Query 036117
Match_columns 641
No_of_seqs 464 out of 4181
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 16:15:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036117.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036117hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.2E-36 1.6E-40 301.0 18.0 291 18-339 2-302 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.5E-30 3.2E-34 255.0 19.3 253 367-628 52-310 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 6.6E-26 4.8E-30 231.9 34.0 209 389-621 175-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.7E-25 1.2E-29 228.9 34.9 187 389-597 197-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 4E-23 2.9E-27 203.6 29.7 272 90-402 12-285 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 8.2E-23 6E-27 201.4 29.8 247 304-600 31-285 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 5.4E-23 4E-27 200.2 20.3 238 389-633 32-270 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 4.4E-22 3.2E-26 193.7 22.3 227 393-628 15-242 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.5E-21 2.5E-25 185.1 20.8 200 388-600 9-208 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.8 2.9E-20 2.1E-24 178.6 21.4 193 372-577 17-209 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 1.8E-17 1.3E-21 166.3 32.3 97 89-200 39-136 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 4E-16 2.9E-20 156.2 37.4 183 385-605 158-341 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 9.1E-21 6.6E-25 198.0 -1.0 109 185-293 3-125 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 3.6E-20 2.6E-24 193.4 -1.8 385 232-631 2-446 (460)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 4.9E-17 3.5E-21 151.8 17.1 186 388-619 40-225 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 8.4E-17 6.1E-21 150.2 17.8 81 85-171 38-118 (227)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.7 6.3E-16 4.6E-20 140.7 17.5 148 86-245 38-185 (199)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 5.7E-16 4.1E-20 142.3 17.0 164 111-288 45-208 (210)
19 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 8.6E-17 6.3E-21 145.6 11.2 173 439-624 10-183 (192)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 3.5E-16 2.6E-20 147.7 15.3 181 390-600 30-214 (242)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 4.6E-16 3.4E-20 146.8 15.2 106 91-199 11-118 (242)
22 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 8E-16 5.8E-20 141.2 16.0 121 489-619 88-208 (210)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.4E-15 1E-19 138.4 16.8 142 487-640 58-199 (199)
24 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 1.7E-16 1.3E-20 143.6 10.7 172 416-600 11-183 (192)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 9.9E-16 7.2E-20 147.7 8.7 235 391-635 25-270 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.6 4.1E-15 3E-19 143.3 12.3 215 386-609 43-268 (284)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 1.5E-15 1.1E-19 151.3 5.3 256 344-625 23-316 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 8.7E-15 6.3E-19 127.5 8.5 127 487-617 14-145 (162)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1E-14 7.3E-19 127.1 8.0 113 83-198 13-126 (162)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 7.7E-15 5.6E-19 146.1 6.7 249 324-600 27-315 (344)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.5 2.3E-13 1.7E-17 112.3 11.9 79 91-174 1-79 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.4 3E-13 2.2E-17 111.7 12.2 101 115-220 1-103 (124)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 5.7E-14 4.2E-18 126.8 -3.6 144 468-617 24-180 (198)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 1.4E-11 1E-15 105.9 11.5 144 490-635 7-152 (156)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.9E-11 1.4E-15 105.2 10.4 103 116-219 12-115 (156)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 3.2E-13 2.3E-17 121.8 -2.4 109 510-624 43-153 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 1E-08 7.3E-13 88.4 -0.4 82 536-617 62-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.3 4.7E-08 3.5E-12 84.0 0.1 84 510-593 60-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 6.1E-06 4.5E-10 70.8 5.2 109 514-622 14-142 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 1.7E-05 1.2E-09 67.9 4.7 13 585-597 129-141 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.4 4.1E-05 3E-09 65.4 3.9 112 512-623 14-144 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 3.4E-05 2.5E-09 66.0 -0.4 64 86-149 15-87 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=2.2e-36 Score=301.05 Aligned_cols=291 Identities=26% Similarity=0.444 Sum_probs=197.8
Q ss_pred cCcHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCCcc--ccceeeCCC---CCEEEEEcCCCCCccc--cCCcCCCCCCC
Q 036117 18 ISAQKEAKALLNWKSSLVSSS-LPSWTAINSNSGPCN--WNGIQCNEV---GSISEINLANSGLDGT--LDGFDFSAFPN 89 (641)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~~~~-~~~W~~~~~~~~~c~--~~gv~c~~~---~~v~~l~l~~~~~~~~--~~~~~~~~l~~ 89 (641)
-|.++|++||++||+++..+. +++|... +|||. |.||.|+.. +||++|+|+++++.|. +| ..++++++
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~---~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp-~~l~~L~~ 77 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPT---TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTT---SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGGGGCTT
T ss_pred CCCHHHHHHHHHHHHHCCCCCcCCCCCCC---CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCC-hHHhcCcc
Confidence 488999999999999997665 7899754 79994 999999863 4799999999888763 45 66777777
Q ss_pred CCEEECCC-CCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEEEec
Q 036117 90 LTALNLNM-NNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLLRIG 168 (641)
Q Consensus 90 L~~L~L~~-n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~ 168 (641)
|++|+|++ |.+.|.+|..++++++|++|++++|++.+..+..+..+.+|+++++++|.+.+.+|..+.+++++++++++
T Consensus 78 L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~ 157 (313)
T d1ogqa_ 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecc
Confidence 77777775 66777777777777777777777777776666667777777777777777766677777777777777776
Q ss_pred cccCCCCCCcccCCCCCCCEEEcCCCCCCCCchhhcCCCCC-cEEEeeCCcCCCCCChhhhcCCCCCcEEeccCCccccc
Q 036117 169 ANYLEDPDPVKFKGMASLTDLWLDYNLLEKFPSFIAECSKL-MFLDLSDNLIMGHIPIEQLTHLENLEYLNLTKNSFEGE 247 (641)
Q Consensus 169 ~n~~~~~~~~~l~~l~~L~~L~l~~~~~~~l~~~l~~~~~L-~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~ 247 (641)
+|.+.+.. |..+..+.++ +.+++++|.+.+..+.. +..+.. ..++++.+...+.
T Consensus 158 ~n~l~~~i-----------------------p~~~~~l~~l~~~l~~~~n~l~~~~~~~-~~~l~~-~~l~l~~~~~~~~ 212 (313)
T d1ogqa_ 158 GNRISGAI-----------------------PDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNL-AFVDLSRNMLEGD 212 (313)
T ss_dssp SSCCEEEC-----------------------CGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCCC-SEEECCSSEEEEC
T ss_pred cccccccc-----------------------cccccccccccccccccccccccccccc-cccccc-ccccccccccccc
Confidence 66665444 4444444443 55555555555444432 233332 3566666666666
Q ss_pred CCcccCCCCCCCEEEcCCCcCCccCCcccCCCCcccEeeeecccccccCccccCCCCCCCeeeccCccCCCCCCcCCCCC
Q 036117 248 IPREIKTFPKLRHLKLGQNKLTGTIPDEIGLLSNLEILEFHENLFHGLIPSSLGNLRRLQRLNLKSAGLNSSIPKELGFC 327 (641)
Q Consensus 248 ~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~ 327 (641)
+|..+..+++++.+++.++.+.+.++ .+..+++|+.|++++|++++.+|..+.++++|++|++++|+++|.+|. ++.+
T Consensus 213 ~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L 290 (313)
T d1ogqa_ 213 ASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNL 290 (313)
T ss_dssp CGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTG
T ss_pred cccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccC
Confidence 66666666666666666666664433 355666666666666666666666666666666666666666665553 4556
Q ss_pred CCCCEEEccCcc
Q 036117 328 ANLTFLELSINN 339 (641)
Q Consensus 328 ~~L~~L~l~~n~ 339 (641)
++|+.+++++|+
T Consensus 291 ~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 291 QRFDVSAYANNK 302 (313)
T ss_dssp GGSCGGGTCSSS
T ss_pred CCCCHHHhCCCc
Confidence 666666666665
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=4.5e-30 Score=255.05 Aligned_cols=253 Identities=32% Similarity=0.480 Sum_probs=203.6
Q ss_pred cceeecccccccc--cCCcCCCCCCCCCEEEccC-CcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEE
Q 036117 367 IISLQLQMNDLSG--KLPPEIGLLPKLEYLYLFD-NKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLS 443 (641)
Q Consensus 367 l~~l~l~~~~l~~--~~~~~l~~~~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 443 (641)
++.++++++.+.| .+|+.++.+++|++|++++ |+++|.+|..++++++|++|++++|.+.+..+..+..+++|++++
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~ 131 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccc
Confidence 3344455555554 3667777777888888875 677777888888888888888888888877777777888888888
Q ss_pred ccCCcCcccCCcchhcCCCCCCCCCccEEEccCCcccccCCccccCCCCC-ceEeccCCcccCCCccccccCCCCcEEEC
Q 036117 444 LSSNQLTGTLPPEIGNSKSDFGPRFLRNVSFSYNNFSGKLPPGICRGGNL-IYLTANVNKLVGPIPESLWNCTGLTRVRL 522 (641)
Q Consensus 444 ls~n~l~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~L-~~L~l~~n~~~~~~~~~l~~~~~L~~L~l 522 (641)
+++|.+.+.+|..+..++ .++.+++++|.+.+.+|..+..+..+ +.+++++|++.+..|..+.++..+ .+++
T Consensus 132 l~~N~~~~~~p~~l~~l~------~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l 204 (313)
T d1ogqa_ 132 FSYNALSGTLPPSISSLP------NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDL 204 (313)
T ss_dssp CCSSEEESCCCGGGGGCT------TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEEC
T ss_pred cccccccccCchhhccCc------ccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 888888878888887777 78888888888888888887777665 778888888888888777776544 7888
Q ss_pred CCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCccc
Q 036117 523 EQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGK 602 (641)
Q Consensus 523 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 602 (641)
+++...+.+|..++.++.++.+++++|.+.+.++ .++.+++|+.|++++|+++|.+|..++++++|++|+|++|+++|.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~ 283 (313)
T d1ogqa_ 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccccc
Confidence 8888888888888889999999999999887655 577888999999999999999999999999999999999999998
Q ss_pred CCccccCCCCCCEEeCcCCC-Cccc-Cc
Q 036117 603 IPAQLFRSSFLIRLNLRRNQ-LSDK-IP 628 (641)
Q Consensus 603 ip~~l~~~~~L~~l~l~~n~-l~~~-~p 628 (641)
+|. +.++++|+.+++++|+ ++|. +|
T Consensus 284 iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 284 IPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp CCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred CCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 985 5778889999999997 5664 55
