+.+.+... .++.+... ..-..+
T Consensus 4138 ~~~l~~Aw~~vv~rh~iLRT~f~~~~~~~~~~QvV~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~f 4207 (5163)
T PRK12316 4138 VERFRAAWQAALDRHDVLRSGFVWQGELGRPLQVVH-KQVSLPFAELDWRGRADLQAALDALAAA---------ERERGF 4207 (5163)
T ss_pred HHHHHHHHHHHHHhhhHhheEEEecCCCCCceEEec-ccccCceEeccCCchhhHHHHHHHHHHH---------HHhCCC
Confidence 57899999999999999988887654222 244444 23223333222110 11111100 000112
Q ss_pred C-CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhccCC
Q 036098 77 T-HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVTHR 126 (182)
Q Consensus 77 ~-~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~~~ 126 (182)
+ ...|++.+-+-....+...+.+++||.+.||.|+..+++.+..++.+..
T Consensus 4208 dl~~~pl~R~~l~~~~~~~~~l~l~~HH~i~DGwS~~il~~el~~~Y~~~~ 4258 (5163)
T PRK12316 4208 DLQRAPLLRLVLVRTAEGRHHLIYTNHHILMDGWSNSQLLGEVLERYSGRP 4258 (5163)
T ss_pred CcCCCCceEEEEEEEcCCEEEEEEEccceeeccccHHHHHHHHHHHhcCCC
Confidence 2 4667887777777777888999999999999999999999999998864
No 15
>PRK05691 peptide synthase; Validated
Probab=92.19 E-value=0.65 Score=52.52 Aligned_cols=111 Identities=5% Similarity=0.015 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEecC----C----chhhhhccCCCCchhhhhcccC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAESD----S----DFNHLTANQARDNTVFHHLLSE 75 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~~----~----~~~~l~~~~p~~~~~~~~l~P~ 75 (182)
+++|++++..+....+.|--++......+-.++.. ......+.+.+.. . .++.+.. ......
T Consensus 3294 ~~~l~~Aw~~vv~rh~~LRT~f~~~~~~~~~Qvv~-~~~~~~~~~~d~~~~~~~~~~~~l~~~~~---------~~~~~~ 3363 (4334)
T PRK05691 3294 PERFAQAWQAVVARHEALRASFSWNAGETMLQVIH-KPGRTPIDYLDWRGLPEDGQEQRLQALHK---------QEREAG 3363 (4334)
T ss_pred HHHHHHHHHHHHHHhHHhheEeeecCCCCcEEEEc-cCCCCceeEeecccCChhhhHHHHHHHHH---------HHHhCC
Confidence 46899999999999999988887654322234444 2222222222110 0 0111110 001111
Q ss_pred cC-CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 76 ET-HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 76 ~~-~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
++ ...|++.+.+.....+...+-+++||.+.||.|+.-+++.+..++.+
T Consensus 3364 fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~DGwS~~ll~~dl~~~Y~~ 3413 (4334)
T PRK05691 3364 FDLLNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFEIYTA 3413 (4334)
T ss_pred CCcCCCCcEEEEEEEecCcEEEEEEEehhhhhccccHHHHHHHHHHHHHH
Confidence 22 46788888877776677889999999999999999999999998853
No 16
>PRK12316 peptide synthase; Provisional
Probab=91.98 E-value=0.85 Score=52.43 Aligned_cols=112 Identities=7% Similarity=0.071 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCceEEeccCCCceEEEEEec-CCchhhhhccCCCCchhhh-hcccCcC-CCC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHSYISYKKGDSVLVSVAES-DSDFNHLTANQARDNTVFH-HLLSEET-HAV 80 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~~I~~~~~~gV~f~~a~~-~~~~~~l~~~~p~~~~~~~-~l~P~~~-~~~ 80 (182)
+++|++++..++...+.|--++..... +...+.. +.....+...+. +..-+.+.. .+. ..--.++ ...
