Query 036116
Match_columns 53
No_of_seqs 124 out of 804
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 16:14:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036116.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036116hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2js4_A UPF0434 protein BB2007; 99.7 1.1E-17 3.8E-22 95.9 3.2 41 2-42 21-61 (70)
2 2jny_A Uncharacterized BCR; st 99.7 1.3E-17 4.4E-22 95.1 3.4 39 2-40 23-61 (67)
3 2hf1_A Tetraacyldisaccharide-1 99.7 8.7E-18 3E-22 95.9 1.2 40 2-41 21-60 (68)
4 2jr6_A UPF0434 protein NMA0874 99.7 1E-17 3.5E-22 95.6 1.4 39 2-40 21-59 (68)
5 2pk7_A Uncharacterized protein 99.6 3.1E-17 1E-21 93.9 1.6 38 2-39 21-58 (69)
6 2kpi_A Uncharacterized protein 99.5 5.4E-15 1.9E-19 81.5 3.2 31 5-35 24-56 (56)
7 2k5r_A Uncharacterized protein 99.5 2.6E-15 8.9E-20 90.8 1.9 33 4-36 50-82 (97)
8 2j6a_A Protein TRM112; transla 99.5 1.3E-14 4.5E-19 92.4 1.6 32 2-33 104-135 (141)
9 3q87_A Putative uncharacterize 99.1 1.4E-11 4.9E-16 77.1 1.4 27 3-29 95-121 (125)
10 1pft_A TFIIB, PFTFIIBN; N-term 96.3 0.0014 4.7E-08 33.8 1.1 19 1-19 18-36 (50)
11 1dl6_A Transcription factor II 91.5 0.083 2.9E-06 28.3 1.5 17 2-18 25-41 (58)
12 2i5o_A DNA polymerase ETA; zin 84.0 0.64 2.2E-05 23.4 1.9 16 5-20 7-22 (39)
13 2jrr_A Uncharacterized protein 82.3 1.3 4.6E-05 24.6 3.0 24 4-27 37-60 (67)
14 2m0f_A Zinc finger and BTB dom 76.0 1.4 4.9E-05 17.5 1.4 13 7-19 2-14 (29)
15 2jz8_A Uncharacterized protein 74.6 1.9 6.6E-05 25.2 2.1 23 4-26 45-67 (87)
16 2m0d_A Zinc finger and BTB dom 73.8 1.9 6.7E-05 17.1 1.6 14 7-20 3-16 (30)
17 2jvm_A Uncharacterized protein 72.4 1.3 4.4E-05 25.6 1.0 22 4-25 50-71 (80)
18 2kvh_A Zinc finger and BTB dom 69.7 2.5 8.6E-05 16.8 1.4 13 7-19 3-15 (27)
19 2kvg_A Zinc finger and BTB dom 68.4 2.6 9E-05 16.9 1.4 14 7-20 3-16 (27)
20 1rik_A E6APC1 peptide; E6-bind 68.0 2.5 8.6E-05 16.8 1.2 14 8-21 3-16 (29)
21 1mzb_A Ferric uptake regulatio 67.8 2.6 8.9E-05 24.6 1.7 16 6-21 90-105 (136)
22 2e72_A POGO transposable eleme 67.1 1.4 4.8E-05 23.5 0.4 18 4-21 9-26 (49)
23 2elx_A Zinc finger protein 406 65.1 3.1 0.00011 17.4 1.3 14 6-19 6-19 (35)
24 3mwm_A ZUR, putative metal upt 64.9 3.2 0.00011 24.5 1.7 15 7-21 87-101 (139)
25 1ard_A Yeast transcription fac 64.4 2 6.7E-05 17.1 0.5 12 8-19 3-14 (29)
26 2kvf_A Zinc finger and BTB dom 63.9 3.8 0.00013 16.2 1.4 14 7-20 3-16 (28)
27 2fe3_A Peroxide operon regulat 63.7 3.3 0.00011 24.5 1.6 16 7-22 93-108 (145)
28 2elp_A Zinc finger protein 406 63.3 3.4 0.00012 17.7 1.2 14 6-19 8-21 (37)
29 2m0e_A Zinc finger and BTB dom 62.4 2.5 8.5E-05 16.6 0.6 13 8-20 3-15 (29)
30 2elt_A Zinc finger protein 406 62.4 3.6 0.00012 17.3 1.2 15 6-20 8-22 (36)
31 2xig_A Ferric uptake regulatio 62.2 3.8 0.00013 24.4 1.7 16 6-21 98-113 (150)
32 2els_A Zinc finger protein 406 61.9 4.6 0.00016 17.1 1.6 15 6-20 8-22 (36)
33 3eyy_A Putative iron uptake re 61.9 3.4 0.00012 24.5 1.4 16 6-21 89-104 (145)
34 4ets_A Ferric uptake regulatio 61.6 3.9 0.00013 24.8 1.7 16 6-21 106-121 (162)
35 2w57_A Ferric uptake regulatio 61.2 4.1 0.00014 24.3 1.7 16 6-21 89-104 (150)
36 1srk_A Zinc finger protein ZFP 61.0 4.7 0.00016 16.9 1.5 15 6-20 6-20 (35)
37 1twf_L ABC10-alpha, DNA-direct 60.7 4.6 0.00016 22.3 1.7 20 6-25 27-46 (70)
38 1znf_A 31ST zinc finger from X 60.1 2.9 9.8E-05 16.4 0.6 13 8-20 2-14 (27)
39 1paa_A Yeast transcription fac 59.4 3.2 0.00011 16.6 0.7 14 8-21 3-16 (30)
40 2elq_A Zinc finger protein 406 59.3 4.4 0.00015 17.2 1.2 14 6-19 8-21 (36)
41 2elm_A Zinc finger protein 406 58.7 6 0.0002 17.1 1.7 15 6-20 8-22 (37)
42 2lvt_A Zinc finger and BTB dom 63.2 2 6.9E-05 17.3 0.0 15 8-22 3-17 (29)
43 2lvr_A Zinc finger and BTB dom 63.0 2.1 7E-05 17.2 0.0 16 7-22 3-18 (30)
44 2lvu_A Zinc finger and BTB dom 63.0 2.1 7E-05 16.9 0.0 15 8-22 3-17 (26)
45 2elo_A Zinc finger protein 406 58.1 4.1 0.00014 17.3 1.0 15 6-20 8-22 (37)
46 2elv_A Zinc finger protein 406 58.0 5.6 0.00019 16.8 1.5 15 6-20 8-22 (36)
47 3k1f_M Transcription initiatio 57.4 3.4 0.00012 27.3 0.9 16 2-17 37-52 (197)
48 1klr_A Zinc finger Y-chromosom 57.3 3.1 0.00011 16.4 0.5 13 8-20 3-15 (30)
49 2akl_A PHNA-like protein PA012 57.0 4.8 0.00017 25.3 1.5 15 4-18 41-55 (138)
50 1njq_A Superman protein; zinc- 56.8 6.1 0.00021 17.1 1.5 15 6-20 5-19 (39)
51 3iuf_A Zinc finger protein UBI 56.1 5.5 0.00019 18.6 1.4 17 6-22 6-22 (48)
52 4bbr_M Transcription initiatio 56.0 4 0.00014 27.8 1.1 15 2-16 37-51 (345)
53 1p7a_A BF3, BKLF, kruppel-like 55.7 3.9 0.00013 17.4 0.7 15 6-20 10-24 (37)
54 2l9z_A PR domain zinc finger p 54.6 4.5 0.00015 20.6 0.9 25 6-30 10-37 (39)
55 2o03_A Probable zinc uptake re 53.6 6.6 0.00023 22.6 1.7 16 6-21 82-97 (131)
56 3k7a_M Transcription initiatio 53.5 4.1 0.00014 27.5 0.8 16 2-17 37-52 (345)
57 2elr_A Zinc finger protein 406 53.5 4.3 0.00015 17.1 0.7 14 6-19 8-21 (36)
58 1weo_A Cellulose synthase, cat 53.3 4.3 0.00015 24.1 0.8 26 2-27 53-78 (93)
59 2epv_A Zinc finger protein 268 53.1 6.4 0.00022 17.6 1.3 16 6-21 11-26 (44)
60 1vq8_Z 50S ribosomal protein L 52.4 5 0.00017 22.8 1.0 15 3-17 41-55 (83)
61 2epc_A Zinc finger protein 32; 52.3 7.9 0.00027 16.8 1.5 15 6-20 10-24 (42)
62 2yts_A Zinc finger protein 484 51.7 6.9 0.00024 17.4 1.3 16 6-21 11-26 (46)
63 2el5_A Zinc finger protein 268 51.7 7.6 0.00026 16.9 1.4 16 6-21 9-24 (42)
64 3j20_Y 30S ribosomal protein S 51.0 8.9 0.0003 19.7 1.8 13 5-17 35-47 (50)
65 2emi_A Zinc finger protein 484 50.7 8.4 0.00029 17.2 1.5 15 6-20 11-25 (46)
66 1g25_A CDK-activating kinase a 50.3 5.1 0.00018 20.1 0.7 23 6-28 42-64 (65)
67 2eof_A Zinc finger protein 268 50.2 8.7 0.0003 16.8 1.5 16 6-21 11-26 (44)
68 2eox_A Zinc finger protein 473 49.9 9.1 0.00031 16.9 1.6 16 6-21 11-26 (44)
69 2en2_A B-cell lymphoma 6 prote 49.6 9.1 0.00031 16.6 1.5 15 6-20 10-24 (42)
70 2ept_A Zinc finger protein 32; 49.3 9.2 0.00031 16.6 1.5 15 6-20 9-23 (41)
71 1yui_A GAGA-factor; complex (D 49.3 9.3 0.00032 17.9 1.6 14 6-19 23-36 (54)
72 2emb_A Zinc finger protein 473 49.2 9.9 0.00034 16.8 1.6 15 6-20 11-25 (44)
73 2yu5_A Zinc finger protein 473 49.0 8.5 0.00029 17.0 1.4 16 6-21 11-26 (44)
74 2eoz_A Zinc finger protein 473 48.9 8.5 0.00029 17.3 1.4 15 6-20 11-25 (46)
75 2eow_A Zinc finger protein 347 48.9 9.6 0.00033 16.9 1.5 16 6-21 11-26 (46)
76 2em3_A Zinc finger protein 28 48.4 8.4 0.00029 17.2 1.3 15 6-20 11-25 (46)
77 2em4_A Zinc finger protein 28 48.1 9.5 0.00032 17.1 1.5 16 6-21 11-26 (46)
78 2yrj_A Zinc finger protein 473 48.0 9.8 0.00033 16.9 1.5 15 6-20 11-25 (46)
79 2en3_A ZFP-95, zinc finger pro 47.9 8.6 0.00029 17.2 1.3 15 6-20 11-25 (46)
80 3a43_A HYPD, hydrogenase nicke 47.9 8.5 0.00029 23.2 1.6 18 4-21 67-84 (139)
81 2eoy_A Zinc finger protein 473 47.7 10 0.00034 17.0 1.5 16 6-21 11-26 (46)
82 2eor_A Zinc finger protein 224 47.6 10 0.00034 16.9 1.5 15 6-20 11-25 (46)
83 2emj_A Zinc finger protein 28 47.2 9.4 0.00032 17.1 1.4 15 6-20 11-25 (46)
84 1fv5_A First zinc finger of U- 47.1 7.6 0.00026 18.1 1.0 14 6-19 7-20 (36)
85 2ep3_A Zinc finger protein 484 46.9 9.9 0.00034 16.9 1.4 16 6-21 11-26 (46)
86 1rim_A E6APC2 peptide; E6-bind 46.8 5.9 0.0002 16.8 0.6 13 8-20 3-15 (33)
87 2epu_A Zinc finger protein 32; 46.5 11 0.00038 16.7 1.6 16 6-21 11-26 (45)
88 2ytf_A Zinc finger protein 268 46.4 10 0.00035 16.8 1.4 16 6-21 11-26 (46)
89 2ytp_A Zinc finger protein 484 46.4 11 0.00036 16.9 1.5 16 6-21 11-26 (46)
90 2eoj_A Zinc finger protein 268 46.1 7.8 0.00027 17.1 0.9 16 6-21 11-26 (44)
91 2ab3_A ZNF29; zinc finger prot 46.0 11 0.00038 14.6 1.4 13 8-20 3-17 (29)
92 2ene_A Zinc finger protein 347 46.0 11 0.00037 16.8 1.5 16 6-21 11-26 (46)
93 2ytj_A Zinc finger protein 484 46.0 10 0.00036 16.9 1.4 16 6-21 11-26 (46)
94 2kfq_A FP1; protein, de novo p 45.9 4.2 0.00014 17.1 -0.0 14 8-21 3-16 (32)
95 1wii_A Hypothetical UPF0222 pr 45.8 7.9 0.00027 22.1 1.1 20 5-26 45-64 (85)
96 2kdx_A HYPA, hydrogenase/ureas 45.8 10 0.00034 21.9 1.6 17 5-21 71-87 (119)
97 2emy_A Zinc finger protein 268 45.5 11 0.00039 16.7 1.5 15 6-20 11-25 (46)
98 1vyx_A ORF K3, K3RING; zinc-bi 45.4 6 0.00021 20.5 0.5 15 6-20 46-60 (60)
99 2yto_A Zinc finger protein 484 45.4 11 0.00039 16.8 1.5 15 6-20 11-25 (46)
100 2ytg_A ZFP-95, zinc finger pro 45.4 12 0.00042 16.6 1.6 16 6-21 11-26 (46)
101 2eoo_A ZFP-95, zinc finger pro 45.1 11 0.00039 16.8 1.5 15 6-20 11-25 (46)
102 2en6_A Zinc finger protein 268 45.0 13 0.00044 16.5 1.7 15 6-20 11-25 (46)
103 2ema_A Zinc finger protein 347 45.0 12 0.0004 16.7 1.5 16 6-21 11-26 (46)
104 2ysp_A Zinc finger protein 224 44.9 12 0.00042 16.6 1.6 16 6-21 11-26 (46)
105 2emh_A Zinc finger protein 484 44.9 12 0.0004 16.7 1.5 16 6-21 11-26 (46)
106 2em2_A Zinc finger protein 28 44.8 11 0.00038 16.8 1.4 15 6-20 11-25 (46)
107 2eml_A Zinc finger protein 28 44.6 11 0.00038 16.7 1.4 16 6-21 11-26 (46)
108 2drp_A Protein (tramtrack DNA- 44.5 13 0.00046 17.7 1.8 15 6-20 9-23 (66)
109 1m3v_A FLIN4, fusion of the LI 44.3 5.4 0.00018 22.8 0.2 22 3-24 99-120 (122)
110 2emf_A Zinc finger protein 484 44.2 13 0.00045 16.6 1.6 16 6-21 11-26 (46)
111 2eq0_A Zinc finger protein 347 44.1 13 0.00044 16.5 1.6 16 6-21 11-26 (46)
112 2yso_A ZFP-95, zinc finger pro 44.0 13 0.00044 16.5 1.6 15 6-20 11-25 (46)
113 2epw_A Zinc finger protein 268 43.9 13 0.00043 16.5 1.5 16 6-21 11-26 (46)
114 2em7_A Zinc finger protein 224 43.8 12 0.0004 16.7 1.4 16 6-21 11-26 (46)
115 2emx_A Zinc finger protein 268 43.7 13 0.00044 16.3 1.6 16 6-21 9-24 (44)
116 2ct2_A Tripartite motif protei 43.4 12 0.00041 19.4 1.6 25 4-28 12-36 (88)
117 2em5_A ZFP-95, zinc finger pro 43.3 12 0.00042 16.7 1.4 16 6-21 11-26 (46)
118 2em9_A Zinc finger protein 224 43.3 13 0.00044 16.4 1.5 16 6-21 11-26 (46)
119 2eme_A Zinc finger protein 473 43.1 12 0.00042 16.5 1.4 15 6-20 11-25 (46)
120 2el4_A Zinc finger protein 268 43.1 11 0.00038 16.7 1.2 16 6-21 11-26 (46)
121 2en1_A Zinc finger protein 224 43.0 13 0.00044 16.5 1.5 16 6-21 11-26 (46)
122 2vpb_A Hpygo1, pygopus homolog 43.0 18 0.00062 19.2 2.3 15 4-18 21-36 (65)
123 2d8s_A Cellular modulator of i 43.0 8.1 0.00028 21.1 0.9 19 6-24 57-75 (80)
124 1vd4_A Transcription initiatio 42.9 14 0.00049 18.0 1.8 16 6-21 38-53 (62)
125 2em8_A Zinc finger protein 224 42.9 13 0.00045 16.5 1.5 15 6-20 11-25 (46)
126 2en8_A Zinc finger protein 224 42.6 13 0.00046 16.4 1.5 16 6-21 11-26 (46)
127 2eos_A B-cell lymphoma 6 prote 42.6 8.3 0.00028 16.9 0.7 16 6-21 10-25 (42)
128 1jov_A HI1317; hypothetical pr 42.4 6.8 0.00023 25.3 0.5 17 16-32 66-82 (270)
129 2yte_A Zinc finger protein 473 42.4 8.4 0.00029 16.7 0.7 15 6-20 9-23 (42)
130 2enc_A Zinc finger protein 224 42.3 14 0.00047 16.4 1.5 15 6-20 11-25 (46)
131 2ep2_A Zinc finger protein 484 42.2 13 0.00044 16.5 1.4 16 6-21 11-26 (46)
132 2ytb_A Zinc finger protein 32; 42.2 7.7 0.00026 16.9 0.6 15 6-20 10-24 (42)
133 2ytk_A Zinc finger protein 347 42.2 13 0.00045 16.5 1.4 15 6-20 11-25 (46)
134 2eou_A Zinc finger protein 473 41.9 7.6 0.00026 17.2 0.5 15 6-20 11-25 (44)
135 2xeu_A Ring finger protein 4; 41.9 6.2 0.00021 19.2 0.2 19 8-26 45-63 (64)
136 2epr_A POZ-, at HOOK-, and zin 41.7 15 0.00052 16.6 1.7 16 5-20 10-25 (48)
137 3mjh_B Early endosome antigen 41.7 13 0.00045 17.9 1.4 11 7-17 5-15 (34)
138 3flo_B DNA polymerase alpha ca 41.7 14 0.00049 23.9 2.0 17 7-24 22-38 (206)
139 2emg_A Zinc finger protein 484 41.6 8.7 0.0003 17.1 0.7 16 6-21 11-26 (46)
140 2ecv_A Tripartite motif-contai 41.5 12 0.00042 19.0 1.4 23 6-28 58-80 (85)
141 2emp_A Zinc finger protein 347 41.5 13 0.00046 16.4 1.4 15 6-20 11-25 (46)
142 2yu8_A Zinc finger protein 347 41.2 14 0.00047 16.4 1.4 16 6-21 11-26 (46)
143 3ng2_A RNF4, snurf, ring finge 41.2 12 0.00042 18.6 1.4 20 8-27 52-71 (71)
144 2ecw_A Tripartite motif-contai 41.0 12 0.0004 19.1 1.3 23 6-28 58-80 (85)
145 1gh9_A 8.3 kDa protein (gene M 40.6 14 0.00046 20.5 1.5 14 8-22 5-18 (71)
146 2eq3_A Zinc finger protein 347 40.5 11 0.00038 16.7 1.0 16 6-21 11-26 (46)
147 1v54_F VI, cytochrome C oxidas 40.4 14 0.00047 21.6 1.6 13 8-20 80-92 (98)
148 2el6_A Zinc finger protein 268 40.4 14 0.00047 16.5 1.4 16 6-21 11-26 (46)
149 2emm_A ZFP-95, zinc finger pro 40.3 14 0.00049 16.3 1.4 15 6-20 11-25 (46)
150 1we9_A PHD finger family prote 40.1 21 0.00072 18.2 2.2 16 5-20 20-35 (64)
151 2enh_A Zinc finger protein 28 39.7 9.4 0.00032 17.1 0.7 16 6-21 11-26 (46)
152 2en9_A Zinc finger protein 28 39.6 10 0.00036 16.9 0.8 15 6-20 11-25 (46)
153 2l8e_A Polyhomeotic-like prote 39.5 22 0.00075 18.3 2.2 16 5-20 16-31 (49)
154 2ep0_A Zinc finger protein 28 39.4 15 0.00052 16.3 1.4 16 6-21 11-26 (46)
155 2yt5_A Metal-response element- 39.4 18 0.00061 18.6 1.8 16 5-20 21-36 (66)
156 2jsp_A Transcriptional regulat 39.2 15 0.0005 21.3 1.6 16 4-19 18-33 (87)
157 2enf_A Zinc finger protein 347 39.1 9 0.00031 17.1 0.5 16 6-21 11-26 (46)
158 2eq1_A Zinc finger protein 347 39.0 8.9 0.0003 17.1 0.5 16 6-21 11-26 (46)
159 2eon_A ZFP-95, zinc finger pro 38.9 9.1 0.00031 17.2 0.5 16 6-21 11-26 (46)
160 1f2i_G Fusion of N-terminal 17 38.7 17 0.0006 17.6 1.7 15 6-20 48-62 (73)
161 1vzy_A 33 kDa chaperonin; chap 38.0 17 0.00057 24.4 1.9 14 7-20 265-278 (291)
162 3h0g_I DNA-directed RNA polyme 38.0 15 0.0005 21.4 1.5 16 7-22 26-41 (113)
163 2ytd_A Zinc finger protein 473 37.8 17 0.00057 16.1 1.4 15 6-20 11-25 (46)
164 2en7_A Zinc finger protein 268 37.8 10 0.00035 16.6 0.6 16 6-21 11-26 (44)
165 2odx_A Cytochrome C oxidase po 37.6 15 0.00052 20.6 1.5 13 8-20 57-69 (80)
166 1bbo_A Human enhancer-binding 37.5 15 0.00051 16.9 1.2 15 6-20 28-42 (57)
