BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036128
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 27/235 (11%)
Query: 22 DGTVERLAGTEVAAAGLDPATN--VLSKDVLIIPETGVSARVYRPSNI---TNKVPLVVY 76
D T+ R AA DP ++ VL+KD+ + P R++ P + + K+PLVVY
Sbjct: 29 DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVY 88
Query: 77 FHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVAS 136
FHGG F++ S+A +H + A +++ SV+YRLAPEH LPAA++D++ AL+W+
Sbjct: 89 FHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKD 148
Query: 137 HAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLR---IKDEVRDLK 193
+++ WL F DF F+ G+SAG +IA++ GLR + DE+ LK
Sbjct: 149 ---------------SRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLK 193
Query: 194 ILGIVMIMPYFWGKKPIGVEVT----DQFRKQMVDNWWLFVCPSDKGCDDPLINP 244
I G+V+ P F G K G E+ + ++D W P D NP
Sbjct: 194 IKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNP 248
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 43/248 (17%)
Query: 22 DGTVERLAGTEV---AAAGLDPATNVLSKDVLIIPETGVSARVYRPSNITNK-------- 70
DGT R + A +P V S DVLI + +RVYRP+ +
Sbjct: 45 DGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDL 104
Query: 71 --------VPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPA 122
VP++++FHGG+F +S+ Y T LV +VVSVNYR APE+P P
Sbjct: 105 EKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPC 164
Query: 123 AFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFD-KVFLAGDSAGSSIAHYL 181
A++D AL WV N +WL+ D +FLAGDS+G +IAH +
Sbjct: 165 AYDDGWIALNWV-----------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207
Query: 182 GLRIKDEVRDLKILGIVMIMPYFWGKKPIGVEVTDQFRKQMV----DNWWLFVCPSDKGC 237
LR + + +LG +++ P F G + E + + + D +W P +
Sbjct: 208 ALRAGES--GIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDR 265
Query: 238 DDPLINPL 245
+ P NP
Sbjct: 266 EHPACNPF 273
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 58/259 (22%)
Query: 22 DGTVERLAGTEV---AAAGLDPATNVLSKDVLIIPETGVSARVYRPSN----------IT 68
DGT ER G + A P V S D +I G+ R+YR + +T
Sbjct: 37 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVT 96
Query: 69 NKV-------------PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLA 115
+ P++++FHGG+FV +S++ Y + V + +VVSVNYR A
Sbjct: 97 RPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRA 156
Query: 116 PEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGS 175
PEH P A++D ALKWV S +P +A R VFL+GDS+G
Sbjct: 157 PEHRYPCAYDDGWTALKWVMS---------QPFMRSGGDAQAR-------VFLSGDSSGG 200
Query: 176 SIAHYLGLRIKDEVRDLKILGIVMIMPYFWGKKPIGVEVTDQFRK---------QMVDNW 226
+IAH++ +R DE +K+ G +++ F G E T+ R+ Q D +
Sbjct: 201 NIAHHVAVRAADE--GVKVCGNILLNAMFG-----GTERTESERRLDGKYFVTLQDRDWY 253
Query: 227 WLFVCPSDKGCDDPLINPL 245
W P D D P NP
Sbjct: 254 WKAYLPEDADRDHPACNPF 272
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 50 LIIPETG--VSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIV 107
+ IP G + ARVYRP + ++P VVY+HGG FV+ S + L + +V
Sbjct: 54 ITIPGRGGPIRARVYRPRD-GERLPAVVYYHGGGFVLGSVE--THDHVCRRLANLSGAVV 110
Query: 108 VSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVF 167
VSV+YRLAPEH PAA ED+ A KWVA + G VD K+
Sbjct: 111 VSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLG------------------VDNGKIA 152
Query: 168 LAGDSAGSSIAHYLGLRIKDE 188
+AGDSAG ++A + +D
Sbjct: 153 VAGDSAGGNLAAVTAIMARDR 173
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 25/130 (19%)
Query: 52 IPETG--VSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAE-ADIIVV 108
IP +G + ARVY P +P V+Y+HGG FV S + H + ++ +D +VV
Sbjct: 53 IPVSGGSIRARVYFPKKAAG-LPAVLYYHGGGFVFGSI---ETHDHICRRLSRLSDSVVV 108
Query: 109 SVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFL 168
SV+YRLAPE+ P A ED+ ALKWVA A G VD D++ +