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=6.6e-26 Score=231.93 Aligned_cols=209 Identities=26% Similarity=0.327 Sum_probs=132.0
Q ss_pred CCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCCC
Q 036117 389 PKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPRF 468 (641)
Q Consensus 389 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~ 468 (641)
+.........|... ....+..+++++.+++++|.+++..+ +..+++|+++++++|.+++ + +.+..+. +
T Consensus 175 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~------~ 242 (384)
T d2omza2 175 TTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLT------N 242 (384)
T ss_dssp TTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCT------T
T ss_pred cccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhccc------c
Confidence 33444444444332 22334556666666666666654322 3445666666666666652 2 2344444 6
Q ss_pred ccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCC
Q 036117 469 LRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGD 548 (641)
Q Consensus 469 L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 548 (641)
|+.+++++|.+++.. .+..++.|+.++++++++.+.. .+..++.++.+.+++|.+.+ ...+..+++++.|++++
T Consensus 243 L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~ 316 (384)
T d2omza2 243 LTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 316 (384)
T ss_dssp CSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCS
T ss_pred cchhccccCccCCCC--cccccccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCC
Confidence 667777766665422 2556677777777777766432 25667777777777777764 23456677788888888
Q ss_pred CcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCcCC
Q 036117 549 NQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLRRN 621 (641)
Q Consensus 549 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~~n 621 (641)
|++++.. .+..+++|++|++++|++++ ++ .++++++|++|++++|++++..| +..+++|++|+|++|
T Consensus 317 n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 317 NNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 8777653 36777888888888887763 33 57778888888888888775433 667778888888776
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=1.7e-25 Score=228.86 Aligned_cols=187 Identities=27% Similarity=0.339 Sum_probs=103.9
Q ss_pred CCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCCC
Q 036117 389 PKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPRF 468 (641)
Q Consensus 389 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~ 468 (641)
++++.+++++|.+++..| +..+++|++|++++|.+++ + ..+..+++|+.+++++|.+++.. .+..++ +
T Consensus 197 ~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~------~ 264 (384)
T d2omza2 197 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLT------K 264 (384)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCT------T
T ss_pred cccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccc------c
Confidence 334444444444443322 2233444444444444432 1 12334444444444444443221 122222 4
Q ss_pred ccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCC
Q 036117 469 LRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGD 548 (641)
Q Consensus 469 L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 548 (641)
|++|+++++++++. + .+..++.++.++++.|.+.+. ..+..+++++.|++++|++.+.. .+..+++|++|++++
T Consensus 265 L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~ 338 (384)
T d2omza2 265 LTELKLGANQISNI-S-PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFAN 338 (384)
T ss_dssp CSEEECCSSCCCCC-G-GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCS
T ss_pred CCEeeccCcccCCC-C-ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCC
Confidence 55555555544321 1 244455666666666665532 23566777777777777776543 256777888888888
Q ss_pred CcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCC
Q 036117 549 NQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDN 597 (641)
Q Consensus 549 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 597 (641)
|++++. + .+.++++|++|++++|++++..| ++++++|++|+|++|
T Consensus 339 n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 339 NKVSDV-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SCCCCC-G-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCC-h-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 877743 3 57778888888888888875543 778888888888876
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=4e-23 Score=203.63 Aligned_cols=272 Identities=25% Similarity=0.319 Sum_probs=150.7
Q ss_pred CCEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEEEecc
Q 036117 90 LTALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLLRIGA 169 (641)
Q Consensus 90 L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~ 169 (641)
.++++-++.+++ .+|..+. +++++|++++|+++...+.+|.++++|++|++++|.+....|..|.+
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~----------- 77 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP----------- 77 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-----------
T ss_pred CCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhC-----------
Confidence 444555555554 3344332 34555555555555333334555555555555555555444444444
Q ss_pred ccCCCCCCcccCCCCCCCEEEcCCCCCCCCchhhcCCCCCcEEEeeCCcCCCCCChhhhcCCCCCcEEeccCCccc--cc
Q 036117 170 NYLEDPDPVKFKGMASLTDLWLDYNLLEKFPSFIAECSKLMFLDLSDNLIMGHIPIEQLTHLENLEYLNLTKNSFE--GE 247 (641)
Q Consensus 170 n~~~~~~~~~l~~l~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~--~~ 247 (641)
+++|++|++++|++..+|.. ....++.|++.+|.+. .++...+........++...+... ..
T Consensus 78 -------------l~~L~~L~l~~n~l~~l~~~--~~~~l~~L~~~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~~~~~ 141 (305)
T d1xkua_ 78 -------------LVKLERLYLSKNQLKELPEK--MPKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGI 141 (305)
T ss_dssp -------------CTTCCEEECCSSCCSBCCSS--CCTTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGB
T ss_pred -------------CCccCEecccCCccCcCccc--hhhhhhhhhccccchh-hhhhhhhhccccccccccccccccccCC
Confidence 44455555555544444432 2245556666665555 344444455556666666555322 23
Q ss_pred CCcccCCCCCCCEEEcCCCcCCccCCcccCCCCcccEeeeecccccccCccccCCCCCCCeeeccCccCCCCCCcCCCCC
Q 036117 248 IPREIKTFPKLRHLKLGQNKLTGTIPDEIGLLSNLEILEFHENLFHGLIPSSLGNLRRLQRLNLKSAGLNSSIPKELGFC 327 (641)
Q Consensus 248 ~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~ 327 (641)
.+..+..+++|+.+++++|.+. .++.. .+++|++|++++|...+..+..+..++.++.|++++|.+.+..+..+..+
T Consensus 142 ~~~~~~~l~~L~~l~l~~n~l~-~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l 218 (305)
T d1xkua_ 142 ENGAFQGMKKLSYIRIADTNIT-TIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 218 (305)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-SCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred CccccccccccCccccccCCcc-ccCcc--cCCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccccc
Confidence 3445566667777777777665 33332 24667777777777666666666677777777777777766666666667
Q ss_pred CCCCEEEccCccccccCchhhhcCCCCCeEeCCcccccccceeecccccccccCCcCCCCCCCCCEEEccCCcCc
Q 036117 328 ANLTFLELSINNLTGSLPLSLASLRQISELGISNNQLSEIISLQLQMNDLSGKLPPEIGLLPKLEYLYLFDNKFS 402 (641)
Q Consensus 328 ~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~l~~l~l~~~~l~~~~~~~l~~~~~L~~L~L~~n~l~ 402 (641)
++|++|++++|+++ .+|..+..+++|++|++++|+++.+.. ..+. .+......++|+.|++++|.+.
T Consensus 219 ~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~-----~~f~--~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 219 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS-----NDFC--PPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT-----TSSS--CSSCCTTSCCCSEEECCSSSSC
T ss_pred ccceeeeccccccc-ccccccccccCCCEEECCCCccCccCh-----hhcc--CcchhcccCCCCEEECCCCcCc
Confidence 77777777777776 456666667777777766666654311 1110 0122334566677777777654
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=8.2e-23 Score=201.38 Aligned_cols=247 Identities=18% Similarity=0.245 Sum_probs=135.8
Q ss_pred CCCCeeeccCccCCCCCCcCCCCCCCCCEEEccCccccccCchhhhcCCCCCeEeCCcccccccceeecccccccccCCc
Q 036117 304 RRLQRLNLKSAGLNSSIPKELGFCANLTFLELSINNLTGSLPLSLASLRQISELGISNNQLSEIISLQLQMNDLSGKLPP 383 (641)
Q Consensus 304 ~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~l~~l~l~~~~l~~~~~~ 383 (641)
+++++|++++|++....+..+..+++|++|++++|.+....|..+..++.|+.|++++|+++.+ |.
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l--------------~~ 96 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL--------------PE 96 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC--------------CS
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcC--------------cc
Confidence 3455555555555444444455555666666666665554555555566666666555554432 11
Q ss_pred CCCCCCCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCC--ccCcccccCCCCCCEEEccCCcCcccCCcchhcCC
Q 036117 384 EIGLLPKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFN--GSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSK 461 (641)
Q Consensus 384 ~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 461 (641)
. ..+.++.|++.+|.+.+..+..+.....+..++...|... ...+..+..+++|+++++++|.+. .+|..+ ..
T Consensus 97 ~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~ 171 (305)
T d1xkua_ 97 K--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PP 171 (305)
T ss_dssp S--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CT
T ss_pred c--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCccc--CC
Confidence 1 2345677777777777666666666667777777666443 223445666667777777776654 233221 11
Q ss_pred CCCCCCCccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCC
Q 036117 462 SDFGPRFLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDL 541 (641)
Q Consensus 462 ~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 541 (641)
++++|++++|..++.. +..+.+++.+++|++++|.+.+..+..+..+++|
T Consensus 172 ------~L~~L~l~~n~~~~~~------------------------~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L 221 (305)
T d1xkua_ 172 ------SLTELHLDGNKITKVD------------------------AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 221 (305)
T ss_dssp ------TCSEEECTTSCCCEEC------------------------TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTC
T ss_pred ------ccCEEECCCCcCCCCC------------------------hhHhhccccccccccccccccccccccccccccc
Confidence 4555555555544444 4444455555555555555555445555555555
Q ss_pred cEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCC------ccccCCCCCCEEeCCCCcCc
Q 036117 542 QYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIP------AELGNLTYLQNLDIFDNQLT 600 (641)
Q Consensus 542 ~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p------~~l~~l~~L~~L~L~~n~l~ 600 (641)
++|+|++|+++ .+|..+..+++|++|++++|+++.... .....+.+|+.|+|++|++.
