BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036116
VCEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQIKSDAADAAMNKE

High Scoring Gene Products

Symbol, full name Information P value
AT4G35905 protein from Arabidopsis thaliana 2.8e-11
zgc:162634 gene_product from Danio rerio 0.00027
Pigy
phosphatidylinositol glycan anchor biosynthesis, class Y
gene from Rattus norvegicus 0.00072

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036116
        (53 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006561 - symbol:AT4G35905 "AT4G35905" speci...   155  2.8e-11   1
ZFIN|ZDB-GENE-050506-109 - symbol:zgc:162634 "zgc:162634"...    89  0.00027   1
UNIPROTKB|F1NX15 - symbol:F1NX15 "Uncharacterized protein...    87  0.00045   1
RGD|1565524 - symbol:Pigy "phosphatidylinositol glycan an...    85  0.00072   1


>TAIR|locus:505006561 [details] [associations]
            symbol:AT4G35905 "AT4G35905" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR
            eggNOG:NOG77141 HOGENOM:HOG000227338 InterPro:IPR005651
            Pfam:PF03966 EMBL:AY084495 EMBL:BT024532 EMBL:AK221001
            IPI:IPI00538998 RefSeq:NP_567992.1 UniGene:At.31373
            ProteinModelPortal:Q8LG27 SMR:Q8LG27 IntAct:Q8LG27 STRING:Q8LG27
            PRIDE:Q8LG27 DNASU:829745 EnsemblPlants:AT4G35905.1 GeneID:829745
            KEGG:ath:AT4G35905 TAIR:At4g35905 InParanoid:Q8LG27 OMA:PLRFCEK
            PhylomeDB:Q8LG27 ProtClustDB:CLSN2689779 Genevestigator:Q8LG27
            Uniprot:Q8LG27
        Length = 77

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:     2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQIKS 43
             CE+T SL+SD+IGVSFPIKDGIP LVPKDGKIL  + D  K+
Sbjct:    36 CEKTKSLVSDTIGVSFPIKDGIPCLVPKDGKILEEEGDASKA 77


>ZFIN|ZDB-GENE-050506-109 [details] [associations]
            symbol:zgc:162634 "zgc:162634" species:7955 "Danio
            rerio" [GO:0003674 "molecular_function" evidence=ND]
            ZFIN:ZDB-GENE-050506-109 InterPro:IPR005651 Pfam:PF03966
            GeneTree:ENSGT00390000015889 EMBL:CT033838 IPI:IPI00610214
            Ensembl:ENSDART00000067290 ArrayExpress:F1R0X4 Bgee:F1R0X4
            Uniprot:F1R0X4
        Length = 110

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 12/30 (40%), Positives = 26/30 (86%)

Query:     5 TNSLISDSIGVSFPIKDGIPSLVPKDGKIL 34
             +N LI++ +G+++PI DGIP+++P+D +++
Sbjct:    69 SNELINEELGIAYPIIDGIPNMIPQDARMI 98


>UNIPROTKB|F1NX15 [details] [associations]
            symbol:F1NX15 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000506
            "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase
            (GPI-GnT) complex" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=IEA] [GO:0006506 "GPI anchor biosynthetic process"
            evidence=IEA] [GO:0009893 "positive regulation of metabolic
            process" evidence=IEA] GO:GO:0005739 GO:GO:0005789 GO:GO:0006506
            GO:GO:0000506 GO:GO:0009893 InterPro:IPR005651 Pfam:PF03966
            GeneTree:ENSGT00390000015889 EMBL:AADN02016129 IPI:IPI00821320
            Ensembl:ENSGALT00000038373 Uniprot:F1NX15
        Length = 96

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 13/27 (48%), Positives = 23/27 (85%)

Query:     3 EETNSLISDSIGVSFPIKDGIPSLVPK 29
             E TN LI++ +G+++PI DGIP+++P+
Sbjct:    54 ESTNELINEELGIAYPIIDGIPNMIPE 80


>RGD|1565524 [details] [associations]
            symbol:Pigy "phosphatidylinositol glycan anchor biosynthesis,
            class Y" species:10116 "Rattus norvegicus" [GO:0000506
            "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase
            (GPI-GnT) complex" evidence=ISO;ISS] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=ISO;ISS] [GO:0005886 "plasma membrane" evidence=ISO]
            [GO:0006506 "GPI anchor biosynthetic process" evidence=ISO;ISS]
            [GO:0009893 "positive regulation of metabolic process"
            evidence=ISS] RGD:1565524 GO:GO:0005739 GO:GO:0005789 GO:GO:0006506
            GO:GO:0000506 GO:GO:0009893 CTD:84992 eggNOG:NOG77141
            HOGENOM:HOG000227338 HOVERGEN:HBG082168 OrthoDB:EOG4X0MV2
            InterPro:IPR005651 Pfam:PF03966 OMA:RCLHASG
            GeneTree:ENSGT00390000015889 EMBL:BC086361 IPI:IPI00192545
            RefSeq:NP_001019541.1 UniGene:Rn.204281 ProteinModelPortal:Q5U1Z8
            STRING:Q5U1Z8 PRIDE:Q5U1Z8 Ensembl:ENSRNOT00000008973 GeneID:502782
            KEGG:rno:502782 UCSC:RGD:1565524 InParanoid:Q5U1Z8 NextBio:712441
            Genevestigator:Q5U1Z8 GermOnline:ENSRNOG00000006858 Uniprot:Q5U1Z8
        Length = 112

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 12/25 (48%), Positives = 22/25 (88%)

Query:     5 TNSLISDSIGVSFPIKDGIPSLVPK 29
             TN LI+D +G+++PI DG+P+++P+
Sbjct:    71 TNELINDELGIAYPIIDGVPNMIPQ 95


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.133   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       53        53   0.00091  102 3  11 23  0.37    28
                                                     29  0.50    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  333 (36 KB)
  Total size of DFA:  57 KB (2059 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.73u 0.26s 5.99t   Elapsed:  00:00:00
  Total cpu time:  5.73u 0.26s 5.99t   Elapsed:  00:00:00
  Start:  Sat May 11 00:25:58 2013   End:  Sat May 11 00:25:58 2013

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