Sbjct: 109 SVDYRLAPEYKFPTAVEDAYAALKWVADRADELG------------------VDPDRIAV 150
Query: 169 AGDSAGSSIA 178
AGDSAG ++A
Sbjct: 151 AGDSAGGNLA 160
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 23/132 (17%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAE-ADIIVVSVNYRLAPEHPLPAAFEDSLGA 130
P++VY+HGG FVI S + H +L +A ++ VVSV+YRLAPEH PAA D A
Sbjct: 80 PVLVYYHGGGFVICSI---ESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDA 136
Query: 131 LKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVR 190
KWVA +A+ LR +D K+F+ GDSAG ++A + + +D
Sbjct: 137 TKWVAENAEE----------------LR--IDPSKIFVGGDSAGGNLAAAVSIMARDSGE 178
Query: 191 DLKILGIVMIMP 202
D I ++I P
Sbjct: 179 DF-IKHQILIYP 189
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 24/129 (18%)
Query: 52 IPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVA-EADIIVVSV 110
+P + R+YRP + P +VY+HGG++V+ D + H + ++A + +V SV
Sbjct: 55 LPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVG---DLETHDPVCRVLAKDGRAVVFSV 111
Query: 111 NYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREF-VDFDKVFLA 169
+YRLAPEH PAA ED+ AL+W+A A +F +D ++ +
Sbjct: 112 DYRLAPEHKFPAAVEDAYDALQWIAERAA-------------------DFHLDPARIAVG 152
Query: 170 GDSAGSSIA 178
GDSAG ++A
Sbjct: 153 GDSAGGNLA 161
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 24/129 (18%)
Query: 52 IPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVA-EADIIVVSV 110
+P + R+YRP + P +VY+HGG +V+ D + H + ++A + +V SV
Sbjct: 55 LPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVG---DLETHDPVCRVLAKDGRAVVFSV 111
Query: 111 NYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREF-VDFDKVFLA 169
+YRLAPEH PAA ED+ AL+W+A A +F +D ++ +
Sbjct: 112 DYRLAPEHKFPAAVEDAYDALQWIAERAA-------------------DFHLDPARIAVG 152
Query: 170 GDSAGSSIA 178
GDSAG ++A
Sbjct: 153 GDSAGGNLA 161
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 24/129 (18%)
Query: 52 IPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVA-EADIIVVSV 110
+P + R YRP + P +VY+HGG +V+ D + H + ++A + +V SV
Sbjct: 55 LPGRTLKVRXYRPEGVEPPYPALVYYHGGGWVVG---DLETHDPVCRVLAKDGRAVVFSV 111
Query: 111 NYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREF-VDFDKVFLA 169
+YRLAPEH PAA ED+ AL+W+A A +F +D ++ +
Sbjct: 112 DYRLAPEHKFPAAVEDAYDALQWIAERAA-------------------DFHLDPARIAVG 152
Query: 170 GDSAGSSIA 178
GDSAG ++A
Sbjct: 153 GDSAGGNLA 161
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLIIP--ETGVSARVYRPSNITNKVPLVVYFHGGA 81
+VE + + L P V + + IP ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKT-QGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV +
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYN--- 153
Query: 140 GEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVM 199
N E + ++ + + GDSAG ++A + K E ++K+ V+
Sbjct: 154 ------------NSEKFNGKY----GIAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLIIP--ETGVSARVYRPSNITNKVPLVVYFHGGA 81
+VE + + L P V + + IP ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKT-QGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV +
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYN--- 153
Query: 140 GEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVM 199
N E + ++ + + GDSAG ++A + K E ++K+ V+
Sbjct: 154 ------------NSEKFNGKY----GIAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLIIP--ETGVSARVYRPSNITNKVPLVVYFHGGA 81
+VE + + L P V + + IP ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKT-QGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV +
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYN--- 153
Query: 140 GEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVM 199
N E + ++ + + GDSAG ++A + K E ++K+ V+
Sbjct: 154 ------------NSEKFNGKY----GIAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 24 TVERLAGTEVAAAGLDPATNVLSKDVLIIP--ETGVSARVYRPSNITNKVPLVVYFHGGA 81
