Query 036132
Match_columns 437
No_of_seqs 128 out of 1136
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 16:34:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.6E-75 8.9E-80 594.0 36.7 407 27-435 4-413 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 1.4E-67 4.9E-72 536.5 35.8 389 28-437 5-403 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 8.7E-60 3E-64 475.8 34.3 365 31-431 2-381 (381)
4 1j71_A Candidapepsin, aspartic 100.0 4.5E-53 1.5E-57 419.5 26.2 312 31-421 2-324 (334)
5 2x0b_A Renin; hydrolase-hormon 100.0 2.8E-53 9.5E-58 427.6 24.4 316 31-420 50-382 (383)
6 1tzs_A Cathepsin E; hydrolase, 100.0 9.9E-53 3.4E-57 419.7 28.1 315 31-420 12-341 (351)
7 1am5_A Pepsin, acid proteinase 100.0 7.9E-53 2.7E-57 415.9 26.5 311 32-420 2-323 (324)
8 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-52 4E-57 414.9 27.3 309 33-420 5-323 (325)
9 3cms_A Chymosin B; hydrolase, 100.0 6.7E-53 2.3E-57 416.3 24.8 310 32-420 4-322 (323)
10 3psg_A Pepsinogen; hydrolase(a 100.0 4.4E-53 1.5E-57 424.9 23.0 314 31-420 45-369 (370)
11 1mpp_A Pepsin; hydrolase(acid 100.0 3.2E-52 1.1E-56 417.6 28.7 323 28-420 4-354 (361)
12 2qzx_A Candidapepsin-5; aspart 100.0 1.1E-52 3.7E-57 418.0 24.9 315 31-422 2-332 (342)
13 1dpj_A Proteinase A; proteinas 100.0 4.4E-52 1.5E-56 411.5 27.7 312 32-420 3-328 (329)
14 3k1w_A Renin; protease, altern 100.0 2.7E-52 9.4E-57 414.8 24.4 320 29-422 5-341 (341)
15 1htr_B Gastricsin; aspartyl pr 100.0 2.3E-52 8E-57 413.4 23.1 311 34-420 5-328 (329)
16 4aa9_A Chymosin; hydrolase, as 100.0 1.9E-52 6.4E-57 412.5 22.1 308 34-420 3-319 (320)
17 3fv3_A SAPP1P-secreted asparti 100.0 9.8E-52 3.4E-56 410.5 26.2 311 31-423 2-331 (339)
18 3pvk_A Candidapepsin-2; hydrol 100.0 8.9E-52 3.1E-56 411.2 24.2 316 32-423 3-333 (342)
19 3c9x_A Trichoderma reesei aspa 100.0 2.3E-51 7.8E-56 406.3 25.1 309 33-419 4-328 (329)
20 1miq_A Plasmepsin; aspartic pr 100.0 1.3E-51 4.3E-56 415.0 20.2 310 31-421 51-374 (375)
21 1oew_A Endothiapepsin; hydrola 100.0 4.1E-51 1.4E-55 404.5 23.1 308 33-419 4-328 (329)
22 1qdm_A Prophytepsin; aspartic 100.0 4.8E-50 1.6E-54 414.6 26.9 332 31-420 41-477 (478)
23 1yg9_A Aspartic protease BLA G 100.0 8.2E-51 2.8E-55 402.5 19.8 309 32-420 7-328 (330)
24 1ibq_A Aspergillopepsin; aspar 100.0 7E-50 2.4E-54 395.0 25.4 308 33-420 4-324 (325)
25 1wkr_A Polyporopepsin; hydrola 100.0 1.1E-49 3.7E-54 396.0 25.8 300 33-420 4-332 (340)
26 2bju_A Plasmepsin II; aspartic 100.0 2.6E-50 8.8E-55 412.9 21.8 310 32-421 128-450 (453)
27 3qvc_A Histo-aspartic protease 100.0 1.6E-50 5.6E-55 414.7 20.1 311 31-422 126-450 (451)
28 2ewy_A Beta-secretase 2; BACE2 100.0 3.6E-49 1.2E-53 398.5 28.2 328 34-432 5-360 (383)
29 1izd_A Aspartic proteinase; su 100.0 1.2E-49 4.1E-54 393.0 22.6 299 41-420 13-322 (323)
30 2qp8_A Beta-secretase 1; BACE1 100.0 5.3E-49 1.8E-53 398.8 27.4 329 32-432 11-372 (395)
31 1bxo_A Protein (penicillopepsi 100.0 2.6E-49 8.9E-54 390.6 21.2 305 34-420 6-322 (323)
32 3vf3_A Beta-secretase 1; struc 100.0 3.5E-48 1.2E-52 393.7 29.5 324 42-433 27-380 (402)
33 3lpj_A Beta-secretase 1; alzhe 100.0 4.5E-48 1.5E-52 398.9 29.3 323 42-432 73-425 (455)
34 1b5f_A Protein (cardosin A); h 100.0 1.5E-38 5E-43 300.6 20.0 228 33-316 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.2E-35 7.6E-40 279.0 20.7 223 153-420 3-240 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 1.3E-18 4.5E-23 140.2 8.9 94 32-143 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.5 1.9E-14 6.6E-19 113.5 7.1 71 348-420 12-86 (87)
38 2i1a_A DNA damage-inducible pr 90.5 0.45 1.5E-05 40.0 6.1 30 41-72 23-52 (148)
39 2i1a_A DNA damage-inducible pr 90.1 1.4 4.7E-05 36.9 8.8 25 394-418 110-134 (148)
40 3s8i_A Protein DDI1 homolog 1; 82.6 6.8 0.00023 32.9 9.0 27 393-419 108-134 (148)
41 1fmb_A EIAV protease; hydrolas 77.5 2 7E-05 33.9 3.8 27 44-72 8-34 (104)
42 2hs1_A HIV-1 protease; ultra-h 76.7 2.2 7.6E-05 33.4 3.7 27 45-73 9-35 (99)
43 3ec0_A Protease; HIV-2, inhibi 69.4 4.1 0.00014 31.8 3.6 26 45-72 9-34 (99)
44 3liy_A Protease; hydrolase, hy 66.2 5.1 0.00017 32.1 3.6 28 45-72 11-41 (116)
45 2hah_A Protease, retropepsin; 63.8 5.7 0.00019 32.0 3.5 26 44-72 14-39 (116)
46 3s8i_A Protein DDI1 homolog 1; 62.0 6 0.00021 33.2 3.6 30 41-72 21-50 (148)
47 3sqf_A Protease; folded monome 56.3 10 0.00035 30.3 3.8 26 45-72 10-35 (114)
48 3slz_A GAG-Pro-POL polyprotein 43.8 19 0.00066 29.5 3.7 30 42-73 20-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.9 22 0.00075 31.4 3.6 27 44-72 8-34 (203)
50 2rsp_A RSV protease; hydrolase 38.4 22 0.00075 28.8 3.1 21 51-73 27-47 (124)
51 3c9x_A Trichoderma reesei aspa 37.3 31 0.0011 32.5 4.6 40 32-73 184-229 (329)
52 1b5f_A Protein (cardosin A); h 37.1 40 0.0014 30.2 5.1 38 33-73 181-226 (239)
53 2apr_A Rhizopuspepsin; hydrola 33.3 30 0.001 32.6 3.7 41 31-73 183-228 (325)
54 1izd_A Aspartic proteinase; su 33.2 34 0.0012 32.2 4.1 39 33-73 181-224 (323)
55 1ibq_A Aspergillopepsin; aspar 33.2 36 0.0012 32.0 4.3 41 31-73 178-224 (325)
56 1bxo_A Protein (penicillopepsi 31.5 31 0.0011 32.4 3.5 40 32-73 180-223 (323)
57 1t6e_X Xylanase inhibitor; two 30.5 27 0.00093 33.7 3.0 43 31-73 192-245 (381)
58 1lya_B Cathepsin D; lysosomal 30.1 49 0.0017 29.4 4.5 32 42-73 98-136 (241)
59 1oew_A Endothiapepsin; hydrola 29.1 36 0.0012 32.0 3.5 41 31-73 182-228 (329)
60 3aup_A SBG7S, BG, basic 7S glo 27.3 46 0.0016 32.4 4.0 43 30-73 216-275 (403)
61 1yg9_A Aspartic protease BLA G 24.1 42 0.0014 31.6 3.0 32 42-73 192-229 (330)
62 1fmb_A EIAV protease; hydrolas 23.2 74 0.0025 24.8 3.7 33 261-308 6-38 (104)
63 1qdm_A Prophytepsin; aspartic 21.7 92 0.0031 31.1 5.1 38 33-73 224-269 (478)
64 3ka2_A [L-Ala51;Gly51']HIV-1 p 21.6 71 0.0024 28.1 3.6 27 44-72 112-138 (203)
65 2hs1_A HIV-1 protease; ultra-h 21.3 64 0.0022 24.9 2.9 30 261-305 6-35 (99)
66 3slz_A GAG-Pro-POL polyprotein 21.1 70 0.0024 26.1 3.3 27 264-305 23-49 (132)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.6e-75 Score=594.04 Aligned_cols=407 Identities=67% Similarity=1.113 Sum_probs=344.8
Q ss_pred cCCcceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCC
Q 036132 27 FRPKALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFS 106 (437)
Q Consensus 27 ~~~~~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~ 106 (437)
.+++++.+||+++..+++|+++|.||||||++.|+|||||+++||+|.+|++|+||+.+.|.+..|..+.++.|. .|.+
T Consensus 4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~-~c~s 82 (413)
T 3vla_A 4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACG-DCFN 82 (413)
T ss_dssp CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEE-CCSS
T ss_pred CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCc-cccc
Confidence 478899999999999999999999999999999999999999999999999999999999999999988888885 4666
Q ss_pred CCCCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCC
Q 036132 107 PPRPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRI 186 (437)
Q Consensus 107 ~~~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~ 186 (437)
..+++|.++.|.|.+.|+.|++.+.|++++|+|+|+..+|...+..+++++++|||+..+...++....+||||||++++
T Consensus 83 ~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~l 162 (413)
T 3vla_A 83 GPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRI 162 (413)
T ss_dssp CCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSS
T ss_pred CCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCc
Confidence 55667888889999999438899999999999999876554333456888999999998643344567899999999999
Q ss_pred chHhhhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCc-eeeeeCccCCCCCCCcccCCCCCcceEEeE
Q 036132 187 SLPSQFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKS-LFYTPLILNPVSTAGAFFEGEPSAEYFIGV 265 (437)
Q Consensus 187 s~~~ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~-i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l 265 (437)
|+++||.+++.++++||+||.+....+|+|+||+++..+.|+ .+++++ +.|+||+.++..++.++++.+...+|.|+|
T Consensus 163 Sl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~-~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l 241 (413)
T 3vla_A 163 ALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPN-IIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241 (413)
T ss_dssp SHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTT-EEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECC
T ss_pred chHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCccccccc-ccccCCceeEeecccCCccccccccccCCCceEEEEE
Confidence 999999998888889999999864568999999998654454 457888 999999987644445566655668999999
Q ss_pred eeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhh--cCCCCCCCCCCCcccccCCCCCC
Q 036132 266 KSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVA--NIPRVTPVAPFGACFNSTFVGST 343 (437)
Q Consensus 266 ~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~C~~~~~~~~~ 343 (437)
++|+||++.+.+++..+.++++|.+++||||||++++||+++|++|+++|.+++. ++++.+....+..||+.++...+
T Consensus 242 ~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 321 (413)
T 3vla_A 242 KSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILST 321 (413)
T ss_dssp CEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCEE
T ss_pred EEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCcccc
Confidence 9999999999988777777666678999999999999999999999999998875 45544434456789987654322
Q ss_pred CCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEEEEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEeecCcc
Q 036132 344 RVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSSLLF 423 (437)
Q Consensus 344 ~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~~~~ 423 (437)
+.+..+|+|+|+|+|++++|+|++++|++...++..|++++.......+.||||+.|||++|+|||++++|||||++++.
T Consensus 322 ~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~~ 401 (413)
T 3vla_A 322 RLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLG 401 (413)
T ss_dssp TTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGGG
T ss_pred ccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEeccc
Confidence 23357999999999855899999999999876678999888754322357999999999999999999999999999999
Q ss_pred ccccCCCccCcc
Q 036132 424 HQTTCANFNFTS 435 (437)
Q Consensus 424 ~~~~c~~~~~~~ 435 (437)
++++|++|+|||
T Consensus 402 ~~~~c~~~~~~~ 413 (413)
T 3vla_A 402 SRTTCANFNFTS 413 (413)
T ss_dssp GTCCGGGSBCCC
T ss_pred CcccccCcCCCC
Confidence 999999999986
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.4e-67 Score=536.47 Aligned_cols=389 Identities=42% Similarity=0.773 Sum_probs=309.4
Q ss_pred CC-cceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCC
Q 036132 28 RP-KALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFS 106 (437)
Q Consensus 28 ~~-~~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~ 106 (437)
+| +.+.+||+.+..+.+|+++|.||||||+++|+|||||+++||+|.+|++|++|+.+.|.+..|.....+.|. .|..