T Consensus 222 ~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 222 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred eeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 55555555555 334455555566666666655553222 22344567777777777764
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=5.4e-23 Score=200.24 Aligned_cols=238 Identities=19% Similarity=0.169 Sum_probs=152.9
Q ss_pred CCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCC-cCcccCCcchhcCCCCCCCC
Q 036117 389 PKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSN-QLTGTLPPEIGNSKSDFGPR 467 (641)
Q Consensus 389 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n-~l~~~~~~~~~~~~~~~~~~ 467 (641)
+++++|+|++|+++...+..|.++++|++|++++|.+.+..+..+..++.++.+++..+ .+....+..+..++
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~------ 105 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG------ 105 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCT------
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccc------
Confidence 34566666666666555555666666666666666666555555566666666655433 33333344455554
Q ss_pred CccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCC
Q 036117 468 FLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLG 547 (641)
Q Consensus 468 ~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 547 (641)
+|++|++++|.+....+..+...+.|+.+++++|++.+..+.+|..+++|+.|++++|++.+..+..|..+++|+.++++
T Consensus 106 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (284)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred cCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhh
Confidence 66667776666654445555566677777777777765555666677777777777777776666677777777777777
Q ss_pred CCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCcCCCCcccC
Q 036117 548 DNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLRRNQLSDKI 627 (641)
Q Consensus 548 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~~n~l~~~~ 627 (641)
+|++++..|..|..+++|++|++++|.+.+..|..|+.+++|++|++++|++.+..+. .+-...++.+....+++....
T Consensus 186 ~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~-~~l~~~l~~~~~~~~~~~C~~ 264 (284)
T d1ozna_ 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSL 264 (284)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEE
T ss_pred hccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccc-hHHHHHHHhCcCCCCceEeCC
Confidence 7777777777777777777777777777766666777777777777777777644331 111133455555666666666
Q ss_pred cccccC
Q 036117 628 PAEIGK 633 (641)
Q Consensus 628 p~~~~~ 633 (641)
|..+.+
T Consensus 265 p~~l~g 270 (284)
T d1ozna_ 265 PQRLAG 270 (284)
T ss_dssp SGGGTT
T ss_pred chHHcC
Confidence 666655
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=4.4e-22 Score=193.73 Aligned_cols=227 Identities=19% Similarity=0.141 Sum_probs=196.3
Q ss_pred EEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCCCccEE
Q 036117 393 YLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPRFLRNV 472 (641)
Q Consensus 393 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~L~~L 472 (641)
.++.++++++ .+|..+. +.+++|+|++|.++...+..|.+++.|+++++++|.+.+..+..+.... .++.+
T Consensus 15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~------~~~~l 85 (284)
T d1ozna_ 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA------LLEQL 85 (284)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT------TCCEE
T ss_pred EEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccc------ccccc
Confidence 4566666666 5565443 5789999999999966667899999999999999999877766666665 78888
Q ss_pred EccC-CcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcc
Q 036117 473 SFSY-NNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQL 551 (641)
Q Consensus 473 ~ls~-n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 551 (641)
.... +.+....+..+.++++|++|++++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++
T Consensus 86 ~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l 165 (284)
T d1ozna_ 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (284)
T ss_dssp ECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcc
Confidence 7764 455555577789999999999999999877777888899999999999999987788899999999999999999
Q ss_pred cccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCcCCCCcccCc
Q 036117 552 SGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLRRNQLSDKIP 628 (641)
Q Consensus 552 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~~n~l~~~~p 628 (641)
++..+..+..+++|+++++++|++++..|..|+++++|++|++++|.+.+..|..+..+++|+.|++++|++....+
T Consensus 166 ~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 99889999999999999999999999999999999999999999999997777888899999999999999976543
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=3.5e-21 Score=185.12 Aligned_cols=200 Identities=20% Similarity=0.181 Sum_probs=142.3
Q ss_pred CCCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCC
Q 036117 388 LPKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPR 467 (641)
Q Consensus 388 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~ 467 (641)
...+.+++.+++.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|++++|.++. +|. +..++
T Consensus 9 ~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~-~~~l~------ 77 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQV-DGTLP------ 77 (266)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EEC-CSCCT------
T ss_pred cCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-ccc-ccccc------
Confidence 455667788888887 4565443 578888888888886555678888888888888888763 322 23333
Q ss_pred CccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCC
Q 036117 468 FLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLG 547 (641)
Q Consensus 468 ~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 547 (641)
+|++|++++|+++ ..+..+..++.|+.|++++|.+.+..+..+..+.+++.|++++|.+....+..+..++.++.++++
T Consensus 78 ~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~ 156 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (266)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ccccccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccc
Confidence 7888888888776 345566667777777777777766666666667777777777777776666666667777777777
Q ss_pred CCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCc
Q 036117 548 DNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLT 600 (641)
Q Consensus 548 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 600 (641)
+|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++.
T Consensus 157 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 157 NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 77777666666777777777777777776 66666667777777777777665
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.9e-20 Score=178.55 Aligned_cols=193 Identities=23% Similarity=0.188 Sum_probs=160.0
Q ss_pred cccccccccCCcCCCCCCCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcc
Q 036117 372 LQMNDLSGKLPPEIGLLPKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTG 451 (641)
Q Consensus 372 l~~~~l~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~ 451 (641)
.++++++ .+|+.+. +++++|+|++|++++..+..|..+++|++|++++|.++ .++ .+..+++|++|++++|++.+
T Consensus 17 C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~~ 91 (266)
T d1p9ag_ 17 CDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQS 91 (266)
T ss_dssp CTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCSS
T ss_pred ccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccccccccc
Confidence 3333444 3465543 57999999999998777788999999999999999987 344 35788999999999999873
Q ss_pred cCCcchhcCCCCCCCCCccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCcccc
Q 036117 452 TLPPEIGNSKSDFGPRFLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDI 531 (641)
Q Consensus 452 ~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~ 531 (641)
.+..+..++ +|+.|++++|.+....+..+..+.+++.+++++|.+....+..+..++.++.+++++|++++..
T Consensus 92 -~~~~~~~l~------~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~ 164 (266)
T d1p9ag_ 92 -LPLLGQTLP------ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164 (266)
T ss_dssp -CCCCTTTCT------TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred -ccccccccc------ccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccC
Confidence 455666666 8999999999988766777788899999999999998777777888999999999999999888
Q ss_pred CcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcc
Q 036117 532 TNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKG 577 (641)
Q Consensus 532 ~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 577 (641)
+..|+.+++|++|+|++|+++ .+|+.+..+++|+.|+|++|++..
T Consensus 165 ~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 165 AGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp TTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 888899999999999999998 778888889999999999998863
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81 E-value=1.8e-17 Score=166.34 Aligned_cols=97 Identities=31% Similarity=0.349 Sum_probs=60.9
Q ss_pred CCCEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCC-CCCcEEEe
Q 036117 89 NLTALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNL-QNAWLLRI 167 (641)
Q Consensus 89 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l-~~L~~L~l 167 (641)
++++|||+++.++ .+|+. .++|++|++++|+++ .+|..+ .+|++|++++|.++. ++ .+ +.|++|++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~-l~----~lp~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKA-LS----DLPPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSC-CC----SCCTTCCEEEC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccch-hh----hhccccccccc
Confidence 6788888888887 56653 467888888888887 566543 567888888877662 22 12 24666666
Q ss_pred ccccCCCCCCcccCCCCCCCEEEcCCCCCCCCc
Q 036117 168 GANYLEDPDPVKFKGMASLTDLWLDYNLLEKFP 200 (641)
Q Consensus 168 ~~n~~~~~~~~~l~~l~~L~~L~l~~~~~~~l~ 200 (641)
++|.+.... .+..+++|++|+++++.+...+
T Consensus 106 ~~n~l~~lp--~~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 106 SNNQLEKLP--ELQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp CSSCCSSCC--CCTTCTTCCEEECCSSCCSCCC
T ss_pred ccccccccc--chhhhccceeeccccccccccc
Confidence 666655443 2344555555555555554433
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.79 E-value=4e-16 Score=156.21 Aligned_cols=183 Identities=22% Similarity=0.279 Sum_probs=81.4
Q ss_pred CCCCCCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCC
Q 036117 385 IGLLPKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDF 464 (641)
Q Consensus 385 l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~ 464 (641)
+..++.++.+++.+|...... . .....+.+...++.+. .++ .+..++.++.+++++|... .++....
T Consensus 158 l~~l~~l~~L~l~~n~~~~~~-~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~-~~~~~~~------ 224 (353)
T d1jl5a_ 158 LQNLPFLTAIYADNNSLKKLP-D---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPDLPP------ 224 (353)
T ss_dssp CTTCTTCCEEECCSSCCSSCC-C---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS-SCCSCCT------
T ss_pred ccccccceecccccccccccc-c---cccccccccccccccc-ccc-ccccccccccccccccccc-ccccccc------
Confidence 344555666666665544221 1 1122333444433332 222 2345566666666666543 2222111
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccC-CCCcEEECCCCcCccccCcccCCCCCCcE
Q 036117 465 GPRFLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNC-TGLTRVRLEQNRLDGDITNALGIYPDLQY 543 (641)
Q Consensus 465 ~~~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 543 (641)
++..+.+.++.+... +. ....+...++..+.+.+ +..+ ......++..+.+.+. ...+++|++
T Consensus 225 ---~l~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~-----l~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~ 288 (353)
T d1jl5a_ 225 ---SLEALNVRDNYLTDL-PE---LPQSLTFLDVSENIFSG-----LSELPPNLYYLNASSNEIRSL----CDLPPSLEE 288 (353)
T ss_dssp ---TCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSE-----ESCCCTTCCEEECCSSCCSEE----CCCCTTCCE
T ss_pred ---ccccccccccccccc-cc---ccccccccccccccccc-----cccccchhcccccccCccccc----cccCCCCCE
Confidence 355555555554321 11 12233344443333221 1111 2233444554444422 123456666
Q ss_pred EeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCc
Q 036117 544 IDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPA 605 (641)
Q Consensus 544 L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~ 605 (641)
|++++|+++ .+|.. +++|+.|++++|+++ .+|.. +++|++|++++|+++ .+|.