+VE + + L P V + + IP ET + ARVY P ++VY+HGG
Sbjct: 42 SVEEIRSLFKQFSSLTPREEVGKIEDITIPGSETNIKARVYYPKT-QGPYGVLVYYHGGG 100
Query: 82 FVIA--SSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAK 139
FV+ S DP N+ + +SV+YRLAPE+ PAA DS ALKWV +
Sbjct: 101 FVLGDIESYDPLCRAITNS----CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYN--- 153
Query: 140 GEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVM 199
N E + ++ + + GDSAG ++A + K E ++K+ V+
Sbjct: 154 ------------NSEKFNGKY----GIAVGGDSAGGNLAAVTAILSKKE--NIKLKYQVL 195
Query: 200 IMP 202
I P
Sbjct: 196 IYP 198
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 57 VSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAP 116
V R+YR + P+VVY H G F + + D + L L A VVSV+YRLAP
Sbjct: 73 VPVRIYRAA--PTPAPVVVYCHAGGFALGN-LDTDHRQCLE-LARRARCAVVSVDYRLAP 128
Query: 117 EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPV 150
EHP PAA D++ L WV +A G R L V
Sbjct: 129 EHPYPAALHDAIEVLTWVVGNATRLGFDARRLAV 162
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 46 SKDVLIIPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADI 105
++ +L + ++ V+RP+ + +P +VY HGG I ++ D + H +A A
Sbjct: 84 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTT-DNRVHRRWCTDLAAAGS 142
Query: 106 IVVSVNYRLA----PEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFV 161
+VV V++R A HP P+ ED L A+ WV H RE +
Sbjct: 143 VVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEH--------------------RESL 182
Query: 162 DFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVMIMPYFWG 206
V + G+S G ++A L K R I G+ +PY G
Sbjct: 183 GLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLN-NLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALK 132
++YFHGG ++ S P H L L ++ + S++YRLAPE+P PAA +D + A +
Sbjct: 97 ILYFHGGGYI---SGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 153
Query: 133 WVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDL 192
A L+ D++ +AGDSAG + L+ K++ +
Sbjct: 154 ----------------------ALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPM 191
Query: 193 KILGIVMIMPY 203
G+VM+ P+
Sbjct: 192 PA-GLVMLSPF 201
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLN-NLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALK 132
++YFHGG ++ S P H L L ++ + S++YRLAPE+P PAA +D + A +
Sbjct: 83 ILYFHGGGYI---SGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 139
Query: 133 WVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYLGLRIKDEVRDL 192
A L+ D++ +AGDSAG + L+ K++ +
Sbjct: 140 ----------------------ALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPM 177
Query: 193 KILGIVMIMPY 203
G+VM+ P+
Sbjct: 178 PA-GLVMLSPF 187
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 57 VSARVYRPSNITNKVPLVVYFHGGAFVI--ASSADPKYHTSLNNLVAEADIIVVSVNYRL 114
V R P N VP++++ HGG F I A S+DP + E V +V YRL
Sbjct: 65 VKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPF----CVEVARELGFAVANVEYRL 120
Query: 115 APEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAG 174
APE P D AL ++ +HA+ G +D ++ + G SAG
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELG------------------IDPSRIAVGGQSAG 162
Query: 175 SSIAHYLGLRIKDE 188
+A L+ +DE
Sbjct: 163 GGLAAGTVLKARDE 176
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 57 VSARVYRPSNITNKVPLVVYFHGGAFVI--ASSADPKYHTSLNNLVAEADIIVVSVNYRL 114
V R P N VP++++ HGG F I A S+DP + E V +V YRL
Sbjct: 65 VKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPF----CVEVARELGFAVANVEYRL 120
Query: 115 APEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAG 174
APE P D AL ++ +HA+ G +D ++ + G SAG
Sbjct: 121 APETTFPGPVNDCYAALLYIHAHAEELG------------------IDPSRIAVGGQSAG 162
Query: 175 SSIAHYLGLRIKDE 188
+A L+ +DE