167 2eov_A Zinc finger protein 484 37.2 10 0.00034 16.8 0.5 15 6-20 11-25 (46)
168 3uk3_C Zinc finger protein 217 36.8 18 0.0006 16.6 1.4 15 6-20 31-45 (57)
169 2adr_A ADR1; transcription reg 36.7 17 0.00057 16.9 1.4 16 6-21 29-44 (60)
170 2lv2_A Insulinoma-associated p 36.7 13 0.00046 20.1 1.1 14 7-20 28-41 (85)
171 2eq2_A Zinc finger protein 347 36.6 11 0.00037 16.8 0.6 16 6-21 11-26 (46)
172 3kqi_A GRC5, PHD finger protei 36.5 25 0.00087 18.7 2.2 16 4-19 22-37 (75)
173 2yti_A Zinc finger protein 347 36.2 11 0.00037 16.8 0.6 16 6-21 11-26 (46)
174 1f62_A Transcription factor WS 36.1 23 0.0008 17.3 1.9 16 5-20 13-28 (51)
175 2xb1_A Pygopus homolog 2, B-ce 36.0 25 0.00084 20.1 2.2 17 4-20 16-33 (105)
176 2elz_A Zinc finger protein 224 35.9 12 0.0004 16.7 0.7 16 6-21 11-26 (46)
177 2yth_A Zinc finger protein 224 35.9 11 0.00037 16.8 0.6 16 6-21 11-26 (46)
178 2eoe_A Zinc finger protein 347 35.8 13 0.00044 16.5 0.8 16 6-21 11-26 (46)
179 1v87_A Deltex protein 2; ring- 35.7 13 0.00044 20.5 0.9 18 5-22 80-97 (114)
180 2lcq_A Putative toxin VAPC6; P 35.7 14 0.00048 22.1 1.2 14 7-20 132-145 (165)
181 1k81_A EIF-2-beta, probable tr 35.5 16 0.00054 17.5 1.2 14 7-20 21-34 (36)
182 2ep1_A Zinc finger protein 484 35.4 11 0.00038 16.7 0.6 16 6-21 11-26 (46)
183 1vq0_A 33 kDa chaperonin; TM13 35.2 19 0.00064 24.5 1.8 15 6-20 271-285 (302)
184 2em6_A Zinc finger protein 224 35.2 12 0.0004 16.7 0.6 15 6-20 11-25 (46)
185 2l6l_A DNAJ homolog subfamily 34.8 20 0.0007 21.2 1.8 15 6-20 132-146 (155)
186 2eoh_A Zinc finger protein 28 34.7 10 0.00036 16.9 0.4 15 6-20 11-25 (46)
187 3na7_A HP0958; flagellar bioge 34.4 17 0.00059 23.4 1.5 13 5-17 220-232 (256)
188 2ytn_A Zinc finger protein 347 34.2 13 0.00044 16.5 0.7 16 6-21 11-26 (46)
189 1x5w_A Zinc finger protein 64, 34.1 19 0.00065 17.4 1.4 15 6-20 8-22 (70)
190 2eps_A POZ-, at HOOK-, and zin 34.0 23 0.00078 16.5 1.6 16 6-21 11-26 (54)
191 2eop_A Zinc finger protein 268 34.0 13 0.00043 16.5 0.6 16 6-21 11-26 (46)
192 2d9h_A Zinc finger protein 692 34.0 20 0.0007 17.6 1.5 13 8-20 39-51 (78)
193 2ely_A Zinc finger protein 224 33.9 11 0.00038 16.8 0.4 16 6-21 11-26 (46)
194 2yt9_A Zinc finger-containing 33.9 20 0.00069 18.1 1.5 14 6-19 6-19 (95)
195 1x6e_A Zinc finger protein 24; 33.9 21 0.00071 17.5 1.5 15 6-20 13-27 (72)
196 2emz_A ZFP-95, zinc finger pro 33.8 12 0.00042 16.6 0.6 15 6-20 11-25 (46)
197 1wep_A PHF8; structural genomi 33.5 32 0.0011 18.4 2.3 15 5-19 25-39 (79)
198 2eom_A ZFP-95, zinc finger pro 33.4 11 0.00039 16.9 0.4 15 6-20 11-25 (46)
199 2ct1_A Transcriptional repress 33.3 23 0.00077 17.5 1.6 13 7-19 15-27 (77)
200 2eq4_A Zinc finger protein 224 33.3 13 0.00045 16.4 0.6 15 6-20 11-25 (46)
201 2yrm_A B-cell lymphoma 6 prote 33.1 13 0.00046 16.4 0.6 15 6-20 9-23 (43)
202 2kgg_A Histone demethylase jar 33.0 33 0.0011 17.0 2.2 17 4-20 15-32 (52)
203 2emk_A Zinc finger protein 28 33.0 14 0.00048 16.5 0.7 15 6-20 11-25 (46)
204 2ku3_A Bromodomain-containing 33.0 28 0.00096 18.7 2.0 21 4-24 30-51 (71)
205 1zr9_A Zinc finger protein 593 32.9 12 0.00042 22.6 0.6 14 5-18 48-61 (124)
206 1sp2_A SP1F2; zinc finger, tra 32.9 13 0.00045 14.9 0.6 13 8-20 3-17 (31)
207 4gzn_C ZFP-57, zinc finger pro 32.8 20 0.00069 18.1 1.4 13 7-19 32-44 (60)
208 2y69_F Cytochrome C oxidase su 32.6 18 0.00063 22.2 1.4 13 8-20 111-123 (129)
209 2epz_A Zinc finger protein 28 32.6 14 0.00046 16.4 0.6 16 6-21 11-26 (46)
210 2lce_A B-cell lymphoma 6 prote 32.0 21 0.00074 17.4 1.4 14 7-20 45-58 (74)
211 2epx_A Zinc finger protein 28 31.5 14 0.00047 16.4 0.5 16 6-21 11-26 (47)
212 2ytr_A Zinc finger protein 347 31.4 15 0.00052 16.2 0.6 16 6-21 11-26 (46)
213 2egp_A Tripartite motif-contai 31.3 17 0.00058 18.5 0.9 22 6-27 52-73 (79)
214 2eoq_A Zinc finger protein 224 31.3 13 0.00044 16.5 0.4 15 6-20 11-25 (46)
215 2epq_A POZ-, at HOOK-, and zin 31.2 17 0.00058 16.1 0.8 15 6-20 9-23 (45)
216 1wev_A Riken cDNA 1110020M19; 31.0 28 0.00096 19.2 1.9 16 5-20 31-46 (88)
217 1s5p_A NAD-dependent deacetyla 30.8 28 0.00097 22.1 2.1 17 7-23 113-129 (235)
218 2ytq_A Zinc finger protein 268 30.4 16 0.00055 16.2 0.6 16 6-21 11-26 (46)
219 1qf8_A Casein kinase II; casei 30.3 23 0.00078 22.7 1.6 16 5-20 132-147 (182)
220 2kmk_A Zinc finger protein GFI 30.3 26 0.00089 17.0 1.5 12 7-18 57-68 (82)
221 2elu_A Zinc finger protein 406 30.0 21 0.00071 17.7 1.0 11 8-18 10-20 (37)
222 2ri7_A Nucleosome-remodeling f 29.9 34 0.0012 20.4 2.2 16 5-20 21-36 (174)
223 2ytm_A Zinc finger protein 28 29.8 17 0.0006 16.2 0.7 15 6-20 11-25 (46)
224 3dqy_A Toluene 1,2-dioxygenase 29.7 32 0.0011 18.7 1.9 25 5-29 56-80 (106)
225 2em0_A Zinc finger protein 224 29.5 15 0.00051 16.3 0.4 15 6-20 11-25 (46)
226 1twf_I B12.6, DNA-directed RNA 29.1 25 0.00085 20.6 1.5 18 5-22 24-41 (122)
227 2nn6_I 3'-5' exoribonuclease C 28.9 25 0.00086 22.3 1.6 13 5-17 183-195 (209)
228 1p91_A Ribosomal RNA large sub 28.4 77 0.0026 19.1 3.7 26 6-31 17-42 (269)
229 3ga8_A HTH-type transcriptiona 28.1 25 0.00086 18.7 1.3 11 7-17 36-46 (78)
230 2ctd_A Zinc finger protein 512 27.9 26 0.0009 18.7 1.4 12 6-17 33-44 (96)
231 2ytt_A Zinc finger protein 473 27.7 18 0.00062 16.0 0.6 15 6-20 11-25 (46)
232 3gce_A Ferredoxin component of 27.5 30 0.001 19.6 1.6 26 4-29 66-91 (121)
233 1a1h_A QGSR zinc finger peptid 27.4 32 0.0011 17.0 1.6 13 7-19 62-74 (90)
234 6rxn_A Rubredoxin; electron tr 27.4 28 0.00095 17.6 1.3 18 7-24 4-21 (46)
235 1zfd_A SWI5; DNA binding motif 27.0 22 0.00075 14.2 0.8 13 8-20 4-18 (32)
236 2lv9_A Histone-lysine N-methyl 26.8 44 0.0015 18.7 2.2 20 5-24 40-60 (98)
237 2cot_A Zinc finger protein 435 26.7 29 0.00098 17.1 1.3 16 6-21 45-60 (77)
238 4g9i_A Hydrogenase maturation 26.6 20 0.00068 27.2 0.9 18 8-25 129-146 (772)
239 2ctu_A Zinc finger protein 483 26.5 53 0.0018 15.4 2.3 19 6-24 17-35 (73)
240 1x6h_A Transcriptional repress 26.4 32 0.0011 16.9 1.4 13 7-19 15-27 (86)
241 2gqj_A Zinc finger protein KIA 26.2 19 0.00065 19.0 0.5 12 7-18 24-35 (98)
242 2ct7_A Ring finger protein 31; 26.2 30 0.001 18.8 1.4 17 7-23 43-59 (86)
243 2k16_A Transcription initiatio 25.7 35 0.0012 17.8 1.6 19 6-24 32-51 (75)
244 2epp_A POZ-, at HOOK-, and zin 25.5 21 0.00072 18.7 0.6 16 6-21 12-27 (66)
245 4dgl_A Casein kinase II subuni 25.5 31 0.0011 22.8 1.6 16 6-21 133-148 (215)
246 3pwf_A Rubrerythrin; non heme 25.2 53 0.0018 20.2 2.5 13 6-18 137-149 (170)
247 3rsn_A SET1/ASH2 histone methy 25.1 32 0.0011 22.0 1.6 15 6-20 19-33 (177)
248 2qpz_A Naphthalene 1,2-dioxyge 24.8 43 0.0015 18.0 1.9 26 4-29 57-82 (103)
249 1qyp_A RNA polymerase II; tran 24.8 37 0.0013 17.1 1.5 11 8-18 44-54 (57)
250 2dkt_A Ring finger and CHY zin 24.8 33 0.0011 21.3 1.5 13 7-19 27-39 (143)
251 2v3b_B Rubredoxin 2, rubredoxi 24.5 47 0.0016 17.2 1.9 18 7-24 3-20 (55)
252 2w0t_A Lethal(3)malignant brai 24.5 51 0.0017 16.7 2.0 13 4-16 3-15 (43)
253 1j2o_A FLIN2, fusion of rhombo 24.4 11 0.00039 21.1 -0.6 20 4-23 92-111 (114)
254 3ttc_A HYPF, transcriptional r 24.3 20 0.00067 26.9 0.5 18 8-25 40-57 (657)
255 2dmd_A Zinc finger protein 64, 24.3 36 0.0012 17.1 1.4 15 6-20 63-77 (96)
256 1va1_A Transcription factor SP 24.2 46 0.0016 13.9 1.6 14 6-19 7-22 (37)
257 1bhi_A CRE-BP1, ATF-2; CRE bin 24.2 46 0.0016 13.8 1.6 15 6-20 5-21 (38)
258 2csh_A Zinc finger protein 297 24.0 37 0.0013 17.6 1.5 16 6-21 64-79 (110)
259 1i7f_A Heat shock protein 33; 23.8 17 0.00057 24.5 0.0 14 7-20 260-273 (292)
260 2k4x_A 30S ribosomal protein S 23.6 44 0.0015 17.3 1.7 12 6-17 35-46 (55)
261 1llm_C Chimera of ZIF23-GCN4; 23.6 41 0.0014 16.9 1.6 11 8-18 4-14 (88)
262 2eod_A TNF receptor-associated 23.5 50 0.0017 15.8 1.8 12 7-18 10-21 (66)
263 1wee_A PHD finger family prote 23.4 59 0.002 17.0 2.2 15 6-20 30-44 (72)
264 3vhs_A ATPase wrnip1; zinc fin 23.1 52 0.0018 15.4 1.7 13 7-19 6-18 (29)
265 1lv3_A Hypothetical protein YA 22.9 45 0.0015 18.4 1.7 15 6-20 8-22 (68)
266 2puy_A PHD finger protein 21A; 22.8 42 0.0014 17.0 1.5 16 5-20 15-30 (60)
267 3vth_A Hydrogenase maturation 22.8 22 0.00075 27.0 0.5 18 8-25 134-151 (761)
268 1t1h_A Gspef-atpub14, armadill 22.7 33 0.0011 17.4 1.1 22 6-27 42-63 (78)
269 2lri_C Autoimmune regulator; Z 22.6 37 0.0013 17.9 1.3 16 5-20 22-37 (66)
270 3h0g_L DNA-directed RNA polyme 22.4 30 0.001 18.7 0.9 14 8-21 22-35 (63)
271 1yk4_A Rubredoxin, RD; electro 22.4 52 0.0018 16.8 1.8 19 7-25 2-20 (52)
272 3m7n_A Putative uncharacterize 22.2 36 0.0012 20.9 1.4 13 5-17 154-166 (179)
273 4ap4_A E3 ubiquitin ligase RNF 22.2 24 0.00081 19.3 0.4 20 8-27 114-133 (133)
274 2djb_A Polycomb group ring fin 22.0 34 0.0012 17.2 1.0 17 8-24 51-67 (72)
275 2kn9_A Rubredoxin; metalloprot 21.9 59 0.002 18.3 2.1 19 6-24 26-44 (81)
276 1x4s_A Protein FON, zinc finge 21.7 37 0.0013 18.3 1.1 12 6-17 25-36 (59)
277 1dx8_A Rubredoxin; electron tr 21.6 64 0.0022 17.5 2.2 20 5-24 5-24 (70)
278 1pvm_A Conserved hypothetical 21.6 17 0.00058 21.1 -0.3 11 4-14 166-176 (184)
279 2l5u_A Chromodomain-helicase-D 21.6 51 0.0017 16.9 1.7 16 5-20 21-36 (61)
280 3qt1_I DNA-directed RNA polyme 21.4 27 0.00092 21.1 0.6 17 7-23 46-62 (133)
281 1ma3_A SIR2-AF2, transcription 21.4 42 0.0014 21.6 1.6 15 7-21 123-137 (253)
282 3u31_A SIR2A, transcriptional 21.4 45 0.0015 22.3 1.8 15 7-21 154-168 (290)
283 1wvk_A AT2G23090/F21P24.15; st 21.4 43 0.0015 19.2 1.5 21 6-26 44-64 (86)
284 2dlq_A GLI-kruppel family memb 21.2 48 0.0016 17.3 1.6 14 6-19 65-78 (124)
285 2i7f_A Ferredoxin component of 21.2 55 0.0019 17.8 1.9 25 5-29 59-83 (108)
286 1ncs_A Peptide M30F, transcrip 21.1 61 0.0021 14.4 1.8 16 6-21 17-34 (47)
287 1ci3_M Protein (cytochrome F); 20.8 20 0.00068 24.4 -0.1 24 3-26 14-38 (249)
288 2yql_A PHD finger protein 21A; 20.7 43 0.0015 16.7 1.2 16 5-20 19-34 (56)
289 1hcz_A Cytochrome F; electron 20.7 20 0.00069 24.5 -0.1 24 3-26 14-38 (252)
290 1xwh_A Autoimmune regulator; P 20.6 45 0.0015 17.3 1.3 16 5-20 18-33 (66)
291 1e2w_A Cytochrome F; electron 20.5 20 0.0007 24.4 -0.1 24 3-26 14-38 (251)
292 2x3l_A ORN/Lys/Arg decarboxyla 20.2 31 0.0011 23.1 0.8 13 20-32 403-415 (446)
293 3nw0_A Non-structural maintena 20.2 35 0.0012 22.1 1.0 21 5-27 215-235 (238)
294 2ee8_A Protein ODD-skipped-rel 20.1 34 0.0012 17.6 0.8 12 7-18 17-28 (106)
295 2de6_D Ferredoxin component of 20.1 62 0.0021 18.0 1.9 25 5-29 60-84 (115)
No 1
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=99.69 E-value=1.1e-17 Score=95.89 Aligned_cols=41 Identities=17% Similarity=0.473 Sum_probs=36.3
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCccCCCCccccC
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQIK 42 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~~e~~~~ 42 (53)
+..+|+|+|+.|+++|||+|||||||+++++.++.++..+.
T Consensus 21 ~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear~~~~~e~~~~ 61 (70)
T 2js4_A 21 QRAQAELVCNADRLAFPVRDGVPIMLEAEARSLDAEAPAQP 61 (70)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCGGGSEESSSCCCCCC
T ss_pred eCCCCEEEcCCCCceecCCCCeeeeChhhcccCCchhhhhh
Confidence 45679999999999999999999999999999998775543
No 2
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=99.69 E-value=1.3e-17 Score=95.14 Aligned_cols=39 Identities=21% Similarity=0.435 Sum_probs=35.6
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCccCCCCccc
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~~e~~ 40 (53)
+..+|+|+|+.|+++|||+|||||||+++++.++..+.+
T Consensus 23 ~~~~g~LvC~~c~~~YPI~dGIPvmL~~Ear~~~~~~~~ 61 (67)
T 2jny_A 23 LESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE 61 (67)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCSSCCEECCCCCCC
T ss_pred eCCCCEEEcCCCCccccCCCCEeeeChhHhcCCchhhhh
Confidence 456899999999999999999999999999999987764
No 3
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=99.67 E-value=8.7e-18 Score=95.90 Aligned_cols=40 Identities=28% Similarity=0.548 Sum_probs=35.4
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCccCCCCcccc
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQI 41 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~~e~~~ 41 (53)
+..+|+|+|+.|+++|||+|||||||+++++.++.++..+
T Consensus 21 ~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear~~~~~e~~~ 60 (68)
T 2hf1_A 21 DKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVK 60 (68)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCGGGCEECCHHHHGG
T ss_pred eCCCCEEEcCCCCcEecCCCCeeeeChhhccCcCchhhhh
Confidence 4567999999999999999999999999999998766543
No 4
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=99.67 E-value=1e-17 Score=95.61 Aligned_cols=39 Identities=26% Similarity=0.547 Sum_probs=34.8
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCccCCCCccc
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDDQ 40 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~~e~~ 40 (53)
+..+|+|+|+.|+++|||+|||||||+++++.++.++..
T Consensus 21 ~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear~~~~~e~~ 59 (68)
T 2jr6_A 21 HQDKQELWSRQAKLAYPIKDGIPYMLENEARPLSEEELK 59 (68)
T ss_dssp ETTTTEEEETTTTEEEEEETTEECCCTTTCEECCHHHHH
T ss_pred eCCCCEEEcCCCCcEecCCCCeeeeChhhccCcCcchhh
Confidence 456799999999999999999999999999999876653
No 5
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=99.64 E-value=3.1e-17 Score=93.85 Aligned_cols=38 Identities=29% Similarity=0.721 Sum_probs=34.3
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCccCCCCcc
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKILGVDDD 39 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~~e~ 39 (53)
+..+++|+|+.|+++|||+|||||||+++++.++.++.