T Consensus 5 ~~~~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~s~~C~~~~~~~c~-~c~~ 83 (403)
T 3aup_A 5 KPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCL-SCPA 83 (403)
T ss_dssp -CCCCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTTBHHHHHTTCCCEE-ECSS
T ss_pred CCCccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCCCccccCccccCcc-ccCC
Confidence 45 778999998778999999999999999999999999999999999999999999999999999988888886 5766
Q ss_pred CCCCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCC--ccceeeeCceEEeccccCccC-CCCCCcceEeecCC
Q 036132 107 PPRPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKN--LGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGR 183 (437)
Q Consensus 107 ~~~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~--~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~ 183 (437)
+.+++|.++.|.|.+.|+.|++.+.|++++|+|++++.+|.. ....+++++++|||+...... +.....+||||||+
T Consensus 84 ~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~ 163 (403)
T 3aup_A 84 ASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGH 163 (403)
T ss_dssp SCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSS
T ss_pred CCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCC
Confidence 555678778999999996478999999999999998854321 122357889999999986433 44467899999999
Q ss_pred CCCchHhhhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCC---CCCcCCCCceeeeeCccCCCCCCCcccCCCCCcc
Q 036132 184 TRISLPSQFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFL---PRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAE 260 (437)
Q Consensus 184 ~~~s~~~ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~---p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~ 260 (437)
++++++.|+.+....+++||+||.+....+|.|+||| |+..+ |+ ....+++.|+||+.++ ..+
T Consensus 164 ~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G-~~~~~~l~~~Pl~~~~------------~~~ 229 (403)
T 3aup_A 164 APISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQN-QDIFHDLAFTPLTITL------------QGE 229 (403)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTT-CCTTTTEEEEECEECT------------TSC
T ss_pred CCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccc-ccccCceeecccccCC------------CCc
Confidence 9999999997665556899999998645789999999 75221 11 1112499999999753 368
Q ss_pred eEEeEeeEEEcCEEe-ccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 261 YFIGVKSIKINGNTV-PLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 261 y~v~l~~i~v~~~~~-~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
|.|.|++|+|+++.+ .+++..+.+++.+..++||||||++++||+++|++|.++|.++++.++++.....+..|++...
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGG
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCC
Confidence 999999999999988 7666655555555678999999999999999999999999877643333332233456886543
Q ss_pred CCCCCCCCCcCeEEEEEecC-ceEEEEcCCCeEEEeCCCeEEEEEEeCCCCCCCceeechhhccceEEEEeCCCCeEEE-
Q 036132 340 VGSTRVGPAVPQIDLVLQSN-TVIWRIFGANSMVQVRDDVLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGF- 417 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~-~~~~~v~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGf- 417 (437)
. ..+|.|+|+|+|+ +++|+||+++|++...++..|++++.......+.||||+.|||++|+|||++++||||
T Consensus 310 ~------~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~ 383 (403)
T 3aup_A 310 I------NAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFS 383 (403)
T ss_dssp C------CCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEE
T ss_pred c------CcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEe
Confidence 2 3689999999982 1699999999999876567999888765422357999999999999999999999999
Q ss_pred eecCccccccCCCccCccCC
Q 036132 418 SSSLLFHQTTCANFNFTSNA 437 (437)
Q Consensus 418 a~~~~~~~~~c~~~~~~~~~ 437 (437)
|++++...++|++|+.+|||
T Consensus 384 A~~~~~~~~~C~~~~~~~~~ 403 (403)
T 3aup_A 384 TSSLHSHGVKCADLFNFANA 403 (403)
T ss_dssp SSCGGGGTCCGGGSCCTTTC
T ss_pred cccccccCCCcccccccccC
Confidence 99999999999999999997
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.7e-60 Score=475.78 Aligned_cols=365 Identities=33% Similarity=0.612 Sum_probs=278.9
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCC-C
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPP-R 109 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~-~ 109 (437)
.|.+||+++..+.+|+++|.|||| |+|||||+++||+|.+| .+|+.+.|.+..|...+++... .|.... .
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---~~~~~~~C~s~~C~~~~~~~~~-sc~~~~~~ 72 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---QPPAEIPCSSPTCLLANAYPAP-GCPAPSCG 72 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---CCCCCCBTTSHHHHHHHSSCCT-TCCCCCC-
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---CCCCccCCCCchhccccCCCCC-CCCCccCC
Confidence 378999998889999999999998 99999999999999877 3578899999999876554332 232210 0
Q ss_pred CCCCCCCC-eeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCCch
Q 036132 110 PGCNNDTC-AHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRISL 188 (437)
Q Consensus 110 ~~~~~~~~-~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s~ 188 (437)
..|.++.| .|.++|+ +++.++|++++|+|++++.+|......+.+ ++.|||+..+....+....+||||||++++++
T Consensus 73 ~~~~~~~c~~f~i~Yg-dGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~-~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s~ 150 (381)
T 1t6e_X 73 SDKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGSKPVSKVNV-GVLAACAPSKLLASLPRGSTGVAGLANSGLAL 150 (381)
T ss_dssp -----CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSSSEEEEEEE-EEEEEECCGGGGTTSCTTEEEEEECSSSTTSH
T ss_pred cCcCCCcccccccccc-CCceeeEEEEEEEEEeeccCCCccccceee-eeEeecCcccccCCCCCCCceEEEeCCCcchh
Confidence 01234567 5999998 988889999999999987532111111122 13689998763333446789999999999999
Q ss_pred HhhhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEeEeeE
Q 036132 189 PSQFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIGVKSI 268 (437)
Q Consensus 189 ~~ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i 268 (437)
+.||.+++.++++||+||.+. .+|+|+|||++..+ .++.+++.|+||+.++. ..+|.|.|++|
T Consensus 151 ~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~----~~~~g~l~~tPl~~~~~-----------~~~y~v~l~~i 213 (381)
T 1t6e_X 151 PAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPW----PQFTQSMPYTPLVTKGG-----------SPAHYISARSI 213 (381)
T ss_dssp HHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSC----HHHHTTCCEEECBCCTT-----------CCSCEECEEEE
T ss_pred HHHHhhhcccCceEEEEeCCC--CCeeEEeCCccccc----ccccCcceeeccccCCC-----------CcceEEEEEEE
Confidence 999998876678999999885 68999999986411 14678999999987531 24577999999
Q ss_pred EEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhh-------cCCCC-CCCCCCCcccccCCC
Q 036132 269 KINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVA-------NIPRV-TPVAPFGACFNSTFV 340 (437)
Q Consensus 269 ~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~-------~~~~~-~~~~~~~~C~~~~~~ 340 (437)
+||++.+.+++..+. .+++||||||++++||+++|++|+++|.+++. .+++. .....+..|++.+..
T Consensus 214 ~vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~ 288 (381)
T 1t6e_X 214 VVGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTL 288 (381)
T ss_dssp EETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGC
T ss_pred EEcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCC
Confidence 999999876654432 26799999999999999999999999988763 24433 223456789987543
Q ss_pred CCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEEEEEeCCC-----CCCCceeechhhccceEEEEeCCCCeE
Q 036132 341 GSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCLGFVDGGV-----NPRTSIVIGGHQLEDNLLQFDLATSRL 415 (437)
Q Consensus 341 ~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ILG~~flr~~yvvFD~e~~rI 415 (437)
........+|+|+|+|+| +++|+||+++|++...++..|++++.... ...+.||||+.|||++|+|||++|+||
T Consensus 289 ~~~~~~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~ri 367 (381)
T 1t6e_X 289 GNNLGGYAVPNVQLGLDG-GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRL 367 (381)
T ss_dssp CEETTEECCCCEEEEETT-SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEE
T ss_pred cccccCCcCCeEEEEECC-CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEE
Confidence 211112368999999986 58999999999988766789999887653 112579999999999999999999999
Q ss_pred EEeecCccccccCCCc
Q 036132 416 GFSSSLLFHQTTCANF 431 (437)
Q Consensus 416 Gfa~~~~~~~~~c~~~ 431 (437)
|||+.++ .++|++|
T Consensus 368 GfA~~~~--~~~cs~~ 381 (381)
T 1t6e_X 368 GFSRLPH--FTGCGGL 381 (381)
T ss_dssp EEEECCT--TCCSCC-
T ss_pred EEecccC--CCCCCCC
Confidence 9999988 7899986
No 4
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.5e-53 Score=419.46 Aligned_cols=312 Identities=17% Similarity=0.209 Sum_probs=247.2
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCC--CCCCCCCcccccCCCccccccccCCccccCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCD--QGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPP 108 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~ 108 (437)
.+.+||++ .+.+|+++|.||||+|+++|+|||||+++||+|. +|..... .+.+..|.....+++. .
T Consensus 2 ~~~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~------~ 69 (334)
T 1j71_A 2 DVPTTLIN--EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYS----GQTNNFCKQEGTFDPS------S 69 (334)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGSSCCBCGG------G
T ss_pred ceeEEEec--CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccc----ccccccccCCCcCCcc------c
Confidence 47899998 5889999999999999999999999999999865 4531100 1223456655445443 1
Q ss_pred CCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCC--
Q 036132 109 RPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRI-- 186 (437)
Q Consensus 109 ~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-- 186 (437)
++++....|.|.+.|+ +++.++|.+++|+|++++. +++++.|||++.. ...+||||||+...
T Consensus 70 SsT~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~------~~~~GilGLg~~~~~~ 133 (334)
T 1j71_A 70 SSSAQNLNQDFSIEYG-DLTSSQGSFYKDTVGFGGI---------SIKNQQFADVTTT------SVDQGIMGIGFTADEA 133 (334)
T ss_dssp CTTCEEEEEEEEEEBT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------SSSSCEEECSCGGGSS
T ss_pred CCCcccCCCceEEEEC-CCCEEEEEEEEEEEEECCE---------EEccEEEEEEEec------CCCccEEEEcCCcccC
Confidence 3344556799999997 8888999999999999864 7889999999875 24799999998754
Q ss_pred ------chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 187 ------SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 187 ------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
+++.+|.+++.+ +++||+||.+.....|.|+|||+|+ +++.|++.|+|++. ..
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~ 193 (334)
T 1j71_A 134 GYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDN------AKYTGTLTALPVTS--------------SV 193 (334)
T ss_dssp TTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET------TSEEEEEEEEECCC--------------SS
T ss_pred ccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeech------HHccCceEEEEccC--------------CC
Confidence 688999999888 4789999998545689999999986 56889999999975 35
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.+++|+|+++.+.. ...+||||||++++||+++|++|.+++..... .......+..|+
T Consensus 194 ~~~v~l~~i~v~g~~~~~-----------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~---- 255 (334)
T 1j71_A 194 ELRVHLGSINFDGTSVST-----------NADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD---- 255 (334)
T ss_dssp SCEEEEEEEEETTEEEEE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC----
T ss_pred eEEEEEeEEEECCEeccC-----------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC----
Confidence 899999999999988743 24699999999999999999999998876532 111011114564
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEEEEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEee
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSS 419 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~ 419 (437)
.+|.|+|+|.+ +.+|+||+++|++...++..|+..+... +.||||+.|||++|+|||++++|||||+
T Consensus 256 --------~~p~i~f~f~~-g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~ 322 (334)
T 1j71_A 256 --------LSGDAVFNFDQ-GVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQ 322 (334)
T ss_dssp --------CCSEEEEEEST-TCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred --------CCCceEEEEcC-CcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEe
Confidence 26899999964 5899999999999876555698543322 2589999999999999999999999998
Q ss_pred cC
Q 036132 420 SL 421 (437)
Q Consensus 420 ~~ 421 (437)
..
T Consensus 323 ~~ 324 (334)
T 1j71_A 323 VK 324 (334)
T ss_dssp EC
T ss_pred cC
Confidence 63
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.8e-53 Score=427.61 Aligned_cols=316 Identities=18% Similarity=0.251 Sum_probs=249.7
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
...+||++ ..+.+|+++|.||||||+++|+|||||+++||+|..|.. .+..|..+..++++ .++
T Consensus 50 ~~~~~l~n-~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~---------~~~~C~~~~~y~~~------~Ss 113 (383)
T 2x0b_A 50 TSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDAS------DSS 113 (383)
T ss_dssp -CEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TSHHHHTSCCBCGG------GCT
T ss_pred cceEeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCC---------CcccccCCCCCCCC------CCC
Confidence 45689997 468899999999999999999999999999999987631 12456655555443 234
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCCCc--
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 187 (437)
++..+.|.|.++|+ +|+ ++|++++|+|++++. +++ +.|||++...+. +.....|||||||+...+
T Consensus 114 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~ 181 (383)
T 2x0b_A 114 SYKHNGTELTLRYS-TGT-VSGFLSQDIITVGGI---------TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIG 181 (383)
T ss_dssp TCEEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGG
T ss_pred cEEECCcEEEEEcC-Ccc-EEEEEEeeEEEEcCc---------eEE-EEEEEEEecCCcccccCCCceEeccCCCccccC
Confidence 45567899999997 765 899999999999865 787 999999986332 123568999999997654
Q ss_pred ----hHhhhhhccCC-CcceEEecCCCCC----CceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCC
Q 036132 188 ----LPSQFSAAFSF-DRKFAICLSSSSR----VNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPS 258 (437)
Q Consensus 188 ----~~~ql~~~~~i-~~~FS~~L~~~~~----~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~ 258 (437)
+..+|.+++.+ +++||+||.+... .+|+|+|||+|+ ++|.|++.|+|+.. .