Sbjct: 163 GGLAAGTVLKARDE 176
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 32/135 (23%)
Query: 61 VYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAP---- 116
V+ P + +P++V+ HGGAF + + ++P Y S L A+ ++IVV++NYRL P
Sbjct: 87 VFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--KLAAQGEVIVVTLNYRLGPFGFM 144
Query: 117 -EHPLPAAFEDSLG------ALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLA 169
A+ D+LG ALKWV + G D D V +
Sbjct: 145 HLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG------------------DPDNVTVF 186
Query: 170 GDSAGS-SIAHYLGL 183
G+SAG SIA L +
Sbjct: 187 GESAGGMSIAALLAM 201
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 32/142 (22%)
Query: 54 ETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYR 113
E + V+ P + +P++V+ HGGAF + + ++P Y S L A+ ++IVV++NYR
Sbjct: 80 EDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--KLAAQGEVIVVTLNYR 137
Query: 114 LAP-----EHPLPAAFEDSLG------ALKWVASHAKGEGDGNRPLPVLNQEAWLREFVD 162
L P A+ D+LG ALKWV + G D
Sbjct: 138 LGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG------------------D 179
Query: 163 FDKVFLAGDSAGS-SIAHYLGL 183
D V + G+SAG SIA L +
Sbjct: 180 PDNVTVFGESAGGMSIAALLAM 201
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 32/142 (22%)
Query: 54 ETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYR 113
E + V+ P + +P++V+ HGGAF + + ++P Y S L A+ ++IVV++NYR
Sbjct: 80 EDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGS--KLAAQGEVIVVTLNYR 137
Query: 114 LAP-----EHPLPAAFEDSLG------ALKWVASHAKGEGDGNRPLPVLNQEAWLREFVD 162
L P A+ D+LG ALKWV + G D
Sbjct: 138 LGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG------------------D 179
Query: 163 FDKVFLAGDSAGS-SIAHYLGL 183
D V + G+SAG SIA L +
Sbjct: 180 PDNVTVFGESAGGMSIAALLAM 201
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLNNLVAEA-DIIVVSVNYRLAPEHPLPAAFEDSLGALK 132
++Y HGG +V+ S H S+ ++ A + ++YRLAPEHP PAA ED + A +
Sbjct: 83 ILYLHGGGYVMGSI---NTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 139
Query: 133 WV 134
W+
Sbjct: 140 WL 141
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 74 VVYFHGGAFVIASSADPKYHTSLNNLVAEA-DIIVVSVNYRLAPEHPLPAAFEDSLGALK 132
++Y HGG +V+ S H S+ ++ A + ++YRLAPEHP PAA ED + A +
Sbjct: 70 ILYLHGGGYVMGSI---NTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 126
Query: 133 WV 134
W+
Sbjct: 127 WL 128
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 54 ETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYR 113
E G+ ++ P+ K P++ + HGGAF+ S + P Y + D++VV++NYR
Sbjct: 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTA--FAKHGDVVVVTINYR 139
Query: 114 LAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEA---WLREFV-----DFDK 165
+ + G L S + L +L+Q A W++E + D D
Sbjct: 140 M-----------NVFGFLHLGDSFGEAYAQAGN-LGILDQVAALRWVKENIAAFGGDPDN 187
Query: 166 VFLAGDSAGSS 176
+ + G+SAG++
Sbjct: 188 ITIFGESAGAA 198
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 54 ETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYR 113
E G+ ++ P+ K P++ + HGGAF+ S + P Y + D++VV++NYR
Sbjct: 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTA--FAKHGDVVVVTINYR 139
Query: 114 LAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEA---WLREFV-----DFDK 165
+ + G L S + L +L+Q A W++E + D D
Sbjct: 140 M-----------NVFGFLHLGDSFGEAYAQAGN-LGILDQVAALRWVKENIAAFGGDPDN 187
Query: 166 VFLAGDSAGSS 176
+ + G+SAG++
Sbjct: 188 ITIFGESAGAA 198
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 33/152 (21%)
Query: 45 LSKDVLIIPETGVSARVYRPSNIT--NKVPLVVYFHGGAFVIASSAD-PKYHTSLNNLVA 101
++K + + E + V+RP+ K+P++V+ +GGAFV SSA P ++
Sbjct: 94 MAKGTVSMNEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINM 153
Query: 102 EADIIVVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPV 150
