BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036116
(53 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M8Z2|PREY_XENTR Protein preY, mitochondrial OS=Xenopus tropicalis GN=pyurf PE=2
SV=1
Length = 122
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVD 37
E TN LI+D +G+++PI DGIP+++P+D +++ D
Sbjct: 76 ESTNELINDELGIAYPIVDGIPNMIPQDARMIHKD 110
>sp|Q5U1Z8|PREY_RAT Protein preY, mitochondrial OS=Rattus norvegicus GN=Pyurf PE=3 SV=1
Length = 112
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 5 TNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
TN LI+D +G+++PI DG+P+++P+ + + Q
Sbjct: 71 TNELINDELGIAYPIIDGVPNMIPQAARTTRQKEKQ 106
>sp|Q2T9V7|PREY_BOVIN Protein preY, mitochondrial OS=Bos taurus GN=PREY PE=3 SV=1
Length = 114
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 26/36 (72%)
Query: 5 TNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
TN LI++ +G+++PI DGIP+++P+ ++ + Q
Sbjct: 73 TNELINEELGIAYPIIDGIPNMIPQAARMTHQNKKQ 108
>sp|Q9D1C3|PREY_MOUSE Protein preY, mitochondrial OS=Mus musculus GN=Pyurf PE=3 SV=1
Length = 112
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 29/40 (72%)
Query: 5 TNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQIKSD 44
TN L+++ +G+++PI DGIP+++P+ + ++ Q +++
Sbjct: 71 TNELVNEELGIAYPIIDGIPNMIPQAARTTRQNEKQEEAE 110
>sp|Q96I23|PREY_HUMAN Protein preY, mitochondrial OS=Homo sapiens GN=PYURF PE=1 SV=1
Length = 114
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 5 TNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
TN LI++ +G+++PI DGIP+++P+ ++ Q
Sbjct: 73 TNELINEELGIAYPIIDGIPNMIPQAARMTRQSKKQ 108
>sp|A6V3B8|Y2181_PSEA7 UPF0434 protein PSPA7_2181 OS=Pseudomonas aeruginosa (strain PA7)
GN=PSPA7_2181 PE=3 SV=1
Length = 61
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 1 VCEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+ E+ + LIS G+++PI+DGIP ++ + + L VD+
Sbjct: 20 LSEDKSELISKQAGLAYPIRDGIPVMLESEARALNVDE 57
>sp|Q0AKH3|Y2939_MARMM UPF0434 protein Mmar10_2939 OS=Maricaulis maris (strain MCS10)
GN=Mmar10_2939 PE=3 SV=1
Length = 63
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKIL 34
E + LIS+ G+++P++DGIP ++P + + L
Sbjct: 30 REAHELISEGAGLAYPVRDGIPIMLPDEARQL 61
>sp|A9H298|Y182_GLUDA UPF0434 protein GDI0182/Gdia_2252 OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=GDI0182 PE=3 SV=1
Length = 63
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGV 36
E LIS G++FPI+DGIP ++P + + L V
Sbjct: 30 REAGELISRQAGLAFPIRDGIPIMLPDEARPLDV 63
>sp|Q5FSV8|Y764_GLUOX UPF0434 protein GOX0764 OS=Gluconobacter oxydans (strain 621H)
GN=GOX0764 PE=3 SV=1
Length = 59
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGK 32
ET LIS ++FPI+DGIP ++P++ +
Sbjct: 26 RETQELISPRAKLAFPIRDGIPIMLPEEAR 55
>sp|Q2SIN3|Y2705_HAHCH UPF0434 protein HCH_02705 OS=Hahella chejuensis (strain KCTC
2396) GN=HCH_02705 PE=3 SV=1
Length = 60
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
E L+ + G++FPI+DGIP ++ K+ + L D+
Sbjct: 22 REKQELVCKNDGMAFPIRDGIPVMLEKEARTLTTDE 57
>sp|Q9HZM4|Y2980_PSEAE UPF0434 protein PA2980 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2980 PE=3
SV=1
Length = 61
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1 VCEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+ E+ LIS G+++PI+DGIP ++ + + L VD+
Sbjct: 20 LSEDKTELISKQAGLAYPIRDGIPVMLESEARSLNVDE 57
>sp|Q02PE3|Y2552_PSEAB UPF0434 protein PA14_25520 OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=PA14_25520 PE=3 SV=1
Length = 61
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1 VCEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+ E+ LIS G+++PI+DGIP ++ + + L VD+
Sbjct: 20 LSEDKTELISKQAGLAYPIRDGIPVMLESEARSLNVDE 57