T Consensus 21 ~~~~~~LiC~~cg~~YPI~dGIPvmL~~ear~~~~~~~ 58 (69)
T 2pk7_A 21 SADKTELISKGAGLAYPIRDGIPVMLESEARTLTTEER 58 (69)
T ss_dssp CTTSSEEEETTTTEEEEEETTEECCCGGGCEECCHHHH
T ss_pred eCCCCEEEcCCCCcEecCcCCeeeeChhhccccCcccc
Confidence 45679999999999999999999999999999987554
No 6
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=99.52 E-value=5.4e-15 Score=81.47 Aligned_cols=31 Identities=29% Similarity=0.669 Sum_probs=28.8
Q ss_pred CCeEEcC--CCCeeeeeeCCccccCCCCCccCC
Q 036116 5 TNSLISD--SIGVSFPIKDGIPSLVPKDGKILG 35 (53)
Q Consensus 5 ~g~LiC~--~c~~~YPI~dGIPvLL~~ear~l~ 35 (53)
+|+|+|+ .|+++|||+|||||||+++||.++
T Consensus 24 ~~~L~C~~~~c~~~YPI~dGIPvlL~~ear~~~ 56 (56)
T 2kpi_A 24 DAELICTGQDCGLAYPVRDGIPVLLVDEARRPE 56 (56)
T ss_dssp TTEEEECSSSCCCEEEEETTEECCCTTTCBCCC
T ss_pred CCEEEcCCcCCCcEEeeECCEeeeCHHHcccCC
Confidence 3899999 999999999999999999999864
No 7
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=99.52 E-value=2.6e-15 Score=90.80 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=30.7
Q ss_pred cCCeEEcCCCCeeeeeeCCccccCCCCCccCCC
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSLVPKDGKILGV 36 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvLL~~ear~l~~ 36 (53)
.+|+|+|+.|+++|||+|||||||+++++.++.
T Consensus 50 ~~~~LvC~~c~~~YPI~dGIPvmL~~ear~~~~ 82 (97)
T 2k5r_A 50 LHEALITRDRKQVFRIEDSIPVLLPEEAIATIQ 82 (97)
T ss_dssp CSEEEECTTSCEEEEEETTEEECCGGGEEEGGG
T ss_pred cCCeEEcCCCCCCccccCCCcccChHHhccccc
Confidence 368999999999999999999999999998875
No 8
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.3e-14 Score=92.38 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.7
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccCCCCCcc
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLVPKDGKI 33 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL~~ear~ 33 (53)
++.+|.|+|+.||++|||+||||+||++++|.
T Consensus 104 ~v~eg~L~C~~cg~~YPI~dGIP~mL~~ear~ 135 (141)
T 2j6a_A 104 SIAEGEMKCRNCGHIYYIKNGIPNLLLPPHLV 135 (141)
T ss_dssp EEEEEEEECTTTCCEEEEETTEESSCCCSSCC
T ss_pred eccCCEEECCCCCCcccccCCccCcCCcHHHh
Confidence 45789999999999999999999999999985
No 9
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.11 E-value=1.4e-11 Score=77.07 Aligned_cols=27 Identities=33% Similarity=0.415 Sum_probs=24.7
Q ss_pred ccCCeEEcCCCCeeeeeeCCccccCCC
Q 036116 3 EETNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 3 ~~~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
..+|.|+|+.||+.|||++|||+|+..
T Consensus 95 V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 95 VVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEEECCCCCCEeeccCCcccHHHh
Confidence 468999999999999999999999864
No 10
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.25 E-value=0.0014 Score=33.85 Aligned_cols=19 Identities=11% Similarity=0.111 Sum_probs=15.9
Q ss_pred CcccCCeEEcCCCCeeeee
Q 036116 1 VCEETNSLISDSIGVSFPI 19 (53)
Q Consensus 1 ~~~~~g~LiC~~c~~~YPI 19 (53)
|+...|+|+|+.||+.|+-
T Consensus 18 ~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 18 YDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp EETTTTEEEESSSCCBCCC
T ss_pred EcCCCCeEECcccCCcccc
Confidence 4567799999999999974
No 11
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=91.51 E-value=0.083 Score=28.26 Aligned_cols=17 Identities=12% Similarity=0.143 Sum_probs=14.0
Q ss_pred cccCCeEEcCCCCeeee
Q 036116 2 CEETNSLISDSIGVSFP 18 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YP 18 (53)
+...|.++|..||+.+.
T Consensus 25 D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 25 DYRAGDMICPECGLVVG 41 (58)
T ss_dssp CSSSCCEECTTTCCEEC
T ss_pred eCCCCeEEeCCCCCEEe
Confidence 45679999999998873
No 12
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=84.00 E-value=0.64 Score=23.39 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=13.5
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...+.|++|+..+|+.
T Consensus 7 ~~~~~C~~C~~~i~~~ 22 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVW 22 (39)
T ss_dssp CCEEECTTTCCEEEGG
T ss_pred CCCcccccccCcCCcc
Confidence 4568899999999985
No 13
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=82.31 E-value=1.3 Score=24.63 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=19.7
Q ss_pred cCCeEEcCCCCeeeeeeCCccccC
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvLL 27 (53)
..+.-.|+-|++.|..+++-..-|
T Consensus 37 ~~g~~~CpYCg~~f~l~~~~~~~~ 60 (67)
T 2jrr_A 37 DTGWVECPYCDCKYVLKGSKADAL 60 (67)
T ss_dssp TTSEEEETTTTEEEEETTSGGGCC
T ss_pred CCCeEECCCCCCEEEECCCcchhh
Confidence 468999999999999888765544
No 14
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=75.99 E-value=1.4 Score=17.48 Aligned_cols=13 Identities=23% Similarity=0.330 Sum_probs=10.4
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...|+.|+..|.-
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2m0f_A 2 PLKCRECGKQFTT 14 (29)
T ss_dssp CEECTTTSCEESC
T ss_pred CccCCCCCCccCC
Confidence 4689999999863
No 15
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=74.60 E-value=1.9 Score=25.20 Aligned_cols=23 Identities=9% Similarity=0.056 Sum_probs=19.3
Q ss_pred cCCeEEcCCCCeeeeeeCCcccc
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSL 26 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvL 26 (53)
..|+-.|+-|++.|..+++.+-+
T Consensus 45 ~~g~~~CpYCg~~y~~~~~~~~~ 67 (87)
T 2jz8_A 45 STDEKICPYCSTLYRYDPSLSYN 67 (87)
T ss_dssp TCCEECCTTTCCEEECCTTSCTT
T ss_pred CCCeEECCCCCCEeEcCCCCCcC
Confidence 35899999999999999887643
No 16
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.79 E-value=1.9 Score=17.11 Aligned_cols=14 Identities=29% Similarity=0.242 Sum_probs=11.2
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
...|..|++.|.-.
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 46899999999743
No 17
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=72.44 E-value=1.3 Score=25.55 Aligned_cols=22 Identities=9% Similarity=-0.068 Sum_probs=18.1
Q ss_pred cCCeEEcCCCCeeeeeeCCccc
Q 036116 4 ETNSLISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPv 25 (53)
..+.-.|+-|+..|..+++...
T Consensus 50 ~~g~~~CpYCg~~f~l~~~~~~ 71 (80)
T 2jvm_A 50 ETGFVECGYCDRRYIHESFAAA 71 (80)
T ss_dssp TTCEEECSSSSCEEEEHHHHSC
T ss_pred CCCeEECCCCCCEEEecCCccc
Confidence 4689999999999988776543
No 18
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=69.74 E-value=2.5 Score=16.79 Aligned_cols=13 Identities=0% Similarity=-0.324 Sum_probs=10.6
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...|+.|++.|.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 3 PFSCSLCPQRSRD 15 (27)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCcChhhCC
Confidence 4689999999864
No 19
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=68.36 E-value=2.6 Score=16.94 Aligned_cols=14 Identities=7% Similarity=-0.078 Sum_probs=11.0
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
...|+.|++.|.-.
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 36899999998643
No 20
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=67.95 E-value=2.5 Score=16.82 Aligned_cols=14 Identities=14% Similarity=0.078 Sum_probs=10.9
Q ss_pred EEcCCCCeeeeeeC
Q 036116 8 LISDSIGVSFPIKD 21 (53)
Q Consensus 8 LiC~~c~~~YPI~d 21 (53)
..|+.|++.|.-..
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 3 FACPECPKRFMRSD 16 (29)
T ss_dssp EECSSSSCEESCSH
T ss_pred ccCCCCCchhCCHH
Confidence 57999999986543
No 21
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=67.80 E-value=2.6 Score=24.59 Aligned_cols=16 Identities=13% Similarity=0.283 Sum_probs=13.8
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-|+|..||+.+.|.+
T Consensus 90 ~HliC~~Cg~v~~~~~ 105 (136)
T 1mzb_A 90 DHMVCVDTGEVIEFMD 105 (136)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred eEEEECCCCCEEEecc
Confidence 3699999999999964
No 22
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.13 E-value=1.4 Score=23.47 Aligned_cols=18 Identities=11% Similarity=0.270 Sum_probs=14.6
Q ss_pred cCCeEEcCCCCeeeeeeC
Q 036116 4 ETNSLISDSIGVSFPIKD 21 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~d 21 (53)
..+...||.|++.|.+.+
T Consensus 9 ~~~~~~CPrCn~~f~~~~ 26 (49)
T 2e72_A 9 DGGRKICPRCNAQFRVTE 26 (49)
T ss_dssp CSSCCCCTTTCCCCSSHH
T ss_pred cCCceeCCcccccccchH
Confidence 347789999999998654
No 23
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=65.12 E-value=3.1 Score=17.37 Aligned_cols=14 Identities=7% Similarity=-0.035 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|++.|.-
T Consensus 6 k~~~C~~C~k~f~~ 19 (35)
T 2elx_A 6 SGYVCALCLKKFVS 19 (35)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCCCcchhCC
Confidence 45789999999864
No 24
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=64.88 E-value=3.2 Score=24.46 Aligned_cols=15 Identities=13% Similarity=0.372 Sum_probs=13.5
Q ss_pred eEEcCCCCeeeeeeC
Q 036116 7 SLISDSIGVSFPIKD 21 (53)
Q Consensus 7 ~LiC~~c~~~YPI~d 21 (53)
-|+|..||+.+.|.+
T Consensus 87 HliC~~Cg~v~~~~~ 101 (139)
T 3mwm_A 87 HLVCRACGKAVEVEG 101 (139)
T ss_dssp EEEETTTCCEEEECC
T ss_pred EEEECCCCCEeeccc
Confidence 599999999999965
No 25
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=64.42 E-value=2 Score=17.10 Aligned_cols=12 Identities=8% Similarity=0.243 Sum_probs=9.6
Q ss_pred EEcCCCCeeeee
Q 036116 8 LISDSIGVSFPI 19 (53)
Q Consensus 8 LiC~~c~~~YPI 19 (53)
..|+.|++.|.-
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 579999998864
No 26
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.92 E-value=3.8 Score=16.21 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=10.9
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
...|+.|++.|.-.
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 46799999998643
No 27
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=63.73 E-value=3.3 Score=24.46 Aligned_cols=16 Identities=13% Similarity=0.104 Sum_probs=13.9
Q ss_pred eEEcCCCCeeeeeeCC
Q 036116 7 SLISDSIGVSFPIKDG 22 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dG 22 (53)
-|+|..||+.+.|.+.
T Consensus 93 HliC~~Cg~v~~~~~~ 108 (145)
T 2fe3_A 93 HAICENCGKIVDFHYP 108 (145)
T ss_dssp EEEETTTCCEEECCCC
T ss_pred eEEECCCCCEEEecCC
Confidence 5999999999999653
No 28
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.26 E-value=3.4 Score=17.69 Aligned_cols=14 Identities=7% Similarity=-0.014 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|++.|.-
T Consensus 8 k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 8 RAMKCPYCDFYFMK 21 (37)
T ss_dssp CCEECSSSSCEECS
T ss_pred CCeECCCCChhhcc
Confidence 45899999999864
No 29
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=62.39 E-value=2.5 Score=16.61 Aligned_cols=13 Identities=8% Similarity=-0.123 Sum_probs=9.9
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
..|+.|+..|.-.
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 3 HKCPHCDKKFNQV 15 (29)
T ss_dssp CCCSSCCCCCCTT
T ss_pred CcCCCCCcccCCH
Confidence 4699999988643
No 30
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.36 E-value=3.6 Score=17.33 Aligned_cols=15 Identities=13% Similarity=0.062 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 8 KPYKCPQCSYASAIK 22 (36)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 458999999999654
No 31
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=62.23 E-value=3.8 Score=24.43 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=13.9
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-|+|..||+.+.|.+
T Consensus 98 ~HliC~~Cg~v~~~~~ 113 (150)
T 2xig_A 98 DHIICLHCGKIIEFAD 113 (150)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred eEEEECCCCCEEEecC
Confidence 4699999999999964
No 32
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.92 E-value=4.6 Score=17.09 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 8 KIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEECCCCCceeCCH
Confidence 457899999999643
No 33
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=61.90 E-value=3.4 Score=24.50 Aligned_cols=16 Identities=6% Similarity=-0.097 Sum_probs=13.9
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-|+|..||+.+.|.+
T Consensus 89 ~HliC~~Cg~v~~~~~ 104 (145)
T 3eyy_A 89 IHLVCRDCTNVIEADL 104 (145)
T ss_dssp EEEEESSSSCEEEECG
T ss_pred eEEEECCCCCEEEecC
Confidence 3699999999999964
No 34
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=61.59 E-value=3.9 Score=24.84 Aligned_cols=16 Identities=13% Similarity=0.360 Sum_probs=13.9
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
..|+|..||+.+.|.+
T Consensus 106 ~HliC~~CG~v~e~~~ 121 (162)
T 4ets_A 106 DHMICKNCGKIIEFEN 121 (162)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred cEEEECCCCCEEEecc
Confidence 3599999999999975
No 35
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=61.18 E-value=4.1 Score=24.29 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=13.8
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-|+|..||+.+.|.+
T Consensus 89 ~HliC~~Cg~v~~~~~ 104 (150)
T 2w57_A 89 DHLVCLDCGEVIEFSD 104 (150)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred eEEEECCCCCEEEecc
Confidence 3699999999999964
No 36
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=61.00 E-value=4.7 Score=16.87 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|..|++.|.-.
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 6 RPFVCRICLSAFTTK 20 (35)
T ss_dssp SCEECSSSCCEESSH
T ss_pred cCeeCCCCCcccCCH
Confidence 457899999998644
No 37
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=60.67 E-value=4.6 Score=22.27 Aligned_cols=20 Identities=5% Similarity=-0.016 Sum_probs=15.3
Q ss_pred CeEEcCCCCeeeeeeCCccc
Q 036116 6 NSLISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPv 25 (53)
-..+|..||..|.+.++=++
T Consensus 27 v~Y~C~~CG~~~e~~~~d~i 46 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAV 46 (70)
T ss_dssp CCEECSSSCCEECCCTTSTT
T ss_pred EEEECCCCCCcceeCCCCCc
Confidence 35689999999999866444
No 38
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=60.06 E-value=2.9 Score=16.39 Aligned_cols=13 Identities=23% Similarity=0.002 Sum_probs=9.8
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
..|..|++.|.-.
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 3689999988643
No 39
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=59.39 E-value=3.2 Score=16.62 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=10.6
Q ss_pred EEcCCCCeeeeeeC
Q 036116 8 LISDSIGVSFPIKD 21 (53)
Q Consensus 8 LiC~~c~~~YPI~d 21 (53)
..|+.|++.|.-..
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 3 YACGLCNRAFTRRD 16 (30)
T ss_dssp SBCTTTCCBCSSSH
T ss_pred cCCcccCcccCChH
Confidence 46999999986543
No 40
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.27 E-value=4.4 Score=17.17 Aligned_cols=14 Identities=0% Similarity=-0.168 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|++.|.-
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 8 KPFKCSLCEYATRS 21 (36)
T ss_dssp CSEECSSSSCEESC
T ss_pred CCccCCCCCchhCC
Confidence 45889999999864
No 41
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.65 E-value=6 Score=17.08 Aligned_cols=15 Identities=13% Similarity=-0.108 Sum_probs=11.8
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.=.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 8 HLYYCSQCHYSSITK 22 (37)
T ss_dssp CEEECSSSSCEEECH
T ss_pred cCeECCCCCcccCCH
Confidence 458899999999643
No 42
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=63.17 E-value=2 Score=17.27 Aligned_cols=15 Identities=13% Similarity=0.069 Sum_probs=11.4
Q ss_pred EEcCCCCeeeeeeCC
Q 036116 8 LISDSIGVSFPIKDG 22 (53)
Q Consensus 8 LiC~~c~~~YPI~dG 22 (53)
..|+.|++.|.-...
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 3 CQCVMCGKAFTQASS 17 (29)
Confidence 579999999875543
No 43
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=63.01 E-value=2.1 Score=17.18 Aligned_cols=16 Identities=6% Similarity=-0.014 Sum_probs=11.9
Q ss_pred eEEcCCCCeeeeeeCC
Q 036116 7 SLISDSIGVSFPIKDG 22 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dG 22 (53)
...|+.|++.|.-...
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGA 18 (30)
Confidence 3679999999875443
No 44
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.98 E-value=2.1 Score=16.93 Aligned_cols=15 Identities=13% Similarity=0.273 Sum_probs=11.4
Q ss_pred EEcCCCCeeeeeeCC
Q 036116 8 LISDSIGVSFPIKDG 22 (53)
Q Consensus 8 LiC~~c~~~YPI~dG 22 (53)
..|+.|++.|.-...
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQ 17 (26)
Confidence 469999999876543
No 45
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.09 E-value=4.1 Score=17.31 Aligned_cols=15 Identities=20% Similarity=0.067 Sum_probs=11.7
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 8 RSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCEETTTTEECSSH
T ss_pred CCcCCCCCCCccCCH
Confidence 357899999998643
No 46
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.97 E-value=5.6 Score=16.79 Aligned_cols=15 Identities=7% Similarity=-0.201 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 8 LLYDCHICERKFKNE 22 (36)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 457899999998644
No 47
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=57.40 E-value=3.4 Score=27.34 Aligned_cols=16 Identities=6% Similarity=0.123 Sum_probs=12.9
Q ss_pred cccCCeEEcCCCCeee
Q 036116 2 CEETNSLISDSIGVSF 17 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~Y 17 (53)
|..+|+++|..||+..
T Consensus 37 D~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 37 RFSEGDVVCALCGLVL 52 (197)
T ss_dssp EGGGTEEEETTTCBBC
T ss_pred eCCCCEEEEcCCCCCc
Confidence 3468999999999753
No 48
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=57.32 E-value=3.1 Score=16.42 Aligned_cols=13 Identities=0% Similarity=-0.279 Sum_probs=9.9
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
..|+.|++.|.-.
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 4699999988643
No 49
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=56.97 E-value=4.8 Score=25.32 Aligned_cols=15 Identities=7% Similarity=0.169 Sum_probs=12.6
Q ss_pred cCCeEEcCCCCeeee
Q 036116 4 ETNSLISDSIGVSFP 18 (53)
Q Consensus 4 ~~g~LiC~~c~~~YP 18 (53)
+...|+||.|+..|.
T Consensus 41 Dg~l~vCPeC~hEW~ 55 (138)
T 2akl_A 41 DGALLVCPECAHEWS 55 (138)
T ss_dssp CSSSEEETTTTEEEC
T ss_pred cCCeEECCccccccC
Confidence 456799999999995
No 50
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=56.81 E-value=6.1 Score=17.12 Aligned_cols=15 Identities=13% Similarity=-0.006 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|..|++.|.-.
T Consensus 5 k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 5 RSYTCSFCKREFRSA 19 (39)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CceECCCCCcccCCH
Confidence 457899999998654
No 51
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=56.09 E-value=5.5 Score=18.57 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=13.1
Q ss_pred CeEEcCCCCeeeeeeCC
Q 036116 6 NSLISDSIGVSFPIKDG 22 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dG 22 (53)
....|..|++.|.-...
T Consensus 6 kp~~C~~C~k~F~~~~~ 22 (48)
T 3iuf_A 6 KPYACDICGKRYKNRPG 22 (48)
T ss_dssp SCEECTTTCCEESSHHH
T ss_pred cCEECCCcCcccCCHHH
Confidence 45889999999975543
No 52
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=56.04 E-value=4 Score=27.82 Aligned_cols=15 Identities=7% Similarity=0.087 Sum_probs=12.1
Q ss_pred cccCCeEEcCCCCee
Q 036116 2 CEETNSLISDSIGVS 16 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~ 16 (53)
|..+|.++|..||+.