++ VS+NYR P E A D L+WV+ + G
Sbjct: 154 GQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGG------- 206
Query: 151 LNQEAWLREFVDFDKVFLAGDSAGS-SIAHYL 181
D DKV + G+SAG+ S+AH L
Sbjct: 207 -----------DPDKVMIFGESAGAMSVAHQL 227
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 30/122 (24%)
Query: 71 VPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRL---------APEHPLP 121
+P++V+ HGG F S D H + D+IV++ NYRL + P
Sbjct: 115 LPVLVFIHGGGFAFG-SGDSDLHGP--EYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGN 171
Query: 122 AAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVFLAGDSAGSSIAHYL 181
A D + LKWV +A G RP D V L G SAG++ H L
Sbjct: 172 AGLRDMVTLLKWVQRNA--HFFGGRP----------------DDVTLMGQSAGAAATHIL 213
Query: 182 GL 183
L
Sbjct: 214 SL 215
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 36/129 (27%)
Query: 64 PSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYR--------LA 115
P N TN +P++++ +GG F+ S+ Y+ + + A ++IV S YR LA
Sbjct: 134 PQNTTNGLPILIWIYGGGFMTGSATLDIYNADI--MAAVGNVIVASFQYRVGAFGFLHLA 191
Query: 116 PEHPLPAAFE--------DSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFVDFDKVF 167
PE P A E D A++W+ +A G GN W+ F
Sbjct: 192 PEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFG-GN--------PEWMTLF------- 235
Query: 168 LAGDSAGSS 176
G+SAGSS
Sbjct: 236 --GESAGSS 242
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 52 IPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAE-ADIIVVSV 110
P V+ R+Y P + + Y HGG F++ + H + L+A V+ +
Sbjct: 70 TPYGDVTTRLYSPQPTSQAT--LYYLHGGGFILGNL---DTHDRIXRLLARYTGCTVIGI 124
Query: 111 NYRLAPEHPLPAAFEDSLGALKWVASHA 138
+Y L+P+ P A E+++ + + HA
Sbjct: 125 DYSLSPQARYPQAIEETVAVCSYFSQHA 152
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 42 TNVLSKDVLIIPETGVSARVYRPSNIT--NKVPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L + E + +Y P+++T N++P++V+ HGG ++ +++ + L L
Sbjct: 79 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGLA-L 134
Query: 100 VAEADIIVVSVNYRL--------APEHPLPA-AFEDSLGALKWVASHAKGEGDGNRPLPV 150
A +++VV++ YRL EH D + AL+WV + G + +
Sbjct: 135 AAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTI 194
Query: 151 LNQEA 155
+ A
Sbjct: 195 FGESA 199
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 42 TNVLSKDVLIIPETGVSARVYRPSNIT--NKVPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L + E + +Y P+++T N++P++V+ HGG ++ +++ + L L
Sbjct: 84 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGLA-L 139
Query: 100 VAEADIIVVSVNYRLA 115
A +++VV++ YRL
Sbjct: 140 AAHENVVVVTIQYRLG 155
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 42 TNVLSKDVLIIPETGVSARVYRPSNIT--NKVPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L + E + +Y P+++T N++P++V+ HGG ++ +++ + L L
Sbjct: 82 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGLA-L 137
Query: 100 VAEADIIVVSVNYRLA 115
A +++VV++ YRL
Sbjct: 138 AAHENVVVVTIQYRLG 153
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 42 TNVLSKDVLIIPETGVSARVYRPSNIT--NKVPLVVYFHGGAFVIASSADPKYHTSLNNL 99
TN L + E + +Y P+++T N++P++V+ HGG ++ +++ + L L
Sbjct: 84 TNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAST---YDGLA-L 139
Query: 100 VAEADIIVVSVNYRLA 115
A +++VV++ YRL
Sbjct: 140 AAHENVVVVTIQYRLG 155
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 47/172 (27%)
Query: 44 VLSKDVLIIPETGVSARVYRPSNITNKVPLVVYFHGGAFVIASSAD--PKYHTSLNNLVA 101
V++KD +P T + A+ +P+ ++VY HGG + + D P+Y ++ L
Sbjct: 8 VITKDAFALPYTIIKAKN-QPTK-----GVIVYIHGGGLMFGKANDLSPQY---IDILTE 58
Query: 102 EADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLREFV 161
D+I +S YRL PE L ED + + S N P
Sbjct: 59 HYDLIQLS--YRLLPEVSLDCIIEDVYASFDAIQSQY-----SNCP-------------- 97
Query: 162 DFDKVFLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVMIMPYFWGKKPIGVE 213
+F G S+G+ YL L I RD I G++ F+G I E
Sbjct: 98 ----IFTFGRSSGA----YLSLLI---ARDRDIDGVID----FYGYSRINTE 134
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 51/183 (27%)
Query: 66 NITNKVPLVVYFHGGAFVIASSADPKYHTSLNN-------LVAEADIIVVSVNYRLAPEH 118
++ +P++++ +GGAF++ S + LNN + ++IVV+ NYR+ P
Sbjct: 93 QVSRDLPVMIWIYGGAFLMGSGHGANF---LNNYLYDGEEIATRGNVIVVTFNYRVGP-- 147
Query: 119 PLPAAFEDSLGALKWVASHAKGEGDGNRP--LPVLNQE---AWLREFV-----DFDKVFL 168
LG L GD N P + +Q AW++ + D D + L
Sbjct: 148 ---------LGFLS--------TGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPDNITL 190
Query: 169 AGDSAG------SSIAHYLGLRIKDEVRDLKIL---GIVMIMPYFWGKK---PIGVEVTD 216
G+SAG +++ Y I+ + + ++ P FW KK +G V D
Sbjct: 191 FGESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVAEKVGCPVGD 250
Query: 217 QFR 219
R
Sbjct: 251 AAR 253
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 33/124 (26%)
Query: 67 ITNKVPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIIVVSVNYRLAPEHPLPA 122
+++ +P++++ +GGAF++ +S + ++ + ++IVV+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNRP--LPVLNQE---AWLREFV-----DFDKVFLAGDS 172
LG L GD N P + +Q AW++ + D D++ L G+S
Sbjct: 148 -----LGFLS--------TGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGES 194
Query: 173 AGSS 176
AG +
Sbjct: 195 AGGA 198
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 33/124 (26%)
Query: 67 ITNKVPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIIVVSVNYRLAPEHPLPA 122
+++ +P++++ +GGAF++ +S + ++ + ++IVV+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNRP--LPVLNQE---AWLREFV-----DFDKVFLAGDS 172
LG L GD N P + +Q AW++ + D D + L G+S
Sbjct: 148 -----LGFLS--------TGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGES 194
Query: 173 AGSS 176
AG +
Sbjct: 195 AGGA 198
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 33/124 (26%)
Query: 67 ITNKVPLVVYFHGGAFVIASSADPKYHTSL----NNLVAEADIIVVSVNYRLAPEHPLPA 122
+++ +P++++ +GGAF++ +S + ++ + ++IVV+ NYR+ P
Sbjct: 94 VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP------ 147
Query: 123 AFEDSLGALKWVASHAKGEGDGNRP--LPVLNQE---AWLREFV-----DFDKVFLAGDS 172
LG L GD N P + +Q AW++ + D D + L G+S
Sbjct: 148 -----LGFLS--------TGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGES 194
Query: 173 AGSS 176
AG +
Sbjct: 195 AGGA 198
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 51/183 (27%)
Query: 66 NITNKVPLVVYFHGGAFVIASSADPKYHTSLNN-------LVAEADIIVVSVNYRLAPEH 118
++ +P++++ +GGAF++ S + LNN + ++IVV+ NYR+ P
Sbjct: 93 QVSRDLPVMIWIYGGAFLMGSGHGANF---LNNYLYDGEEIATRGNVIVVTFNYRVGP-- 147
Query: 119 PLPAAFEDSLGALKWVASHAKGEGDGNRP--LPVLNQE---AWLREFV-----DFDKVFL 168
LG L GD N P + +Q AW++ + D + + L
Sbjct: 148 ---------LGFLS--------TGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPNNITL 190
Query: 169 AGDSAG------SSIAHYLGLRIKDEVRDLKIL---GIVMIMPYFWGKK---PIGVEVTD 216
G+SAG +++ Y I+ + + ++ P FW KK +G V D
Sbjct: 191 FGESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVAEKVGCPVGD 250
Query: 217 QFR 219
R
Sbjct: 251 AAR 253
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 134 VASHAKGEGDGNRPLPVLNQEAWLREFVDFDKV-----------FLAGDSAGSSIAHYLG 182
VA+ +G GD +RP V + + + + D+V ++ G G+ +AH L
Sbjct: 55 VATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLA 114
Query: 183 LRIKDEVRDLKILGIVMIMPYFWGKKPIGVEVTDQFRKQMVDNWWLFVCPSD 234
L V+ L +L I + TDQ +W+ + P +
Sbjct: 115 LDHPHRVKKLALLDIAPTHKMY--------RTTDQEFATAYYHWFFLIQPDN 158
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGAL 131
P++VY HGG+++ + Y S+ L + ++IV++VNYR LG L
Sbjct: 150 PVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYR--------------LGVL 191
Query: 132 KWVASHAKGEGDGNRPLPVLNQEAWLREFVDFD-----KVFLAGDSAGSSIAHYLGL 183
++++ + L ++ W E + F ++ + G AG S + L L