T Consensus 2639 ~~~L~~A~~~lv~rH~~LRt~f~~~~~-~~~q~v~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~fdl~~~ 2709 (5163)
T PRK12316 2639 QAALEQAFDALVLRHETLRTRFVEVGE-QTRQVIL-PNMSLRIVLEDCAGVADAAIRQ-------RVAEEIQRPFDLARG 2709 (5163)
T ss_pred HHHHHHHHHHHHHHhhHhhcceeeeCC-eEEEEEC-CCCCccceeeccccCCHHHHHH-------HHHHHhhCCCCCCCC
Confidence 468999999999999999888765432 2233333 222221111111 111011100 000 0111122 466
Q ss_pred CeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 81 PSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 81 Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
|++.+.+-....+...+.+++||.++||.|+..|++.+..++++
T Consensus 2710 pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~eL~~~Y~~ 2753 (5163)
T PRK12316 2710 PLLRVRLLALDGQEHVLVITQHHIVSDGWSMQVMVDELVQAYAG 2753 (5163)
T ss_pred CcEEEEEEEECCCeEEEEEecCcCcccHhHHHHHHHHHHHHHHH
Confidence 88888777776677889999999999999999999999999876
No 17
>PRK12467 peptide synthase; Provisional
Probab=91.93 E-value=0.77 Score=51.66 Aligned_cols=112 Identities=8% Similarity=0.108 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCce-EEeccCCCceEEEEEecCCchhhhhccCCCCchhhhh-----cccCcC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNHS-YISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHH-----LLSEET 77 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~~-~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~-----l~P~~~ 77 (182)
++.|++++..++...+-|--++.... +.+ .+.. +...+.+.+.+.+ ..... .....+.. ..-.++
T Consensus 86 ~~~L~~A~~~vv~rH~~LRt~f~~~~--~~~~q~v~-~~~~~~i~~~d~~----~~~~~--~~~~~~~~~~~~~~~~~fd 156 (3956)
T PRK12467 86 VSALRRAFDALVARHESLRTRFVQDE--EGFRQVID-ASLSLTIPLDDLA----NEQGR--ARESQIEAYINEEVARPFD 156 (3956)
T ss_pred HHHHHHHHHHHHHHhhhheEEEEecC--CeEEEEEc-CCCCCceeEEecc----cCChh--hHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999998887543 333 2222 2222222221110 00000 00000111 111122
Q ss_pred -CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 78 -HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 78 -~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
...|++.+.+-....+...+-+++||.++||.|+.-+++..++.+.+
T Consensus 157 L~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~~ 204 (3956)
T PRK12467 157 LANGPLLRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYSA 204 (3956)
T ss_pred CCCCCceEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHHH
Confidence 56788888888777788899999999999999999999999988753
No 18
>PRK05691 peptide synthase; Validated
Probab=90.69 E-value=1.2 Score=50.64 Aligned_cols=112 Identities=6% Similarity=0.073 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhhhhhcCCceEEEcCCCCCc-eEEeccCCCceEEEEEecCCchhhhhccCCCCchhhhhc-----ccCcC
Q 036098 4 ESSYRHSLSLTLRHFFPFAANLICPPPPNH-SYISYKKGDSVLVSVAESDSDFNHLTANQARDNTVFHHL-----LSEET 77 (182)
Q Consensus 4 v~~Lk~sLs~tL~~fppLAGrL~~~~~~g~-~~I~~~~~~gV~f~~a~~~~~~~~l~~~~p~~~~~~~~l-----~P~~~ 77 (182)
+++|++++..++...+.|--++.... +. ..+.. ....+.+...+.. ++..... ...+..+ .-.++
T Consensus 1765 ~~~L~~A~~~lv~rH~~LRT~f~~~~--~~~~q~v~-~~~~~~~~~~d~~----~~~~~~~--~~~~~~~~~~~~~~~fd 1835 (4334)
T PRK05691 1765 VDRFEAALQALILRHETLRTTFPSVD--GVPVQQVA-EDSGLRMDWQDFS----ALPADAR--QQRLQQLADSEAHQPFD 1835 (4334)
T ss_pred HHHHHHHHHHHHHhCCcceEEEEccC--CeEEEEEC-CCCCCCeeEeecc----CCChHhH--HHHHHHHHHHHHhcCCC
Confidence 46899999999999999988886543 33 23333 2222333222211 0000000 0000001 01122
Q ss_pred -CCCCeeEEEEEEecCCcEEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 78 -HAVPSMAVQVTVFPNSGISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 78 -~~~Pll~vQvT~f~~gG~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
...|++.+.+-....+...+-+++||.++||.|+..+++.++.++++
T Consensus 1836 l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~ 1883 (4334)
T PRK05691 1836 LERGPLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEA 1883 (4334)
T ss_pred CCCCceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHH
Confidence 45678877777766667889999999999999999999999999864
No 19
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=83.15 E-value=1.2 Score=36.78 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=25.3
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHh
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMS 122 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~ 122 (182)
+-|++..||+++||.=...|++...+.+
T Consensus 185 mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~ 212 (219)
T PRK13757 185 MPLAIQVHHAVCDGFHVGRMLNELQQYC 212 (219)
T ss_pred EEEEEEEehhccchHHHHHHHHHHHHHH
Confidence 7889999999999999999999887765
No 20
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=77.06 E-value=2 Score=38.29 Aligned_cols=29 Identities=14% Similarity=0.310 Sum_probs=26.5
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+-|++++||.++||.-...|++.|.+...