T Consensus 182 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~------~~y~G~l~~~pv~~--------------~ 241 (383)
T 2x0b_A 182 RVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP------QHYEGNFHYINLIK--------------T 241 (383)
T ss_dssp GCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCG------GGEEEEEEEEEBSS--------------T
T ss_pred CCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcCh------HHcCCceEEEEcCC--------------C
Confidence 56678888777 5889999998633 389999999996 56889999999974 4
Q ss_pred cceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccC
Q 036132 259 AEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNST 338 (437)
Q Consensus 259 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~ 338 (437)
.+|.|.+++|+|+++.+... +...+||||||+++++|+++|++|.+++.+.. ........|+..
T Consensus 242 ~~w~v~l~~i~v~~~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~g~~~v~C~~~- 305 (383)
T 2x0b_A 242 GVWQIQMKGVSVGSSTLLCE---------DGCLALVDTGASYISGSTSSIEKLMEALGAKK------RLFDYVVKCNEG- 305 (383)
T ss_dssp TSCEEEECEEEESSCCCBST---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CSSCEEEEGGGT-
T ss_pred ceEEEEEeEEEeCCceEEcC---------CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cCCcEEEecccc-
Confidence 68999999999999764321 13689999999999999999999998886431 111223468765
Q ss_pred CCCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCCC--CCCceeechhhccceEEEEeCCCC
Q 036132 339 FVGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGVN--PRTSIVIGGHQLEDNLLQFDLATS 413 (437)
Q Consensus 339 ~~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~ILG~~flr~~yvvFD~e~~ 413 (437)
..+|+|+|+|+| .+|+||+++|++.... +..|+ ++...... ..+.||||++|||++|+|||++|+
T Consensus 306 --------~~~P~i~f~~~g--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 375 (383)
T 2x0b_A 306 --------PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNN 375 (383)
T ss_dssp --------TTCCCEEEEETT--EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTT
T ss_pred --------ccCceEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCC
Confidence 368999999987 9999999999987653 46898 67764321 245799999999999999999999
Q ss_pred eEEEeec
Q 036132 414 RLGFSSS 420 (437)
Q Consensus 414 rIGfa~~ 420 (437)
|||||+.
T Consensus 376 rIGfA~a 382 (383)
T 2x0b_A 376 RIGFALA 382 (383)
T ss_dssp EEEEEEE
T ss_pred EEeEEEc
Confidence 9999985
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.9e-53 Score=419.73 Aligned_cols=315 Identities=17% Similarity=0.216 Sum_probs=246.8
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
.+.+||++ ..+.+|+++|.||||+|+++|+|||||+++||+|..| .+..|.....+++. .++
T Consensus 12 ~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~Ss 73 (351)
T 1tzs_A 12 SAKEPLIN-YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-----------TSPACKTHSRFQPS------QSS 73 (351)
T ss_dssp --CCTTGG-GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG------GCT
T ss_pred ccceecee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CccccCCCCcCCcc------cCc
Confidence 34578885 4678999999999999999999999999999999765 33456655545443 234
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc--
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s-- 187 (437)
++....|.|.+.|+ +++ ++|.+++|+|++++. +++++.|||+....+..+ ....+||||||+...+
T Consensus 74 T~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 74 TYSQPGQSFSIQYG-TGS-LSGIIGADQVSVEGL---------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp TCBCCSCEEEEESS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ceEECCCEEEEEeC-CCC-eEEEEEEeEEEECCe---------EECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 45667899999997 765 899999999999864 788999999988633222 3467999999997654
Q ss_pred ----hHhhhhhccCC-CcceEEecCCCCCC--ceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcc
Q 036132 188 ----LPSQFSAAFSF-DRKFAICLSSSSRV--NGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAE 260 (437)
Q Consensus 188 ----~~~ql~~~~~i-~~~FS~~L~~~~~~--~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~ 260 (437)
+..+|.+++.+ +++||+||.+.... +|.|+|||+|+ +++.|++.|+|++. ..+
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~ 202 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDH------SHFSGSLNWVPVTK--------------QAY 202 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCG------GGBCSCCEEEECSE--------------ETT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCH------HHcCCceEEEecCC--------------Cce
Confidence 66788888877 57899999986333 89999999996 56889999999975 368
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCC
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFV 340 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~ 340 (437)
|.|.+++|+|+++.+... ....+||||||++++||+++|++|.+++.+... . ......|+..
T Consensus 203 ~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~-g~~~~~C~~~--- 264 (351)
T 1tzs_A 203 WQIALDNIQVGGTVMFCS---------EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D-GEYAVECANL--- 264 (351)
T ss_dssp EEEEEEEEEETTEEEECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S-SSEEECGGGG---
T ss_pred EEEEeCEEEECCceEEcC---------CCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----C-CeEEEeCCCC---
Confidence 999999999999875321 135799999999999999999999988754321 1 1223468765
Q ss_pred CCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCCC--CCCceeechhhccceEEEEeCCCCeE
Q 036132 341 GSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGVN--PRTSIVIGGHQLEDNLLQFDLATSRL 415 (437)
Q Consensus 341 ~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~ILG~~flr~~yvvFD~e~~rI 415 (437)
..+|+|+|+|+| .+|+||+++|++.... +..|+ ++...... ....||||+.|||++|+|||++++||
T Consensus 265 ------~~~P~i~f~f~g--~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ri 336 (351)
T 1tzs_A 265 ------NVMPDVTFTING--VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRV 336 (351)
T ss_dssp ------GGSCCEEEEETT--EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEE
T ss_pred ------ccCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEE
Confidence 358999999976 9999999999987542 35898 57654321 23579999999999999999999999
Q ss_pred EEeec
Q 036132 416 GFSSS 420 (437)
Q Consensus 416 Gfa~~ 420 (437)
|||+.
T Consensus 337 gfA~~ 341 (351)
T 1tzs_A 337 GLAPA 341 (351)
T ss_dssp EEEEB
T ss_pred EEEEC
Confidence 99986
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=7.9e-53 Score=415.92 Aligned_cols=311 Identities=18% Similarity=0.252 Sum_probs=248.3
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
+.+||++ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|.....+++. .+++
T Consensus 2 ~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~SsT 63 (324)
T 1am5_A 2 VTEQMKN-EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-----------SAQACSNHNKFKPR------QSST 63 (324)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTC-----------CSHHHHTSCCBCGG------GCTT
T ss_pred ceeeeec-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CcccccCCCcCCCc------cCCC
Confidence 5789997 4688999999999999999999999999999999766 33456554444433 1334
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCC----
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRI---- 186 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~---- 186 (437)
+....|.|.+.|+ +++ +.|.+++|+|++++. +++++.|||++......+ ....+||||||+...
T Consensus 64 ~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 132 (324)
T 1am5_A 64 YVETGKTVDLTYG-TGG-MRGILGQDTVSVGGG---------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAG 132 (324)
T ss_dssp CEEEEEEEEEECS-SCE-EEEEEEEEEEESSSS---------CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGG
T ss_pred eEeCCcEEEEEEC-CCC-eEEEEEECceeECCc---------EEcccEEEEEEecccccccCCCCceEEecCCccccccC
Confidence 4556799999997 765 599999999999875 678999999998643222 346899999999764
Q ss_pred --chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEE
Q 036132 187 --SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFI 263 (437)
Q Consensus 187 --s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v 263 (437)
+++.+|.+++.+ +++||+||.+....+|.|+|||+|+ +++.|++.|+|+.. ..+|.|
T Consensus 133 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~~~v 192 (324)
T 1am5_A 133 AVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDN------SHYTGSIHWIPVTA--------------EKYWQV 192 (324)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCG------GGBCSCCEEEEEEE--------------ETTEEE
T ss_pred CCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCH------HHcCCceEEEecCC--------------CcEEEE
Confidence 467788888777 5789999998645689999999996 56889999999975 368999
Q ss_pred eEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCC
Q 036132 264 GVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGST 343 (437)
Q Consensus 264 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 343 (437)
.+++|+|+++.+... + ..+||||||++++||+++|++|.+++.+. . ........|+..
T Consensus 193 ~l~~i~v~~~~~~~~---------~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----~~g~~~~~C~~~------ 250 (324)
T 1am5_A 193 ALDGITVNGQTAACE---------G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----NQGEMMGNCASV------ 250 (324)
T ss_dssp EECEEEETTEECCCC---------C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----CCCCEECCTTSS------
T ss_pred EEeEEEECCceeecc---------C-ceEEEecCCccEECCHHHHHHHHHHhCCc-c-----cCCcEEEeCCCc------
Confidence 999999999875321 1 57999999999999999999999887653 1 111123468754
Q ss_pred CCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 344 RVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGV--NPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 344 ~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
..+|+|+|+|+| .+|+||+++|++.. +..|+ ++..... ...+.||||+.|||++|+|||++++|||||+.
T Consensus 251 ---~~~P~i~f~f~g--~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a 323 (324)
T 1am5_A 251 ---QSLPDITFTING--VKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp ---SSSCCEEEEETT--EEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred ---ccCCcEEEEECC--EEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEEC
Confidence 368999999976 99999999999876 56898 6765431 12357999999999999999999999999985
No 8
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-52 Score=414.94 Aligned_cols=309 Identities=16% Similarity=0.167 Sum_probs=242.6
Q ss_pred EEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCC
Q 036132 33 LLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGC 112 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~ 112 (437)
++|+..+..+.+|+++|.||||+|+++|+|||||+++||+|.+|. .| |.....+++. .++++
T Consensus 5 ~v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--------~c----~~~~~~y~~~------~SsT~ 66 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--------NC----GSGQTKYDPN------QSSTY 66 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--------SC----CTTSCCBCGG------GCTTC
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--------hH----hcCCCCCCcc------cCCCe
Confidence 455666668999999999999999999999999999999998773 23 3333334332 12334
Q ss_pred CCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCC------
Q 036132 113 NNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRI------ 186 (437)
Q Consensus 113 ~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~------ 186 (437)
....|.|.+.|+ +++.++|++++|+|++++. +++++.|||++.....+.....+||||||+...
T Consensus 67 ~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 136 (325)
T 2apr_A 67 QADGRTWSISYG-DGSSASGILAKDNVNLGGL---------LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGV 136 (325)
T ss_dssp EEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTC
T ss_pred eeCCCEEEEEEC-CCCCEEEEEEEEEEEECCE---------EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCC
Confidence 456799999997 8888999999999999864 788999999987632222234899999998754
Q ss_pred -chHhhhhhccCC-CcceEEecCCC-CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEE
Q 036132 187 -SLPSQFSAAFSF-DRKFAICLSSS-SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFI 263 (437)
Q Consensus 187 -s~~~ql~~~~~i-~~~FS~~L~~~-~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v 263 (437)
+++.+|.+++.+ +++||+||.+. ....|.|+|||+|+ +++.|++.|+|+... ..+|.|
T Consensus 137 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~~~~v 197 (325)
T 2apr_A 137 KTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDS------TKFKGSLTTVPIDNS-------------RGWWGI 197 (325)
T ss_dssp CCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCG------GGBCSCCEEEECBCT-------------TSSCEE
T ss_pred CCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCc------hhccCceEEEEccCC-------------CCEEEE
Confidence 467888888877 57899999763 24689999999986 578899999999743 468999
Q ss_pred eEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCC
Q 036132 264 GVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGST 343 (437)
Q Consensus 264 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 343 (437)
.+++|+|+++ +.. ....+||||||++++||+++|+++++++.+.+. .. ......|+.
T Consensus 198 ~l~~i~vg~~-~~~----------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~---~~--g~~~~~C~~------- 254 (325)
T 2apr_A 198 TVDRATVGTS-TVA----------SSFDGILDTGTTLLILPNNIAASVARAYGASDN---GD--GTYTISCDT------- 254 (325)
T ss_dssp EECEEEETTE-EEE----------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC---SS--SCEEECSCG-------
T ss_pred EEeEEEECCE-ecC----------CCceEEEecCCccEECCHHHHHHHHHHHhcccC---CC--CeEEEECCC-------
Confidence 9999999993 211 135799999999999999999999999876543 11 112235763
Q ss_pred CCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEEEE-EeCCCCCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 344 RVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCLGF-VDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 344 ~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~~~-~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
..+|+|+|+|+| .+++||+++|++... +..|++. .... .+.||||+.|||++|+|||++++|||||+.
T Consensus 255 ---~~~p~i~f~f~g--~~~~ip~~~~~~~~~-~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 255 ---SAFKPLVFSING--ASFQVSPDSLVFEEF-QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp ---GGCCCEEEEETT--EEEEECGGGGEEEEE-TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ---CCCCcEEEEECC--EEEEECHHHEEEcCC-CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 148999999998 499999999987654 5689864 4332 246999999999999999999999999985
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=6.7e-53 Score=416.32 Aligned_cols=310 Identities=16% Similarity=0.169 Sum_probs=245.6
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
..+||++ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|.....+++. .+++
T Consensus 4 ~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~SsT 65 (323)
T 3cms_A 4 ASVPLTN-YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYC-----------KSNACKNHQRFDPR------KSST 65 (323)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTT
T ss_pred ceeeeEe-ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCC-----------CcccccCCCCCCCc------cCCC
Confidence 4589987 4688999999999999999999999999999999766 33456554444433 2344
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCC-CCCCcceEeecCCCCC----
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEG-LASGVKGMAGLGRTRI---- 186 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~---- 186 (437)
+....|.|.+.|+ +++ ++|.+++|+|++++. +++++.|||++...... .....+||||||++..