Sbjct: 192 GFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 248
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 68 TNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDS 127
+ K P++++ HGG+++ + + S+ L A ++IVV++NYR
Sbjct: 135 SGKKPVMLFLHGGSYMEGTGN--MFDGSV--LAAYGNVIVVTLNYR-------------- 176
Query: 128 LGALKWVASHAKGEGDGNRPLPVLNQEAWLREFV-----DFDKVFLAGDSAGSSIAHYLG 182
LG L ++++ + L + WL E + D +++ + G AG+S + L
Sbjct: 177 LGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLI 236
Query: 183 LRIKDE 188
L E
Sbjct: 237 LSHHSE 242
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGAL 131
P++VY HGG+++ + Y S+ L + ++IV++VNYR LG L
Sbjct: 132 PVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYR--------------LGVL 173
Query: 132 KWVASHAKGEGDGNRPLPVLNQEAWLREFVDFD-----KVFLAGDSAGSSIAHYLGL 183
++++ + L ++ W E + F ++ + G AG S + L L
Sbjct: 174 GFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 230
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 72 PLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLA 115
P++VY HGG+++ + Y S+ L + ++IV++VNYRL
Sbjct: 145 PVMVYIHGGSYMEGTGN--LYDGSV--LASYGNVIVITVNYRLG 184
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 49 VLIIPETGVSARVYRP--SNITNKVPLVVYFHGGAFVIAS-SADPKYHTSLNNLVAEADI 105
VL E ++ V RP + +P++++ GG F I S + P +++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 106 IVVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQE 154
I V+VNYR+A E A +D ++WVA + G G
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGG----------- 198
Query: 155 AWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 -------DPSKVTIFGESAGS 212
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 32/141 (22%)
Query: 49 VLIIPETGVSARVYRP--SNITNKVPLVVYFHGGAFVIA-SSADPKYHTSLNNLVAEADI 105
VL E ++ V RP + + +P++++ GG F + SS P +++ +
Sbjct: 90 VLPNDEDCLTINVIRPPGTRASAGLPVMLWIFGGGFELGGSSLFPGDQMVAKSVLMGKPV 149
Query: 106 IVVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQE 154
I VS+NYR+A E A D A++WVA + G G
Sbjct: 150 IHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQWVADNIAGFGG----------- 198
Query: 155 AWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 -------DPSKVTIYGESAGS 212
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 49 VLIIPETGVSARVYRP--SNITNKVPLVVYFHGGAFVIAS-SADPKYHTSLNNLVAEADI 105
VL E ++ V RP + +P++++ GG F I S + P +++ I
Sbjct: 90 VLPQSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPI 149
Query: 106 IVVSVNYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQE 154
I V+VNYR+A E A +D ++WVA + G G
Sbjct: 150 IHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGG----------- 198
Query: 155 AWLREFVDFDKVFLAGDSAGS 175
D KV + G+SAGS
Sbjct: 199 -------DPSKVTIFGESAGS 212
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 69 NKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSL 128
+K P++VY HGG+++ + + L + ++IV+++NYR L
Sbjct: 133 SKKPVMVYIHGGSYMEGTGN----MIDGSILASYGNVIVITINYR--------------L 174
Query: 129 GALKWVASHAKGEGDGNRPLPVLNQEAWLREFV-----DFDKVFLAGDSAGSSIAHYLGL 183
G L ++++ + L + W+ E V D +V + G AG+S L L
Sbjct: 175 GILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTL 234
>pdb|1VKH|A Chain A, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
pdb|1VKH|B Chain B, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
Length = 273
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 69 NKVPLVVYFHGGAFVIASSADPKYHTSLNNLVA---EADIIVVSVNYRLAPEHPLPAAFE 125
N V+Y HGGA+ + ++ N + + E+ + S+ YRL+PE P
Sbjct: 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSXDTESTVCQYSIEYRLSPEITNPRNLY 98
Query: 126 DSLGAL 131
D++ +
Sbjct: 99 DAVSNI 104
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution
Length = 326
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 172 SAGSSIAHYLGLRIKDEVRDLKILGIVMIMPYF 204