T Consensus 37 D~~~G~~vC~~CGlV 51 (345)
T 4bbr_M 37 RFSEGDVVCALCGLV 51 (345)
T ss_dssp EGGGTEEEETTTCBE
T ss_pred ECCCCcEEeCCCCCC
Confidence 346799999999975
No 53
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=55.68 E-value=3.9 Score=17.41 Aligned_cols=15 Identities=13% Similarity=0.124 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 10 k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSBCCTTTCCCBSSH
T ss_pred CCccCCCCCcccCcH
Confidence 357899999998643
No 54
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=54.64 E-value=4.5 Score=20.55 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=19.6
Q ss_pred CeEEcCCCCeeee---eeCCccccCCCC
Q 036116 6 NSLISDSIGVSFP---IKDGIPSLVPKD 30 (53)
Q Consensus 6 g~LiC~~c~~~YP---I~dGIPvLL~~e 30 (53)
..|.|..|+..|+ ...|=|+++++.
T Consensus 10 ~yl~CE~C~~~~~~~Cp~HGP~~fV~D~ 37 (39)
T 2l9z_A 10 FTIWCTLCDRAYPSDCPEHGPVTFVPDT 37 (39)
T ss_dssp CSEEEGGGTEEESSSBTTTBSCSCCCCC
T ss_pred hhhHHHHHhhhchhhchhcCCCcccCCC
Confidence 4699999999997 347777777764
No 55
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=53.56 E-value=6.6 Score=22.65 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=13.8
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-|+|..||+.+.|.+
T Consensus 82 ~HliC~~Cg~v~~~~~ 97 (131)
T 2o03_A 82 HHLVCRSCGSTIEVGD 97 (131)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred CEEEeCCCCCEEEECC
Confidence 4699999999999864
No 56
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=53.50 E-value=4.1 Score=27.50 Aligned_cols=16 Identities=6% Similarity=0.123 Sum_probs=12.8
Q ss_pred cccCCeEEcCCCCeee
Q 036116 2 CEETNSLISDSIGVSF 17 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~Y 17 (53)
|...|.++|..||..-
T Consensus 37 D~~~G~~vC~~CG~Vl 52 (345)
T 3k7a_M 37 RFSEGDVVCALCGLVL 52 (345)
T ss_dssp CSSSCSCCCSSSCCCC
T ss_pred ECCCCCEecCCCCeEc
Confidence 4567999999999753
No 57
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.49 E-value=4.3 Score=17.07 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.1
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|++.|.-
T Consensus 8 ~~~~C~~C~k~f~~ 21 (36)
T 2elr_A 8 KTHLCDMCGKKFKS 21 (36)
T ss_dssp SSCBCTTTCCBCSS
T ss_pred CCeecCcCCCCcCc
Confidence 45789999998864
No 58
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=53.35 E-value=4.3 Score=24.07 Aligned_cols=26 Identities=8% Similarity=0.056 Sum_probs=20.4
Q ss_pred cccCCeEEcCCCCeeeeeeCCccccC
Q 036116 2 CEETNSLISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 2 ~~~~g~LiC~~c~~~YPI~dGIPvLL 27 (53)
...+|...|++|+-.|.=..|-|-+-
T Consensus 53 ErkeG~q~CpqCktrYkr~kgsp~v~ 78 (93)
T 1weo_A 53 ERREGTQNCPQCKTRYKRLRGSPRVE 78 (93)
T ss_dssp HHHTSCSSCTTTCCCCCCCTTCCCCT
T ss_pred HHhccCccccccCCccccccCCCCcc
Confidence 44578899999999998777887443
No 59
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.08 E-value=6.4 Score=17.59 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (44)
T 2epv_A 11 KPYECNECGKAFIWKS 26 (44)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCCcccCchH
Confidence 4589999999996543
No 60
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=52.37 E-value=5 Score=22.77 Aligned_cols=15 Identities=13% Similarity=0.071 Sum_probs=10.3
Q ss_pred ccCCeEEcCCCCeee
Q 036116 3 EETNSLISDSIGVSF 17 (53)
Q Consensus 3 ~~~g~LiC~~c~~~Y 17 (53)
...|.+.|+.|+..|
T Consensus 41 ~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 41 QGTGIWQCSYCDYKF 55 (83)
T ss_dssp EETTEEEETTTCCEE
T ss_pred cCCCeEECCCCCCEe
Confidence 345678888887654
No 61
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=52.26 E-value=7.9 Score=16.82 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 10 ~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 10 TPYLCGQCGKSFTQR 24 (42)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999643
No 62
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.74 E-value=6.9 Score=17.44 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yts_A 11 KPYICNECGKSFIQKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCEECCCCChhhCChH
Confidence 4589999999997543
No 63
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=51.70 E-value=7.6 Score=16.94 Aligned_cols=16 Identities=31% Similarity=0.393 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (42)
T 2el5_A 9 NPYECSECGKAFNRKD 24 (42)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCccCCCcChhhCCHH
Confidence 4588999999997543
No 64
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.95 E-value=8.9 Score=19.69 Aligned_cols=13 Identities=8% Similarity=0.046 Sum_probs=9.7
Q ss_pred CCeEEcCCCCeee
Q 036116 5 TNSLISDSIGVSF 17 (53)
Q Consensus 5 ~g~LiC~~c~~~Y 17 (53)
...++|+.|+..|
T Consensus 35 ~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 35 GDRWACGKCGYTE 47 (50)
T ss_dssp SSEEECSSSCCEE
T ss_pred CCeEECCCCCCEE
Confidence 4578888888765
No 65
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.66 E-value=8.4 Score=17.21 Aligned_cols=15 Identities=20% Similarity=0.197 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 11 RHYECSECGKAFIQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 458899999999754
No 66
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=50.26 E-value=5.1 Score=20.09 Aligned_cols=23 Identities=9% Similarity=-0.062 Sum_probs=16.4
Q ss_pred CeEEcCCCCeeeeeeCCccccCC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLVP 28 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL~ 28 (53)
+...||.|+..+.-.+=+|++..
T Consensus 42 ~~~~CP~Cr~~~~~~~~~~~~~~ 64 (65)
T 1g25_A 42 GAGNCPECGTPLRKSNFRVQLFE 64 (65)
T ss_dssp TSSSCTTTCCCCSSCCCEEECCC
T ss_pred CCCcCCCCCCccccccceeeccc
Confidence 34679999988877666666554
No 67
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.16 E-value=8.7 Score=16.83 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2eof_A 11 KPYECNECQKAFNTKS 26 (44)
T ss_dssp CSEECTTTCCEESCHH
T ss_pred CCeECCCCCcccCCHh
Confidence 4588999999997543
No 68
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.91 E-value=9.1 Score=16.89 Aligned_cols=16 Identities=19% Similarity=0.121 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 11 KSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCEEETTTTEEESSSH
T ss_pred CCeECcccCcccCCHH
Confidence 4588999999996543
No 69
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.65 E-value=9.1 Score=16.65 Aligned_cols=15 Identities=13% Similarity=0.233 Sum_probs=11.8
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 10 KPYKCETCGARFVQV 24 (42)
T ss_dssp CSEECTTTCCEESSH
T ss_pred CCEeCCCcChhhCCH
Confidence 457899999998643
No 70
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.31 E-value=9.2 Score=16.61 Aligned_cols=15 Identities=27% Similarity=0.251 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 9 k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 9 RVYECQECGKSFRQK 23 (41)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCCcCCH
Confidence 457899999999654
No 71
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=49.26 E-value=9.3 Score=17.91 Aligned_cols=14 Identities=0% Similarity=-0.256 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|+..|.-
T Consensus 23 k~~~C~~C~k~f~~ 36 (54)
T 1yui_A 23 QPATCPICYAVIRQ 36 (54)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCccCCCCCcccCC
Confidence 45889999999864
No 72
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.24 E-value=9.9 Score=16.76 Aligned_cols=15 Identities=7% Similarity=0.217 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 11 KRYECSKCQATFNLR 25 (44)
T ss_dssp SSEECTTTCCEESCH
T ss_pred CCeECCCCCCccCCH
Confidence 458899999999754
No 73
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.96 E-value=8.5 Score=17.00 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CSEECSSSSCEESSSH
T ss_pred CCeECCCCCchhCCHH
Confidence 4588999999997543
No 74
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.88 E-value=8.5 Score=17.25 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLS 25 (46)
T ss_dssp CSEEETTTTEEESSH
T ss_pred CCeECcccChhhCCH
Confidence 457899999999654
No 75
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.85 E-value=9.6 Score=16.92 Aligned_cols=16 Identities=13% Similarity=0.314 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eow_A 11 KPYKCNECGKAFRARS 26 (46)
T ss_dssp CCEECTTSCCEESSHH
T ss_pred CCeeccccCChhcCHH
Confidence 4588999999997543
No 76
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.41 E-value=8.4 Score=17.20 Aligned_cols=15 Identities=13% Similarity=0.118 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 11 KPYECKVCSKAFTQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCCH
Confidence 458899999999644
No 77
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.06 E-value=9.5 Score=17.07 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em4_A 11 RPYECIECGKAFKTKS 26 (46)
T ss_dssp SSEECSSSCCEESSHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 4588999999997543
No 78
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.98 E-value=9.8 Score=16.89 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 11 KPYRCGECGKAFAQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 458899999999754
No 79
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.92 E-value=8.6 Score=17.16 Aligned_cols=15 Identities=13% Similarity=0.353 Sum_probs=11.8
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 11 KPFQCKECGMNFSWS 25 (46)
T ss_dssp CSEECSSSCCEESSS
T ss_pred CCeeCcccChhhCCH
Confidence 358899999999643
No 80
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=47.91 E-value=8.5 Score=23.17 Aligned_cols=18 Identities=11% Similarity=0.241 Sum_probs=14.9
Q ss_pred cCCeEEcCCCCeeeeeeC
Q 036116 4 ETNSLISDSIGVSFPIKD 21 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~d 21 (53)
....+.|..||..|.+.+
T Consensus 67 ~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 67 EEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp ECCEEEETTTCCEEEGGG
T ss_pred cCCcEECCCCCCEEeccc
Confidence 356899999999999865
No 81
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.67 E-value=10 Score=16.98 Aligned_cols=16 Identities=6% Similarity=0.169 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSK 26 (46)
T ss_dssp CCEECSSSCCEESSSH
T ss_pred CCEECcCCCCcCCCHH
Confidence 4588999999997543
No 82
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.62 E-value=10 Score=16.86 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 11 KPYNCEECGKAFIHD 25 (46)
T ss_dssp CSEECTTTCCEESSH
T ss_pred cCccCCCCCCCcCCH
Confidence 458899999998643
No 83
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=47.21 E-value=9.4 Score=17.09 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 11 KPFECAECGKSFSIS 25 (46)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCEECCCCCcccCCH
Confidence 458899999998643
No 84
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=47.10 E-value=7.6 Score=18.13 Aligned_cols=14 Identities=14% Similarity=0.377 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
.-..|+.|+++|.-
T Consensus 7 kp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 7 ARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCEETTTTEECSC
T ss_pred cCeECCCCCCccCC
Confidence 45789999999964
No 85
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.86 E-value=9.9 Score=16.94 Aligned_cols=16 Identities=13% Similarity=0.214 Sum_probs=12.6
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCCHH
Confidence 4589999999997543
No 86
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=46.77 E-value=5.9 Score=16.76 Aligned_cols=13 Identities=8% Similarity=-0.036 Sum_probs=9.8
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
..|+.|+..|.-.
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 4699999988643
No 87
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.51 E-value=11 Score=16.71 Aligned_cols=16 Identities=25% Similarity=0.314 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (45)
T 2epu_A 11 KPFECTHCGKSFRAKG 26 (45)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred cCccCCCCCCccCChH
Confidence 4588999999997543
No 88
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.44 E-value=10 Score=16.83 Aligned_cols=16 Identities=13% Similarity=0.164 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytf_A 11 KPFECSECQKAFNTKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCcCCCCCCcccCCHH
Confidence 4588999999997544
No 89
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.40 E-value=11 Score=16.89 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytp_A 11 RHYECSECGKAFARKS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCcCCcccCCHH
Confidence 4588999999997543
No 90
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.05 E-value=7.8 Score=17.08 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=12.3
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2eoj_A 11 NPYECCECGKVFSRKD 26 (44)
T ss_dssp CSCEETTTTEECSSHH
T ss_pred cCeeCCCCCCccCCHH
Confidence 3578999999987543
No 91
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=46.02 E-value=11 Score=14.56 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=10.1
Q ss_pred EEcC--CCCeeeeee
Q 036116 8 LISD--SIGVSFPIK 20 (53)
Q Consensus 8 LiC~--~c~~~YPI~ 20 (53)
..|. .|++.|.-.
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (29)
T 2ab3_A 3 YVCHFENCGRSFNDR 17 (29)
T ss_dssp EEECSTTTCEEESSH
T ss_pred CCCcCCcCcCccCCH
Confidence 5799 999998643
No 92
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.00 E-value=11 Score=16.81 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=12.7
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ene_A 11 KPYKCNECGKVFRHNS 26 (46)
T ss_dssp SSEECSSSCCEESSHH
T ss_pred CCeECCCCCchhCChH
Confidence 4589999999997544
No 93
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.96 E-value=10 Score=16.86 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytj_A 11 KPYICAECGKAFTIRS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCCCChhhCCHH
Confidence 4589999999997543
No 94
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=45.95 E-value=4.2 Score=17.09 Aligned_cols=14 Identities=14% Similarity=0.100 Sum_probs=10.5
Q ss_pred EEcCCCCeeeeeeC
Q 036116 8 LISDSIGVSFPIKD 21 (53)
Q Consensus 8 LiC~~c~~~YPI~d 21 (53)
..|+.|++.|.-..
T Consensus 3 ~~C~~C~k~f~~~~ 16 (32)
T 2kfq_A 3 FACPACPKRFMRSD 16 (32)
T ss_dssp SSSSSSCTTHHHHH
T ss_pred CCCCCCCcccCCHH
Confidence 46999999887544
No 95
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=45.83 E-value=7.9 Score=22.12 Aligned_cols=20 Identities=20% Similarity=0.112 Sum_probs=15.4
Q ss_pred CCeEEcCCCCeeeeeeCCcccc
Q 036116 5 TNSLISDSIGVSFPIKDGIPSL 26 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIPvL 26 (53)
.+.|.|..|+..|-.. |+-|
T Consensus 45 ~g~l~C~~Cg~~~~~~--i~~L 64 (85)
T 1wii_A 45 TGVISCTVCLEEFQTP--ITYL 64 (85)
T ss_dssp EEEEEESSSCCEEEEE--CCSS
T ss_pred EEEEEcccCCCeEEec--cCcc
Confidence 4789999999999763 5543
No 96
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=45.81 E-value=10 Score=21.94 Aligned_cols=17 Identities=12% Similarity=0.024 Sum_probs=14.1
Q ss_pred CCeEEcCCCCeeeeeeC
Q 036116 5 TNSLISDSIGVSFPIKD 21 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~d 21 (53)
.....|..||..|.+.+
T Consensus 71 p~~~~C~~CG~~~e~~~ 87 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNA 87 (119)
T ss_dssp CCEEECSSSSCEECSCC
T ss_pred cceEEcCCCCCEEeCCC
Confidence 46789999999999843
No 97
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.49 E-value=11 Score=16.71 Aligned_cols=15 Identities=27% Similarity=0.341 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emy_A 11 NPYECHECGKAFSRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred cCcCCCCCCcccCcH
Confidence 458899999999744
No 98
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=45.43 E-value=6 Score=20.54 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
+...|+.|+..|.++
T Consensus 46 ~~~~C~~C~~~~~~r 60 (60)
T 1vyx_A 46 RNTACQICGVVYNTR 60 (60)
T ss_dssp TCSBCTTTCCBCCCC
T ss_pred CCCccCCCCCeeecC
Confidence 457899999999875
No 99
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.37 E-value=11 Score=16.79 Aligned_cols=15 Identities=20% Similarity=0.290 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 11 KPYKCSDCGKAFTRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCEECcccCCccCCH
Confidence 458999999998643
No 100
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.35 E-value=12 Score=16.61 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=12.8
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRV 26 (46)
T ss_dssp CSEECTTTCCEESSSH
T ss_pred CCeECCCCCcccCCHH
Confidence 4589999999997554
No 101
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.09 E-value=11 Score=16.77 Aligned_cols=15 Identities=13% Similarity=0.158 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 11 RPYGCNECGKNFGRH 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCEEccccCcccCCH
Confidence 458999999999754
No 102
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.03 E-value=13 Score=16.51 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 11 KPYGCNECGKTFSQK 25 (46)
T ss_dssp CCEEETTTTEEESSH
T ss_pred cCeECCCCCcccCch
Confidence 458899999999754
No 103
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=45.00 E-value=12 Score=16.67 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ema_A 11 KRYKCNECGKVFSRNS 26 (46)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred cCcCCCCCcchhCCHH
Confidence 4589999999997543
No 104
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.92 E-value=12 Score=16.59 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKF 26 (46)
T ss_dssp CSEEETTTTEEESCHH
T ss_pred CCeECCCCCCccCCHH
Confidence 4588999999997543
No 105
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.90 E-value=12 Score=16.68 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 11 RPYICTVCGKAFTDRS 26 (46)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4588999999987543
No 106
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.77 E-value=11 Score=16.82 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 11 KPFKCKECGKAFRQN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCEECCcCCchhCCH
Confidence 458899999998654
No 107
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.57 E-value=11 Score=16.74 Aligned_cols=16 Identities=13% Similarity=0.248 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQ 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCCCcCCccCCHH
Confidence 4588999999997543
No 108
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=44.48 E-value=13 Score=17.68 Aligned_cols=15 Identities=0% Similarity=-0.062 Sum_probs=10.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 9 k~~~C~~C~k~f~~~ 23 (66)
T 2drp_A 9 HTYRCKVCSRVYTHI 23 (66)
T ss_dssp TEEECTTTCCEESSH
T ss_pred cceECCCCcchhCCH
Confidence 456777887777643
No 109
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=44.26 E-value=5.4 Score=22.77 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=17.0
Q ss_pred ccCCeEEcCCCCeeeeeeCCcc
Q 036116 3 EETNSLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 3 ~~~g~LiC~~c~~~YPI~dGIP 24 (53)
..++.++|..+...|..++||+
T Consensus 99 ~~~~~~yC~~~~~~~~~~~g~~ 120 (122)
T 1m3v_A 99 DEDERLITRLENTQFDAANGID 120 (122)
T ss_dssp CTTCCCCEECTTTTTTCCSCCC
T ss_pred ecCCEeEccCcchhchhhcCCC
Confidence 3457788888888888888875
No 110
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.19 E-value=13 Score=16.55 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emf_A 11 KHFECTECGKAFTRKS 26 (46)
T ss_dssp CCEECSSSCCEESCHH
T ss_pred CCeECCCCCchhCCHH
Confidence 4588999999997543
No 111
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.07 E-value=13 Score=16.52 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNS 26 (46)
T ss_dssp CCEECTTTCCEESSHH
T ss_pred CCeECCCCCchhCCHH
Confidence 4588999999997543
No 112
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.00 E-value=13 Score=16.53 Aligned_cols=15 Identities=20% Similarity=0.007 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 11 KSHQCRECGEIFFQY 25 (46)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEEccccChhhCCH
Confidence 458999999999754
No 113
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.85 E-value=13 Score=16.49 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2epw_A 11 KPCKCTECGKAFCWKS 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCCCCCCccCCHH
Confidence 4588999999997544
No 114
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.82 E-value=12 Score=16.66 Aligned_cols=16 Identities=13% Similarity=0.252 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em7_A 11 KPYKCEECGKGFICRR 26 (46)
T ss_dssp CSEECSSSCCEESCHH
T ss_pred cCccCCCccchhCCHH
Confidence 4588999999997543
No 115
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.71 E-value=13 Score=16.33 Aligned_cols=16 Identities=13% Similarity=0.131 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKS 24 (44)
T ss_dssp CCEECSSSSCEESSHH
T ss_pred cCccCCCCCcccCCHH
Confidence 4589999999987543
No 116
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.44 E-value=12 Score=19.40 Aligned_cols=25 Identities=20% Similarity=0.050 Sum_probs=18.6
Q ss_pred cCCeEEcCCCCeeeeeeCCccccCC
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSLVP 28 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvLL~ 28 (53)
....+.|+.|...|.-.+-.|++++
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~ 36 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLH 36 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECS
T ss_pred ccCCCCCccCCccccccCCCeEECC
Confidence 3467889999988876665677764
No 117
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.32 E-value=12 Score=16.66 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2em5_A 11 KSHQCHECGRGFTLKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeECCcCCCccCCHH
Confidence 4589999999996543
No 118
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=43.28 E-value=13 Score=16.44 Aligned_cols=16 Identities=19% Similarity=0.202 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2em9_A 11 KPYNCKECGKSFRWAS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeECCccccccCChH
Confidence 4588999999997543
No 119
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.09 E-value=12 Score=16.53 Aligned_cols=15 Identities=20% Similarity=0.454 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 11 KPYVCDYCGKAFGLS 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCChhhCCH
Confidence 458999999999654
No 120
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=43.06 E-value=11 Score=16.70 Aligned_cols=16 Identities=13% Similarity=0.223 Sum_probs=12.6
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKS 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CceECCCCCchhCCHH
Confidence 4588999999997544
No 121
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.03 E-value=13 Score=16.53 Aligned_cols=16 Identities=13% Similarity=0.297 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en1_A 11 KPFKCEECGKRFTQNS 26 (46)
T ss_dssp CSEEETTTTEEESSHH
T ss_pred CCeeCCCCCcccCCHH
Confidence 4588999999997543
No 122
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=43.00 E-value=18 Score=19.17 Aligned_cols=15 Identities=13% Similarity=0.344 Sum_probs=9.6
Q ss_pred cCCeEEcC-CCCeeee
Q 036116 4 ETNSLISD-SIGVSFP 18 (53)
Q Consensus 4 ~~g~LiC~-~c~~~YP 18 (53)
....+.|. .|..+|=
T Consensus 21 ~~~mI~CD~~C~~WfH 36 (65)
T 2vpb_A 21 DQDAILCEASCQKWFH 36 (65)
T ss_dssp TSCEEEBTTTTCCEEE
T ss_pred CCCeEecccCccccCc
Confidence 44566777 7777763
No 123
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.97 E-value=8.1 Score=21.08 Aligned_cols=19 Identities=5% Similarity=0.146 Sum_probs=15.1
Q ss_pred CeEEcCCCCeeeeeeCCcc
Q 036116 6 NSLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIP 24 (53)
+...||.|+..|+++..++
T Consensus 57 ~~~~CplCr~~~~~~~~~~ 75 (80)
T 2d8s_A 57 DTRCCELCKYEFIMETKLS 75 (80)
T ss_dssp CCSBCSSSCCBCCCCCCSC
T ss_pred CCCCCCCCCCeeecCcccC
Confidence 3468999999999887654
No 124
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=42.95 E-value=14 Score=17.95 Aligned_cols=16 Identities=0% Similarity=-0.068 Sum_probs=9.9
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
..+.|+.|+..|.-.+
T Consensus 38 k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 38 GTFRCTFCHTEVEEDE 53 (62)
T ss_dssp TEEBCSSSCCBCEECT
T ss_pred CCEECCCCCCccccCc
Confidence 3466777777765543
No 125
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.90 E-value=13 Score=16.54 Aligned_cols=15 Identities=7% Similarity=0.124 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 11 KPYKCVECGKGYKRR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECcccCchhCCH
Confidence 458899999998643
No 126
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.62 E-value=13 Score=16.38 Aligned_cols=16 Identities=25% Similarity=0.247 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2en8_A 11 KSHTCDECGKNFCYIS 26 (46)
T ss_dssp SSEECTTTCCEESSHH
T ss_pred CCeECCCcCcccCCHH
Confidence 4588999999997543
No 127
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.58 E-value=8.3 Score=16.87 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 10 k~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQ 25 (42)
T ss_dssp CCBCCSSSCCCBSSHH
T ss_pred CCEECCCCCCccCCHH
Confidence 4578999999987543
No 128
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=42.39 E-value=6.8 Score=25.27 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=13.2
Q ss_pred eeeeeCCccccCCCCCc
Q 036116 16 SFPIKDGIPSLVPKDGK 32 (53)
Q Consensus 16 ~YPI~dGIPvLL~~ear 32 (53)
.=+|+.|||+|.|--.+
T Consensus 66 ~~~irGGiPvlfP~~gr 82 (270)
T 1jov_A 66 GNAIRGGVPICYPWFGG 82 (270)
T ss_dssp TSCCSBSCCEEBSSCGG
T ss_pred CCCccCccEEEEeccCC
Confidence 34799999999996544
No 129
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.36 E-value=8.4 Score=16.70 Aligned_cols=15 Identities=7% Similarity=0.029 Sum_probs=11.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 9 k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 9 KPYSCAECKETFSDN 23 (42)
T ss_dssp CSCBCTTTCCBCSSH
T ss_pred CCeECCCCCCccCCH
Confidence 357899999998643
No 130
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.33 E-value=14 Score=16.42 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2enc_A 11 KPFKCEECGKGFYTN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCcCCCCCCCcCCCh
Confidence 458899999998654
No 131
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.19 E-value=13 Score=16.51 Aligned_cols=16 Identities=25% Similarity=0.252 Sum_probs=12.3
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep2_A 11 KPYECSICGKSFTKKS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCcCCCCCCcccCCHH
Confidence 4588999999987543
No 132
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.18 E-value=7.7 Score=16.85 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=11.7
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQK 24 (42)
T ss_dssp CSBCCTTTTCCBSSH
T ss_pred CCeeCCCccchhCCH
Confidence 357899999998754
No 133
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.18 E-value=13 Score=16.49 Aligned_cols=15 Identities=13% Similarity=0.233 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2ytk_A 11 KPYKCNECGKVFTQN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCEeCCcCCCccCCH
Confidence 458899999999643
No 134
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.87 E-value=7.6 Score=17.24 Aligned_cols=15 Identities=13% Similarity=0.100 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 11 TTSECQECGKIFRHS 25 (44)
T ss_dssp CCCCCTTTCCCCSSH
T ss_pred cCeECCCCCcccCCH
Confidence 457899999999754
No 135
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=41.85 E-value=6.2 Score=19.24 Aligned_cols=19 Identities=11% Similarity=-0.102 Sum_probs=13.7
Q ss_pred EEcCCCCeeeeeeCCcccc
Q 036116 8 LISDSIGVSFPIKDGIPSL 26 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPvL 26 (53)
..||.|+..+...+=+|+.