T Consensus 289 L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 289 LNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp EECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred EECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCc
Confidence 666666655 33322 345666666666665 34432 345666666666654 4553
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=9.1e-21 Score=198.05 Aligned_cols=109 Identities=19% Similarity=0.203 Sum_probs=49.1
Q ss_pred CCCEEEcCCCCCCCC--chhhcCCCCCcEEEeeCCcCCCCCC---hhhhcCCCCCcEEeccCCcccccC----CcccC-C
Q 036117 185 SLTDLWLDYNLLEKF--PSFIAECSKLMFLDLSDNLIMGHIP---IEQLTHLENLEYLNLTKNSFEGEI----PREIK-T 254 (641)
Q Consensus 185 ~L~~L~l~~~~~~~l--~~~l~~~~~L~~L~l~~~~~~~~~~---~~~l~~l~~L~~L~l~~n~~~~~~----~~~l~-~ 254 (641)
+|++|++++++++.. ...+..+++++.|++++|.++..-. ...+..+++|++|++++|.++... ...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 355666666655332 3334445555666666665541100 112345555556666555554211 11111 1
Q ss_pred CCCCCEEEcCCCcCCcc----CCcccCCCCcccEeeeeccccc
Q 036117 255 FPKLRHLKLGQNKLTGT----IPDEIGLLSNLEILEFHENLFH 293 (641)
Q Consensus 255 l~~L~~L~L~~~~l~~~----~~~~l~~~~~L~~L~l~~n~~~ 293 (641)
..+|++|++++|.+++. ++..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 23455555555555432 1222344455555555555443
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.6e-20 Score=193.42 Aligned_cols=385 Identities=18% Similarity=0.156 Sum_probs=232.8
Q ss_pred CCCcEEeccCCcccccC-CcccCCCCCCCEEEcCCCcCCcc----CCcccCCCCcccEeeeecccccccC----ccccC-
Q 036117 232 ENLEYLNLTKNSFEGEI-PREIKTFPKLRHLKLGQNKLTGT----IPDEIGLLSNLEILEFHENLFHGLI----PSSLG- 301 (641)
Q Consensus 232 ~~L~~L~l~~n~~~~~~-~~~l~~l~~L~~L~L~~~~l~~~----~~~~l~~~~~L~~L~l~~n~~~~~~----~~~l~- 301 (641)
.+|++||++++++++.. ...+..+++++.|+|++|.++.. +...+..+++|++|++++|.++... ...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 35789999999887532 33456678889999999987632 2334567888999999888875321 12222
Q ss_pred CCCCCCeeeccCccCCCC----CCcCCCCCCCCCEEEccCccccccCchhhh----c-CCCCCeEeCCcccccccceeec
Q 036117 302 NLRRLQRLNLKSAGLNSS----IPKELGFCANLTFLELSINNLTGSLPLSLA----S-LRQISELGISNNQLSEIISLQL 372 (641)
Q Consensus 302 ~l~~L~~L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~----~-~~~L~~L~l~~n~~~~l~~l~l 372 (641)
...+|++|++++|.+++. ++..+..+++|++|++++|.+.......+. . .............+....
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---- 157 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS---- 157 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG----
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhh----
Confidence 234688888888877543 234566778888888888877643222221 1 111222222222111000
Q ss_pred ccccccccCCcCCCCCCCCCEEEccCCcCcCCch----hhh-hCCCCCCeEecccCcCCcc----CcccccCCCCCCEEE
Q 036117 373 QMNDLSGKLPPEIGLLPKLEYLYLFDNKFSGPIP----QQI-GNLTNLFDLQLANNFFNGS----IPSTIGNLSSLVKLS 443 (641)
Q Consensus 373 ~~~~l~~~~~~~l~~~~~L~~L~L~~n~l~~~~~----~~~-~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~ 443 (641)
...+...+.....++.++++++....... ..+ ........+++..+.+... ....+...+.++.++
T Consensus 158 -----~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 232 (460)
T d1z7xw1 158 -----CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELA 232 (460)
T ss_dssp -----HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEE
T ss_pred -----hcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccc
Confidence 00000112234567788887776543211 111 1233556677777665421 122344567888888
Q ss_pred ccCCcCcccC-----CcchhcCCCCCCCCCccEEEccCCccccc----CCccccCCCCCceEeccCCcccCCCccc----
Q 036117 444 LSSNQLTGTL-----PPEIGNSKSDFGPRFLRNVSFSYNNFSGK----LPPGICRGGNLIYLTANVNKLVGPIPES---- 510 (641)
Q Consensus 444 ls~n~l~~~~-----~~~~~~~~~~~~~~~L~~L~ls~n~l~~~----~~~~~~~~~~L~~L~l~~n~~~~~~~~~---- 510 (641)
+++|.+.... +...... ..++.+++++|.+... ....+...+.++.+++++|.+.......
T Consensus 233 ~~~n~~~~~~~~~~~~~~~~~~------~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~ 306 (460)
T d1z7xw1 233 LGSNKLGDVGMAELCPGLLHPS------SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 306 (460)
T ss_dssp CCSSBCHHHHHHHHHHHHTSTT------CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred hhhccccccccchhhccccccc------ccccccccccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 8888764321 1111112 2688888888877543 2233456778888888888875432221
Q ss_pred c-ccCCCCcEEECCCCcCccccC----cccCCCCCCcEEeCCCCcccccCC----hhhh-cCCCCCEEeCcCCcCccc--
Q 036117 511 L-WNCTGLTRVRLEQNRLDGDIT----NALGIYPDLQYIDLGDNQLSGVLT----SNWG-KCTNLSNFRISGNRIKGG-- 578 (641)
Q Consensus 511 l-~~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~Ls~n~~~~~~~----~~~~-~l~~L~~L~L~~n~l~~~-- 578 (641)
+ .....|+.+++++|.+..... ..+...++|++|+|++|++++... +.+. ..+.|++|+|++|++++.
T Consensus 307 l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~ 386 (460)
T d1z7xw1 307 LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSC 386 (460)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred ccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHH
Confidence 1 234678899999988875432 233456789999999998875422 2332 356799999999998643
Q ss_pred --CCccccCCCCCCEEeCCCCcCcccCCccc----c-CCCCCCEEeCcCCCCcccCcccc
Q 036117 579 --IPAELGNLTYLQNLDIFDNQLTGKIPAQL----F-RSSFLIRLNLRRNQLSDKIPAEI 631 (641)
Q Consensus 579 --~p~~l~~l~~L~~L~L~~n~l~~~ip~~l----~-~~~~L~~l~l~~n~l~~~~p~~~ 631 (641)
++..+..+++|++|+|++|+++......+ . ....|+.|++++|++.+..+..+
T Consensus 387 ~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l 446 (460)
T d1z7xw1 387 SSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 446 (460)
T ss_dssp HHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHHHHH
Confidence 44556677899999999999876533333 2 23479999999999886665444
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=4.9e-17 Score=151.84 Aligned_cols=186 Identities=23% Similarity=0.357 Sum_probs=83.0
Q ss_pred CCCCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCC
Q 036117 388 LPKLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPR 467 (641)
Q Consensus 388 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~ 467 (641)
+.+|++|++.+|.++.. ..+..+++|++|++++|.+.+..+ +..+++++++++++|.++ .+
T Consensus 40 l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i-------------- 100 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NV-------------- 100 (227)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CC--------------
T ss_pred cCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-cc--------------
Confidence 34455555555555422 234455555555555555543211 444555555555555443 11
Q ss_pred CccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCC
Q 036117 468 FLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLG 547 (641)
Q Consensus 468 ~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 547 (641)
..+..++.|+.++++++...+.. .+...+.+..+.++++.+.... .+..+++|+.|+++
T Consensus 101 -----------------~~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~ 159 (227)
T d1h6ua2 101 -----------------SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIG 159 (227)
T ss_dssp -----------------GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECC
T ss_pred -----------------ccccccccccccccccccccccc--hhccccchhhhhchhhhhchhh--hhcccccccccccc
Confidence 12333444444444444333211 1233344444454444443221 13344455555555
Q ss_pred CCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCc
Q 036117 548 DNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLR 619 (641)
Q Consensus 548 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~ 619 (641)
+|.+.+.. .++++++|++|++++|++++ ++ .++++++|++|+|++|+++ .+| .+..+++|+.|+++
T Consensus 160 ~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt-~i~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 160 NAQVSDLT--PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQIS-DVS-PLANTSNLFIVTLT 225 (227)
T ss_dssp SSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCC-BCG-GGTTCTTCCEEEEE
T ss_pred ccccccch--hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCC-CCc-ccccCCCCCEEEee
Confidence 55444321 24445555555555555542 22 2445555555555555554 233 24445555555544
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=8.4e-17 Score=150.22 Aligned_cols=81 Identities=23% Similarity=0.345 Sum_probs=37.6
Q ss_pred CCCCCCCEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcE
Q 036117 85 SAFPNLTALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWL 164 (641)
Q Consensus 85 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~ 164 (641)
+.+.+|++|++.+|++++ + ..++.+++|++|++++|.+++..| +..+++|+++++++|.++. + ..+.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~~ 111 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKT 111 (227)
T ss_dssp HHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCE
T ss_pred HHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--ccccccccccccccccccc-c-ccccccccccc
Confidence 334455555555555542 2 234555555555555555543221 4455555555555554432 1 12344444444
Q ss_pred EEecccc
Q 036117 165 LRIGANY 171 (641)
Q Consensus 165 L~l~~n~ 171 (641)
++++++.
T Consensus 112 l~l~~~~ 118 (227)
T d1h6ua2 112 LDLTSTQ 118 (227)
T ss_dssp EECTTSC
T ss_pred ccccccc
Confidence 4444443
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=6.3e-16 Score=140.70 Aligned_cols=148 Identities=24% Similarity=0.343 Sum_probs=71.7
Q ss_pred CCCCCCEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEE
Q 036117 86 AFPNLTALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLL 165 (641)
Q Consensus 86 ~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L 165 (641)
.++++++|+++++.+.. + +.++.+++|++|++++|++++. + .++++++|++|++++|.+... + .+.++++|+++
T Consensus 38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~-~-~l~~l~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCc-c-cccCCcccccccccccccccc-c-ccccccccccc
Confidence 34555666666665552 2 2355566666666666666543 2 155666666666666555422 1 24555555555
Q ss_pred EeccccCCCCCCcccCCCCCCCEEEcCCCCCCCCchhhcCCCCCcEEEeeCCcCCCCCChhhhcCCCCCcEEeccCCccc
Q 036117 166 RIGANYLEDPDPVKFKGMASLTDLWLDYNLLEKFPSFIAECSKLMFLDLSDNLIMGHIPIEQLTHLENLEYLNLTKNSFE 245 (641)
Q Consensus 166 ~l~~n~~~~~~~~~l~~l~~L~~L~l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~ 245 (641)
+++++..... ..+..+++|+.|++++|.+..++ .+..+++|++|++.+|.+++ ++ .+.++++|++|++++|+++
T Consensus 112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~l~~-l~--~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 112 TLFNNQITDI--DPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQVTD-LK--PLANLTTLERLDISSNKVS 185 (199)
T ss_dssp ECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCC-CG--GGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--cccchhhhhHHhhhhhhhhcccc-cccccccccccccccccccC-Cc--cccCCCCCCEEECCCCCCC
Confidence 5555544432 22444445555555555444433 24444444444444444431 11 1234444444444444443
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=5.7e-16 Score=142.26 Aligned_cols=164 Identities=26% Similarity=0.359 Sum_probs=82.5
Q ss_pred CCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEEEeccccCCCCCCcccCCCCCCCEEE
Q 036117 111 ATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLLRIGANYLEDPDPVKFKGMASLTDLW 190 (641)
Q Consensus 111 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~ 190 (641)
+..|++|++++|.+++. + .+..+++|++|++++|++++. + .++.+++|++|++++|+++++. .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKDLS--SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccccc--cccccccccccc
Confidence 34455555555555432 1 244455555555555555432 1 2344555555555555444321 344555555555
Q ss_pred cCCCCCCCCchhhcCCCCCcEEEeeCCcCCCCCChhhhcCCCCCcEEeccCCcccccCCcccCCCCCCCEEEcCCCcCCc
Q 036117 191 LDYNLLEKFPSFIAECSKLMFLDLSDNLIMGHIPIEQLTHLENLEYLNLTKNSFEGEIPREIKTFPKLRHLKLGQNKLTG 270 (641)
Q Consensus 191 l~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~ 270 (641)
+++|.+..++ .+..+++++.+++++|.+.+. + .+..+++|+++++++|++++ ++ .+..+++|++|++++|.++.