>sp|B7V148|Y2082_PSEA8 UPF0434 protein PLES_20821 OS=Pseudomonas aeruginosa (strain
LESB58) GN=PLES_20821 PE=3 SV=1
Length = 61
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1 VCEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+ E+ LIS G+++PI+DGIP ++ + + L VD+
Sbjct: 20 LSEDKTELISKQAGLAYPIRDGIPVMLESEARSLNVDE 57
>sp|A4XSR3|Y1615_PSEMY UPF0434 protein Pmen_1615 OS=Pseudomonas mendocina (strain ymp)
GN=Pmen_1615 PE=3 SV=1
Length = 61
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
E+ LIS GV++PI+DGIP ++ + + L D+
Sbjct: 22 EDKTELISKGAGVAYPIRDGIPVMLESEARTLTTDE 57
>sp|C6DFA3|Y1771_PECCP UPF0434 protein PC1_1771 OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=PC1_1771 PE=3 SV=1
Length = 60
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+E LI G+++P++DGIP L+ + + LGVD+
Sbjct: 22 KEKLELICKVDGLAYPVRDGIPVLLENEARKLGVDE 57
>sp|A4VMT4|Y2635_PSEU5 UPF0434 protein PST_2635 OS=Pseudomonas stutzeri (strain A1501)
GN=PST_2635 PE=3 SV=1
Length = 61
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
E+ + LI + G++FP++DGIP ++ + + L VD+
Sbjct: 22 EDKSELICKADGLAFPVRDGIPVMLESEARTLDVDE 57
>sp|A9BWI3|Y3569_DELAS UPF0434 protein Daci_3569 OS=Delftia acidovorans (strain DSM
14801 / SPH-1) GN=Daci_3569 PE=3 SV=1
Length = 60
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQIK 42
E L+S S +++P++DGIP L+ + + L DDD+++
Sbjct: 22 REHQELVSRSARLAYPVRDGIPVLLEAEARTL--DDDELE 59
>sp|Q11D83|Y3270_MESSB UPF0434 protein Meso_3270 OS=Mesorhizobium sp. (strain BNC1)
GN=Meso_3270 PE=3 SV=1
Length = 71
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 6 NSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
N LIS G+++P++DG+P ++P + + L D +
Sbjct: 36 NELISAKAGLAYPVRDGVPVMLPGEARPLEPDKPR 70
>sp|Q6D439|Y2555_ERWCT UPF0434 protein ECA2555 OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=ECA2555 PE=3 SV=1
Length = 60
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDD 38
+E LI + G+++P++DGIP L+ + + LG D+
Sbjct: 22 KEKLELICKADGLAYPVRDGIPVLLENEARKLGADE 57
>sp|Q0BVK2|Y252_GRABC UPF0434 protein GbCGDNIH1_0252 OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=GbCGDNIH1_0252 PE=3
SV=1
Length = 79
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 8 LISDSIGVSFPIKDGIPSLVPKDGKIL 34
LIS G+++PI+DGIP ++P++ + L
Sbjct: 51 LISRKAGLAYPIRDGIPIMLPEEARRL 77
>sp|A5E8U9|Y300_BRASB UPF0434 protein BBta_0300 OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=BBta_0300 PE=3 SV=1
Length = 65
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 6 NSLISDSIGVSFPIKDGIPSLVPKDGKILG 35
LIS S +++PI+DGIP ++P++ + +G
Sbjct: 36 QELISRSAKLAYPIRDGIPIMLPEEARKIG 65
>sp|B0UM25|Y487_METS4 UPF0434 protein M446_0487 OS=Methylobacterium sp. (strain 4-46)
GN=M446_0487 PE=3 SV=1
Length = 66
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 6 NSLISDSIGVSFPIKDGIPSLVPKDGKILG 35
LIS S +++PI+DGIP ++P++ + L
Sbjct: 36 QELISRSAKLAYPIRDGIPIMLPEEARPLA 65
>sp|Q13DZ7|Y454_RHOPS UPF0434 protein RPD_0454 OS=Rhodopseudomonas palustris (strain
BisB5) GN=RPD_0454 PE=3 SV=1
Length = 65
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 6 NSLISDSIGVSFPIKDGIPSLVPKDGKILG 35
LIS +++PI+DGIP ++P++ + LG
Sbjct: 36 QELISRGAKLAYPIRDGIPIMLPEEARKLG 65
>sp|B8IPV3|Y1613_METNO UPF0434 protein Mnod_1613 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=Mnod_1613 PE=3 SV=1
Length = 66
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 6 NSLISDSIGVSFPIKDGIPSLVPKDGKILG 35
LIS S +++PI+DGIP ++P++ + L
Sbjct: 36 QELISRSAKLAYPIRDGIPIMLPEEARPLA 65
>sp|Q3Z3K4|YCAR_SHISS UPF0434 protein YcaR OS=Shigella sonnei (strain Ss046) GN=ycaR
PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|P0AB00|YCAR_SHIFL UPF0434 protein YcaR OS=Shigella flexneri GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|Q0SWZ8|YCAR_SHIF8 UPF0434 protein YcaR OS=Shigella flexneri serotype 5b (strain