T Consensus 66 ~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 66 FQNLGKPLSIHYG-TGS-MQGILGYDTVTVSNI---------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp CEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred eEECCcEEEEEeC-CCC-eEEEEEEEEEEECCe---------EEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 5566799999997 765 899999999999864 78899999998763211 1245799999998754
Q ss_pred --chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEE
Q 036132 187 --SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFI 263 (437)
Q Consensus 187 --s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v 263 (437)
++..+|.+++.+ +++||+||.+.. ..|.|+|||+|+ +++.|++.|+|++. ..+|.|
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~-~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~~~v 193 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNG-QESMLTLGAIDP------SYYTGSLHWVPVTV--------------QQYWQF 193 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTS-SCEEEEESCCCG------GGEEEEEEEEECSS--------------BTTBEE
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCC-CCEEEEECCCCh------hhccCceEEEECcc--------------CCeEEE
Confidence 467788888877 578999999863 349999999996 56889999999974 468999
Q ss_pred eEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCC
Q 036132 264 GVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGST 343 (437)
Q Consensus 264 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 343 (437)
.+++|+|+++.+..+. ...+||||||++++||+++|++|.+++..... ........|+..
T Consensus 194 ~l~~i~v~~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~------ 253 (323)
T 3cms_A 194 TVDSVTISGVVVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQN-----QYGEFDIDCDNL------ 253 (323)
T ss_dssp EEEEEEETTEEEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEEE-----TTTEEEECTTCT------
T ss_pred EEeeEEECCEEeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCeec-----CCCcEEEECCCC------
Confidence 9999999998875431 35799999999999999999999988754311 111122467754
Q ss_pred CCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 344 RVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 344 ~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
..+|+|+|+|+| .+|+||+++|++. .+..|+ +++.... .+.||||+.|||++|+|||++++|||||+.
T Consensus 254 ---~~~P~i~f~f~g--~~~~i~~~~y~~~--~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 322 (323)
T 3cms_A 254 ---SYMPTVVFEING--KMYPLTPSAYTSQ--DQGFCTSGFQSENH--SQKWILGDVFIREYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp ---TTSCCEEEEETT--EEEEECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ---ccCceEEEEECC--EEEEECHHHhccC--CCCEEEEEEEeCCC--CCcEEECHHHhhceEEEEECCCCEEEEEEC
Confidence 358999999976 9999999999988 346898 4766532 357999999999999999999999999985
No 10
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.4e-53 Score=424.88 Aligned_cols=314 Identities=19% Similarity=0.215 Sum_probs=245.4
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
....||++ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+..+++. .++
T Consensus 45 ~~~~~l~n-~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C-----------~~~~C~~~~~y~~~------~Ss 106 (370)
T 3psg_A 45 IGDEPLEN-YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-----------SSLACSDHNQFNPD------DSS 106 (370)
T ss_dssp SCCCTTGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG------GCT
T ss_pred cceeccee-ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCC-----------CCcccCCCCCCCCc------cCc
Confidence 45678876 3588999999999999999999999999999999755 34467665555543 133
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCCC---
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTRI--- 186 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~--- 186 (437)
++....|.|.+.|+ +++ ++|++++|+|++++. ++++++|||+...... +.....+||||||++..
T Consensus 107 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~ 175 (370)
T 3psg_A 107 TFEATSQELSITYG-TGS-MTGILGYDTVQVGGI---------SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISAS 175 (370)
T ss_dssp TCEEEEEEEEEESS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGG
T ss_pred CcEECCcEEEEEeC-Cce-EEEEEEEEEEeeCCc---------ccCCeEEEEEEeecccccccCCccceeccCCcccccc
Confidence 44556789999997 765 899999999999875 7889999999987432 22356899999998764
Q ss_pred ---chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceE
Q 036132 187 ---SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYF 262 (437)
Q Consensus 187 ---s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~ 262 (437)
++..+|.+++.| +++||+||.+....+|.|+|||+|+ +++.|++.|+|+.. ..+|.
T Consensus 176 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~------~~y~g~l~~~pv~~--------------~~~w~ 235 (370)
T 3psg_A 176 GATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDS------SYYTGSLNWVPVSV--------------EGYWQ 235 (370)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCG------GGBSSCCEEEECSE--------------ETTEE
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeCh------HhcCCcceeecccc--------------cceeE
Confidence 466778888877 4789999998645689999999996 57889999999975 46899
Q ss_pred EeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCC
Q 036132 263 IGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGS 342 (437)
Q Consensus 263 v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~ 342 (437)
|.+++|+|+++.+... +...+||||||+++++|++++++|.+++.+... ........|...
T Consensus 236 v~l~~i~v~g~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~g~~~v~C~~~----- 296 (370)
T 3psg_A 236 ITLDSITMDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSI----- 296 (370)
T ss_dssp EEECEEESSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGG-----
T ss_pred EEEeEEEECCEEEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEECCCc-----
Confidence 9999999999876532 136899999999999999999999887754311 111123467654
Q ss_pred CCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccceEEEEeCCCCeEEEee
Q 036132 343 TRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGV--NPRTSIVIGGHQLEDNLLQFDLATSRLGFSS 419 (437)
Q Consensus 343 ~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~ 419 (437)
..+|+|+|+|+| .+|+||+++|++. . +..|+ ++..... ..++.||||++|||++|+|||++|+|||||+
T Consensus 297 ----~~lP~i~f~~~g--~~~~l~~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~ 368 (370)
T 3psg_A 297 ----DSLPDIVFTIDG--VQYPLSPSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAP 368 (370)
T ss_dssp ----GGCCCEEEEETT--EEEEECHHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ----ccCCcEEEEECC--EEEEECHHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEE
Confidence 358999999987 9999999999998 3 34698 4655321 1234699999999999999999999999998
Q ss_pred c
Q 036132 420 S 420 (437)
Q Consensus 420 ~ 420 (437)
+
T Consensus 369 a 369 (370)
T 3psg_A 369 V 369 (370)
T ss_dssp B
T ss_pred c
Confidence 5
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.2e-52 Score=417.61 Aligned_cols=323 Identities=14% Similarity=0.133 Sum_probs=251.6
Q ss_pred CCcceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCC
Q 036132 28 RPKALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSP 107 (437)
Q Consensus 28 ~~~~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~ 107 (437)
..+...+||++ ..+.+|+++|.||||+|+++|+|||||+++||+|..|.. +..|.....+++.
T Consensus 4 ~g~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~----------~~~C~~~~~y~~~------ 66 (361)
T 1mpp_A 4 DGSVDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDN----------SEGCVGKRFFDPS------ 66 (361)
T ss_dssp -CCEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCG----------GGTCCSSCCBCGG------
T ss_pred CCccceEEeec-CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCC----------CccCCCCCcCCCc------
Confidence 35566789997 468899999999999999999999999999999986621 2345544444433
Q ss_pred CCCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCcc-----CCC-CCCcceEeec
Q 036132 108 PRPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLL-----EGL-ASGVKGMAGL 181 (437)
Q Consensus 108 ~~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~-----~~~-~~~~~GIlGL 181 (437)
.++++....|.|.+.|+ +++ ++|.+++|+|++++. ++++++|||++.... ..+ ....+|||||
T Consensus 67 ~SsT~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGL 135 (361)
T 1mpp_A 67 SSSTFKETDYNLNITYG-TGG-ANGIYFRDSITVGGA---------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGA 135 (361)
T ss_dssp GCTTCEEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEEC
T ss_pred cCCceEecCCeEEEEEC-Cce-EEEEEEEEEEEECCE---------EEeceEEEEEEeccCccccccccccCCCCCEEEe
Confidence 13344556799999997 766 899999999999864 788999999998643 112 3468999999
Q ss_pred CCCCCc------------hHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCC
Q 036132 182 GRTRIS------------LPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVST 248 (437)
Q Consensus 182 g~~~~s------------~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~ 248 (437)
|++..+ ++.+|.+++.+ .++||+||.+. ...|.|+|||+|+ +++.|++.|+|++....
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~------~~~~g~l~~~p~~~~~~-- 206 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNN------TLLGGDIQYTDVLKSRG-- 206 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCG------GGBSSCCEEEECEEETT--
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCCh------hhcCCceEEEEcccCCC--
Confidence 987544 55678888777 47899999986 5689999999996 56889999999987531
Q ss_pred CCcccCCCCCcceEEeEeeEEEcCEEeccCCccccccccCCCcEE-EeccCcceeecHHHHHHHHHHHHHHhhcCCCCCC
Q 036132 249 AGAFFEGEPSAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTK-ISTVNPYTVLHTSIYNALARAFVKEVANIPRVTP 327 (437)
Q Consensus 249 ~~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~i-iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~ 327 (437)
...+|.|.|++|+|+++.+.... ...+| |||||++++||+++|++|.+++.... +.. .
T Consensus 207 --------~~~~~~v~l~~i~v~~~~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~-~ 265 (361)
T 1mpp_A 207 --------GYFFWDAPVTGVKIDGSDAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TES-Q 265 (361)
T ss_dssp --------EEEEEEEEEEEEEETTEEEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEE-T
T ss_pred --------ceeEEEEEEeEEEECCeeeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCC-C
Confidence 12389999999999998764221 25799 99999999999999999999886542 111 1
Q ss_pred CCCCCcccccCCCCCCCCCCCc-CeEEEEE--ec---CceEEEEcCCCeEEEeC-CCeEEE-EEEeCCCCCCCceeechh
Q 036132 328 VAPFGACFNSTFVGSTRVGPAV-PQIDLVL--QS---NTVIWRIFGANSMVQVR-DDVLCL-GFVDGGVNPRTSIVIGGH 399 (437)
Q Consensus 328 ~~~~~~C~~~~~~~~~~~~~~~-P~l~f~f--~g---~~~~~~v~~~~y~~~~~-~~~~C~-~~~~~~~~~~~~~ILG~~ 399 (437)
......|+.. ..+ |.|+|+| ++ ++++|+||+++|++... ++..|+ +++... .+.||||+.
T Consensus 266 g~~~~~C~~~---------~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~ 333 (361)
T 1mpp_A 266 QGYTVPCSKY---------QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNL 333 (361)
T ss_dssp TEEEEEHHHH---------TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHH
T ss_pred CcEEEECCCc---------ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChH
Confidence 1123578864 246 9999999 51 13899999999999875 346898 676642 247999999
Q ss_pred hccceEEEEeCCCCeEEEeec
Q 036132 400 QLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 400 flr~~yvvFD~e~~rIGfa~~ 420 (437)
|||++|+|||++++|||||+.
T Consensus 334 fl~~~yvvfD~~~~~igfa~~ 354 (361)
T 1mpp_A 334 FLRFFVNVYDFGKNRIGFAPL 354 (361)
T ss_dssp HHTTEEEEEETTTTEEEEEEB
T ss_pred HhccEEEEEECCCCEEEEEEc
Confidence 999999999999999999985
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.1e-52 Score=417.96 Aligned_cols=315 Identities=17% Similarity=0.219 Sum_probs=245.5
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCC--CCCCCCCcccccCCCccccccccCCccccCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCD--QGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPP 108 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~ 108 (437)
.+.+||++ .+.+|+++|.||||+|+++|+|||||+++||+|. +|..... ...+..|.....+++. .
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~------~ 69 (342)
T 2qzx_A 2 PVAVTLHN--EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWR----GDKGDFCKSAGSYSPA------S 69 (342)
T ss_dssp CEEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSS----SCCTTGGGTTCCBCGG------G
T ss_pred ceeEEEec--CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccc----cCccccccCCCcCCcc------c
Confidence 46889998 6889999999999999999999999999999865 4521000 0012356554444433 1
Q ss_pred CCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCC--
Q 036132 109 RPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRI-- 186 (437)
Q Consensus 109 ~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-- 186 (437)
++++....|.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++.. ...+||||||+...
T Consensus 70 SsT~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~------~~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 70 SRTSQNLNTRFDIKYG-DGSYAKGKLYKDTVGIGGV---------SVRDQLFANVWST------SARKGILGIGFQSGEA 133 (342)
T ss_dssp CTTCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------CSSSCEEECSCGGGCS
T ss_pred CCCcccCCCcEEEEeC-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEec------CCCcCEEEEccccccC
Confidence 3344556799999997 8888999999999999864 7889999999975 24799999998754
Q ss_pred ------chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 187 ------SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 187 ------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
+++.+|.+++.+ +++||+||.+....+|.|+|||+|+ +++.|++.|+|++. ..
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~ 193 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDK------AKYSGSLVDLPITS--------------EK 193 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET------TSBSSCCEEEECCC--------------SS
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccch------hhEecceEEEeccC--------------Cc
Confidence 688899999888 4789999998545689999999986 57889999999975 35
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.+++|+|+++.+.. ...+||||||++++||+++|++|.+++.+... +.+.........|+
T Consensus 194 ~~~v~l~~i~v~g~~~~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~~~~~~~~~C~---- 257 (342)
T 2qzx_A 194 KLTVGLRSVNVRGRNVDA-----------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMK-FDSAGNKVYVADCK---- 257 (342)
T ss_dssp SCEEEEEEEEETTEEEEE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-ECTTSCEEEEECTT----
T ss_pred eEEEEEeEEEECCEecCC-----------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee-eccCCCcEEEEECC----
Confidence 899999999999988753 24699999999999999999999999876542 11111101123454
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeC-----CCeEEEEEEeCCCCCCCceeechhhccceEEEEeCCCCe
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVR-----DDVLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSR 414 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~r 414 (437)
.+|.|+|+|.+ +.+|+||+++|++... .+..|+..+... +.||||+.|||++|+|||++++|
T Consensus 258 --------~~p~i~f~f~~-g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~ 324 (342)
T 2qzx_A 258 --------TSGTIDFQFGN-NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKK 324 (342)
T ss_dssp --------CCCEEEEEETT-TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTE
T ss_pred --------CCCcEEEEECC-CcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCE
Confidence 26899999964 5999999999998642 235798644332 25899999999999999999999
Q ss_pred EEEeecCc
Q 036132 415 LGFSSSLL 422 (437)
Q Consensus 415 IGfa~~~~ 422 (437)
||||+...