T Consensus 119 l~~~~~~~~~-~l~~l~~l~~l~~~~n~l~~~-~--~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 119 LEHNGISDIN-GLVHLPQLESLYLGNNKITDI-T--VLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB
T ss_pred cccccccccc-ccccccccccccccccccccc-c--cccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCC
Confidence 5555554443 255555666666666655421 1 23455566666666665553 22 25555666666666665552
Q ss_pred cCCcccCCCCcccEeeee
Q 036117 271 TIPDEIGLLSNLEILEFH 288 (641)
Q Consensus 271 ~~~~~l~~~~~L~~L~l~ 288 (641)
++ .+..+++|++|+++
T Consensus 193 -l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 193 -LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -CG-GGTTCTTCSEEEEE
T ss_pred -Ch-hhcCCCCCCEEEcc
Confidence 22 35555566665554
No 19
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.67 E-value=8.6e-17 Score=145.61 Aligned_cols=173 Identities=14% Similarity=0.187 Sum_probs=106.7
Q ss_pred CCEEEccCCcCcccCCcchhcCCCCCCCCCccEEEccCCcccccC-CccccCCCCCceEeccCCcccCCCccccccCCCC
Q 036117 439 LVKLSLSSNQLTGTLPPEIGNSKSDFGPRFLRNVSFSYNNFSGKL-PPGICRGGNLIYLTANVNKLVGPIPESLWNCTGL 517 (641)
Q Consensus 439 L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~-~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L 517 (641)
.++++.+++.++ .+|..+. +.+++|++++|++++.+ +..+..+++|+.|++++|++.+..+..+..+++|
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--------~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L 80 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--------LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--------TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CCEEEEeCCCcC-ccCCCCC--------CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccccc
Confidence 346677777666 5565432 15777777777776533 3445666777777777777766666666667777
Q ss_pred cEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCC
Q 036117 518 TRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDN 597 (641)
Q Consensus 518 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 597 (641)
++|++++|++.+..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++....+.. .-...++.+.+..+
T Consensus 81 ~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~-~~~~~l~~~~l~~~ 159 (192)
T d1w8aa_ 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGG 159 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGG
T ss_pred ceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchH-HHhhhhhhhcccCC
Confidence 77777777777666666677777777777777777666666667777777777777665322111 11123445556666
Q ss_pred cCcccCCccccCCCCCCEEeCcCCCCc
Q 036117 598 QLTGKIPAQLFRSSFLIRLNLRRNQLS 624 (641)
Q Consensus 598 ~l~~~ip~~l~~~~~L~~l~l~~n~l~ 624 (641)
.+....|..+ ..++.++|+.|.+.
T Consensus 160 ~~~c~~p~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 160 AARCGAPSKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp GCBBCSSTTT---TTSBGGGSCTTTCC
T ss_pred CeEeCCChhh---cCCEeeecCHhhCc
Confidence 6665555433 33445566666664
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.5e-16 Score=147.65 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=80.4
Q ss_pred CCCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCccC-cccccCCCCCCEEEccC-CcCcccCCcchhcCCCCCCCC
Q 036117 390 KLEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGSI-PSTIGNLSSLVKLSLSS-NQLTGTLPPEIGNSKSDFGPR 467 (641)
Q Consensus 390 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~ls~-n~l~~~~~~~~~~~~~~~~~~ 467 (641)
++++|++++|+++...+..|.++++|++|++++|.+...+ +..|..++.++++.+.. |.+....+..+..++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~------ 103 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP------ 103 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCT------
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccc------
Confidence 4555555555555433344555555666665555554332 23345555555555443 233333333333333
Q ss_pred CccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCC-CCCcEEeC
Q 036117 468 FLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIY-PDLQYIDL 546 (641)
Q Consensus 468 ~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~L 546 (641)
+|+++++++|.+....+ .. .+..++.+..+...++.+....+..+..+ ..++.|++
T Consensus 104 ~L~~l~l~~~~l~~~~~--~~---------------------~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l 160 (242)
T d1xwdc1 104 NLQYLLISNTGIKHLPD--VH---------------------KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 160 (242)
T ss_dssp TCCEEEEESCCCCSCCC--CT---------------------TTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEEC
T ss_pred cccccccchhhhccccc--cc---------------------ccccccccccccccccccccccccccccccccceeeec
Confidence 44444444444331111 01 11222333333333444433333333333 24555555
Q ss_pred CCCcccccCChhhhcCCCCCEE-eCcCCcCcccCCccccCCCCCCEEeCCCCcCc
Q 036117 547 GDNQLSGVLTSNWGKCTNLSNF-RISGNRIKGGIPAELGNLTYLQNLDIFDNQLT 600 (641)
Q Consensus 547 s~n~~~~~~~~~~~~l~~L~~L-~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 600 (641)
++|+++...+..+ ..++++++ .+++|+++...+..|.++++|++|+|++|+++
T Consensus 161 ~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 161 NKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 214 (242)
T ss_dssp CSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC
T ss_pred ccccccccccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC
Confidence 5555554333322 22333333 34445555333334556666666666666665
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=4.6e-16 Score=146.82 Aligned_cols=106 Identities=19% Similarity=0.233 Sum_probs=64.2
Q ss_pred CEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCC-ChhccCCCCCcEEEecc
Q 036117 91 TALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQI-PHQLSNLQNAWLLRIGA 169 (641)
Q Consensus 91 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~-~~~l~~l~~L~~L~l~~ 169 (641)
++++.++..++ .+|..+. +++++|++++|.++...+.+|.++++|++|++++|.+...+ +..|.++++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 45666666666 4554432 46777777777776444445677777777777777665433 34566677777766543
Q ss_pred -ccCCCCCCcccCCCCCCCEEEcCCCCCCCC
Q 036117 170 -NYLEDPDPVKFKGMASLTDLWLDYNLLEKF 199 (641)
Q Consensus 170 -n~~~~~~~~~l~~l~~L~~L~l~~~~~~~l 199 (641)
|.+....+..|.++++|++++++++.+...
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~ 118 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHL 118 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSC
T ss_pred cccccccccccccccccccccccchhhhccc
Confidence 445555555555666666666655555433
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=8e-16 Score=141.24 Aligned_cols=121 Identities=29% Similarity=0.369 Sum_probs=61.8
Q ss_pred CCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEE
Q 036117 489 RGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNF 568 (641)
Q Consensus 489 ~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L 568 (641)
.+++|+.|++++|++.+ +| .+..+++|+.|++++|.+.. ...+..++.++.+++++|.+++. ..+..+++|+++
T Consensus 88 ~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L~~l 161 (210)
T d1h6ta2 88 NLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (210)
T ss_dssp TCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCccccccccccccccc-cc-cccccccccccccccccccc--ccccccccccccccccccccccc--cccccccccccc
Confidence 34444444444444432 22 24445555555555555432 12344555555666655555432 234455566666
Q ss_pred eCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCc
Q 036117 569 RISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLR 619 (641)
Q Consensus 569 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~ 619 (641)
++++|++++ ++ .+.++++|++|++++|+++ .+| .+..+++|++|+|+
T Consensus 162 ~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 162 SLEDNQISD-IV-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp ECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEE
T ss_pred ccccccccc-cc-cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEcc
Confidence 666666553 22 2555666666666666655 344 35555666666654
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=1.4e-15 Score=138.42 Aligned_cols=142 Identities=30% Similarity=0.392 Sum_probs=83.8
Q ss_pred ccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCC
Q 036117 487 ICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLS 566 (641)
Q Consensus 487 ~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~ 566 (641)
+..+++|++|++++|++.+..| +.++++|++|++++|.+.... .++.++.|+.|++++|.+... ..+..+++|+
T Consensus 58 l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~ 131 (199)
T d2omxa2 58 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTLFNNQITDI--DPLKNLTNLN 131 (199)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCS
T ss_pred cccCCCcCcCccccccccCccc--ccCCccccccccccccccccc--ccccccccccccccccccccc--cccchhhhhH
Confidence 3445555555555555543222 556666666666666655322 255666677777766665543 2355666777
Q ss_pred EEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCcCCCCcccCcccccCCCCCcCC
Q 036117 567 NFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLRRNQLSDKIPAEIGKLSRLQYL 640 (641)
Q Consensus 567 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l 640 (641)
.|++++|++.. + ..+..+++|++|++++|.+++ ++ .+..+++|++|++++|++++ +| .++++++|+.|
T Consensus 132 ~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 132 RLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp EEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred Hhhhhhhhhcc-c-ccccccccccccccccccccC-Cc-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 77777776652 2 246666777777777777663 33 35666777777777777654 33 35666666653
No 24
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.65 E-value=1.7e-16 Score=143.56 Aligned_cols=172 Identities=16% Similarity=0.210 Sum_probs=98.8
Q ss_pred CeEecccCcCCccCcccccCCCCCCEEEccCCcCcccC-CcchhcCCCCCCCCCccEEEccCCcccccCCccccCCCCCc
Q 036117 416 FDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQLTGTL-PPEIGNSKSDFGPRFLRNVSFSYNNFSGKLPPGICRGGNLI 494 (641)
Q Consensus 416 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~-~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~L~ 494 (641)
+.++.+++.++ .+|+.+. +.+++|++++|.+++.+ +..+..+. +|++|++++|.+....+..+..++.|+
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~------~L~~L~L~~N~i~~~~~~~~~~~~~L~ 81 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLP------HLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCT------TCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCc------eEeeeeccccccccccccccccccccc
Confidence 45666666665 4554332 45666666666665433 33344444 666666666666655566666666666
Q ss_pred eEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCc
Q 036117 495 YLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNR 574 (641)
Q Consensus 495 ~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~ 574 (641)
.|++++|++....|.+|.++++|++|+|++|++++..+..|..+++|++|+|++|++.......+. ...++.+.+..+.