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~le 403 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELLE 403 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence 67999999999999999999999988764
No 21
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=76.42 E-value=2.1 Score=34.86 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=25.3
Q ss_pred CCCeeEE-EEEEecCCc---EEEEeeeecCCCCcCcHHHHHHHH
Q 036098 79 AVPSMAV-QVTVFPNSG---ISIGIAVNDVAADGRSFNHFVKFW 118 (182)
Q Consensus 79 ~~Pll~v-QvT~f~~gG---~~lgv~~hH~v~Dg~s~~~Fl~aW 118 (182)
..|.+.. +.+. .+| +-|++..||+++||.=..+|++..
T Consensus 164 ~~P~it~GK~~~--~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 164 SIPRITWGKYFE--ENGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp SS-EEEEE--EE--ETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred cccEEEeeeeEe--ECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 4566654 4443 355 889999999999999999998754
No 22
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=71.66 E-value=3.3 Score=38.55 Aligned_cols=29 Identities=10% Similarity=0.370 Sum_probs=26.2
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+-|++++||.+.||.-...||+.|.+...
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~le 540 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLLA 540 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence 55899999999999999999999998764
No 23
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=61.65 E-value=6.4 Score=37.36 Aligned_cols=30 Identities=10% Similarity=0.226 Sum_probs=26.5
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|+++++|.+.||.-...|++.|.+....
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~LE~ 627 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRLSD 627 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHHhC
Confidence 348999999999999999999999987653
No 24
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=59.86 E-value=9.7 Score=31.45 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=25.8
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...|++.+.+....
T Consensus 196 ~~lslt~DHRvidG~~aa~Fl~~l~~~le~ 225 (231)
T PF00198_consen 196 MNLSLTFDHRVIDGAEAARFLKDLKELLEN 225 (231)
T ss_dssp EEEEEEEETTTS-HHHHHHHHHHHHHHHHS
T ss_pred EEeEEeccceEEcHHHHHHHHHHHHHHHhC
Confidence 568899999999999999999999987653
No 25
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=55.26 E-value=10 Score=34.21 Aligned_cols=30 Identities=20% Similarity=0.441 Sum_probs=26.6
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...||+.|.+....
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~le~ 407 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYVEK 407 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999987653
No 26
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=54.27 E-value=11 Score=34.26 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=26.6
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...|++.|.++...
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 429 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYLEN 429 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999987643
No 27
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=53.23 E-value=11 Score=32.63 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=26.7
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-..+|++.|.+....
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~LE~ 299 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELLEK 299 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 458899999999999999999999988654
No 28
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=52.13 E-value=18 Score=29.79 Aligned_cols=29 Identities=7% Similarity=0.244 Sum_probs=23.9
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+-++|..||+.+||.=+.+|++.......
T Consensus 184 lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~ 212 (219)
T COG4845 184 LPLAVQAHHANVDGFHIGQLFDQLQTLFS 212 (219)
T ss_pred EeEEEEecccccchhhHHHHHHHHHHHhc
Confidence 45788999999999999999987665543
No 29
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=48.74 E-value=14 Score=32.58 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=26.2
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...|++.|.+....
T Consensus 312 m~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 341 (347)
T PRK14843 312 MSLGLTIDHRVVDGMAGAKFMKDLKELIET 341 (347)
T ss_pred EEEEEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 348899999999999999999999987643
No 30
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=47.83 E-value=16 Score=32.86 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=26.0
Q ss_pred EEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 96 SIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 96 ~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
-|++++.|-+.||.-...||+.|.+....
T Consensus 371 ~lsls~DHRviDGa~aa~Fl~~l~~~le~ 399 (407)
T PRK05704 371 YLALSYDHRIIDGKEAVGFLVTIKELLED 399 (407)
T ss_pred EEEEEechhhhCcHHHHHHHHHHHHHhhC
Confidence 48999999999999999999999987653
No 31
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=47.48 E-value=16 Score=32.85 Aligned_cols=30 Identities=10% Similarity=0.184 Sum_probs=26.5
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...||+.|.++...
T Consensus 366 m~lsLt~DHRviDGa~aa~Fl~~l~~~le~ 395 (403)
T TIGR01347 366 MYLALSYDHRLIDGKEAVTFLVTIKELLED 395 (403)
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHhcC
Confidence 348999999999999999999999987653
No 32
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=46.26 E-value=16 Score=33.03 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=26.7
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...|++.|.+.-..