8401) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|Q32E37|YCAR_SHIDS UPF0434 protein YcaR OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|Q31YT3|YCAR_SHIBS UPF0434 protein YcaR OS=Shigella boydii serotype 4 (strain Sb227)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B2TUG2|YCAR_SHIB3 UPF0434 protein YcaR OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|Q1RDU1|YCAR_ECOUT UPF0434 protein YcaR OS=Escherichia coli (strain UTI89 / UPEC)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B1LJU6|YCAR_ECOSM UPF0434 protein YcaR OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B6I8Y9|YCAR_ECOSE UPF0434 protein YcaR OS=Escherichia coli (strain SE11) GN=ycaR
PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7NAR6|YCAR_ECOLU UPF0434 protein YcaR OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|P0AAZ7|YCAR_ECOLI UPF0434 protein YcaR OS=Escherichia coli (strain K12) GN=ycaR
PE=1 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B1IW14|YCAR_ECOLC UPF0434 protein YcaR OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|P0AAZ8|YCAR_ECOL6 UPF0434 protein YcaR OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|Q0TJD6|YCAR_ECOL5 UPF0434 protein YcaR OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|A7ZYL9|YCAR_ECOHS UPF0434 protein YcaR OS=Escherichia coli O9:H4 (strain HS)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B1X8M1|YCAR_ECODH UPF0434 protein YcaR OS=Escherichia coli (strain K12 / DH10B)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|C4ZQ43|YCAR_ECOBW UPF0434 protein YcaR OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7M846|YCAR_ECO8A UPF0434 protein YcaR OS=Escherichia coli O8 (strain IAI1) GN=ycaR
PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7NM57|YCAR_ECO7I UPF0434 protein YcaR OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B5YT51|YCAR_ECO5E UPF0434 protein YcaR OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|P0AAZ9|YCAR_ECO57 UPF0434 protein YcaR OS=Escherichia coli O157:H7 GN=ycaR PE=3
SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7LE15|YCAR_ECO55 UPF0434 protein YcaR OS=Escherichia coli (strain 55989 / EAEC)
GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7MHM6|YCAR_ECO45 UPF0434 protein YcaR OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|B7UN03|YCAR_ECO27 UPF0434 protein YcaR OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|A7ZK06|YCAR_ECO24 UPF0434 protein YcaR OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=ycaR PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E LI ++FP++DGIP L+ + ++L D+ +
Sbjct: 22 QEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESK 59
>sp|A8GCI2|Y1718_SERP5 UPF0434 protein Spro_1718 OS=Serratia proteamaculans (strain 568)
GN=Spro_1718 PE=3 SV=1
Length = 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 3 EETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40
+E L+ G+++P++DGIP L+ + + L +D+
Sbjct: 22 KENQELVCKVDGLAYPLRDGIPVLLENEARALSLDEKH 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.133 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,640,187
Number of Sequences: 539616
Number of extensions: 597320
Number of successful extensions: 1498
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 117
length of query: 53
length of database: 191,569,459
effective HSP length: 26
effective length of query: 27
effective length of database: 177,539,443
effective search space: 4793564961
effective search space used: 4793564961
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)