T Consensus 82 ~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~-~~~l~~~~l~~~~ 160 (192)
T d1w8aa_ 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGA 160 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGG
T ss_pred eeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHH-hhhhhhhcccCCC
Confidence 666666666655555666666666666666666666666666666666666666666543222111 1234445555555
Q ss_pred CcccCCccccCCCCCCEEeCCCCcCc
Q 036117 575 IKGGIPAELGNLTYLQNLDIFDNQLT 600 (641)
Q Consensus 575 l~~~~p~~l~~l~~L~~L~L~~n~l~ 600 (641)
++...|.. +..++.++|+.|.+.
T Consensus 161 ~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 161 ARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp CBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred eEeCCChh---hcCCEeeecCHhhCc
Confidence 55555533 334455566666654
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=9.9e-16 Score=147.69 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=167.4
Q ss_pred CCEEEccCCcCcCCchhhhhCCCCCCeEecccCcCCcc-CcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCCCc
Q 036117 391 LEYLYLFDNKFSGPIPQQIGNLTNLFDLQLANNFFNGS-IPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPRFL 469 (641)
Q Consensus 391 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~L 469 (641)
...+.++...+..... ......+|++|++++|.+.+. +...+..+++|++|++++|.+.+..+..+...+ +|
T Consensus 25 ~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~------~L 97 (284)
T d2astb2 25 VIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNS------NL 97 (284)
T ss_dssp CSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCT------TC
T ss_pred ceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCC------CC
Confidence 4566666655443322 233456899999999988754 456678899999999999999877777777766 89
Q ss_pred cEEEccCCc-cccc-CCccccCCCCCceEeccCCcc-cCC-Cccccc-cCCCCcEEECCCCc--Cccc-cCcccCCCCCC
Q 036117 470 RNVSFSYNN-FSGK-LPPGICRGGNLIYLTANVNKL-VGP-IPESLW-NCTGLTRVRLEQNR--LDGD-ITNALGIYPDL 541 (641)
Q Consensus 470 ~~L~ls~n~-l~~~-~~~~~~~~~~L~~L~l~~n~~-~~~-~~~~l~-~~~~L~~L~l~~n~--l~~~-~~~~~~~l~~L 541 (641)
++|++++|. +++. +......+++|++|++++|.. ... +...+. .++.|+.|+++++. ++.. +......+|+|
T Consensus 98 ~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L 177 (284)
T d2astb2 98 VRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL 177 (284)
T ss_dssp SEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTC
T ss_pred cCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccc
Confidence 999999964 5432 222345689999999999753 321 222233 35789999999863 3332 23334568999
Q ss_pred cEEeCCCCc-ccccCChhhhcCCCCCEEeCcCC-cCcccCCccccCCCCCCEEeCCCCcCcccCCccccCCCCCCEEeCc
Q 036117 542 QYIDLGDNQ-LSGVLTSNWGKCTNLSNFRISGN-RIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFRSSFLIRLNLR 619 (641)
Q Consensus 542 ~~L~Ls~n~-~~~~~~~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~~~~L~~l~l~ 619 (641)
++|++++|. +++..+..+.++++|++|++++| .+++.....++++++|+.|++++|--.+.++.-... +..|++.
T Consensus 178 ~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~---lp~L~i~ 254 (284)
T d2astb2 178 VHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA---LPHLQIN 254 (284)
T ss_dssp SEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHH---STTSEES
T ss_pred cccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHh---Ccccccc
Confidence 999999975 78778888999999999999996 577666677889999999999998222222222223 4445678
Q ss_pred CCCCcccCcccccCCC
Q 036117 620 RNQLSDKIPAEIGKLS 635 (641)
Q Consensus 620 ~n~l~~~~p~~~~~l~ 635 (641)
.+++++..+..+++..
T Consensus 255 ~~~ls~~~~~~~~~~~ 270 (284)
T d2astb2 255 CSHFTTIARPTIGNKK 270 (284)
T ss_dssp CCCSCCTTCSSCSSTT
T ss_pred CccCCCCCCCccCccc
Confidence 8888887777766543
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=4.1e-15 Score=143.29 Aligned_cols=215 Identities=16% Similarity=0.166 Sum_probs=154.7
Q ss_pred CCCCCCCEEEccCCcCcCC-chhhhhCCCCCCeEecccCcCCccCcccccCCCCCCEEEccCCc-CcccC-CcchhcCCC
Q 036117 386 GLLPKLEYLYLFDNKFSGP-IPQQIGNLTNLFDLQLANNFFNGSIPSTIGNLSSLVKLSLSSNQ-LTGTL-PPEIGNSKS 462 (641)
Q Consensus 386 ~~~~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ls~n~-l~~~~-~~~~~~~~~ 462 (641)
....+|++|+++++.+++. +...+..+++|++|++++|.+.+..+..+.++++|++|++++|. +++.. ......++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~- 121 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS- 121 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT-
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH-
Confidence 3456899999999988754 34557789999999999999988778888899999999999974 44321 12223445
Q ss_pred CCCCCCccEEEccCCc-cccc-CCcccc-CCCCCceEeccCCc--ccC-CCccccccCCCCcEEECCCC-cCccccCccc
Q 036117 463 DFGPRFLRNVSFSYNN-FSGK-LPPGIC-RGGNLIYLTANVNK--LVG-PIPESLWNCTGLTRVRLEQN-RLDGDITNAL 535 (641)
Q Consensus 463 ~~~~~~L~~L~ls~n~-l~~~-~~~~~~-~~~~L~~L~l~~n~--~~~-~~~~~l~~~~~L~~L~l~~n-~l~~~~~~~~ 535 (641)
+|++|++++|. +++. +...+. .++.|+.|+++++. +.. .+.....+|++|++|++++| .+++.....+
T Consensus 122 -----~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l 196 (284)
T d2astb2 122 -----RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 196 (284)
T ss_dssp -----TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred -----hccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhh
Confidence 89999999974 4332 222233 35789999999864 322 22333567999999999987 4676777888
Q ss_pred CCCCCCcEEeCCCC-cccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCccccC
Q 036117 536 GIYPDLQYIDLGDN-QLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQLFR 609 (641)
Q Consensus 536 ~~l~~L~~L~Ls~n-~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~l~~ 609 (641)
..+++|++|++++| .+++.....++++++|++|++++|--.+.++.....++.| ++..+++++..+..++.
T Consensus 197 ~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L---~i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 197 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHL---QINCSHFTTIARPTIGN 268 (284)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTS---EESCCCSCCTTCSSCSS
T ss_pred cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCccc---cccCccCCCCCCCccCc
Confidence 89999999999996 5887777788999999999999982222222222445555 45777787655555544
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.53 E-value=1.5e-15 Score=151.33 Aligned_cols=256 Identities=18% Similarity=0.198 Sum_probs=133.4
Q ss_pred CchhhhcCCCCCeEeCCcccccccceeecccccccccCCcCCCCCCCCCEEEccCCcCcCC----------chhhhhCCC
Q 036117 344 LPLSLASLRQISELGISNNQLSEIISLQLQMNDLSGKLPPEIGLLPKLEYLYLFDNKFSGP----------IPQQIGNLT 413 (641)
Q Consensus 344 ~~~~l~~~~~L~~L~l~~n~~~~l~~l~l~~~~l~~~~~~~l~~~~~L~~L~L~~n~l~~~----------~~~~~~~l~ 413 (641)
+...+.....+++|++++|.+..-.. ..+...+...++|+.++++++..... +...+..++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~---------~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~ 93 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAA---------RWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCP 93 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHH---------HHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCT
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHH---------HHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCC
Confidence 34455666677777766665432100 01123345566777777776543311 112234556
Q ss_pred CCCeEecccCcCCcc----CcccccCCCCCCEEEccCCcCcccCCcchhcCCCCCCCCCccEEEccCCcccccCCccccC
Q 036117 414 NLFDLQLANNFFNGS----IPSTIGNLSSLVKLSLSSNQLTGTLPPEIGNSKSDFGPRFLRNVSFSYNNFSGKLPPGICR 489 (641)
Q Consensus 414 ~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 489 (641)
+|+.|++++|.+... +...+..+++|++|++++|.+.......+... +..+ ........
T Consensus 94 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~--------l~~~---------~~~~~~~~ 156 (344)
T d2ca6a1 94 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--------LQEL---------AVNKKAKN 156 (344)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--------HHHH---------HHHHHHHT
T ss_pred Ccccccccccccccccccchhhhhcccccchheeccccccccccccccccc--------cccc---------cccccccc
Confidence 666666666666532 22334455666666666666542211111000 0000 00001123
Q ss_pred CCCCceEeccCCcccCC----CccccccCCCCcEEECCCCcCccc-----cCcccCCCCCCcEEeCCCCccccc----CC
Q 036117 490 GGNLIYLTANVNKLVGP----IPESLWNCTGLTRVRLEQNRLDGD-----ITNALGIYPDLQYIDLGDNQLSGV----LT 556 (641)
Q Consensus 490 ~~~L~~L~l~~n~~~~~----~~~~l~~~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~Ls~n~~~~~----~~ 556 (641)
.+.|+.+.+++|++... +...+..++.|++|++++|++... +...+..++.|+.|++++|.++.. +.
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 34555555555554321 222345566677777777766532 233455667777777777776543 23
Q ss_pred hhhhcCCCCCEEeCcCCcCcccCC----ccccC--CCCCCEEeCCCCcCccc----CCcccc-CCCCCCEEeCcCCCCcc
Q 036117 557 SNWGKCTNLSNFRISGNRIKGGIP----AELGN--LTYLQNLDIFDNQLTGK----IPAQLF-RSSFLIRLNLRRNQLSD 625 (641)
Q Consensus 557 ~~~~~l~~L~~L~L~~n~l~~~~p----~~l~~--l~~L~~L~L~~n~l~~~----ip~~l~-~~~~L~~l~l~~n~l~~ 625 (641)
..+..++.|++|++++|.+.+... ..+.. .+.|++|++++|++... +...+. .++.|+.|++++|.+..