T Consensus 325 igfA~~~~ 332 (342)
T 2qzx_A 325 ISMAPVKY 332 (342)
T ss_dssp EEEEEBCC
T ss_pred EEEEeeCC
Confidence 99998633
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4.4e-52 Score=411.49 Aligned_cols=312 Identities=20% Similarity=0.231 Sum_probs=245.5
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
.++||++. .+.+|+++|.||||+|+++|+|||||+++||+|..| .+..|.....+++. .+++
T Consensus 3 ~~~~l~~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~SsT 64 (329)
T 1dpj_A 3 HDVPLTNY-LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC-----------GSLACFLHSKYDHE------ASSS 64 (329)
T ss_dssp EEEECEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTT
T ss_pred cceeeeec-CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCC-----------CCcccCCcCcCCcc------cCcC
Confidence 46899874 478999999999999999999999999999999866 33356554444443 1334
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCcc-CCCCCCcceEeecCCCCCc---
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLL-EGLASGVKGMAGLGRTRIS--- 187 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~-~~~~~~~~GIlGLg~~~~s--- 187 (437)
+..+.|.|.+.|+ ++ .++|.+++|+|++++. +++++.|||++.... .+.....+||||||+...+
T Consensus 65 ~~~~~~~~~i~Yg-~G-s~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 65 YKANGTEFAIQYG-TG-SLEGYISQDTLSIGDL---------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp CEEEEEEEEEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGG
T ss_pred eEECCcEEEEEEC-Cc-eEEEEEEEEEEEECCe---------EECCeEEEEEEecCccccccCCcceEEEeCCchhhccC
Confidence 4556799999997 76 7999999999999864 788999999987632 1123467999999998765
Q ss_pred ---hHhhhhhccCC-CcceEEecCCCC---CCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcc
Q 036132 188 ---LPSQFSAAFSF-DRKFAICLSSSS---RVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAE 260 (437)
Q Consensus 188 ---~~~ql~~~~~i-~~~FS~~L~~~~---~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~ 260 (437)
+..+|.+++.+ +++||+||.+.. ..+|.|+|||+|+ +++.|++.|+|+.. +.+
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~ 193 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDE------SKFKGDITWLPVRR--------------KAY 193 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCG------GGEEEEEEEEECSS--------------BTT
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCCh------hhcCCceEEEEcCC--------------Cce
Confidence 34567777777 478999998752 2479999999986 56889999999974 468
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCC
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFV 340 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~ 340 (437)
|.|.+++|+|+++.+... ...+||||||++++||+++|++|.+++.+.. . ........|...
T Consensus 194 ~~v~l~~i~v~~~~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---~--~~g~~~~~C~~~--- 255 (329)
T 1dpj_A 194 WEVKFEGIGLGDEYAELE----------SHGAAIDTGTSLITLPSGLAEMINAEIGAKK---G--WTGQYTLDCNTR--- 255 (329)
T ss_dssp BEEEEEEEEETTEEEECS----------SCEEEECTTCSCEEECHHHHHHHHHHHTCEE---C--TTSSEEECGGGG---
T ss_pred EEEEeeeEEECCeEecCC----------CccEEeeCCCCcEECCHHHHHHHHHHhCCcc---C--CCCeEEEECCCC---
Confidence 999999999999887532 3679999999999999999999998875431 1 111112356543
Q ss_pred CCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccceEEEEeCCCCeEEE
Q 036132 341 GSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGV--NPRTSIVIGGHQLEDNLLQFDLATSRLGF 417 (437)
Q Consensus 341 ~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGf 417 (437)
..+|.|+|+|+| .+|+||+++|++... ..|+ ++..... ...+.||||+.|||++|+|||++++||||
T Consensus 256 ------~~~P~i~f~f~g--~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igf 325 (329)
T 1dpj_A 256 ------DNLPDLIFNFNG--YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGL 325 (329)
T ss_dssp ------GGCCCEEEEETT--EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ------CcCCcEEEEECC--EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEE
Confidence 368999999987 899999999998764 5898 5765421 12357999999999999999999999999
Q ss_pred eec
Q 036132 418 SSS 420 (437)
Q Consensus 418 a~~ 420 (437)
|+.
T Consensus 326 A~~ 328 (329)
T 1dpj_A 326 AKA 328 (329)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 14
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.7e-52 Score=414.76 Aligned_cols=320 Identities=18% Similarity=0.237 Sum_probs=252.0
Q ss_pred CcceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCC
Q 036132 29 PKALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPP 108 (437)
Q Consensus 29 ~~~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~ 108 (437)
.+...+||++. .+.+|+++|.||||||+++|+|||||+++||+|..|.. ....|.....+++. .
T Consensus 5 ~~~~~~~l~n~-~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~---------~~~~C~~~~~y~~~------~ 68 (341)
T 3k1w_A 5 NTTSSVILTNY-MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDAS------D 68 (341)
T ss_dssp CBCEEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TCHHHHTSCCBCGG------G
T ss_pred CCCccccceEc-cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCC---------CCCcccCCCCCCCC------c
Confidence 45678999984 58899999999999999999999999999999987631 12356555445443 1
Q ss_pred CCCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCCCc
Q 036132 109 RPGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTRIS 187 (437)
Q Consensus 109 ~~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s 187 (437)
++++....|.|.+.|+ +++ ++|.+++|+|++++. ++ +++|||++..... +.....+||||||+...+
T Consensus 69 SsT~~~~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 69 SSSYKHNGTELTLRYS-TGT-VSGFLSQDIITVGGI---------TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp CTTCEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred CcCeeECCCEEEEEEC-CcE-EEEEEEEEEEEECCc---------ee-eEEEEEEEEccccccccCCcceEEECCchhhc
Confidence 3344556799999997 765 999999999999875 78 9999999986332 223567999999997654
Q ss_pred ------hHhhhhhccCC-CcceEEecCCCC----CCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCC
Q 036132 188 ------LPSQFSAAFSF-DRKFAICLSSSS----RVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGE 256 (437)
Q Consensus 188 ------~~~ql~~~~~i-~~~FS~~L~~~~----~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~ 256 (437)
++.+|.+++.| +++||+||.+.. ..+|.|+|||+|+ +++.|++.|+|+..
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~------------- 197 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP------QHYEGNFHYINLIK------------- 197 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCG------GGEEEEEEEEECSS-------------
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccCh------HHccCceEEEecCC-------------
Confidence 67888888877 478999999863 3489999999996 57889999999974
Q ss_pred CCcceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccc
Q 036132 257 PSAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFN 336 (437)
Q Consensus 257 ~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~ 336 (437)
..+|.|.+++|+|+++.+..+. ...+||||||++++||++++++|.+++..... . . +....|..
T Consensus 198 -~~~w~v~l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~---~--~-g~~~~C~~ 261 (341)
T 3k1w_A 198 -TGVWQIQMKGVSVGSSTLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR---L--F-DYVVKCNE 261 (341)
T ss_dssp -TTSCEEEECCEEETTEEEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC---S--S-CEEEEGGG
T ss_pred -CCEEEEEEeEEEECCEEeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec---C--C-CeEEeCCC
Confidence 4689999999999998754321 35799999999999999999999998854321 1 1 13345765
Q ss_pred cCCCCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhccceEEEEeCC
Q 036132 337 STFVGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGV--NPRTSIVIGGHQLEDNLLQFDLA 411 (437)
Q Consensus 337 ~~~~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e 411 (437)
. ..+|+|+|+|+| .+++||+++|++.... +..|+ ++..... .....||||+.|||++|+|||++
T Consensus 262 ~---------~~~p~i~f~f~g--~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~ 330 (341)
T 3k1w_A 262 G---------PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRR 330 (341)
T ss_dssp G---------GGCCCEEEEETT--EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETT
T ss_pred C---------CcCCcEEEEECC--EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCC
Confidence 4 358999999987 9999999999987542 57898 5665321 12357999999999999999999
Q ss_pred CCeEEEeecCc
Q 036132 412 TSRLGFSSSLL 422 (437)
Q Consensus 412 ~~rIGfa~~~~ 422 (437)
++|||||+++|
T Consensus 331 ~~~igfA~a~~ 341 (341)
T 3k1w_A 331 NNRIGFALARH 341 (341)
T ss_dssp TTEEEEEEECC
T ss_pred CCEEEEEECCC
Confidence 99999999754
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.3e-52 Score=413.43 Aligned_cols=311 Identities=17% Similarity=0.249 Sum_probs=245.6
Q ss_pred EeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCC
Q 036132 34 LPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCN 113 (437)
Q Consensus 34 ~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~ 113 (437)
+||+ ..+.+|+++|.||||+|+++|+|||||+++||+|..| .+..|.....+++. .++++.
T Consensus 5 ~~l~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~SsT~~ 65 (329)
T 1htr_B 5 EPMA--YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYC-----------QSQACTSHSRFNPS------ESSTYS 65 (329)
T ss_dssp CGGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTTCE
T ss_pred eeeE--EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CCcccCCCCcCCCc------cCCCeE
Confidence 6787 4789999999999999999999999999999999866 33456554444433 133445
Q ss_pred CCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc-----
Q 036132 114 NDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS----- 187 (437)
Q Consensus 114 ~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s----- 187 (437)
...|.|.+.|+ +++ +.|.+++|+|++++. +++++.|||+.......+ ....+||||||+...+
T Consensus 66 ~~~~~~~i~Yg-~gs-~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 134 (329)
T 1htr_B 66 TNGQTFSLQYG-SGS-LTGFFGYDTLTVQSI---------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEAT 134 (329)
T ss_dssp EEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCC
T ss_pred ECCcEEEEEeC-CCC-eEEEEEeeeEEEcce---------EECceEEEEEEEccccccccCCCceEEecCCCcccccCCC
Confidence 56799999997 765 599999999999864 788999999998633222 3468999999987654
Q ss_pred -hHhhhhhccCC-CcceEEecCCCCCC-ceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEe
Q 036132 188 -LPSQFSAAFSF-DRKFAICLSSSSRV-NGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIG 264 (437)
Q Consensus 188 -~~~ql~~~~~i-~~~FS~~L~~~~~~-~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~ 264 (437)
++.+|.+++.+ +++||+||.+.... +|.|+|||+|+ +++.|++.|+|++. ..+|.|.
T Consensus 135 ~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~~~v~ 194 (329)
T 1htr_B 135 TAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDS------SLYTGQIYWAPVTQ--------------ELYWQIG 194 (329)
T ss_dssp SHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCG------GGEEEEEEEEEBCS--------------SSSCEEE
T ss_pred CHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCH------HHcCCceEEEECCC--------------CceEEEE
Confidence 67788888777 57899999986333 89999999986 56789999999974 4689999
Q ss_pred EeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCCC
Q 036132 265 VKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGSTR 344 (437)
Q Consensus 265 l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 344 (437)
+++|+|+++.+... .....+||||||++++||+++|++|.+++..... ........|+..
T Consensus 195 l~~i~v~~~~~~~~--------~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~------- 254 (329)
T 1htr_B 195 IEEFLIGGQASGWC--------SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSI------- 254 (329)
T ss_dssp ECEEEETTEECCTT--------TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGG-------
T ss_pred EeEEEECCceeeec--------CCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCc-------
Confidence 99999999875411 1136799999999999999999999988764321 111223468764
Q ss_pred CCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCC--CCCC-ceeechhhccceEEEEeCCCCeEEEeec
Q 036132 345 VGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGV--NPRT-SIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 345 ~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~--~~~~-~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
..+|+|+|+|+| .+|+||+++|++... + .|+ ++..... ...+ .||||+.|||++|+|||++++|||||+.
T Consensus 255 --~~~P~i~f~f~g--~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 255 --QNLPSLTFIING--VEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp --GGSCCEEEEETT--EEEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred --ccCCcEEEEECC--EEEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeC
Confidence 358999999976 999999999998876 3 898 5665431 1234 7999999999999999999999999985
No 16
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.9e-52 Score=412.48 Aligned_cols=308 Identities=18% Similarity=0.169 Sum_probs=242.1
Q ss_pred EeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCC
Q 036132 34 LPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCN 113 (437)
Q Consensus 34 ~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~ 113 (437)
.||++. .+.+|+++|.||||||+++|+|||||+++||+|..| .+..|.....+++. .++++.
T Consensus 3 ~~l~n~-~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~SsT~~ 64 (320)
T 4aa9_A 3 EPLTSY-LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYC-----------KSNVCKNHHRFDPR------KSSTFR 64 (320)
T ss_dssp -----C-CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTTCE
T ss_pred ccceec-cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCC-----------CccccCCCCCCCCC------CCcCeE
Confidence 577763 588999999999999999999999999999999765 34456655555443 133445
Q ss_pred CCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCC------C
Q 036132 114 NDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTR------I 186 (437)
Q Consensus 114 ~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~------~ 186 (437)
...|.|.+.|+ +++ +.|.+++|+|++++. +++++.|||++..... ......+||||||+.. .