T Consensus 45 ~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 45 NTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp SBCTTTCCBCTTTCEEECC
T ss_pred CCCCCCCccCCccceeeee
Confidence 3688898888776666654
No 136
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.75 E-value=15 Score=16.59 Aligned_cols=16 Identities=13% Similarity=0.115 Sum_probs=12.4
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
+....|+.|++.|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 10 RKQVACEICGKIFRDV 25 (48)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 3468899999998644
No 137
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=41.68 E-value=13 Score=17.93 Aligned_cols=11 Identities=18% Similarity=0.120 Sum_probs=9.1
Q ss_pred eEEcCCCCeee
Q 036116 7 SLISDSIGVSF 17 (53)
Q Consensus 7 ~LiC~~c~~~Y 17 (53)
.++||.|.+.+
T Consensus 5 GFiCP~C~~~l 15 (34)
T 3mjh_B 5 GFICPQCMKSL 15 (34)
T ss_dssp EEECTTTCCEE
T ss_pred ccCCcHHHHHc
Confidence 49999998765
No 138
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=41.68 E-value=14 Score=23.85 Aligned_cols=17 Identities=35% Similarity=0.479 Sum_probs=14.0
Q ss_pred eEEcCCCCeeeeeeCCcc
Q 036116 7 SLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGIP 24 (53)
.|.|+.|+..|+.. ||-
T Consensus 22 ~l~Cp~C~~~~~F~-gv~ 38 (206)
T 3flo_B 22 ELSCPSCDKRFPFG-GIV 38 (206)
T ss_dssp EEECTTTCCEEEEC-SSS
T ss_pred EEECCCCCCccCCC-Ccc
Confidence 69999999999855 664
No 139
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.63 E-value=8.7 Score=17.14 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2emg_A 11 NPFICSECGKVFTHKT 26 (46)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCEECCccCcccCCHH
Confidence 3578999999986543
No 140
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.46 E-value=12 Score=19.02 Aligned_cols=23 Identities=9% Similarity=-0.003 Sum_probs=16.5
Q ss_pred CeEEcCCCCeeeeeeCCccccCC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLVP 28 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL~ 28 (53)
+...||.|+..+...+=.|+...
T Consensus 58 ~~~~CP~Cr~~~~~~~~~~n~~l 80 (85)
T 2ecv_A 58 GESSCPVCRISYQPENIRPNRHV 80 (85)
T ss_dssp SCCCCTTTCCSSCSSSCCCSCCC
T ss_pred CCCcCCCCCCccCHHhcCccHHH
Confidence 46789999998887665555443
No 141
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.46 E-value=13 Score=16.45 Aligned_cols=15 Identities=13% Similarity=0.434 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emp_A 11 KPYMCNECGKAFSVY 25 (46)
T ss_dssp CSEECSSSCCEESCH
T ss_pred cCeECCCCCchhCCH
Confidence 458899999998754
No 142
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.22 E-value=14 Score=16.40 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSEECSSSCCEESSSH
T ss_pred CCeECCcCCchhCCHH
Confidence 4588999999987543
No 143
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=41.18 E-value=12 Score=18.59 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=14.4
Q ss_pred EEcCCCCeeeeeeCCccccC
Q 036116 8 LISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPvLL 27 (53)
..||.|+..+...+=+|+.|
T Consensus 52 ~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 52 NTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp SBCTTTCCBCCCCSCCCCCC
T ss_pred CCCCCCCCccChhheeeccC
Confidence 47899988887776666543
No 144
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=40.96 E-value=12 Score=19.11 Aligned_cols=23 Identities=17% Similarity=0.153 Sum_probs=16.5
Q ss_pred CeEEcCCCCeeeeeeCCccccCC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLVP 28 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL~ 28 (53)
+...||.|+..+...+=.|+...
T Consensus 58 ~~~~CP~Cr~~~~~~~~~~n~~l 80 (85)
T 2ecw_A 58 GKGNCPVCRVPYPFGNLKPNLHV 80 (85)
T ss_dssp SCBCCTTTCCCCCTTCCEECSCC
T ss_pred CCCCCCCCCCcCCHHhCCcCHHH
Confidence 47889999998887655555443
No 145
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=40.61 E-value=14 Score=20.46 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=7.4
Q ss_pred EEcCCCCeeeeeeCC
Q 036116 8 LISDSIGVSFPIKDG 22 (53)
Q Consensus 8 LiC~~c~~~YPI~dG 22 (53)
+.|+ |++.+-+++|
T Consensus 5 v~C~-C~~~~~~~~~ 18 (71)
T 1gh9_A 5 FRCD-CGRALYSREG 18 (71)
T ss_dssp EEET-TSCCEEEETT
T ss_pred EECC-CCCEEEEcCC
Confidence 4555 5555555543
No 146
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.47 E-value=11 Score=16.68 Aligned_cols=16 Identities=13% Similarity=0.409 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq3_A 11 KPYECNQCGKAFSVRS 26 (46)
T ss_dssp CSSEETTTTEECSSHH
T ss_pred CCeECCCCChhhCCHH
Confidence 3578999999986543
No 147
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=40.43 E-value=14 Score=21.55 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=11.0
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
-.|+.||.+|-..
T Consensus 80 ~RC~eCG~~fkL~ 92 (98)
T 1v54_F 80 QRCPSCGTHYKLV 92 (98)
T ss_dssp EECTTTCCEEEEE
T ss_pred eECCCCCeEEEEe
Confidence 4899999999764
No 148
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=40.43 E-value=14 Score=16.47 Aligned_cols=16 Identities=25% Similarity=0.077 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKL 26 (46)
T ss_dssp CSEECSSSSCEESSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4588999999987543
No 149
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.32 E-value=14 Score=16.27 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emm_A 11 RPHKCNECGKSFIQS 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeeCCCCChhhCCH
Confidence 458899999999654
No 150
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.08 E-value=21 Score=18.21 Aligned_cols=16 Identities=19% Similarity=-0.020 Sum_probs=10.4
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...+.|..|..+|=..
T Consensus 20 ~~mI~Cd~C~~WfH~~ 35 (64)
T 1we9_A 20 EFWICCDLCEMWFHGK 35 (64)
T ss_dssp SCEEECSSSCCEEETT
T ss_pred CCEEEccCCCCCCCcc
Confidence 3466777777777554
No 151
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.71 E-value=9.4 Score=17.09 Aligned_cols=16 Identities=13% Similarity=0.109 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 11 KPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSCBCTTTCCBCSSSH
T ss_pred CCcCCCCcCchhCCHH
Confidence 3578999999997543
No 152
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.58 E-value=10 Score=16.92 Aligned_cols=15 Identities=7% Similarity=0.091 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 11 KLFKCNECKKTFTQS 25 (46)
T ss_dssp CCCBCTTTCCBCSSH
T ss_pred CCEECCccCcccCCH
Confidence 457899999998643
No 153
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=39.52 E-value=22 Score=18.31 Aligned_cols=16 Identities=25% Similarity=0.266 Sum_probs=12.5
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
.+.++|..||...+..
T Consensus 16 ~~~~~C~~CG~~i~~~ 31 (49)
T 2l8e_A 16 ANLLKCEYCGKYAPAE 31 (49)
T ss_dssp CSEEECTTTCCEEEGG
T ss_pred CCCCcChhccCccccc
Confidence 4567899999987764
No 154
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.43 E-value=15 Score=16.26 Aligned_cols=16 Identities=19% Similarity=0.121 Sum_probs=12.5
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ep0_A 11 KPYKCDVCHKSFRYGS 26 (46)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred CCeeCcccCcccCChH
Confidence 4588999999997543
No 155
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=39.37 E-value=18 Score=18.56 Aligned_cols=16 Identities=19% Similarity=0.316 Sum_probs=13.4
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|=..
T Consensus 21 ~~ll~Cd~C~~~~H~~ 36 (66)
T 2yt5_A 21 NEMVICDKCGQGYHQL 36 (66)
T ss_dssp BCEEECSSSCCEEETT
T ss_pred CCEEECCCCChHHHhh
Confidence 5689999999999655
No 156
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=39.23 E-value=15 Score=21.26 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=13.3
Q ss_pred cCCeEEcCCCCeeeee
Q 036116 4 ETNSLISDSIGVSFPI 19 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI 19 (53)
....++|-.||..|-+
T Consensus 18 ~~d~iiClecGK~fK~ 33 (87)
T 2jsp_A 18 QDDHIVCLECGGSFKS 33 (87)
T ss_dssp CSSCEECTBTCCEESB
T ss_pred CCCceEecccchhhHH
Confidence 4568999999999874
No 157
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.06 E-value=9 Score=17.10 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 3578999999987543
No 158
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.96 E-value=8.9 Score=17.11 Aligned_cols=16 Identities=13% Similarity=0.270 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHS 26 (46)
T ss_dssp CCCCCTTTTCCCSSHH
T ss_pred CCeECCcCChhhCCHH
Confidence 4578999999986543
No 159
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.87 E-value=9.1 Score=17.21 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cccCCCCCCcccCcHH
Confidence 3578999999987554
No 160
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=38.65 E-value=17 Score=17.60 Aligned_cols=15 Identities=7% Similarity=-0.026 Sum_probs=10.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 48 ~~~~C~~C~~~f~~~ 62 (73)
T 1f2i_G 48 KPFQCRICMRNFSRS 62 (73)
T ss_dssp CCEECTTTCCEESCH
T ss_pred CCeECCCCCchhCCH
Confidence 347788888887543
No 161
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=37.98 E-value=17 Score=24.39 Aligned_cols=14 Identities=0% Similarity=0.031 Sum_probs=12.6
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
++.|.+|+..|.+.
T Consensus 265 ev~C~FC~~~Y~f~ 278 (291)
T 1vzy_A 265 EAVCHFCNEKYLFT 278 (291)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEeeCCCCEEEeC
Confidence 79999999999875
No 162
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=37.96 E-value=15 Score=21.36 Aligned_cols=16 Identities=13% Similarity=-0.070 Sum_probs=14.7
Q ss_pred eEEcCCCCeeeeeeCC
Q 036116 7 SLISDSIGVSFPIKDG 22 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dG 22 (53)
.++|+.|+..++|.+.
T Consensus 26 ~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 26 RLACRNCDYSEIAATS 41 (113)
T ss_dssp CEECSSSCCEECCSCS
T ss_pred EEECCCCCCeEEcCCC
Confidence 7999999999999876
No 163
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.81 E-value=17 Score=16.11 Aligned_cols=15 Identities=13% Similarity=0.200 Sum_probs=11.7
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytd_A 11 KPYKCSECGKAFHRH 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCCeeCCh
Confidence 458899999998643
No 164
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.76 E-value=10 Score=16.56 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 11 KPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSCCTTTCCCCSSHH
T ss_pred cCeECCCCCCccCCHH
Confidence 3578999999987543
No 165
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=37.62 E-value=15 Score=20.64 Aligned_cols=13 Identities=8% Similarity=0.082 Sum_probs=11.1
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
-.|+.||.+|-..
T Consensus 57 ~RC~eCG~~fkL~ 69 (80)
T 2odx_A 57 ARCWECGSVYKLN 69 (80)
T ss_dssp EECSSSCCEEEEC
T ss_pred eECCCCCeEEEEE
Confidence 4899999999865
No 166
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=37.46 E-value=15 Score=16.89 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|+..|.-.
T Consensus 28 ~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTK 42 (57)
T ss_dssp CCEECSSSSCEESSH
T ss_pred CCccCCCCCchhcCH
Confidence 357899999998643
No 167
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.15 E-value=10 Score=16.85 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 11 KPYKCSDCGKSFTWK 25 (46)
T ss_dssp CSCBCSSSCCBCSSH
T ss_pred CCccCCccChhhCCH
Confidence 357899999998643
No 168
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=36.80 E-value=18 Score=16.62 Aligned_cols=15 Identities=7% Similarity=-0.075 Sum_probs=10.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|+..|.-.
T Consensus 31 ~~~~C~~C~~~f~~~ 45 (57)
T 3uk3_C 31 KPYKCEFCEYAAAQK 45 (57)
T ss_dssp CCEECSSSSCEESSH
T ss_pred CCcCCCCCcchhCCH
Confidence 347889998888643
No 169
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=36.69 E-value=17 Score=16.95 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|+..|.-..
T Consensus 29 ~~~~C~~C~~~f~~~~ 44 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRD 44 (60)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCccCCCCCCccCCHH
Confidence 3588999999986543
No 170
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=36.67 E-value=13 Score=20.10 Aligned_cols=14 Identities=29% Similarity=0.332 Sum_probs=11.1
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
.-+|+.|++.|.-+
T Consensus 28 ~h~C~~Cgk~F~~~ 41 (85)
T 2lv2_A 28 CHLCPVCGESFASK 41 (85)
T ss_dssp TEECTTSCCEESSH
T ss_pred CEECCCCCCCcCcH
Confidence 46899999998754
No 171
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.62 E-value=11 Score=16.80 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTS 26 (46)
T ss_dssp CSSSCCSSCCCCSSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 3478999999987543
No 172
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=36.53 E-value=25 Score=18.68 Aligned_cols=16 Identities=13% Similarity=-0.118 Sum_probs=11.9
Q ss_pred cCCeEEcCCCCeeeee
Q 036116 4 ETNSLISDSIGVSFPI 19 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI 19 (53)
....+.|..|..+|=.
T Consensus 22 ~~~MI~Cd~C~~WfH~ 37 (75)
T 3kqi_A 22 TRFMIECDACKDWFHG 37 (75)
T ss_dssp TSCEEECTTTCCEEEH
T ss_pred CCCEEEcCCCCCCEec
Confidence 3457888999888854
No 173
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.19 E-value=11 Score=16.81 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCChh
Confidence 3468999999987543
No 174
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=36.07 E-value=23 Score=17.25 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=12.5
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
+..|.|..|.++|-..
T Consensus 13 ~~ll~Cd~C~~~~H~~ 28 (51)
T 1f62_A 13 DKLILCDECNKAFHLF 28 (51)
T ss_dssp SCCEECTTTCCEECHH
T ss_pred CCEEECCCCChhhCcc
Confidence 3579999999999543
No 175
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=35.99 E-value=25 Score=20.15 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=11.7
Q ss_pred cCCeEEcC-CCCeeeeee
Q 036116 4 ETNSLISD-SIGVSFPIK 20 (53)
Q Consensus 4 ~~g~LiC~-~c~~~YPI~ 20 (53)
....+.|. .|..||=-.