T Consensus 237 ~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 445666777777777777654322 22222 35677788888877543 223332 45677788888877753
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.7e-15 Score=127.49 Aligned_cols=127 Identities=13% Similarity=0.091 Sum_probs=88.9
Q ss_pred ccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCC
Q 036117 487 ICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLS 566 (641)
Q Consensus 487 ~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~ 566 (641)
+.++..+++|++++|++. .++..+..+++|+.|++++|++... ..+..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 456667788888888876 4455556677888888888877743 3467778888888888887766665666778888
Q ss_pred EEeCcCCcCcccCC-ccccCCCCCCEEeCCCCcCcccCCc----cccCCCCCCEEe
Q 036117 567 NFRISGNRIKGGIP-AELGNLTYLQNLDIFDNQLTGKIPA----QLFRSSFLIRLN 617 (641)
Q Consensus 567 ~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~ip~----~l~~~~~L~~l~ 617 (641)
.|++++|++..... ..+..+++|++|++++|+++ ..|. .+..+++|+.||
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 88888887763211 35677778888888888776 3442 355667777766
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1e-14 Score=127.08 Aligned_cols=113 Identities=19% Similarity=0.139 Sum_probs=66.6
Q ss_pred CCCCCCCCCEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCC
Q 036117 83 DFSAFPNLTALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNA 162 (641)
Q Consensus 83 ~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 162 (641)
.+.+...+|+|+|++|+++. ++..+..+++|++|++++|.++. + +.+..+++|++|++++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-c-CCcccCcchhhhhcccccccCCCcccccccccc
Confidence 35556667777777777763 35555667777777777777663 3 246666777777777777665444445556666
Q ss_pred cEEEeccccCCCCCC-cccCCCCCCCEEEcCCCCCCC
Q 036117 163 WLLRIGANYLEDPDP-VKFKGMASLTDLWLDYNLLEK 198 (641)
Q Consensus 163 ~~L~l~~n~~~~~~~-~~l~~l~~L~~L~l~~~~~~~ 198 (641)
++|++++|++.+... ..+..+++|++|++++|++..
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ccceeccccccccccccccccccccchhhcCCCcccc
Confidence 666666666554322 334444444444444444433
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.49 E-value=7.7e-15 Score=146.09 Aligned_cols=249 Identities=20% Similarity=0.183 Sum_probs=132.6
Q ss_pred CCCCCCCCEEEccCccccccC----chhhhcCCCCCeEeCCcccccccceeecccccccccCCcCCCCCCCCCEEEccCC
Q 036117 324 LGFCANLTFLELSINNLTGSL----PLSLASLRQISELGISNNQLSEIISLQLQMNDLSGKLPPEIGLLPKLEYLYLFDN 399 (641)
Q Consensus 324 l~~~~~L~~L~l~~n~l~~~~----~~~l~~~~~L~~L~l~~n~~~~l~~l~l~~~~l~~~~~~~l~~~~~L~~L~L~~n 399 (641)
+.....+++|++++|.+.... ...+...+.|+.++++++........ .......+...+..+++|++|++++|
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~---~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDE---IPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGG---SHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccc---cchHHHHHHHHHhhCCCccccccccc
Confidence 444566667777766665432 23344556777777666543321100 00000012234566789999999999
Q ss_pred cCcCC----chhhhhCCCCCCeEecccCcCCccCccc-------------ccCCCCCCEEEccCCcCcccCCc----chh
Q 036117 400 KFSGP----IPQQIGNLTNLFDLQLANNFFNGSIPST-------------IGNLSSLVKLSLSSNQLTGTLPP----EIG 458 (641)
Q Consensus 400 ~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------l~~l~~L~~L~ls~n~l~~~~~~----~~~ 458 (641)
.+++. +...+..+++|++|++++|.+....... ....+.|+.+++++|.+...... .+.
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~ 183 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhh
Confidence 98865 3344567899999999999875321111 12456777777777766532211 122
Q ss_pred cCCCCCCCCCccEEEccCCcccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccc----cCcc
Q 036117 459 NSKSDFGPRFLRNVSFSYNNFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGD----ITNA 534 (641)
Q Consensus 459 ~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~----~~~~ 534 (641)
... .+++|++++|.++.... ...+...+..+++|+.|++++|++... +...
T Consensus 184 ~~~------~L~~L~L~~n~i~~~g~-------------------~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 184 SHR------LLHTVKMVQNGIRPEGI-------------------EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 238 (344)
T ss_dssp HCT------TCCEEECCSSCCCHHHH-------------------HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred hhh------hhccccccccccccccc-------------------ccchhhhhcchhhhccccccccccccccccccccc
Confidence 222 45555555555432100 000122344555666666666655422 2334
Q ss_pred cCCCCCCcEEeCCCCcccccCChhh----hc--CCCCCEEeCcCCcCccc----CCcccc-CCCCCCEEeCCCCcCc
Q 036117 535 LGIYPDLQYIDLGDNQLSGVLTSNW----GK--CTNLSNFRISGNRIKGG----IPAELG-NLTYLQNLDIFDNQLT 600 (641)
Q Consensus 535 ~~~l~~L~~L~Ls~n~~~~~~~~~~----~~--l~~L~~L~L~~n~l~~~----~p~~l~-~l~~L~~L~L~~n~l~ 600 (641)
+..+++|++|++++|.+++.....+ .. .+.|++|++++|.+... +...+. +.++|+.|+|++|.+.
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 4556666666666666654322222 21 24566666666665432 222232 4566777777777664
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45 E-value=2.3e-13 Score=112.30 Aligned_cols=79 Identities=28% Similarity=0.348 Sum_probs=39.2
Q ss_pred CEEECCCCCCCccCchhccCCCCCCEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEEEeccc
Q 036117 91 TALNLNMNNLVGSIPAGIGNATKLILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLLRIGAN 170 (641)
Q Consensus 91 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n 170 (641)
|+|+|++|+++ .++ .+..+++|++|++++|.++ .+|..++.+++|++|++++|.+++. | .+..+++|+++++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCC
Confidence 34555555554 222 2455555555555555555 3444455555555555555555422 2 2444444444444444
Q ss_pred cCCC
Q 036117 171 YLED 174 (641)
Q Consensus 171 ~~~~ 174 (641)
++.+
T Consensus 76 ~i~~ 79 (124)
T d1dcea3 76 RLQQ 79 (124)
T ss_dssp CCCS
T ss_pred ccCC
Confidence 4443
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45 E-value=3e-13 Score=111.66 Aligned_cols=101 Identities=27% Similarity=0.371 Sum_probs=75.0
Q ss_pred CEEECCCCcCCCCCccccCCCCCCCEEEcccccCCCCCChhccCCCCCcEEEeccccCCCCCCcccCCCCCCCEEEcCCC
Q 036117 115 ILLDLSSNNLTNPIPPEIGYLSDLRVLLLYNNSLTGQIPHQLSNLQNAWLLRIGANYLEDPDPVKFKGMASLTDLWLDYN 194 (641)
Q Consensus 115 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~~ 194 (641)
|+|++++|.++ .++ .++.+++|++|++++|+++ .+|..+..+++|++|++++|.+++.. .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccccC--ccccccccCeEECCCC
Confidence 57889999888 444 4788888899999888887 46777888888888888888887653 4677777777777777
Q ss_pred CCCCCch--hhcCCCCCcEEEeeCCcCC
Q 036117 195 LLEKFPS--FIAECSKLMFLDLSDNLIM 220 (641)
Q Consensus 195 ~~~~l~~--~l~~~~~L~~L~l~~~~~~ 220 (641)
.+..++. .+..+++|++|++++|.+.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 7766552 4566666677776666654
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.27 E-value=5.7e-14 Score=126.78 Aligned_cols=144 Identities=22% Similarity=0.189 Sum_probs=88.6
Q ss_pred CccEEEccCC--cccccCCccccCCCCCceEeccCCcccCCCccccccCCCCcEEECCCCcCccccCcccCCCCCCcEEe
Q 036117 468 FLRNVSFSYN--NFSGKLPPGICRGGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYID 545 (641)
Q Consensus 468 ~L~~L~ls~n--~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 545 (641)
..+.+++.+. .+. .++..+..+++|+.|++++|++. .++ .+..+++|+.|++++|.+.. ++.....++.|+.|+
T Consensus 24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~ 99 (198)
T d1m9la_ 24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELW 99 (198)
T ss_dssp TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEE
T ss_pred ccceeeeecccCchh-hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhccccccc-ccccccccccccccc
Confidence 3555665543 122 34556667777777777777776 333 46677777777777777653 343344455677777
Q ss_pred CCCCcccccCChhhhcCCCCCEEeCcCCcCcccCC-ccccCCCCCCEEeCCCCcCcccCCcc----------ccCCCCCC
Q 036117 546 LGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIP-AELGNLTYLQNLDIFDNQLTGKIPAQ----------LFRSSFLI 614 (641)
Q Consensus 546 Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~ip~~----------l~~~~~L~ 614 (641)
+++|+++.. ..+..+++|+.|++++|+++.... ..+..+++|+.|++++|++....+.. +..+++|+
T Consensus 100 l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~ 177 (198)
T d1m9la_ 100 ISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLK 177 (198)
T ss_dssp CSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCC
T ss_pred ccccccccc--ccccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcC
Confidence 777777643 346667777777777777763211 34667777777777777765433321 34456666
Q ss_pred EEe
Q 036117 615 RLN 617 (641)
Q Consensus 615 ~l~ 617 (641)
.||
T Consensus 178 ~LD 180 (198)
T d1m9la_ 178 KLD 180 (198)
T ss_dssp EES
T ss_pred EeC
Confidence 655
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.4e-11 Score=105.95 Aligned_cols=144 Identities=15% Similarity=0.025 Sum_probs=94.6