T Consensus 65 ~~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 133 (320)
T 4aa9_A 65 NLGKPLSIHYG-TGS-MEGFLGYDTVTVSNI---------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSV 133 (320)
T ss_dssp EEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCC
T ss_pred cCCcEEEEEEC-CcE-EEEEEEEEEEEECCE---------eecCeEEEEEEEcccccccccCcccEEecCcccccccCCC
Confidence 56789999997 765 899999999999875 7889999999886321 1124579999999864 3
Q ss_pred chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEeE
Q 036132 187 SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIGV 265 (437)
Q Consensus 187 s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l 265 (437)
++..+|.+++.| +++||+||.+. ...|.|+|||+|+ +++.|++.|+|+.. ..+|.|.+
T Consensus 134 ~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~w~v~l 192 (320)
T 4aa9_A 134 PVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDP------SYYTGSLHWVPVTL--------------QQYWQFTV 192 (320)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCG------GGEEEEEEEEECSS--------------BTTBEEEE
T ss_pred CHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCH------HHccCceEEEEccc--------------CCceEEEE
Confidence 477889888888 57899999986 5689999999996 57889999999964 46899999
Q ss_pred eeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCCCC
Q 036132 266 KSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGSTRV 345 (437)
Q Consensus 266 ~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 345 (437)
++|+|+++.+..+. ...+||||||++++||++++++|.+++..... ........|...
T Consensus 193 ~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g~~~~~C~~~-------- 250 (320)
T 4aa9_A 193 DSVTINGVAVACVG---------GCQAILDTGTSVLFGPSSDILKIQMAIGATEN-----RYGEFDVNCGNL-------- 250 (320)
T ss_dssp CEEEETTEEEESTT---------CEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----TTSCEEECGGGG--------
T ss_pred eEEEECCEEeccCC---------CcEEEEECCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEeCCCC--------
Confidence 99999998875431 35799999999999999999999988754311 111223467754
Q ss_pred CCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 346 GPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 346 ~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
..+|+|+|+|+| .+++||+++|+... +..|+ ++..... .+.||||+.|||++|+|||++++|||||+.
T Consensus 251 -~~~p~i~f~f~g--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 251 -RSMPTVVFEING--RDYPLSPSAYTSKD--QGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp -GGCCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred -CcCceEEEEECC--EEEEECHHHhccCC--CCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEec
Confidence 358999999987 99999999999763 46898 4666332 346999999999999999999999999985
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=9.8e-52 Score=410.52 Aligned_cols=311 Identities=16% Similarity=0.251 Sum_probs=245.0
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCC-ccccccccCCccccCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRS-AQCNLARSKSCVQSCFSPPR 109 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~-~~c~~~~~~~c~~~~~~~~~ 109 (437)
.+.+||++ .+.+|+++|.||||||+++|+|||||+++||++.. ..|.. ..|.....|... .+
T Consensus 2 ~i~~~l~~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~---------~~C~~~~~C~~~~~y~~~------~S 64 (339)
T 3fv3_A 2 SISLSLIN--EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSN---------AQCGKGVDCKSSGTFTPS------SS 64 (339)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEE---------EEECTTCCTTTTCCBCGG------GC
T ss_pred ceeeEEEc--CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCC---------CCCCCCCCCCCCCcCCCc------cC
Confidence 47899998 67899999999999999999999999999999542 01111 135444334332 12
Q ss_pred CCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCCc--
Q 036132 110 PGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 110 ~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s-- 187 (437)
+++....|.|.+.|+ +++.+.|.+++|+|++++. +++++.|||++... ..+||||||+...+
T Consensus 65 sT~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~ 128 (339)
T 3fv3_A 65 SSYKNLGAAFTIRYG-DGSTSQGTWGKDTVTINGV---------SITGQQIADVTQTS------VDQGILGIGYTSNEAV 128 (339)
T ss_dssp TTCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCCC
T ss_pred cceeeCCceEEEEEC-CCceEEEEEEEEEEEECCE---------EECceEEEEEEecC------CCceeEEecCcccccc
Confidence 333455799999998 8889999999999999875 78899999999862 36999999987542
Q ss_pred --------------hHhhhhhccCCC-cceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcc
Q 036132 188 --------------LPSQFSAAFSFD-RKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAF 252 (437)
Q Consensus 188 --------------~~~ql~~~~~i~-~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~ 252 (437)
++.+|.+++.|+ ++||+||.+.....|.|+|||+|+ +++.|++.|+|++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------- 193 (339)
T 3fv3_A 129 YDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDN------AKYSGKLVAEQVTS--------- 193 (339)
T ss_dssp BCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET------TSBSSCCEEEEBCC---------
T ss_pred ccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeech------HHeecceEEEeccc---------
Confidence 788999998884 789999998655689999999986 57889999999975
Q ss_pred cCCCCCcceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 036132 253 FEGEPSAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFG 332 (437)
Q Consensus 253 ~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 332 (437)
..+|.|.+++|+|+++.+... ..++|||||++++||+++|++|.+++.......+. .......
T Consensus 194 -----~~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~-~~~~~~~ 256 (339)
T 3fv3_A 194 -----SQALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVAR-DQYLYFI 256 (339)
T ss_dssp -----SSSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEET-TEEEEEE
T ss_pred -----CccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccc-cCceEEE
Confidence 358999999999999877532 46999999999999999999999998754321000 0111234
Q ss_pred cccccCCCCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEE-EEEEeCCCCCCCceeechhhccceEEEEeCC
Q 036132 333 ACFNSTFVGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLC-LGFVDGGVNPRTSIVIGGHQLEDNLLQFDLA 411 (437)
Q Consensus 333 ~C~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C-~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e 411 (437)
.|+. ..+|.|+|+|++ +++++||+++|++...+ ..| +++... +.||||+.|||++|+|||++
T Consensus 257 ~C~~----------~~~p~i~f~f~~-g~~~~v~~~~~~~~~~~-~~C~~~i~~~-----~~~ilG~~fl~~~y~vfD~~ 319 (339)
T 3fv3_A 257 DCNT----------DTSGTTVFNFGN-GAKITVPNTEYVYQNGD-GTCLWGIQPS-----DDTILGDNFLRHAYLLYNLD 319 (339)
T ss_dssp CTTC----------CCCSEEEEEETT-SCEEEEEGGGGEEECSS-SCEEESEEEC-----SSCEECHHHHTTEEEEEETT
T ss_pred ecCC----------CCCCcEEEEECC-CCEEEECHHHheeeCCC-CeEEEEEEeC-----CcEEeChHHHhCEEEEEECC
Confidence 6764 147999999974 48999999999987654 457 567662 36999999999999999999
Q ss_pred CCeEEEeecCcc
Q 036132 412 TSRLGFSSSLLF 423 (437)
Q Consensus 412 ~~rIGfa~~~~~ 423 (437)
++|||||+.+..
T Consensus 320 ~~~igfA~~~~~ 331 (339)
T 3fv3_A 320 ANTISIAQVKYT 331 (339)
T ss_dssp TTEEEEEEBCCC
T ss_pred CCEEEEEecCCC
Confidence 999999986433
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.9e-52 Score=411.23 Aligned_cols=316 Identities=15% Similarity=0.228 Sum_probs=243.2
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCC--CCCCCCcccccCCCccccccccCCccccCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQ--GYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPR 109 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~--c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~ 109 (437)
+.+|+++ .+.+|+++|.||||||+++|+|||||+++||+|.. |..... ......|.....|++. .+
T Consensus 3 v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~------~S 70 (342)
T 3pvk_A 3 VPVTLHN--EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYS----DQTADFCKQKGTYDPS------GS 70 (342)
T ss_dssp EEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGTTCCBCGG------GC
T ss_pred cceEEec--CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccc----ccccCCCCCCCcCCCc------cC
Confidence 6788887 68899999999999999999999999999998643 311000 0022356555444433 12
Q ss_pred CCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCC----
Q 036132 110 PGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTR---- 185 (437)
Q Consensus 110 ~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~---- 185 (437)
+++....|.|.+.|+ +++.+.|.+++|+|++++. +++++.|||++... ..+||||||+..
T Consensus 71 sT~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~ 134 (342)
T 3pvk_A 71 SASQDLNTPFKIGYG-DGSSSQGTLYKDTVGFGGV---------SIKNQVLADVDSTS------IDQGILGVGYKTNEAG 134 (342)
T ss_dssp TTCEEEEEEEEEECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCSS
T ss_pred cceeecCCeEEEEec-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEccC------CCccEEEecCcccccc
Confidence 333455789999998 8888999999999999865 78899999998762 479999999976
Q ss_pred ---CchHhhhhhccCCC-cceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcce
Q 036132 186 ---ISLPSQFSAAFSFD-RKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEY 261 (437)
Q Consensus 186 ---~s~~~ql~~~~~i~-~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y 261 (437)
.+++.+|.+++.|. ++||+||.+.....|.|+|||+|. +++.|++.|+|++. ..+|
T Consensus 135 ~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~~ 194 (342)
T 3pvk_A 135 GSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDN------AKYSGSLIALPVTS--------------DREL 194 (342)
T ss_dssp CSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET------TSBSSCCEEEECCC--------------SSSC
T ss_pred ccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCc------cceeeeeEEeecCc--------------cceE
Confidence 46899999998884 789999988655689999999986 57889999999975 3589
Q ss_pred EEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCC
Q 036132 262 FIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVG 341 (437)
Q Consensus 262 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~ 341 (437)
.|.+++|+|+++.+..+ ...+||||||++++||+++|++|.+++...... . ... ..+|..+|.
T Consensus 195 ~v~l~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-~---~~~--~~~~~~~C~- 257 (342)
T 3pvk_A 195 RISLGSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ-D---SNG--NSFYEVDCN- 257 (342)
T ss_dssp EEEEEEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-C---TTS--CEEEEECSC-
T ss_pred EEEEeEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-c---CCC--ceEEEEecC-
Confidence 99999999999987542 257999999999999999999999988655321 1 011 112333331
Q ss_pred CCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeC--CC---eEEEEEEeCCCCCCCceeechhhccceEEEEeCCCCeEE
Q 036132 342 STRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVR--DD---VLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLG 416 (437)
Q Consensus 342 ~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIG 416 (437)
..|.|+|+|++ +.+++||+++|++... ++ ..|+..+... +.||||+.|||++|+|||++++|||
T Consensus 258 ------~~p~i~f~f~~-g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~ig 326 (342)
T 3pvk_A 258 ------LSGDVVFNFSK-NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEIS 326 (342)
T ss_dssp ------CCSEEEEEEST-TCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEE
T ss_pred ------CCCceEEEECC-CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEE
Confidence 24999999985 4889999999998632 22 6797443332 3689999999999999999999999
Q ss_pred EeecCcc
Q 036132 417 FSSSLLF 423 (437)
Q Consensus 417 fa~~~~~ 423 (437)
||+.+..
T Consensus 327 fA~~~~~ 333 (342)
T 3pvk_A 327 LAQVKYT 333 (342)
T ss_dssp EEEBCCC
T ss_pred EEecCCC
Confidence 9986443
No 19
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.3e-51 Score=406.35 Aligned_cols=309 Identities=18% Similarity=0.196 Sum_probs=236.9
Q ss_pred EEeEe-eCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 33 LLPVT-KDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 33 ~~Pl~-~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
++|+. ....+.+|+++|.||||+|+++|+|||||+++||+|.+|. +..|.....+++. .+++
T Consensus 4 ~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~~~~~~~y~~~------~SsT 66 (329)
T 3c9x_A 4 SAPNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-----------KSSATGHAIYTPS------KSST 66 (329)
T ss_dssp EEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-----------HHHHTTSCCBCGG------GCTT
T ss_pred ceeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-----------ccccCCCCcCCcc------cCcC
Confidence 45666 5557889999999999999999999999999999998762 1123333333332 1233
Q ss_pred CCC-CCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc--
Q 036132 112 CNN-DTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 112 ~~~-~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s-- 187 (437)
+.. +.|.|.+.|+ +++.++|.+++|+|++++. ++++++|||++....... ....+||||||+...+
T Consensus 67 ~~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 136 (329)
T 3c9x_A 67 SKKVSGASWSISYG-DGSSSSGDVYTDKVTIGGF---------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQV 136 (329)
T ss_dssp CEECTTCBEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred ceEcCCCeEEEEeC-CCCcEEEEEEEEEEEECCE---------EEcceEEEEEEecCccccccCCCceeEEeCccccccc
Confidence 443 5789999998 8888999999999999864 788999999987532211 1467999999987543
Q ss_pred -------hHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 188 -------LPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 188 -------~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
+..+|.++ + +++||+||.+. .+|.|+|||+|+ +++.|++.|+|++.. ..