S GS I+ + G+ + E +L ILG V I YF
Sbjct: 278 SEGSCISGFQGMNVPTESGELWILGDVFIRQYF 310
>pdb|4E14|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With Phenylmethylsulfonyl Fluoride
pdb|4E15|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
pdb|4E15|B Chain B, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
Length = 303
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 61 VYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPL 120
V+ TN+ PL V+ HGG + D S+ + V ++Y L P+ L
Sbjct: 72 VFYSEKTTNQAPLFVFVHGGYW---QEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL 128
Query: 121 PAAFEDSLGALKWVASHAK 139
L W+ + +
Sbjct: 129 EQLMTQFTHFLNWIFDYTE 147
>pdb|4E11|A Chain A, Crystal Structure Of Kynurenine Formamidase From
Drosophila Melanogaster
Length = 303
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 61 VYRPSNITNKVPLVVYFHGGAFVIASSADPKYHTSLNNLVAEADIIVVSVNYRLAPEHPL 120
V+ TN+ PL V+ HGG + D S+ + V ++Y L P+ L
Sbjct: 72 VFYSEKTTNQAPLFVFVHGGYW---QEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL 128
Query: 121 PAAFEDSLGALKWVASHAK 139
L W+ + +
Sbjct: 129 EQLMTQFTHFLNWIFDYTE 147
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 54 ETGVSARVYRP--SNITNKVPLVVYFHGGAF-VIASSADPKYHTSLNNLVAEADIIVVSV 110
E ++ V RP + +P++++ GG F V +S P ++ II VSV
Sbjct: 110 EDCLTINVVRPPGTKAGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSV 169
Query: 111 NYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEA 155
NYR++ E A +D ++WVA + G + + + A
Sbjct: 170 NYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFGGDPTKVTIFGESA 225
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 54 ETGVSARVYRP--SNITNKVPLVVYFHGGAF-VIASSADPKYHTSLNNLVAEADIIVVSV 110
E ++ V RP + +P++++ GG F V +S P ++ II VSV
Sbjct: 95 EDCLTINVVRPPGTKAGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSV 154
Query: 111 NYRLAP-----------EHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEA 155
NYR++ E A +D ++WVA + G + + + A
Sbjct: 155 NYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFGGDPTKVTIFGESA 210
>pdb|3PPC|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Tyrosine Variant
With Zinc
pdb|3PPC|B Chain B, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Tyrosine Variant
With Zinc
Length = 789
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
>pdb|3PPH|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Threonine Variant
pdb|3PPH|B Chain B, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Threonine Variant
Length = 789
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
>pdb|3PPF|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Alanine Variant
Without Zinc
pdb|3PPG|A Chain A, Crystal Structure Of The Candida Albicans Methionine
Synthase By Surface Entropy Reduction, Alanine Variant
With Zinc
Length = 789
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 167 FLAGDSAGSSIAHYLGLRIKDEVRDLKILGIVMIM 201
F D +G A LGL ++DEV DL+ GI +I
Sbjct: 600 FPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQ 634
>pdb|2QRU|A Chain A, Crystal Structure Of An Alpha/beta Hydrolase Superfamily
Protein From Enterococcus Faecalis
Length = 274
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 56 GVSARVYRPSNITNKVPLVVYFHGGAFVIASSAD-PKYHTSLNNLVAEADIIVVSVNYRL 114
G + +Y T VVY HGG + + +D P+ L L V++++Y L
Sbjct: 14 GATVTIY--PTTTEPTNYVVYLHGGGXIYGTKSDLPE---ELKELFTSNGYTVLALDYLL 68
Query: 115 AP 116
AP
Sbjct: 69 AP 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,882,054
Number of Sequences: 62578
Number of extensions: 337854
Number of successful extensions: 956
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 868
Number of HSP's gapped (non-prelim): 62
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)