T Consensus 16 ~~~mi~Cdd~C~~WfH~~ 33 (105)
T 2xb1_A 16 DQDAILCEASCQKWFHRE 33 (105)
T ss_dssp TSCEEECTTTTCCEEEGG
T ss_pred CCCEEEecCCcccccccc
Confidence 34567787 888888654
No 176
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.89 E-value=12 Score=16.74 Aligned_cols=16 Identities=6% Similarity=0.150 Sum_probs=12.3
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRL 26 (46)
T ss_dssp SSCBCSSSCCBCSSHH
T ss_pred CCeeCcccCchhCCHH
Confidence 4578999999987543
No 177
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.87 E-value=11 Score=16.85 Aligned_cols=16 Identities=13% Similarity=0.302 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2yth_A 11 KPFQCEECGKRFTQNS 26 (46)
T ss_dssp SSBCCSSSCCCBSSHH
T ss_pred cCCCCCCCCcccCCHH
Confidence 3578999999987543
No 178
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.83 E-value=13 Score=16.47 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.4
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEETTTTEECSSHH
T ss_pred CCeECCCcChhhCCHH
Confidence 3578999999997544
No 179
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=35.73 E-value=13 Score=20.46 Aligned_cols=18 Identities=28% Similarity=0.241 Sum_probs=14.5
Q ss_pred CCeEEcCCCCeeeeeeCC
Q 036116 5 TNSLISDSIGVSFPIKDG 22 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dG 22 (53)
.....||.|+..|..+.|
T Consensus 80 ~~~~~CP~CR~~~~~~~g 97 (114)
T 1v87_A 80 DGSLQCPSCKTIYGEKTG 97 (114)
T ss_dssp SSCCBCTTTCCBSSSCSS
T ss_pred CCCCcCCCCCCccCCCCC
Confidence 346799999999987765
No 180
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=35.69 E-value=14 Score=22.10 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=11.9
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
.+.|..||+.|...
T Consensus 132 ~y~C~~Cg~~~~~~ 145 (165)
T 2lcq_A 132 RYVCIGCGRKFSTL 145 (165)
T ss_dssp CEEESSSCCEESSC
T ss_pred EEECCCCCCcccCC
Confidence 58999999999854
No 181
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=35.49 E-value=16 Score=17.50 Aligned_cols=14 Identities=29% Similarity=0.309 Sum_probs=11.8
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
.|.|..||...+|.
T Consensus 21 ~l~C~aCG~~~~v~ 34 (36)
T 1k81_A 21 LLKCMACGAIRPIR 34 (36)
T ss_dssp EEEEETTTEEEEEC
T ss_pred EEEhhcCCCccccc
Confidence 47899999998884
No 182
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.41 E-value=11 Score=16.67 Aligned_cols=16 Identities=25% Similarity=0.243 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ep1_A 11 KPYECSDCGKSFIKKS 26 (46)
T ss_dssp CSSCCSSSCCCCSSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 3578999999986543
No 183
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics, protein structure initiative, PSI, chaperone; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Probab=35.25 E-value=19 Score=24.45 Aligned_cols=15 Identities=0% Similarity=0.142 Sum_probs=12.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
-++.|.+|+..|.+.
T Consensus 271 iev~C~FC~~~Y~F~ 285 (302)
T 1vq0_A 271 GEVVCKWCNTRYVFS 285 (302)
T ss_dssp EEEECTTTCCEEEEC
T ss_pred cEEEeeCCCCEEEeC
Confidence 478999999999875
No 184
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.20 E-value=12 Score=16.72 Aligned_cols=15 Identities=20% Similarity=0.273 Sum_probs=11.7
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 11 KCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCBCSSSCCBCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 357899999998654
No 185
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=34.80 E-value=20 Score=21.17 Aligned_cols=15 Identities=7% Similarity=0.149 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
..+.|+.|.++|-|.
T Consensus 132 ~~v~C~sCSl~~~v~ 146 (155)
T 2l6l_A 132 SLISCDTCSLIIELL 146 (155)
T ss_dssp CEEECSSSSCEEEEE
T ss_pred CEEECCCCceEEEEE
Confidence 368899999998775
No 186
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.67 E-value=10 Score=16.91 Aligned_cols=15 Identities=7% Similarity=-0.055 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 11 KPYECKECRKTFIQI 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCCcCchhCCH
Confidence 357899999998654
No 187
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=34.36 E-value=17 Score=23.37 Aligned_cols=13 Identities=8% Similarity=0.082 Sum_probs=10.1
Q ss_pred CCeEEcCCCCeee
Q 036116 5 TNSLISDSIGVSF 17 (53)
Q Consensus 5 ~g~LiC~~c~~~Y 17 (53)
...+.||.||+.-
T Consensus 220 ~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 220 GDMITCPYCGRIL 232 (256)
T ss_dssp SSCEECTTTCCEE
T ss_pred CCEEECCCCCeeE
Confidence 3568999999853
No 188
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.15 E-value=13 Score=16.53 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSCBCTTTCCBCSSHH
T ss_pred cCeECCCCCCeeCCHH
Confidence 3578999999987543
No 189
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.09 E-value=19 Score=17.43 Aligned_cols=15 Identities=13% Similarity=-0.022 Sum_probs=9.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 8 ~~~~C~~C~k~f~~~ 22 (70)
T 1x5w_A 8 HPEKCSECSYSCSSK 22 (70)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 346777777777543
No 190
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.05 E-value=23 Score=16.49 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=11.9
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (54)
T 2eps_A 11 KPYICQSCGKGFSRPD 26 (54)
T ss_dssp CCEECSSSCCEESSHH
T ss_pred CCeECCCCCcccCCHH
Confidence 4578999998886543
No 191
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.02 E-value=13 Score=16.47 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2eop_A 11 KPHECRECGKSFSFNS 26 (46)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCeeCCCCCchhCCHH
Confidence 3578999999986543
No 192
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.00 E-value=20 Score=17.64 Aligned_cols=13 Identities=15% Similarity=0.176 Sum_probs=6.9
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
..|+.|++.|.-.
T Consensus 39 ~~C~~C~k~f~~~ 51 (78)
T 2d9h_A 39 FPCEFCGKRFEKP 51 (78)
T ss_dssp EECTTTCCEESSH
T ss_pred cCCCCCCchhCCH
Confidence 4555555555433
No 193
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=33.93 E-value=11 Score=16.83 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 11 KPFKCVECGKGFSRRS 26 (46)
T ss_dssp CSBCCSSSCCCBSSTT
T ss_pred CCcccCccCcccCCHH
Confidence 3578999999987543
No 194
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=33.89 E-value=20 Score=18.09 Aligned_cols=14 Identities=14% Similarity=0.183 Sum_probs=8.6
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
..+.|+.|+..|.-
T Consensus 6 ~~~~C~~C~~~f~~ 19 (95)
T 2yt9_A 6 SGVACEICGKIFRD 19 (95)
T ss_dssp SCEECSSSCCEESS
T ss_pred CCeECCCCCCccCC
Confidence 45667777666653
No 195
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.89 E-value=21 Score=17.45 Aligned_cols=15 Identities=13% Similarity=0.093 Sum_probs=10.2
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
..+.|+.|++.|.-.
T Consensus 13 k~~~C~~C~k~f~~~ 27 (72)
T 1x6e_A 13 KPYGCVECGKAFSRS 27 (72)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCccCCCCCCccCCH
Confidence 356788888777543
No 196
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.76 E-value=12 Score=16.64 Aligned_cols=15 Identities=13% Similarity=0.290 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 11 RPFKCNECGKGFGRR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 347899999998654
No 197
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=33.45 E-value=32 Score=18.42 Aligned_cols=15 Identities=7% Similarity=-0.297 Sum_probs=10.1
Q ss_pred CCeEEcCCCCeeeee
Q 036116 5 TNSLISDSIGVSFPI 19 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI 19 (53)
...+.|..|..||=.
T Consensus 25 ~~MIqCd~C~~WfH~ 39 (79)
T 1wep_A 25 HFMIECGLCQDWFHG 39 (79)
T ss_dssp SCEEEBTTTCCEEEH
T ss_pred CceEEcCCCCCcEEe
Confidence 456777777777654
No 198
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.45 E-value=11 Score=16.86 Aligned_cols=15 Identities=13% Similarity=0.022 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 11 RGHRCSDCGKFFLQA 25 (46)
T ss_dssp SSCCCSSSCCCCSSH
T ss_pred CCcCCCCCCCeeCCh
Confidence 357899999998654
No 199
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.33 E-value=23 Score=17.48 Aligned_cols=13 Identities=8% Similarity=-0.105 Sum_probs=7.9
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...|+.|++.|.-
T Consensus 15 ~~~C~~C~k~f~~ 27 (77)
T 2ct1_A 15 PYECYICHARFTQ 27 (77)
T ss_dssp SEECTTTCCEESC
T ss_pred CeECCCcCchhCC
Confidence 3566666666653
No 200
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.26 E-value=13 Score=16.43 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 11 KLYNCKECGKSFSRA 25 (46)
T ss_dssp CCCCBTTTTBCCSCH
T ss_pred CCeECCCCCCccCch
Confidence 357899999998643
No 201
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.13 E-value=13 Score=16.40 Aligned_cols=15 Identities=7% Similarity=0.262 Sum_probs=11.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 9 k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 9 GAFFCNECDCRFSEE 23 (43)
T ss_dssp CCBCCSSSCCCBSSH
T ss_pred CCEECCCCCCeeCCh
Confidence 357899999998643
No 202
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=33.05 E-value=33 Score=17.02 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=12.5
Q ss_pred cCCeEEcC-CCCeeeeee
Q 036116 4 ETNSLISD-SIGVSFPIK 20 (53)
Q Consensus 4 ~~g~LiC~-~c~~~YPI~ 20 (53)
....+.|. .|..+|-.+
T Consensus 15 ~~~mI~Cd~~C~~WfH~~ 32 (52)
T 2kgg_A 15 KVDWVQCDGGCDEWFHQV 32 (52)
T ss_dssp TCCEEECTTTTCCEEETT
T ss_pred CCcEEEeCCCCCccCccc
Confidence 34578899 899888654
No 203
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=33.00 E-value=14 Score=16.46 Aligned_cols=15 Identities=13% Similarity=0.220 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emk_A 11 KPYECKECGKAFSQT 25 (46)
T ss_dssp CSCBCSSSCCBCSCH
T ss_pred CceECCCCCchhCCH
Confidence 347899999998644
No 204
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=32.96 E-value=28 Score=18.70 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=15.1
Q ss_pred cCCeEEcCCCCeeeeee-CCcc
Q 036116 4 ETNSLISDSIGVSFPIK-DGIP 24 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~-dGIP 24 (53)
.+..|.|..|.++|=.. =|+|
T Consensus 30 ~~~ll~CD~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 30 SNVILFCDMCNLAVHQECYGVP 51 (71)
T ss_dssp SSCEEECSSSCCEEEHHHHTCS
T ss_pred CCCEEECCCCCCccccccCCCC
Confidence 34689999999999554 3444
No 205
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=32.93 E-value=12 Score=22.60 Aligned_cols=14 Identities=7% Similarity=-0.235 Sum_probs=11.7
Q ss_pred CCeEEcCCCCeeee
Q 036116 5 TNSLISDSIGVSFP 18 (53)
Q Consensus 5 ~g~LiC~~c~~~YP 18 (53)
.+.++|..|+++|-
T Consensus 48 ekpfyC~~C~K~F~ 61 (124)
T 1zr9_A 48 GGLHRCLACARYFI 61 (124)
T ss_dssp GGCSEETTTTEECS
T ss_pred CcceEcccCcchhC
Confidence 45789999999985
No 206
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=32.93 E-value=13 Score=14.90 Aligned_cols=13 Identities=15% Similarity=0.286 Sum_probs=9.5
Q ss_pred EEcC--CCCeeeeee
Q 036116 8 LISD--SIGVSFPIK 20 (53)
Q Consensus 8 LiC~--~c~~~YPI~ 20 (53)
..|+ .|++.|.-.
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRS 17 (31)
T ss_dssp CBCCSTTCCCBCSSH
T ss_pred cCCcCCCCCcccCCH
Confidence 4687 899988643
No 207
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=32.84 E-value=20 Score=18.08 Aligned_cols=13 Identities=15% Similarity=0.059 Sum_probs=9.7
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...|+.|++.|.-
T Consensus 32 p~~C~~C~k~F~~ 44 (60)
T 4gzn_C 32 PRSCPECGKCFRD 44 (60)
T ss_dssp CEECTTTCCEESS
T ss_pred CeECCCCCCCcCC
Confidence 4678888888854
No 208
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=32.63 E-value=18 Score=22.17 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=11.1
Q ss_pred EEcCCCCeeeeee
Q 036116 8 LISDSIGVSFPIK 20 (53)
Q Consensus 8 LiC~~c~~~YPI~ 20 (53)
-.|+.||.+|-..
T Consensus 111 ~RCpeCG~~fkL~ 123 (129)
T 2y69_F 111 QRCPSCGTHYKLV 123 (129)
T ss_dssp EECTTTCCEEEEE
T ss_pred eeCCCCCeEEEEe
Confidence 4899999999765
No 209
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.58 E-value=14 Score=16.43 Aligned_cols=16 Identities=13% Similarity=0.034 Sum_probs=12.2
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2epz_A 11 KPFDCIDCGKAFSDHI 26 (46)
T ss_dssp CSBCCTTTCCCBSSHH
T ss_pred CCeECCCCCceeCCHH
Confidence 3578999999987543
No 210
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=32.04 E-value=21 Score=17.42 Aligned_cols=14 Identities=14% Similarity=0.178 Sum_probs=10.1
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
...|+.|++.|.-.
T Consensus 45 ~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 45 PYRCNICGAQFNRP 58 (74)
T ss_dssp SEECTTTCCEESCH
T ss_pred CEECCCCCchhCCH
Confidence 47788888887643
No 211
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.53 E-value=14 Score=16.36 Aligned_cols=16 Identities=13% Similarity=0.069 Sum_probs=12.1
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 11 KPYECIECGKAFIQNT 26 (47)
T ss_dssp CSBCCSSSCCCBSSHH
T ss_pred CCEECCccCchhCChH
Confidence 3578999999987543
No 212
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.36 E-value=15 Score=16.20 Aligned_cols=16 Identities=13% Similarity=0.264 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTS 26 (46)
T ss_dssp CTTCCTTTCCCCSSHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 3468999999987543
No 213
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=31.34 E-value=17 Score=18.45 Aligned_cols=22 Identities=9% Similarity=0.081 Sum_probs=15.6
Q ss_pred CeEEcCCCCeeeeeeCCccccC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL 27 (53)
+...||.|+..+...+=.|+..
T Consensus 52 ~~~~CP~Cr~~~~~~~l~~n~~ 73 (79)
T 2egp_A 52 GKSSCPVCGISYSFEHLQANQH 73 (79)
T ss_dssp CCCCCSSSCCCCCSSGGGTCSS
T ss_pred CCCcCCCCCCcCCHhhCCcCHH
Confidence 4788999999888755444433
No 214
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.26 E-value=13 Score=16.52 Aligned_cols=15 Identities=27% Similarity=0.273 Sum_probs=11.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 11 KPFKCDICGKSFCGR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCcCCchhCCH
Confidence 357899999998643
No 215
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.17 E-value=17 Score=16.07 Aligned_cols=15 Identities=20% Similarity=0.270 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 9 k~~~C~~C~k~f~~~ 23 (45)
T 2epq_A 9 KPYSCPVCGLRFKRK 23 (45)
T ss_dssp CSSEETTTTEECSCH
T ss_pred CCCcCCCCCcccCCH
Confidence 357899999998644
No 216
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=31.05 E-value=28 Score=19.23 Aligned_cols=16 Identities=0% Similarity=-0.097 Sum_probs=13.6
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
+..|.|..|.++|=..
T Consensus 31 ~~ll~CD~C~~~yH~~ 46 (88)
T 1wev_A 31 NQLVECQECHNLYHQD 46 (88)
T ss_dssp CCEEECSSSCCEEETT
T ss_pred CceEECCCCCCeEcCc
Confidence 4679999999999765
No 217
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=30.79 E-value=28 Score=22.14 Aligned_cols=17 Identities=6% Similarity=0.110 Sum_probs=13.8
Q ss_pred eEEcCCCCeeeeeeCCc
Q 036116 7 SLISDSIGVSFPIKDGI 23 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGI 23 (53)
.+.|..|+..|+..+.|
T Consensus 113 ~~~C~~C~~~~~~~~~~ 129 (235)
T 1s5p_A 113 KVRCSQSGQVLDWTGDV 129 (235)
T ss_dssp EEEETTTCCEEECCSCC
T ss_pred EEEeCCCCCcccchhhc
Confidence 57899999999987643
No 218
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.41 E-value=16 Score=16.23 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2ytq_A 11 KPYGCSECGKAFSSKS 26 (46)
T ss_dssp CSCBCSSSCCBCSCHH
T ss_pred CCcCCCccChhhCChH
Confidence 3478999999987543
No 219
>1qf8_A Casein kinase II; casein kinase beta subunit (1-182), Ser/Thr protein kinase, Zn finger, transferase; HET: MSE; 1.74A {Homo sapiens} SCOP: g.41.4.1 PDB: 3eed_A 1rqf_A
Probab=30.33 E-value=23 Score=22.69 Aligned_cols=16 Identities=13% Similarity=-0.052 Sum_probs=12.5
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
.=.|.||+|+-.|--+
T Consensus 132 ~VKlyCP~C~DvY~p~ 147 (182)
T 1qf8_A 132 MVKLYCPKCMDVYTPK 147 (182)
T ss_dssp BCEEECTTTCCEECCS
T ss_pred ceEEECCCccceeCCC
Confidence 3469999999998543
No 220
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=30.26 E-value=26 Score=17.00 Aligned_cols=12 Identities=17% Similarity=0.243 Sum_probs=8.2
Q ss_pred eEEcCCCCeeee
Q 036116 7 SLISDSIGVSFP 18 (53)
Q Consensus 7 ~LiC~~c~~~YP 18 (53)
...|+.|+..|.
T Consensus 57 ~~~C~~C~~~f~ 68 (82)
T 2kmk_A 57 PHKCQVCGKAFS 68 (82)
T ss_dssp CEECTTTSCEES
T ss_pred CCcCCCcchhhC
Confidence 467777777764
No 221
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=29.95 E-value=21 Score=17.70 Aligned_cols=11 Identities=0% Similarity=-0.151 Sum_probs=9.1
Q ss_pred EEcCCCCeeee
Q 036116 8 LISDSIGVSFP 18 (53)
Q Consensus 8 LiC~~c~~~YP 18 (53)
-.|++|++.|-
T Consensus 10 qhcrfckkkys 20 (37)
T 2elu_A 10 QHCRFCKKKYS 20 (37)
T ss_dssp CEETTTTEECS
T ss_pred HHHHHHHHHHH
Confidence 47999999884
No 222
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=29.95 E-value=34 Score=20.41 Aligned_cols=16 Identities=6% Similarity=-0.151 Sum_probs=11.2
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...+.|..|.+||-..
T Consensus 21 ~~mi~Cd~C~~WfH~~ 36 (174)
T 2ri7_A 21 KFYIGCDRCQNWYHGR 36 (174)
T ss_dssp SCEEECTTTCCEEEHH
T ss_pred CCEeECCCCCchhChh
Confidence 3467788888887554
No 223
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.80 E-value=17 Score=16.16 Aligned_cols=15 Identities=13% Similarity=0.084 Sum_probs=11.3
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 11 KPYKCMECGKAFGDN 25 (46)
T ss_dssp CSSSBTTTTBCCSSH
T ss_pred CCcCCCCCCchhCCH
Confidence 346899999998643
No 224
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=29.70 E-value=32 Score=18.74 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.8
Q ss_pred CCeEEcCCCCeeeeeeCCccccCCC
Q 036116 5 TNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
.+.|+||--+-.|-+++|-.+-.|.
T Consensus 56 ~~~i~Cp~Hg~~Fdl~~G~~~~~P~ 80 (106)
T 3dqy_A 56 GDIVECTLHFGKFCVRTGKVKALPA 80 (106)
T ss_dssp TTEEECTTTCCEEETTTCCEEETTC
T ss_pred CCEEECCCCCCEEeCCCCCEeCCCC
Confidence 5689999999999999997665553
No 225
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=29.45 E-value=15 Score=16.28 Aligned_cols=15 Identities=7% Similarity=0.120 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 11 KTWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCCSSSCCCCSSH
T ss_pred cCeECCCCCcccCCH
Confidence 347899999998654
No 226
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=29.09 E-value=25 Score=20.61 Aligned_cols=18 Identities=0% Similarity=-0.272 Sum_probs=14.8
Q ss_pred CCeEEcCCCCeeeeeeCC
Q 036116 5 TNSLISDSIGVSFPIKDG 22 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dG 22 (53)
...+.|+.|+..+++.+-
T Consensus 24 ~~~~~C~~C~y~~~~~~~ 41 (122)
T 1twf_I 24 RLLFECRTCSYVEEAGSP 41 (122)
T ss_dssp EEEEECSSSSCEEECSCS
T ss_pred CCEEECCcCCCeeecCcc
Confidence 357999999999998753
No 227
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=28.90 E-value=25 Score=22.33 Aligned_cols=13 Identities=0% Similarity=-0.266 Sum_probs=10.6
Q ss_pred CCeEEcCCCCeee
Q 036116 5 TNSLISDSIGVSF 17 (53)
Q Consensus 5 ~g~LiC~~c~~~Y 17 (53)
+.+|.|+.|+...