T Consensus 137 ~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~ 193 (329)
T 3c9x_A 137 RPHPQKTWFSNAASS--LAEPLFTADLRHG--QNGSYNFGYIDT------SVAKGPVAYTPVDNS-------------QG 193 (329)
T ss_dssp BSSCCCCHHHHHHTT--SSSSEEEEECCSS--SCEEEEESSCCG------GGCSSCEEEEECBCT-------------TS
T ss_pred CCCCCCCHHHHHHHh--cCCCEEEEEecCC--CCcEEEEeCcCh------hhcccceEEEEccCC-------------Cc
Confidence 55666654 5 57899999873 589999999996 578899999999753 46
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.+++|+|+++.+... ...+||||||++++||+++|++|.+++.... +... .......|+
T Consensus 194 ~~~v~l~~i~v~~~~~~~~----------~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~-~~~~~~~C~---- 256 (329)
T 3c9x_A 194 FWEFTASGYSVGGGKLNRN----------SIDGIADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQ-QEGVVFDCD---- 256 (329)
T ss_dssp SCEEEECCEEETTCCCCSC----------CEEEEECTTCCSEEECHHHHHHHHTTCTTCE--EETT-TTEEEEETT----
T ss_pred eEEEEEeeEEECCEeccCC----------CceEEEECCCCcEeCCHHHHHHHHHhCCCcE--EcCC-CCEEEEECC----
Confidence 8999999999999765311 3579999999999999999998887663321 1110 011123576
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccceEEEEeCCCCeEE
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCLG-FVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLG 416 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIG 416 (437)
..+|+|+|+|+| .+|+||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||++++|||
T Consensus 257 -------~~~P~i~f~f~g--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riG 325 (329)
T 3c9x_A 257 -------EDLPSFSFGVGS--STITIPGDLLNLTPLEEGSSTCFGGLQSSSG--IGINIFGDVALKAALVVFDLGNERLG 325 (329)
T ss_dssp -------CCCCCEEEEETT--EEEEECGGGGEEEESSTTCSEEEESEEECTT--TTSEEECHHHHTTEEEEEETTTTEEE
T ss_pred -------CCCCcEEEEECC--EEEEECHHHeeeeccCCCCCeEEEEEEcCCC--CCcEEEChHHhccEEEEEECCCCEEe
Confidence 248999999987 8999999999887633 379986 555432 35799999999999999999999999
Q ss_pred Eee
Q 036132 417 FSS 419 (437)
Q Consensus 417 fa~ 419 (437)
||+
T Consensus 326 fA~ 328 (329)
T 3c9x_A 326 WAQ 328 (329)
T ss_dssp EEE
T ss_pred Eec
Confidence 997
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.3e-51 Score=414.99 Aligned_cols=310 Identities=14% Similarity=0.202 Sum_probs=247.6
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
...+||++ ..+.+|+++|.||||+|+++|+|||||+++||+|..| .+..|.....++++ .++
T Consensus 51 ~~~~pl~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~Ss 112 (375)
T 1miq_A 51 NDVIELDD-VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKC-----------NSSGCSIKNLYDSS------KSK 112 (375)
T ss_dssp TBCCCGGG-TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTC-----------CSSGGGGSCCBCGG------GCT
T ss_pred cceEEccc-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCC-----------CcccccCCCcCCCc------cCC
Confidence 34578885 4678999999999999999999999999999999765 34457665555544 133
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEecccc----CccCCCCCCcceEeecCCCCC
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAAT----FLLEGLASGVKGMAGLGRTRI 186 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~~ 186 (437)
++....|.|.+.|+ +|+ ++|.+++|+|++++. ++++ .|||++. .. .+.....+||||||++..
T Consensus 113 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 113 SYEKDGTKVDITYG-SGT-VKGFFSKDLVTLGHL---------SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDL 179 (375)
T ss_dssp TCEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCT
T ss_pred ceEECCcEEEEEeC-CCe-EEEEEEEEEEEEcCc---------eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcc
Confidence 44556799999997 766 899999999999864 7888 9999998 42 111246799999998765
Q ss_pred ------chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 187 ------SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 187 ------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
+++.+|.+++.+ +++||+||.+....+|.|+|||+|+ +++.|++.|+|++. ..
T Consensus 180 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~ 239 (375)
T 1miq_A 180 SIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEE------KFYEGNITYEKLNH--------------DL 239 (375)
T ss_dssp TCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG------GGEEEEEEEEEBSS--------------SS
T ss_pred cccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCH------HHcCCceEEEecCC--------------Cc
Confidence 467788888877 4789999998644689999999996 56789999999964 46
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.++ |+|+++.+ . ...+||||||++++||+++|++|.+++.... +.. .......|+. .
T Consensus 240 ~w~v~l~-i~v~g~~~--~----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~-~g~~~~~C~~-~- 300 (375)
T 1miq_A 240 YWQIDLD-VHFGKQTM--E----------KANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPF-LPFYVTTCDN-K- 300 (375)
T ss_dssp SSEEEEE-EEETTEEE--E----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTT-SSCEEEETTC-T-
T ss_pred eEEEEEE-EEECCEEc--c----------cceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCC-CCeEEEECCC-C-
Confidence 8999999 99999876 1 3579999999999999999999999886532 111 1122356875 1
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeC--CCeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEE
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVR--DDVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLG 416 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~--~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIG 416 (437)
.+|+|+|+|+| .+|+||+++|++... ++..|+ +++.... ..+.||||++|||++|+|||++++|||
T Consensus 301 --------~~P~i~f~f~g--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~riG 369 (375)
T 1miq_A 301 --------EMPTLEFKSAN--NTYTLEPEYYMNPILEVDDTLCMITMLPVDI-DSNTFILGDPFMRKYFTVFDYDKESVG 369 (375)
T ss_dssp --------TCCCEEEECSS--CEEEECGGGSEEESSSSSCSEEEESEEECCS-SSSEEEECHHHHHHEEEEEETTTTEEE
T ss_pred --------CCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCC-CCCcEEECHHHhccEEEEEECCCCEEE
Confidence 48999999976 899999999999875 245898 7776543 125799999999999999999999999
Q ss_pred EeecC
Q 036132 417 FSSSL 421 (437)
Q Consensus 417 fa~~~ 421 (437)
||+.+
T Consensus 370 fA~~~ 374 (375)
T 1miq_A 370 FAIAK 374 (375)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99864
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.1e-51 Score=404.55 Aligned_cols=308 Identities=17% Similarity=0.161 Sum_probs=235.0
Q ss_pred EEeEe-eCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 33 LLPVT-KDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 33 ~~Pl~-~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
++|+. ....+.+|+++|.||||+|+++|+|||||+++||+|.+|.. | .| ....+++. .+++
T Consensus 4 ~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~--------~---~~-~~~~y~~~------~SsT 65 (329)
T 1oew_A 4 SATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTA--------S---EV-XQTIYTPS------KSTT 65 (329)
T ss_dssp EEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCG--------G---GC--CCCBCGG------GCTT
T ss_pred eeEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCc--------c---cc-ccCccCCc------cCcc
Confidence 45566 44578899999999999999999999999999999987721 2 23 22233322 1233
Q ss_pred CCC-CCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc--
Q 036132 112 CNN-DTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 112 ~~~-~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s-- 187 (437)
+.. +.|.|.+.|+ +|+.++|++++|+|++++. +++++.|||++....... ....+||||||+...+
T Consensus 66 ~~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 66 AKLLSGATWSISYG-DGSSSSGDVYTDTVSVGGL---------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp CEEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred ceecCCCeEEEEeC-CCCcEEEEEEEEEEEECCE---------EEeeeEEEEEEecCccccccCCCceEEEecccccccc
Confidence 343 4689999997 8888999999999999864 788999999997632211 1467999999987543
Q ss_pred -------hHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 188 -------LPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 188 -------~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
+..+|.++ + +++||+||.+. .+|.|+|||+|+ +++.|++.|+|++.. +.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~~--~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~ 192 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGYH--APGTYNFGFIDT------TAYTGSITYTAVSTK-------------QG 192 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCSS--SCEEEEESCCCT------TSSSSCCEEEECBCT-------------TS
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccCC--CCeEEEEeccCh------HhcccceEEEEccCC-------------Cc
Confidence 55677664 5 57899999873 589999999996 568899999999753 46
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.+++|+|+++.+.. ....+||||||++++||+++|++|.+++.... +.. ........|+.
T Consensus 193 ~~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~--~~~-~~g~~~~~C~~--- 256 (329)
T 1oew_A 193 FWEWTSTGYAVGSGTFKS----------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAK--SSS-SVGGYVFPCSA--- 256 (329)
T ss_dssp SCEEEEEEEEETTSCCEE----------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCE--EET-TTTEEEEETTC---
T ss_pred eEEEEEeeEEECCeeccC----------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcE--EcC-CCCEEEEECCC---
Confidence 899999999999976531 13579999999999999999999887763321 110 01111245762
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccceEEEEeC-CCCeE
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCLG-FVDGGVNPRTSIVIGGHQLEDNLLQFDL-ATSRL 415 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~-e~~rI 415 (437)
.+|+|+|+|+| .+|+||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||+ +++||
T Consensus 257 --------~~P~i~f~fgg--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~ri 324 (329)
T 1oew_A 257 --------TLPSFTFGVGS--ARIVIPGDYIDFGPISTGSSSCFGGIQSSAG--IGINIFGDVALKAAFVVFNGATTPTL 324 (329)
T ss_dssp --------CCCCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEESTT--TSSEEECHHHHTTEEEEEECSSSCEE
T ss_pred --------CCCcEEEEECC--EEEEECHHHeeeeecCCCCCeEEEEEEeCCC--CCceEEChHHhcCEEEEEECCCCceE
Confidence 47999999965 9999999999887532 478986 554432 35799999999999999999 99999
Q ss_pred EEee
Q 036132 416 GFSS 419 (437)
Q Consensus 416 Gfa~ 419 (437)
|||+
T Consensus 325 GfA~ 328 (329)
T 1oew_A 325 GFAS 328 (329)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9997
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.8e-50 Score=414.63 Aligned_cols=332 Identities=17% Similarity=0.214 Sum_probs=246.1
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
...+||++. .+.+|+++|.||||||+++|+|||||+++||+|..|.. +..|..+..|+++ .++
T Consensus 41 ~~~~~l~n~-~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----------~~~C~~~~~y~~~------~Ss 103 (478)
T 1qdm_A 41 GDIVALKNY-MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----------SIACYLHSRYKAG------ASS 103 (478)
T ss_dssp SCSGGGCCG-GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----------CGGGGGSCCBCGG------GCT
T ss_pred CceEEeEec-cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----------CccccCCCCCCcc------cCC
Confidence 455888874 57899999999999999999999999999999987731 2346554444433 234
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCCCc--
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 187 (437)
++..+.|.|.+.|+ +|+ ++|++++|+|++++. ++++++|||++..... +.....+||||||+...+
T Consensus 104 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 104 TYKKNGKPAAIQYG-TGS-IAGYFSEDSVTVGDL---------VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp TCBCCCCEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGG
T ss_pred CeeeCCcEEEEEcC-CCC-eEEEEEEEEEEECCe---------EECCEEEEEEEecCCcccccccccceecccccccccC
Confidence 45567799999997 765 899999999999864 7889999999876322 123467999999998765
Q ss_pred ----hHhhhhhccCC-CcceEEecCCCC--CCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcc
Q 036132 188 ----LPSQFSAAFSF-DRKFAICLSSSS--RVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAE 260 (437)
Q Consensus 188 ----~~~ql~~~~~i-~~~FS~~L~~~~--~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~ 260 (437)
+..+|.+++.+ +++||+||.+.. ..+|.|+|||+|+ +++.|++.|+|+.. ..+
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~------~~~~G~l~~~pv~~--------------~~~ 232 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDP------KHYVGEHTYVPVTQ--------------KGY 232 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCT------TSEEEEEEEEEEEE--------------ETT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCH------hhcCCCceEEeccC--------------CCe
Confidence 34567777777 478999998852 3589999999986 56789999999974 468
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHh---------------------
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEV--------------------- 319 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~--------------------- 319 (437)
|.|.+++|.|+++.+.+.. +...+||||||+++++|+++|++|.+++.+..
T Consensus 233 w~v~l~~i~v~g~~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l 304 (478)
T 1qdm_A 233 WQFDMGDVLVGGKSTGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLL 304 (478)
T ss_dssp EEEEECCEEETTEECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHH
T ss_pred EEEEEeEEEECCEEEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhh
Confidence 9999999999998875432 13689999999999999999999998875310
Q ss_pred -hcCCC-----------CCC----------C-C-----------------------------------------CCCccc
Q 036132 320 -ANIPR-----------VTP----------V-A-----------------------------------------PFGACF 335 (437)
Q Consensus 320 -~~~~~-----------~~~----------~-~-----------------------------------------~~~~C~ 335 (437)
...++ ... + . ....|+
T Consensus 305 ~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~ 384 (478)
T 1qdm_A 305 LAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCN 384 (478)
T ss_dssp HTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred hhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhh
Confidence 00000 000 0 0 001344
Q ss_pred ccCCCC-CCC----CCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEEE-EEeCCC--CCCCceeechhhccceE
Q 036132 336 NSTFVG-STR----VGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCLG-FVDGGV--NPRTSIVIGGHQLEDNL 405 (437)
Q Consensus 336 ~~~~~~-~~~----~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ILG~~flr~~y 405 (437)
..+... ... ....+|+|+|+|+| ++|+|+|++|++.... +..|++ +..... ...+.||||++|||++|
T Consensus 385 ~~~~~~g~~~v~C~~~~~lP~i~f~~gg--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y 462 (478)
T 1qdm_A 385 RLPSPMGESAVDCGSLGSMPDIEFTIGG--KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYH 462 (478)
T ss_dssp CBCCSSSCCEECGGGGTTCCCEEEEETT--EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEE
T ss_pred ccCCCCCeEEeecccccccccEEEEECC--EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEE
Confidence 332110 000 01468999999987 9999999999998754 358985 665431 12457999999999999
Q ss_pred EEEeCCCCeEEEeec
Q 036132 406 LQFDLATSRLGFSSS 420 (437)
Q Consensus 406 vvFD~e~~rIGfa~~ 420 (437)
+|||++|+|||||+.