T Consensus 381 m~lsLs~DHRviDGa~AA~FL~~lk~~LE~ 410 (418)
T PTZ00144 381 MYLALTYDHRLIDGRDAVTFLKKIKDLIED 410 (418)
T ss_pred EEEEEecchhhhChHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999987543
No 33
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=45.30 E-value=17 Score=34.31 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=26.5
Q ss_pred EEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 96 SIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 96 ~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
-|++++.|.+.||.....||+.|.+....
T Consensus 553 ~lsls~DHRviDGa~aa~Fl~~lk~~LE~ 581 (590)
T TIGR02927 553 HLPLTYDHQLIDGADAGRFLTTIKDRLEE 581 (590)
T ss_pred EEeeeccchhcCcHHHHHHHHHHHHHHhC
Confidence 38999999999999999999999988764
No 34
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=45.13 E-value=17 Score=33.93 Aligned_cols=29 Identities=10% Similarity=0.300 Sum_probs=25.9
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+-|++++.|-+.||.-...||+.|.+...
T Consensus 511 m~ltls~DHRviDGa~aa~Fl~~~~~~le 539 (546)
T TIGR01348 511 LPLSLSYDHRVIDGADAARFTTYICESLA 539 (546)
T ss_pred EEEeEeccchhcChHHHHHHHHHHHHHHh
Confidence 34899999999999999999999998754
No 35
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=43.37 E-value=18 Score=33.18 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=26.8
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhcc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSVT 124 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r~ 124 (182)
+-|++++.|-+.||.-...|++.|.++-..
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~LE~ 455 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVVED 455 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999987643
No 36
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=42.03 E-value=19 Score=33.68 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=26.2
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+-|++++.|.+.||.-...||+.|.+.-.
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~lk~~LE 532 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 532 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45899999999999999999999998754
No 37
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=32.20 E-value=39 Score=30.23 Aligned_cols=29 Identities=14% Similarity=0.369 Sum_probs=25.3
Q ss_pred EEEEeeeecCCCCcCcHHHHHHHHHHHhc
Q 036098 95 ISIGIAVNDVAADGRSFNHFVKFWASMSV 123 (182)
Q Consensus 95 ~~lgv~~hH~v~Dg~s~~~Fl~aWA~~~r 123 (182)
+.+.++..|.|.||.++..|-+.|-+..-
T Consensus 436 M~VswsADHRViDGaTmarFsn~WK~YlE 464 (474)
T KOG0558|consen 436 MMVSWSADHRVIDGATMARFSNQWKEYLE 464 (474)
T ss_pred EEEEeecCceeeccHHHHHHHHHHHHHhh
Confidence 45678889999999999999999988754
No 38
>PRK09709 exonuclease VIII; Reviewed
Probab=27.93 E-value=68 Score=31.79 Aligned_cols=25 Identities=28% Similarity=0.444 Sum_probs=19.7
Q ss_pred HHHHhhccccCCCCC---CcccCCCCCC
Q 036098 148 YLNDWRNFLKNCSAP---SSANSGGGVT 172 (182)
Q Consensus 148 ~~~~~~~~~~~~~~~---~~~~~~~~~~ 172 (182)
+.++|.+-++.++.+ +-||.|||--
T Consensus 234 l~kew~~gn~~s~~~rt~sg~na~gg~~ 261 (877)
T PRK09709 234 LTKEWMKGNRVSHITRTASGANAGGGNL 261 (877)
T ss_pred HHHHHHhhCcCCcceecCCCCCCCCCcc
Confidence 678888888888766 8889888854
No 39
>COG4279 Uncharacterized conserved protein [Function unknown]
Probab=21.57 E-value=60 Score=27.59 Aligned_cols=28 Identities=25% Similarity=0.703 Sum_probs=20.3
Q ss_pred CCCchhHHHHHH--------hhccccCCCCCCcccC
Q 036098 140 DPDGLASIYLND--------WRNFLKNCSAPSSANS 167 (182)
Q Consensus 140 ~p~~l~~~~~~~--------~~~~~~~~~~~~~~~~ 167 (182)
-|+.+++.|... .......||-||.||.
T Consensus 100 mP~sIedvf~~~GL~LfP~t~~dl~~dCSCPD~anP 135 (266)
T COG4279 100 MPESIEDVFVGNGLSLFPFTLRDLSTDCSCPDYANP 135 (266)
T ss_pred CCchHHHHHHhcCcccCCCchhhcccccCCCCcccc
Confidence 466777777766 2335789999999985
Done!