Q ss_pred CCCCceEeccCCcccCCCccccccCCCCcEEECCCC-cCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEE
Q 036117 490 GGNLIYLTANVNKLVGPIPESLWNCTGLTRVRLEQN-RLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNF 568 (641)
Q Consensus 490 ~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L 568 (641)
+...+.++.+++++. ..|..+..+++|++|++++| .+....+..|..+++|+.|++++|+++...+.+|..+++|++|
T Consensus 7 c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L 85 (156)
T d2ifga3 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL 85 (156)
T ss_dssp CSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE
T ss_pred cCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccce
Confidence 334455666666655 45566777788888888765 4776666778888888888888888888778888888888888
Q ss_pred eCcCCcCcccCCccccCCCCCCEEeCCCCcCcccC-CccccCCCCCCEEeCcCCCCcccCcccccCCC
Q 036117 569 RISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKI-PAQLFRSSFLIRLNLRRNQLSDKIPAEIGKLS 635 (641)
Q Consensus 569 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~i-p~~l~~~~~L~~l~l~~n~l~~~~p~~~~~l~ 635 (641)
+|++|+++...+..+.. .+|+.|+|++|++...- -.++..+.......+..+++.-.-|..+..++
T Consensus 86 ~Ls~N~l~~l~~~~~~~-~~l~~L~L~~Np~~C~C~~~~l~~~~~~~~~~~~~~~~~C~~p~~l~~~p 152 (156)
T d2ifga3 86 NLSFNALESLSWKTVQG-LSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMP 152 (156)
T ss_dssp ECCSSCCSCCCSTTTCS-CCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSCCC
T ss_pred eccCCCCcccChhhhcc-ccccccccCCCcccCCchHHHHHHHHHhccCccCcCCcEECcChHHCcCC
Confidence 88888888444444444 46888888888885211 11222222222334445566555665555554
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.9e-11 Score=105.15 Aligned_cols=103 Identities=22% Similarity=0.120 Sum_probs=50.4
Q ss_pred EEECCCCcCCCCCccccCCCCCCCEEEcccc-cCCCCCChhccCCCCCcEEEeccccCCCCCCcccCCCCCCCEEEcCCC
Q 036117 116 LLDLSSNNLTNPIPPEIGYLSDLRVLLLYNN-SLTGQIPHQLSNLQNAWLLRIGANYLEDPDPVKFKGMASLTDLWLDYN 194 (641)
Q Consensus 116 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n-~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~~ 194 (641)
.++.+++.+. ..|..+..+++|++|+++++ .++...+..|.++++|+.|++++|+++.+.+..|.++++|++|++++|
T Consensus 12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 3444444433 23334444444555554433 244333344555555555555555555555555555555555555555
Q ss_pred CCCCCchhhcCCCCCcEEEeeCCcC
Q 036117 195 LLEKFPSFIAECSKLMFLDLSDNLI 219 (641)
Q Consensus 195 ~~~~l~~~l~~~~~L~~L~l~~~~~ 219 (641)
.+..+|.......+|++|++++|.+
T Consensus 91 ~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 91 ALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred CCcccChhhhccccccccccCCCcc
Confidence 5555554444444566666666655
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=3.2e-13 Score=121.77 Aligned_cols=109 Identities=22% Similarity=0.225 Sum_probs=48.1
Q ss_pred ccccCCCCcEEECCCCcCccccCcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCCccccCCCCC
Q 036117 510 SLWNCTGLTRVRLEQNRLDGDITNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYL 589 (641)
Q Consensus 510 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 589 (641)
.+..+++|++|++++|.+... + .+..+++|+.|++++|+++. ++.....+++|++|++++|+++.. ..+..+++|
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~L 117 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL--SGIEKLVNL 117 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH--HHHHHHHHS
T ss_pred HHhcccccceeECcccCCCCc-c-cccCCccccChhhccccccc-cccccccccccccccccccccccc--ccccccccc
Confidence 344445555555555544421 1 24444455555555554442 222233334455555555544421 224444445
Q ss_pred CEEeCCCCcCcccCC--ccccCCCCCCEEeCcCCCCc
Q 036117 590 QNLDIFDNQLTGKIP--AQLFRSSFLIRLNLRRNQLS 624 (641)
Q Consensus 590 ~~L~L~~n~l~~~ip--~~l~~~~~L~~l~l~~n~l~ 624 (641)
+.|++++|+++ .++ ..+..+++|+.|++++|++.
T Consensus 118 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 118 RVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEESEEECC-CHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccccccchhc-cccccccccCCCccceeecCCCccc
Confidence 55555555444 222 23444445555555555444
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44 E-value=1e-08 Score=88.43 Aligned_cols=82 Identities=27% Similarity=0.261 Sum_probs=47.1
Q ss_pred CCCCCCcEEeCCCCcccccC--ChhhhcCCCCCEEeCcCCcCcccCCccccCCCCCCEEeCCCCcCcccCCcc-------
Q 036117 536 GIYPDLQYIDLGDNQLSGVL--TSNWGKCTNLSNFRISGNRIKGGIPAELGNLTYLQNLDIFDNQLTGKIPAQ------- 606 (641)
Q Consensus 536 ~~l~~L~~L~Ls~n~~~~~~--~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ip~~------- 606 (641)
..++.|++|++++|+++... +..+..+++|+.|++++|.++...+-.......|++|++++|++.+.....
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 45667777777777766432 344566677777777777776432222233345677777777766443321
Q ss_pred ccCCCCCCEEe
Q 036117 607 LFRSSFLIRLN 617 (641)
Q Consensus 607 l~~~~~L~~l~ 617 (641)
+..+++|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 33456666554
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=4.7e-08 Score=84.05 Aligned_cols=84 Identities=21% Similarity=0.204 Sum_probs=58.3
Q ss_pred ccccCCCCcEEECCCCcCcccc--CcccCCCCCCcEEeCCCCcccccCChhhhcCCCCCEEeCcCCcCcccCCc------
Q 036117 510 SLWNCTGLTRVRLEQNRLDGDI--TNALGIYPDLQYIDLGDNQLSGVLTSNWGKCTNLSNFRISGNRIKGGIPA------ 581 (641)
Q Consensus 510 ~l~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~------ 581 (641)
....++.|++|++++|+++... +..+..+++|+.|++++|.++...+-.......|+.|++++|++......
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHH
Confidence 3456778888888888887532 34456788888888888888865443334455688888888888755432
Q ss_pred -cccCCCCCCEEe
Q 036117 582 -ELGNLTYLQNLD 593 (641)
Q Consensus 582 -~l~~l~~L~~L~ 593 (641)
.+..+|+|+.||
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 256678888875
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.85 E-value=6.1e-06 Score=70.77 Aligned_cols=109 Identities=11% Similarity=0.123 Sum_probs=61.8
Q ss_pred CCCCcEEECCCC-cCccc----cCcccCCCCCCcEEeCCCCccccc----CChhhhcCCCCCEEeCcCCcCccc----CC
Q 036117 514 CTGLTRVRLEQN-RLDGD----ITNALGIYPDLQYIDLGDNQLSGV----LTSNWGKCTNLSNFRISGNRIKGG----IP 580 (641)
Q Consensus 514 ~~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~Ls~n~~~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p 580 (641)
.++|++|+|+++ .+... +...+...+.|++|+|++|.+... +.+.+...++|++|+|++|.+.+. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 455666666653 34322 233455566677777777766532 223444556777777777776532 22
Q ss_pred ccccCCCCCCEEeCCCCcCcc---c----CCccccCCCCCCEEeCcCCC
Q 036117 581 AELGNLTYLQNLDIFDNQLTG---K----IPAQLFRSSFLIRLNLRRNQ 622 (641)
Q Consensus 581 ~~l~~l~~L~~L~L~~n~l~~---~----ip~~l~~~~~L~~l~l~~n~ 622 (641)
..+...++|++|++++|.+.. . +...+...++|+.|+++.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 345556777777777765431 1 23344455777777776654
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.65 E-value=1.7e-05 Score=67.90 Aligned_cols=13 Identities=15% Similarity=-0.077 Sum_probs=6.6
Q ss_pred CCCCCCEEeCCCC
Q 036117 585 NLTYLQNLDIFDN 597 (641)
Q Consensus 585 ~l~~L~~L~L~~n 597 (641)
..++|+.|+++.+
T Consensus 129 ~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 129 ENESLLRVGISFA 141 (167)
T ss_dssp HCSSCCEEECCCC
T ss_pred hCCCccEeeCcCC
Confidence 3455555555444
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.40 E-value=4.1e-05 Score=65.41 Aligned_cols=112 Identities=18% Similarity=0.183 Sum_probs=69.0
Q ss_pred ccCCCCcEEECCC-CcCccc----cCcccCCCCCCcEEeCCCCcccccC----ChhhhcCCCCCEEeCcCCcCccc----
Q 036117 512 WNCTGLTRVRLEQ-NRLDGD----ITNALGIYPDLQYIDLGDNQLSGVL----TSNWGKCTNLSNFRISGNRIKGG---- 578 (641)
Q Consensus 512 ~~~~~L~~L~l~~-n~l~~~----~~~~~~~l~~L~~L~Ls~n~~~~~~----~~~~~~l~~L~~L~L~~n~l~~~---- 578 (641)
.+.++|++|++++ +.++.. +...+...+.|++|++++|.++... ...+...++++.+++++|.+...
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 3456677777776 345322 2344556777888888887766432 23445567788888888776432
Q ss_pred CCccccCCCCCCEEeC--CCCcCccc----CCccccCCCCCCEEeCcCCCC
Q 036117 579 IPAELGNLTYLQNLDI--FDNQLTGK----IPAQLFRSSFLIRLNLRRNQL 623 (641)
Q Consensus 579 ~p~~l~~l~~L~~L~L--~~n~l~~~----ip~~l~~~~~L~~l~l~~n~l 623 (641)
+...+...++|+.++| ++|.+... +...+...+.|+.|+++.++.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 2345566677876544 45666432 344455678888888877654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.08 E-value=3.4e-05 Score=65.97 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCCCCEEECCC-CCCCcc----CchhccCCCCCCEEECCCCcCCCC----CccccCCCCCCCEEEcccccCC
Q 036117 86 AFPNLTALNLNM-NNLVGS----IPAGIGNATKLILLDLSSNNLTNP----IPPEIGYLSDLRVLLLYNNSLT 149 (641)
Q Consensus 86 ~l~~L~~L~L~~-n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~~~ 149 (641)
+.+.|++|++++ +.++.. +..++...++|++|++++|.++.. +...+...+.++.+++++|.+.
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 445666666665 334322 223344556666666666655432 1122233445555555555443
Done!