T Consensus 183 ~~~m~cp~cg~~E 195 (209)
T 2nn6_I 183 WCEMQCPKTHTKE 195 (209)
T ss_dssp TTEEECTTTTCCB
T ss_pred CCEEECCCCCCEE
Confidence 4789999998654
No 228
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=28.39 E-value=77 Score=19.11 Aligned_cols=26 Identities=27% Similarity=0.206 Sum_probs=19.7
Q ss_pred CeEEcCCCCeeeeeeCCccccCCCCC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLVPKDG 31 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL~~ea 31 (53)
+.+.|+.|+..+.-++|...+++...
T Consensus 17 ~~~~C~~~~~~~~~~~Gy~~~~~~~~ 42 (269)
T 1p91_A 17 NSYICPQRHQFDMAKEGYVNLLPVQH 42 (269)
T ss_dssp TEEECTTCCEEEBCTTSCEECSCSSS
T ss_pred CEEECCCCCcCCcCCCEEEEeecccc
Confidence 46799998866666899888887644
No 229
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=28.13 E-value=25 Score=18.74 Aligned_cols=11 Identities=18% Similarity=0.006 Sum_probs=8.5
Q ss_pred eEEcCCCCeee
Q 036116 7 SLISDSIGVSF 17 (53)
Q Consensus 7 ~LiC~~c~~~Y 17 (53)
..+|+.||-.|
T Consensus 36 ~~~C~~CGE~~ 46 (78)
T 3ga8_A 36 GLYCVHCEESI 46 (78)
T ss_dssp EEEETTTCCEE
T ss_pred eEECCCCCCEE
Confidence 56888888776
No 230
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.90 E-value=26 Score=18.75 Aligned_cols=12 Identities=8% Similarity=-0.128 Sum_probs=8.9
Q ss_pred CeEEcCCCCeee
Q 036116 6 NSLISDSIGVSF 17 (53)
Q Consensus 6 g~LiC~~c~~~Y 17 (53)
....|+.|++.|
T Consensus 33 ~~~~C~~C~k~F 44 (96)
T 2ctd_A 33 GSVSCPTCQAVG 44 (96)
T ss_dssp SCEECTTTCSCE
T ss_pred CCcCCCCCCCCc
Confidence 456788888887
No 231
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.71 E-value=18 Score=16.04 Aligned_cols=15 Identities=20% Similarity=0.204 Sum_probs=11.4
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....|+.|++.|.-.
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 11 KPYQCSECGKSFSGS 25 (46)
T ss_dssp CTTCCSSSCCCCSSH
T ss_pred CCeeCCCCCcccCCH
Confidence 346899999988643
No 232
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=27.53 E-value=30 Score=19.56 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=21.8
Q ss_pred cCCeEEcCCCCeeeeeeCCccccCCC
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
..+.|+||--+-.|-+++|-.+-.|.
T Consensus 66 ~~~~i~CP~Hg~~Fdl~tG~~~~~P~ 91 (121)
T 3gce_A 66 ESLEIECPLHVGRFDVRTGAPTALPC 91 (121)
T ss_dssp TTTEEECTTTCCEEETTTCCEEETTC
T ss_pred cCCEEEcCCCCCEEcCCCccEeCCCC
Confidence 45789999999999999998766554
No 233
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=27.43 E-value=32 Score=17.05 Aligned_cols=13 Identities=23% Similarity=0.337 Sum_probs=8.9
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
.+.|+.|+..|.-
T Consensus 62 ~~~C~~C~~~f~~ 74 (90)
T 1a1h_A 62 PFACDICGRKFAR 74 (90)
T ss_dssp CEECTTTCCEESS
T ss_pred CccCCCCCchhCC
Confidence 4677777777753
No 234
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=27.40 E-value=28 Score=17.64 Aligned_cols=18 Identities=6% Similarity=0.134 Sum_probs=14.9
Q ss_pred eEEcCCCCeeeeeeCCcc
Q 036116 7 SLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGIP 24 (53)
..+|+.||..|--..|-|
T Consensus 4 ~y~C~vCGyvyd~~~Gd~ 21 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDN 21 (46)
T ss_dssp CEEETTTCCEECGGGGTT
T ss_pred EEECCCCCeEEeCCcCCC
Confidence 468999999998777766
No 235
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.99 E-value=22 Score=14.20 Aligned_cols=13 Identities=15% Similarity=0.141 Sum_probs=9.8
Q ss_pred EEcC--CCCeeeeee
Q 036116 8 LISD--SIGVSFPIK 20 (53)
Q Consensus 8 LiC~--~c~~~YPI~ 20 (53)
..|. .|+..|.-.
T Consensus 4 ~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 4 YSCDHPGCDKAFVRN 18 (32)
T ss_dssp BCCCCTTCCCCBSSS
T ss_pred CcCcCCCCCCccCCH
Confidence 5688 899988643
No 236
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.82 E-value=44 Score=18.73 Aligned_cols=20 Identities=25% Similarity=0.165 Sum_probs=14.7
Q ss_pred CCeEEcCCCCeeeeee-CCcc
Q 036116 5 TNSLISDSIGVSFPIK-DGIP 24 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~-dGIP 24 (53)
...|.|..|.++|=+. =|++
T Consensus 40 ~~mi~Cd~C~~w~H~~C~~~~ 60 (98)
T 2lv9_A 40 GYMICCDKCSVWQHIDCMGID 60 (98)
T ss_dssp SCEEEBTTTCBEEETTTTTCC
T ss_pred CcEEEcCCCCCcCcCcCCCCC
Confidence 4568899999999776 3443
No 237
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.75 E-value=29 Score=17.07 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=11.7
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
....|+.|++.|.-..
T Consensus 45 ~~~~C~~C~~~f~~~~ 60 (77)
T 2cot_A 45 KPYKCDECGKAFIQRS 60 (77)
T ss_dssp CSEECSSSCCEESSHH
T ss_pred cCeeCCCCCCccCCHH
Confidence 3478999998886543
No 238
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=26.64 E-value=20 Score=27.17 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=16.1
Q ss_pred EEcCCCCeeeeeeCCccc
Q 036116 8 LISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPv 25 (53)
..|..||=.|-|...+|-
T Consensus 129 ~nCt~CGPR~tii~~lPY 146 (772)
T 4g9i_A 129 IVCTNCGPRFTIIEDLPY 146 (772)
T ss_dssp CCCTTSSCCGGGCCSSSC
T ss_pred ccCCCCCchhhhhhcCCC
Confidence 469999999999999985
No 239
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.50 E-value=53 Score=15.40 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=14.7
Q ss_pred CeEEcCCCCeeeeeeCCcc
Q 036116 6 NSLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIP 24 (53)
....|+.|+..|.-....-
T Consensus 17 ~~~~C~~C~k~f~~~~~l~ 35 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLS 35 (73)
T ss_dssp SEEECSSSCCEEECCCCCC
T ss_pred CCeeCCcccchhCCHHHhC
Confidence 4688999999998766543
No 240
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.41 E-value=32 Score=16.90 Aligned_cols=13 Identities=8% Similarity=0.079 Sum_probs=8.1
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...|+.|++.|.-
T Consensus 15 ~~~C~~C~~~f~~ 27 (86)
T 1x6h_A 15 PYACSHCDKTFRQ 27 (86)
T ss_dssp CEECSSSSCEESS
T ss_pred CCcCCCCCCccCC
Confidence 4566677666654
No 241
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.21 E-value=19 Score=18.96 Aligned_cols=12 Identities=8% Similarity=0.047 Sum_probs=6.2
Q ss_pred eEEcCCCCeeee
Q 036116 7 SLISDSIGVSFP 18 (53)
Q Consensus 7 ~LiC~~c~~~YP 18 (53)
.+.|+.|++.|.
T Consensus 24 ~~~C~~C~k~f~ 35 (98)
T 2gqj_A 24 EAVCPTCNVVTR 35 (98)
T ss_dssp CCCCTTTCCCCS
T ss_pred CcCCCCCCCChh
Confidence 345555555554
No 242
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=26.15 E-value=30 Score=18.82 Aligned_cols=17 Identities=6% Similarity=-0.027 Sum_probs=12.0
Q ss_pred eEEcCCCCeeeeeeCCc
Q 036116 7 SLISDSIGVSFPIKDGI 23 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGI 23 (53)
.+.|+.|+..|=+.=+.
T Consensus 43 ~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 43 EATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CEECTTTCCEECSSSCS
T ss_pred ceEeCCCCCccccccCC
Confidence 47888888888665444
No 243
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=25.74 E-value=35 Score=17.83 Aligned_cols=19 Identities=16% Similarity=0.020 Sum_probs=14.0
Q ss_pred CeEEcCCCCeeeeee-CCcc
Q 036116 6 NSLISDSIGVSFPIK-DGIP 24 (53)
Q Consensus 6 g~LiC~~c~~~YPI~-dGIP 24 (53)
..|.|..|..+|=.. =||+
T Consensus 32 ~mi~CD~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 32 PMIGCDDCDDWYHWPCVGIM 51 (75)
T ss_dssp CEEECSSSSSEEEHHHHTCS
T ss_pred CEEEcCCCCcccccccCCCC
Confidence 478999999999665 2444
No 244
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.52 E-value=21 Score=18.66 Aligned_cols=16 Identities=19% Similarity=0.127 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
.-..|..|++.|.-..
T Consensus 12 kpy~C~~CgK~F~~~s 27 (66)
T 2epp_A 12 GILPCGLCGKVFTDAN 27 (66)
T ss_dssp CCCCCTTTCCCCSCHH
T ss_pred cCcCCCCCCCccCCHH
Confidence 4578999999886543
No 245
>4dgl_A Casein kinase II subunit beta; protein kinase, transferase; 3.00A {Homo sapiens} PDB: 2r6m_A 1jwh_C 1ds5_E*
Probab=25.51 E-value=31 Score=22.77 Aligned_cols=16 Identities=13% Similarity=-0.029 Sum_probs=12.6
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
=.|.||+|+-.|--+.
T Consensus 133 VKlyCP~C~DvY~P~s 148 (215)
T 4dgl_A 133 VKLYCPKCMDVYTPKS 148 (215)
T ss_dssp EEEECTTTCCEECCSS
T ss_pred eeEeCCCcccccCCCc
Confidence 3799999998886543
No 246
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=25.21 E-value=53 Score=20.21 Aligned_cols=13 Identities=15% Similarity=0.084 Sum_probs=11.0
Q ss_pred CeEEcCCCCeeee
Q 036116 6 NSLISDSIGVSFP 18 (53)
Q Consensus 6 g~LiC~~c~~~YP 18 (53)
..-+|+.||..|.
T Consensus 137 ~~~~C~~CG~i~~ 149 (170)
T 3pwf_A 137 KVYICPICGYTAV 149 (170)
T ss_dssp CEEECTTTCCEEE
T ss_pred CeeEeCCCCCeeC
Confidence 4578999999997
No 247
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=25.06 E-value=32 Score=21.98 Aligned_cols=15 Identities=13% Similarity=-0.040 Sum_probs=12.9
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
-+|.|..|+++|...
T Consensus 19 ~mLqC~~C~qWFH~~ 33 (177)
T 3rsn_A 19 VELQCGICTKWFTAD 33 (177)
T ss_dssp CEEECTTTCCEEEGG
T ss_pred eeEeeccccceecHH
Confidence 489999999999865
No 248
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=24.84 E-value=43 Score=18.05 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=21.0
Q ss_pred cCCeEEcCCCCeeeeeeCCccccCCC
Q 036116 4 ETNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
..+.|+||--+-.|-+++|-.+-.|.
T Consensus 57 ~~~~i~Cp~Hg~~Fd~~~G~~~~~P~ 82 (103)
T 2qpz_A 57 EGREIECPLHQGRFDVCTGKALCAPV 82 (103)
T ss_dssp ETTEEECTTTTCEEETTTCCEEETTC
T ss_pred eCCEEECCCCCCEEeCCCCCEeCCCC
Confidence 34689999999999999997765543
No 249
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=24.81 E-value=37 Score=17.11 Aligned_cols=11 Identities=9% Similarity=0.178 Sum_probs=6.4
Q ss_pred EEcCCCCeeee
Q 036116 8 LISDSIGVSFP 18 (53)
Q Consensus 8 LiC~~c~~~YP 18 (53)
.+|..|+..|.
T Consensus 44 y~C~~Cg~~w~ 54 (57)
T 1qyp_A 44 YKCTKCGHTWR 54 (57)
T ss_dssp EEESSSCCEEE
T ss_pred EEcCCCCCEec
Confidence 45666666554
No 250
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=24.77 E-value=33 Score=21.29 Aligned_cols=13 Identities=8% Similarity=-0.008 Sum_probs=10.5
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
.|.|+-|+++||=
T Consensus 27 ~lr~pCC~k~y~C 39 (143)
T 2dkt_A 27 LLKAPCCDKLYTC 39 (143)
T ss_dssp EEEETTTTEEESS
T ss_pred eEECCCCCCccch
Confidence 5888888888874
No 251
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=24.53 E-value=47 Score=17.19 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=14.0
Q ss_pred eEEcCCCCeeeeeeCCcc
Q 036116 7 SLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGIP 24 (53)
..+|..||..|-=..|-|
T Consensus 3 ~y~C~~CGyvYd~~~Gdp 20 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLP 20 (55)
T ss_dssp EEEETTTCCEEETTTCBT
T ss_pred cEEeCCCCeEECCCcCCc
Confidence 578999999997665544
No 252
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=24.48 E-value=51 Score=16.73 Aligned_cols=13 Identities=8% Similarity=0.332 Sum_probs=10.2
Q ss_pred cCCeEEcCCCCee
Q 036116 4 ETNSLISDSIGVS 16 (53)
Q Consensus 4 ~~g~LiC~~c~~~ 16 (53)
..+.+.|..||..
T Consensus 3 ~~~~~~CE~CG~~ 15 (43)
T 2w0t_A 3 GSEPAVCEMCGIV 15 (43)
T ss_dssp SCCEEECTTTCCE
T ss_pred CCceehhhhhcCc
Confidence 3467999999964
No 253
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=24.39 E-value=11 Score=21.10 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=11.6
Q ss_pred cCCeEEcCCCCeeeeeeCCc
Q 036116 4 ETNSLISDSIGVSFPIKDGI 23 (53)
Q Consensus 4 ~~g~LiC~~c~~~YPI~dGI 23 (53)
.++.++|..|...+..++||
T Consensus 92 ~~~~~~C~~~~~~~~~~~g~ 111 (114)
T 1j2o_A 92 EDERLITRLENTQFDAANGI 111 (114)
T ss_dssp SSSCCCEEEECTTCCCTTSS
T ss_pred cCCEeecchhhhccccccCC
Confidence 34556666666666655554
No 254
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=24.32 E-value=20 Score=26.90 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=16.1
Q ss_pred EEcCCCCeeeeeeCCccc
Q 036116 8 LISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPv 25 (53)
..|..||=.|-|...+|-
T Consensus 40 ~nCt~CGPR~tii~~lPY 57 (657)
T 3ttc_A 40 INCTHCGPRFTIIRAMPY 57 (657)
T ss_dssp CCBTTBBCSGGGBSSSSC
T ss_pred ccCcCCCchHHhcccCCC
Confidence 469999999999999985
No 255
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.30 E-value=36 Score=17.11 Aligned_cols=15 Identities=0% Similarity=-0.203 Sum_probs=10.5
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
..+.|+.|+..|.-.
T Consensus 63 ~~~~C~~C~~~f~~~ 77 (96)
T 2dmd_A 63 RPFKCQICPYASRNS 77 (96)
T ss_dssp CCEECSSSSCEESSH
T ss_pred CCccCCCCCCccCCH
Confidence 347788888887644
No 256
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=24.23 E-value=46 Score=13.91 Aligned_cols=14 Identities=14% Similarity=0.197 Sum_probs=10.7
Q ss_pred CeEEcC--CCCeeeee
Q 036116 6 NSLISD--SIGVSFPI 19 (53)
Q Consensus 6 g~LiC~--~c~~~YPI 19 (53)
....|. .|++.|.-
T Consensus 7 k~~~C~~~~C~k~f~~ 22 (37)
T 1va1_A 7 KQHICHIQGCGKVYGK 22 (37)
T ss_dssp CCEECCSTTCCCEESC
T ss_pred CCCCCCCCCCCCccCC
Confidence 457898 59999864
No 257
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.17 E-value=46 Score=13.77 Aligned_cols=15 Identities=13% Similarity=0.352 Sum_probs=11.2
Q ss_pred CeEEcC--CCCeeeeee
Q 036116 6 NSLISD--SIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~--~c~~~YPI~ 20 (53)
....|. .|++.|.-.
T Consensus 5 k~~~C~~~~C~k~f~~~ 21 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNE 21 (38)
T ss_dssp CCEECCCTTTCCEESSH
T ss_pred cceECCCCCCCcccCCH
Confidence 457899 699998643
No 258
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.98 E-value=37 Score=17.64 Aligned_cols=16 Identities=13% Similarity=0.142 Sum_probs=11.6
Q ss_pred CeEEcCCCCeeeeeeC
Q 036116 6 NSLISDSIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~~c~~~YPI~d 21 (53)
..+.|+.|++.|.-..
T Consensus 64 ~~~~C~~C~~~f~~~~ 79 (110)
T 2csh_A 64 KPYECNICAKRFMWRD 79 (110)
T ss_dssp CCEECSSSCCEESCHH
T ss_pred CCeeCCCCcchhcCHH
Confidence 3578888888887543
No 259
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=23.85 E-value=17 Score=24.47 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=0.0
Q ss_pred eEEcCCCCeeeeee
Q 036116 7 SLISDSIGVSFPIK 20 (53)
Q Consensus 7 ~LiC~~c~~~YPI~ 20 (53)
++.|.+|+..|...
T Consensus 260 ev~C~FC~~~Y~F~ 273 (292)
T 1i7f_A 260 DMHCDYCGNHYLFN 273 (292)
T ss_dssp --------------
T ss_pred EEEeeCCCCEEEeC
Confidence 79999999999886
No 260
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=23.65 E-value=44 Score=17.25 Aligned_cols=12 Identities=8% Similarity=0.063 Sum_probs=7.6
Q ss_pred CeEEcCCCCeee
Q 036116 6 NSLISDSIGVSF 17 (53)
Q Consensus 6 g~LiC~~c~~~Y 17 (53)
+.+.|..|+..|
T Consensus 35 dr~~C~kCgyt~ 46 (55)
T 2k4x_A 35 DRYSCGRCGYTE 46 (55)
T ss_dssp SEEECTTTCCCE
T ss_pred CEEECCCCCCEE
Confidence 466677776654
No 261
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=23.59 E-value=41 Score=16.89 Aligned_cols=11 Identities=9% Similarity=-0.004 Sum_probs=5.6
Q ss_pred EEcCCCCeeee
Q 036116 8 LISDSIGVSFP 18 (53)
Q Consensus 8 LiC~~c~~~YP 18 (53)
..|+.|+..|.
T Consensus 4 ~~C~~C~k~f~ 14 (88)
T 1llm_C 4 FQCRICMRNFS 14 (88)
T ss_dssp EECTTTCCEES
T ss_pred CcCCCCCCccC
Confidence 44555555553
No 262
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.50 E-value=50 Score=15.77 Aligned_cols=12 Identities=8% Similarity=-0.081 Sum_probs=8.1
Q ss_pred eEEcCCCCeeee
Q 036116 7 SLISDSIGVSFP 18 (53)
Q Consensus 7 ~LiC~~c~~~YP 18 (53)
...|+.|+..|.
T Consensus 10 ~~~C~~C~k~f~ 21 (66)
T 2eod_A 10 TQPCTYCTKEFV 21 (66)
T ss_dssp EEECSSSCCEEE
T ss_pred CeeccccCCccC
Confidence 456777777776
No 263
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=23.38 E-value=59 Score=16.97 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=10.7
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
..+.|..|..||=..
T Consensus 30 ~mI~Cd~C~~W~H~~ 44 (72)
T 1wee_A 30 RMLACDGCGVWHHTR 44 (72)
T ss_dssp CEEECSSSCEEEETT
T ss_pred cEEECCCCCCccCCe
Confidence 367788888887654
No 264
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=23.11 E-value=52 Score=15.40 Aligned_cols=13 Identities=8% Similarity=0.051 Sum_probs=10.5
Q ss_pred eEEcCCCCeeeee
Q 036116 7 SLISDSIGVSFPI 19 (53)
Q Consensus 7 ~LiC~~c~~~YPI 19 (53)
...||.|+...|-
T Consensus 6 ~vqcpvcqq~mpa 18 (29)
T 3vhs_A 6 QVQCPVCQQMMPA 18 (29)
T ss_dssp EEECTTTCCEEEG
T ss_pred eeeChHHHHhCcH
Confidence 5789999988763
No 265
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=22.91 E-value=45 Score=18.36 Aligned_cols=15 Identities=7% Similarity=-0.013 Sum_probs=12.0
Q ss_pred CeEEcCCCCeeeeee
Q 036116 6 NSLISDSIGVSFPIK 20 (53)
Q Consensus 6 g~LiC~~c~~~YPI~ 20 (53)
....||.|++.+.-+
T Consensus 8 ~~~~CP~Cgkp~~W~ 22 (68)
T 1lv3_A 8 ITVNCPTCGKTVVWG 22 (68)
T ss_dssp CEEECTTTCCEEECS
T ss_pred CcCcCCCCCCccccc
Confidence 457899999998754
No 266
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=22.78 E-value=42 Score=16.96 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=13.0
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|=+.
T Consensus 15 g~ll~Cd~C~~~fH~~ 30 (60)
T 2puy_A 15 GQLLMCDTCSRVYHLD 30 (60)
T ss_dssp SSCEECSSSSCEECGG
T ss_pred CcEEEcCCCCcCEECC
Confidence 3578999999999664
No 267
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=22.75 E-value=22 Score=27.01 Aligned_cols=18 Identities=28% Similarity=0.488 Sum_probs=16.1
Q ss_pred EEcCCCCeeeeeeCCccc
Q 036116 8 LISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPv 25 (53)
..|..||=.|-|...+|-
T Consensus 134 ~nCt~CGPR~tii~~lPY 151 (761)
T 3vth_A 134 INCTNCGPRFSIIEDIPY 151 (761)
T ss_dssp CCBTTBBCSGGGBCSSSC
T ss_pred ccCCCCCcchhhhccCCC
Confidence 469999999999999995
No 268
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=22.69 E-value=33 Score=17.41 Aligned_cols=22 Identities=9% Similarity=-0.029 Sum_probs=14.5
Q ss_pred CeEEcCCCCeeeeeeCCccccC
Q 036116 6 NSLISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvLL 27 (53)
+...||.|+..+...+=+|+..
T Consensus 42 ~~~~CP~C~~~~~~~~l~~n~~ 63 (78)
T 1t1h_A 42 GHKTCPKSQETLLHAGLTPNYV 63 (78)
T ss_dssp TCCBCTTTCCBCSSCCCEECTT
T ss_pred CcCCCCCCcCCCChhhCccCHH
Confidence 4567888888777665455443
No 269
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=22.65 E-value=37 Score=17.95 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=12.8
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|=..
T Consensus 22 ~~ll~Cd~C~~~~H~~ 37 (66)
T 2lri_C 22 TDVLRCTHCAAAFHWR 37 (66)
T ss_dssp TTCEECSSSCCEECHH
T ss_pred CeEEECCCCCCceecc
Confidence 3578999999999654
No 270
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.41 E-value=30 Score=18.71 Aligned_cols=14 Identities=14% Similarity=0.256 Sum_probs=8.3
Q ss_pred EEcCCCCeeeeeeC
Q 036116 8 LISDSIGVSFPIKD 21 (53)
Q Consensus 8 LiC~~c~~~YPI~d 21 (53)
.+|..|+..+.|+.
T Consensus 22 Y~C~~Cg~~~~l~~ 35 (63)
T 3h0g_L 22 YLCADCGARNTIQA 35 (63)
T ss_dssp CBCSSSCCBCCCCS
T ss_pred EECCCCCCeeecCC
Confidence 45666666666553
No 271
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=22.40 E-value=52 Score=16.81 Aligned_cols=19 Identities=21% Similarity=0.344 Sum_probs=14.2
Q ss_pred eEEcCCCCeeeeeeCCccc
Q 036116 7 SLISDSIGVSFPIKDGIPS 25 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGIPv 25 (53)
..+|..||..|-=..|-|.
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~ 20 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPD 20 (52)
T ss_dssp EEEESSSSCEEETTTCBGG
T ss_pred cEEeCCCCeEECCCcCCcc
Confidence 4689999999976655543
No 272
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=22.22 E-value=36 Score=20.86 Aligned_cols=13 Identities=15% Similarity=-0.013 Sum_probs=10.5
Q ss_pred CCeEEcCCCCeee
Q 036116 5 TNSLISDSIGVSF 17 (53)
Q Consensus 5 ~g~LiC~~c~~~Y 17 (53)
.++|.||.|+..-
T Consensus 154 ~~~~~cp~~g~~e 166 (179)
T 3m7n_A 154 GDILKCPECGRVE 166 (179)
T ss_dssp SSSEECSSSCCEE
T ss_pred CCEEECCCCCCEE
Confidence 4789999998754
No 273
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=22.20 E-value=24 Score=19.32 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=14.3
Q ss_pred EEcCCCCeeeeeeCCccccC
Q 036116 8 LISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIPvLL 27 (53)
-.||.|+..+.-.+=+|+.|
T Consensus 114 ~~CP~Cr~~~~~~~~~~~~~ 133 (133)
T 4ap4_A 114 NTCPTCRKKINHKRYHPIYI 133 (133)
T ss_dssp SBCTTTCCBCCGGGEEEECC
T ss_pred CCCCCCCCcCChhcceeeeC
Confidence 36888888887777666543
No 274
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.03 E-value=34 Score=17.24 Aligned_cols=17 Identities=0% Similarity=-0.091 Sum_probs=10.2
Q ss_pred EEcCCCCeeeeeeCCcc
Q 036116 8 LISDSIGVSFPIKDGIP 24 (53)
Q Consensus 8 LiC~~c~~~YPI~dGIP 24 (53)
..||.|+..+...+-++
T Consensus 51 ~~CP~Cr~~~~~~~~~~ 67 (72)
T 2djb_A 51 NRCPKCNIVVHQTQPLS 67 (72)
T ss_dssp SSCTTTCCCCCSSCSCC
T ss_pred CcCCCcCcccCcccccc
Confidence 35777777666555444
No 275
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=21.88 E-value=59 Score=18.31 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=14.9
Q ss_pred CeEEcCCCCeeeeeeCCcc
Q 036116 6 NSLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIP 24 (53)
...+|..||..|.=..|-|
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp 44 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWP 44 (81)
T ss_dssp CEEEETTTCCEEETTTCBT
T ss_pred ceEEeCCCCEEEcCCcCCc
Confidence 5789999999998655544
No 276
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=21.73 E-value=37 Score=18.26 Aligned_cols=12 Identities=0% Similarity=0.086 Sum_probs=9.0
Q ss_pred CeEEcCCCCeee
Q 036116 6 NSLISDSIGVSF 17 (53)
Q Consensus 6 g~LiC~~c~~~Y 17 (53)
..-.||.|+..|
T Consensus 25 akY~CPrC~~rY 36 (59)
T 1x4s_A 25 ARYTCPRCNAPY 36 (59)
T ss_dssp ECEECTTTCCEE
T ss_pred ccccCcCCCCCc
Confidence 456788888776
No 277
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=21.62 E-value=64 Score=17.47 Aligned_cols=20 Identities=10% Similarity=0.170 Sum_probs=14.5
Q ss_pred CCeEEcCCCCeeeeeeCCcc
Q 036116 5 TNSLISDSIGVSFPIKDGIP 24 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIP 24 (53)
....+|..|+..|.=..|-|
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp 24 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDK 24 (70)
T ss_dssp SSCEEETTTCCEECTTTCCT
T ss_pred CceEEeCCCCEEEcCCCCCc
Confidence 45688999999987555444
No 278
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=21.62 E-value=17 Score=21.08 Aligned_cols=11 Identities=9% Similarity=-0.040 Sum_probs=9.2
Q ss_pred cCCeEEcCCCC
Q 036116 4 ETNSLISDSIG 14 (53)
Q Consensus 4 ~~g~LiC~~c~ 14 (53)
.+|.++|+.|+
T Consensus 166 ~~g~~~c~~c~ 176 (184)
T 1pvm_A 166 EKGEIKVFRCS 176 (184)
T ss_dssp TTSCEEEEEES
T ss_pred ECCEEEccccC
Confidence 46889999996
No 279
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=21.62 E-value=51 Score=16.85 Aligned_cols=16 Identities=6% Similarity=0.233 Sum_probs=12.4
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|-..
T Consensus 21 g~ll~CD~C~~~fH~~ 36 (61)
T 2l5u_A 21 GEIILCDTCPRAYHMV 36 (61)
T ss_dssp SSEEECSSSSCEEEHH
T ss_pred CcEEECCCCChhhhhh
Confidence 3578899999999554
No 280
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=21.42 E-value=27 Score=21.09 Aligned_cols=17 Identities=0% Similarity=-0.171 Sum_probs=14.8
Q ss_pred eEEcCCCCeeeeeeCCc
Q 036116 7 SLISDSIGVSFPIKDGI 23 (53)
Q Consensus 7 ~LiC~~c~~~YPI~dGI 23 (53)
.+.|+.|+..++|.+.+
T Consensus 46 ~~~CrtCgY~~~~~~~~ 62 (133)
T 3qt1_I 46 LFECRTCSYVEEAGSPL 62 (133)
T ss_dssp CCBCSSSCCBCCCSCSE
T ss_pred EEECCCCCCcEEcCCce
Confidence 69999999999988764
No 281
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=21.41 E-value=42 Score=21.57 Aligned_cols=15 Identities=7% Similarity=-0.011 Sum_probs=12.8
Q ss_pred eEEcCCCCeeeeeeC
Q 036116 7 SLISDSIGVSFPIKD 21 (53)
Q Consensus 7 ~LiC~~c~~~YPI~d 21 (53)
.+.|..|+..|+..+
T Consensus 123 ~~~C~~C~~~~~~~~ 137 (253)
T 1ma3_A 123 KLDCLDCHETYDWSE 137 (253)
T ss_dssp EEEETTTCCEEEGGG
T ss_pred eeeeCCCCCcCcHHH
Confidence 578999999998765
No 282
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=21.39 E-value=45 Score=22.26 Aligned_cols=15 Identities=0% Similarity=0.000 Sum_probs=12.9
Q ss_pred eEEcCCCCeeeeeeC
Q 036116 7 SLISDSIGVSFPIKD 21 (53)
Q Consensus 7 ~LiC~~c~~~YPI~d 21 (53)
.+.|..|+..|+..+
T Consensus 154 ~~~C~~C~~~~~~~~ 168 (290)
T 3u31_A 154 EAVCCTCNKIVKLNK 168 (290)
T ss_dssp EEEETTTCCEEECCT
T ss_pred cceeCCCCCcCChhH
Confidence 579999999999765
No 283
>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1
Probab=21.37 E-value=43 Score=19.18 Aligned_cols=21 Identities=10% Similarity=-0.095 Sum_probs=16.0
Q ss_pred CeEEcCCCCeeeeeeCCcccc
Q 036116 6 NSLISDSIGVSFPIKDGIPSL 26 (53)
Q Consensus 6 g~LiC~~c~~~YPI~dGIPvL 26 (53)
-.++|+.|+..|-..-..+.|
T Consensus 44 ~~i~C~VCr~tFm~t~~~~~L 64 (86)
T 1wvk_A 44 MSIQCKVCMQTFICTTSEVKC 64 (86)
T ss_dssp CCEEETTTTEEECCSSCSHHH
T ss_pred hCCCChHhHhhHHhcCChHHH
Confidence 358999999999776665554
No 284
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.23 E-value=48 Score=17.26 Aligned_cols=14 Identities=7% Similarity=0.048 Sum_probs=8.8
Q ss_pred CeEEcCCCCeeeee
Q 036116 6 NSLISDSIGVSFPI 19 (53)
Q Consensus 6 g~LiC~~c~~~YPI 19 (53)
....|+.|+..|.-
T Consensus 65 ~~~~C~~C~~~f~~ 78 (124)
T 2dlq_A 65 QVFTCSVCQETFRR 78 (124)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCCCCCccCC
Confidence 34667777776653
No 285
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=21.19 E-value=55 Score=17.79 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=20.4
Q ss_pred CCeEEcCCCCeeeeeeCCccccCCC
Q 036116 5 TNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
.+.|+||--+-.|-+++|-.+-.|.
T Consensus 59 ~~~i~Cp~Hg~~Fdl~tG~~~~~P~ 83 (108)
T 2i7f_A 59 GTIIECPFHGGSFDIATGAAKAFPC 83 (108)
T ss_dssp TTEEECSSTTCEEETTTCCBCSTTC
T ss_pred CCEEEcCCCCCEEeCCCcCEeCCCC
Confidence 4689999999999999997655443
No 286
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.11 E-value=61 Score=14.44 Aligned_cols=16 Identities=6% Similarity=-0.006 Sum_probs=11.7
Q ss_pred CeEEcC--CCCeeeeeeC
Q 036116 6 NSLISD--SIGVSFPIKD 21 (53)
Q Consensus 6 g~LiC~--~c~~~YPI~d 21 (53)
....|+ .|++.|.-..
T Consensus 17 k~~~C~~~~C~k~F~~~~ 34 (47)
T 1ncs_A 17 KTFECLFPGCTKTFKRRY 34 (47)
T ss_dssp TEEECCCTTCCCEECSSS
T ss_pred CCeECCCCCCCCccCCHH
Confidence 457895 7999997543
No 287
>1ci3_M Protein (cytochrome F); electron transfer protein, complex subunit, electron transpo; HET: HEM; 1.90A {Phormidium laminosum} SCOP: b.2.6.1 b.84.2.2 PDB: 1tu2_B*
Probab=20.83 E-value=20 Score=24.44 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=17.4
Q ss_pred ccCCeEEcCCCCee-eeeeCCcccc
Q 036116 3 EETNSLISDSIGVS-FPIKDGIPSL 26 (53)
Q Consensus 3 ~~~g~LiC~~c~~~-YPI~dGIPvL 26 (53)
+..|.++|-.|+++ .||+=-+|.=
T Consensus 14 EAtGrIVCANCHLa~KpveiEvPQs 38 (249)
T 1ci3_M 14 EATGRIVCANCHLAAKPAEIEVPQA 38 (249)
T ss_dssp CTTSCBGGGGTCCSBCCCEEECCSE
T ss_pred hhcCcEEeeccccccCceeeeeccc
Confidence 46799999999875 5666555543
No 288
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.69 E-value=43 Score=16.73 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=12.9
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|-+.
T Consensus 19 g~ll~Cd~C~~~~H~~ 34 (56)
T 2yql_A 19 GQLLMCDTCSRVYHLD 34 (56)
T ss_dssp SCCEECSSSSCEECSS
T ss_pred CeEEEcCCCCcceECc
Confidence 3568999999999665
No 289
>1hcz_A Cytochrome F; electron transport, photosynthesis, cytochrome B6F complex, chloroplast transmembrane; HET: HEM; 1.96A {Brassica rapa} SCOP: b.2.6.1 b.84.2.2 PDB: 1tkw_B* 1ctm_A* 2pcf_B*
Probab=20.67 E-value=20 Score=24.45 Aligned_cols=24 Identities=17% Similarity=0.367 Sum_probs=17.4
Q ss_pred ccCCeEEcCCCCee-eeeeCCcccc
Q 036116 3 EETNSLISDSIGVS-FPIKDGIPSL 26 (53)
Q Consensus 3 ~~~g~LiC~~c~~~-YPI~dGIPvL 26 (53)
+..|.++|-.|+++ .||+=-+|.=
T Consensus 14 EAtGrIVCANCHLA~KpveiEvPQs 38 (252)
T 1hcz_A 14 EATGRIVCANCHLASKPVDIEVPQA 38 (252)
T ss_dssp CTTSCBGGGGTCCSBCCCEEECCSE
T ss_pred hhcCcEEeeccccccCceeeeeccc
Confidence 46799999999875 5666555543
No 290
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=20.56 E-value=45 Score=17.25 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=12.7
Q ss_pred CCeEEcCCCCeeeeee
Q 036116 5 TNSLISDSIGVSFPIK 20 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~ 20 (53)
...|.|..|.++|-..
T Consensus 18 g~ll~CD~C~~~fH~~ 33 (66)
T 1xwh_A 18 GELICCDGCPRAFHLA 33 (66)
T ss_dssp SSCEECSSCCCEECTT
T ss_pred CCEEEcCCCChhhccc
Confidence 3578999999999654
No 291
>1e2w_A Cytochrome F; electron transport proteins, internal water chain, photosynthetic function impaired; HET: HEC; 1.6A {Chlamydomonas reinhardtii} SCOP: b.2.6.1 b.84.2.2 PDB: 1cfm_A* 1ewh_A* 1e2v_A* 1e2z_A*
Probab=20.50 E-value=20 Score=24.41 Aligned_cols=24 Identities=8% Similarity=0.248 Sum_probs=17.5
Q ss_pred ccCCeEEcCCCCee-eeeeCCcccc
Q 036116 3 EETNSLISDSIGVS-FPIKDGIPSL 26 (53)
Q Consensus 3 ~~~g~LiC~~c~~~-YPI~dGIPvL 26 (53)
+..|.++|-.|+++ .||+=-+|.=
T Consensus 14 EAtGrIVCANCHLA~KpveiEvPQs 38 (251)
T 1e2w_A 14 EANGRIVCANCHLAQKAVEIEVPQA 38 (251)
T ss_dssp CTTSCBGGGGTCCSBCCCEEECCSE
T ss_pred hhcCcEEeeccccccCceeeeeccc
Confidence 46799999999875 5666556543
No 292
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=20.22 E-value=31 Score=23.14 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=10.2
Q ss_pred eCCccccCCCCCc
Q 036116 20 KDGIPSLVPKDGK 32 (53)
Q Consensus 20 ~dGIPvLL~~ear 32 (53)
==|||+|+|.|-.
T Consensus 403 ppgip~~~pge~i 415 (446)
T 2x3l_A 403 PPGIPIIFKGETI 415 (446)
T ss_dssp TTCSCSBCTTBBC
T ss_pred CCCCeEecCcCcc
Confidence 3699999998743
No 293
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=20.21 E-value=35 Score=22.05 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=14.6
Q ss_pred CCeEEcCCCCeeeeeeCCccccC
Q 036116 5 TNSLISDSIGVSFPIKDGIPSLV 27 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIPvLL 27 (53)
.+...||.|+..||-. +|-+-
T Consensus 215 ~~~~~CP~C~~~W~~~--~~~~~ 235 (238)
T 3nw0_A 215 NAEPRCPHCNDYWPHE--IPKVF 235 (238)
T ss_dssp CSSCBCTTTCCBCCSC--CCCCC
T ss_pred CCCCCCCCCCCCCCCC--CCCCC
Confidence 4567899999987654 55543
No 294
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=20.11 E-value=34 Score=17.60 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=6.5
Q ss_pred eEEcCCCCeeee
Q 036116 7 SLISDSIGVSFP 18 (53)
Q Consensus 7 ~LiC~~c~~~YP 18 (53)
.+.|+.|+..|.
T Consensus 17 ~~~C~~C~~~f~ 28 (106)
T 2ee8_A 17 EFICKFCGRHFT 28 (106)
T ss_dssp CCBCSSSCCBCS
T ss_pred CeECCCCCCccC
Confidence 345566655554
No 295
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=20.08 E-value=62 Score=17.99 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=20.5
Q ss_pred CCeEEcCCCCeeeeeeCCccccCCC
Q 036116 5 TNSLISDSIGVSFPIKDGIPSLVPK 29 (53)
Q Consensus 5 ~g~LiC~~c~~~YPI~dGIPvLL~~ 29 (53)
.+.|+||--+-.|-+++|-.+-.|.
T Consensus 60 ~~~i~CP~Hg~~Fdl~tG~~~~~P~ 84 (115)
T 2de6_D 60 GDVIECPFHGGAFNVCTGMPASSPC 84 (115)
T ss_dssp TTEEECTTTCCEEETTTCCEEETTC
T ss_pred CCEEECCCCCCEEcCCCcCEeCCCC
Confidence 4689999999999999997665553
Done!