T Consensus 463 ~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 463 TVFDYGKLRIGFAKA 477 (478)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEECCCCEEEEEeC
Confidence 999999999999984
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.2e-51 Score=402.50 Aligned_cols=309 Identities=17% Similarity=0.183 Sum_probs=240.8
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccc--cccccCCccccCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQC--NLARSKSCVQSCFSPPR 109 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c--~~~~~~~c~~~~~~~~~ 109 (437)
+..||++ ..+.+|+++|.|| +|+++|+|||||+++||+|..| .+..| .....++++ .+
T Consensus 7 ~~~~l~n-~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~~~y~~~------~S 66 (330)
T 1yg9_A 7 LYKLVHV-FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQEC-----------VGGACVCPNLQKYEKL------KP 66 (330)
T ss_dssp SCSCEEE-EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTC-----------CSGGGGSTTCCCCCCS------SC
T ss_pred eEeeeec-CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC-----------CCccCcccccCccCCC------CC
Confidence 4467776 3578999999999 7999999999999999999866 33456 444444433 12
Q ss_pred CCCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCCc--
Q 036132 110 PGCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRIS-- 187 (437)
Q Consensus 110 ~~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s-- 187 (437)
++....+.|.+.|+ +++ +.|.+++|+|++++. ++++++|||++.....+.....+||||||+...+
T Consensus 67 -T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~ 134 (330)
T 1yg9_A 67 -KYISDGNVQVKFFD-TGS-AVGRGIEDSLTISQL---------TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNA 134 (330)
T ss_dssp -EEEEEEEEEEEETT-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCT
T ss_pred -ceEECCCEEEEEEC-Cce-EEEEEEEEEEEECCE---------EEcCeEEEEEEEcccccccccCceEEEcCcchhccc
Confidence 34445688999997 765 599999999999864 7889999999986111112457999999998765
Q ss_pred -----hHhhhhhccCCCcceEEecCCCCC--CceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcc
Q 036132 188 -----LPSQFSAAFSFDRKFAICLSSSSR--VNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAE 260 (437)
Q Consensus 188 -----~~~ql~~~~~i~~~FS~~L~~~~~--~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~ 260 (437)
++.+|.+++.++++||+||.+..+ .+|.|+|||+|+ +++.|++.|+|+.. +.+
T Consensus 135 ~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~ 194 (330)
T 1yg9_A 135 LKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDW------KYVDGEFTYVPLVG--------------DDS 194 (330)
T ss_dssp TSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCG------GGEEEEEEEEEBSC--------------TTS
T ss_pred cCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCH------HHccCceEEEECCC--------------CCE
Confidence 778888887777889999988522 389999999996 56889999999973 468
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCC-CCcccccCC
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAP-FGACFNSTF 339 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~C~~~~~ 339 (437)
|.|.+++|+|+++.+. . ....+||||||++++||+++|++|.+++.+... ....... ...|+..
T Consensus 195 w~v~l~~i~v~~~~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~~g~~~~~~~~C~~~-- 259 (330)
T 1yg9_A 195 WKFRLDGVKIGDTTVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE---KTTTRRICKLDCSKI-- 259 (330)
T ss_dssp CCEECSEEEETTEEEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE---ECSSCEEEEECGGGG--
T ss_pred EEEEeCeEEECCEEEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCccc---CCCceEEEEEECCCc--
Confidence 9999999999998764 1 136799999999999999999999998854321 0000011 2457653
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCCCeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEe
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRDDVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFS 418 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa 418 (437)
..+|+|+|+|+| .+++||+++|++.. +..|+ ++..... .+.||||+.|||++|+|||++++|||||
T Consensus 260 -------~~~p~i~f~fgg--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfA 326 (330)
T 1yg9_A 260 -------PSLPDVTFVING--RNFNISSQYYIQQN--GNLCYSGFQPCGH--SDHFFIGDFFVDHYYSEFNWENKTMGFG 326 (330)
T ss_dssp -------GGSCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CSSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred -------cccCcEEEEECC--EEEEECHHHhcccC--CCcEEEEEEeCCC--CCeEEecHHHhhheEEEEECCCCEEEEE
Confidence 358999999976 99999999999877 46898 5655421 3479999999999999999999999999
Q ss_pred ec
Q 036132 419 SS 420 (437)
Q Consensus 419 ~~ 420 (437)
+.
T Consensus 327 ~~ 328 (330)
T 1yg9_A 327 RS 328 (330)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 24
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=7e-50 Score=395.02 Aligned_cols=308 Identities=16% Similarity=0.150 Sum_probs=236.4
Q ss_pred EEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCC
Q 036132 33 LLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGC 112 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~ 112 (437)
++|+.....+.+|+++|.|| +|+++|+|||||+++||+|.+|. +..|.....++++ ++++
T Consensus 4 ~v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~-------~Ss~ 63 (325)
T 1ibq_A 4 SAVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-----------SSEQTGHDLYTPS-------SSAT 63 (325)
T ss_dssp EEEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-----------HHHHTTSCCCBCC-------SSCE
T ss_pred eEEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-----------ccccCCCCCCCch-------hcCC
Confidence 45555555789999999999 89999999999999999998762 2234444444432 1112
Q ss_pred CCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCC-CCcceEeecCCCCCc----
Q 036132 113 NNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLA-SGVKGMAGLGRTRIS---- 187 (437)
Q Consensus 113 ~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~-~~~~GIlGLg~~~~s---- 187 (437)
..+.|.|.+.|+ +++.++|++++|+|++++. ++++++|||++........ ...+||||||+...+
T Consensus 64 ~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 133 (325)
T 1ibq_A 64 KLSGYSWDISYG-DGSSASGDVYRDTVTVGGV---------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQP 133 (325)
T ss_dssp ECTTCBEEEECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBS
T ss_pred ccCCCEEEEEeC-CCCEEEEEEEEeEEEECCE---------EEcceEEEEEEecCccccccCCCceEEEeCcccccccCc
Confidence 345799999998 8888999999999999864 7889999999986322211 467999999987543
Q ss_pred -----hHhhhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceE
Q 036132 188 -----LPSQFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYF 262 (437)
Q Consensus 188 -----~~~ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~ 262 (437)
+..+|.++ .-+++||+||.+. .+|.|+|||+|+ +++.|++.|+|++.. ..+|.
T Consensus 134 ~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~~w~ 191 (325)
T 1ibq_A 134 KAQTTFFDTVKSQ-LDSPLFAVQLKHD--APGVYDFGYIDD------SKYTGSITYTDADSS-------------QGYWG 191 (325)
T ss_dssp SCCCCHHHHHGGG-SSSSEEEEEEETT--EEEEEEESSCCG------GGBSSCCEEEECBCT-------------TSSCE
T ss_pred CCCCCHHHHHHHh-cCCcEEEEEecCC--CCceEEECCcCh------hhccCceEEEEcCCC-------------CceEE
Confidence 56788765 2257899999873 589999999996 578899999999753 46899
Q ss_pred EeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCC
Q 036132 263 IGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGS 342 (437)
Q Consensus 263 v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~ 342 (437)
|.+++|+|+++.+.. ....+||||||++++||+++|++|.+++.... +... .......|+.
T Consensus 192 v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~--~~~~-~g~~~~~C~~------ 252 (325)
T 1ibq_A 192 FSTDGYSIGDGSSSS----------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ--ESYE-AGGYVFSCST------ 252 (325)
T ss_dssp EEECEEEETTSCCBS----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCB--CCSS-SSSCEEETTC------
T ss_pred EEECcEEECCeeccC----------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCce--EcCc-CCeEEEEcCC------
Confidence 999999999976531 13579999999999999999999988764321 1111 1112235762
Q ss_pred CCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccceEEEEeCCCCeEEEee
Q 036132 343 TRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCLG-FVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSS 419 (437)
Q Consensus 343 ~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~ 419 (437)
.+|+|+|+|+| .+++||+++|++...+ ...|+. +..... .+.||||+.|||++|+|||++++|||||+
T Consensus 253 -----~~P~i~f~fgg--~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 323 (325)
T 1ibq_A 253 -----DLPDFTVVIGD--YKAVVPGKYINYAPVSTGSSTCYGGIQSNSG--LGLSILGDVFLKSQYVVFNSEGPKLGFAA 323 (325)
T ss_dssp -----CCCCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEECTT--TCSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred -----CCCcEEEEECC--EEEEECHHHhcccccCCCCCeEEEEEEcCCC--CCceEEChHHhcCEEEEEECCCCEEEeee
Confidence 47999999965 9999999999887533 378986 555431 35799999999999999999999999998
Q ss_pred c
Q 036132 420 S 420 (437)
Q Consensus 420 ~ 420 (437)
.
T Consensus 324 ~ 324 (325)
T 1ibq_A 324 Q 324 (325)
T ss_dssp B
T ss_pred C
Confidence 4
No 25
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-49 Score=396.02 Aligned_cols=300 Identities=18% Similarity=0.265 Sum_probs=232.4
Q ss_pred EEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCC
Q 036132 33 LLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGC 112 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~ 112 (437)
++||++ .+.+|+++|.||||+|+++|+|||||+++||+|.+.+.++. ++
T Consensus 4 ~~~l~n--~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~~s~-----------------------------Ss 52 (340)
T 1wkr_A 4 SVPATN--QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKTS-----------------------------TS 52 (340)
T ss_dssp EEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCCCCT-----------------------------TC
T ss_pred cEeeec--cCcEEEEEEEECCCCcEEEEEEeCCChhheecCCCccCCcC-----------------------------Cc
Confidence 689998 46799999999999999999999999999999864321110 00
Q ss_pred CCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCCCCcceEeecCCCCC------
Q 036132 113 NNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLASGVKGMAGLGRTRI------ 186 (437)
Q Consensus 113 ~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~------ 186 (437)
....|.|.+.|+ +++ ++|.+++|+|++++. +++++.|||++... .+ ...+||||||+...
T Consensus 53 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~~g~~---------~v~~~~fg~~~~~~--~~-~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 53 SATSDKVSVTYG-SGS-FSGTEYTDTVTLGSL---------TIPKQSIGVASRDS--GF-DGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp EEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEE--SC-TTCSEEEECSCGGGGTTSEE
T ss_pred cccCceEEEEEC-CcE-EEEEEEEEEEEECCE---------EEcceEEEEEEccC--CC-cCCCcEEECCcccccccccc
Confidence 224688999997 776 899999999999764 78899999999863 22 36899999998654
Q ss_pred --------chHhhhhhccCCC-cceEEecCCC---CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccC
Q 036132 187 --------SLPSQFSAAFSFD-RKFAICLSSS---SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFE 254 (437)
Q Consensus 187 --------s~~~ql~~~~~i~-~~FS~~L~~~---~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~ 254 (437)
+++.+|.+++.|+ ++||+||.+. ....|.|+|||+|+ +++.|++.|+|++....
T Consensus 119 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~~~~-------- 184 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDS------SKYTGSITYTPITSTSP-------- 184 (340)
T ss_dssp SCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCG------GGCSSCCEEEECCSSTT--------
T ss_pred ccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccCh------hhcccceEEEECccCCC--------
Confidence 3566788888774 7899999874 23579999999996 56889999999987531
Q ss_pred CCCCcceEEeEeeEEEcC-EEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 036132 255 GEPSAEYFIGVKSIKING-NTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGA 333 (437)
Q Consensus 255 ~~~~~~y~v~l~~i~v~~-~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 333 (437)
...+|.|. .+|+|++ +.+.. ...+||||||++++||+++|++|.+++.+... . ........
T Consensus 185 --~~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~-~~g~~~~~ 246 (340)
T 1wkr_A 185 --ASAYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD---N-NTGLLRLT 246 (340)
T ss_dssp --GGGSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC---T-TTSSEEEC
T ss_pred --CcceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc---C-CCCeEEee
Confidence 24789999 9999998 77631 24799999999999999999999887754321 1 11112245
Q ss_pred ccccCCCCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeC-------CCeEEE-EEEeCCCC--CCCceeechhhccc
Q 036132 334 CFNSTFVGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVR-------DDVLCL-GFVDGGVN--PRTSIVIGGHQLED 403 (437)
Q Consensus 334 C~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~-------~~~~C~-~~~~~~~~--~~~~~ILG~~flr~ 403 (437)
|... ..+|+|+|.|+| .+|+|+|++|+++.. ....|. .+...... ....||||+.|||+
T Consensus 247 C~~~---------~~~p~i~f~f~g--~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~ 315 (340)
T 1wkr_A 247 TAQY---------ANLQSLFFTIGG--QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLER 315 (340)
T ss_dssp HHHH---------HTCCCEEEEETT--EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTS
T ss_pred cccc---------ccCCcEEEEECC--EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhh
Confidence 7643 258999999987 899999999997643 123564 66653321 12469999999999
Q ss_pred eEEEEeCCCCeEEEeec
Q 036132 404 NLLQFDLATSRLGFSSS 420 (437)
Q Consensus 404 ~yvvFD~e~~rIGfa~~ 420 (437)
+|+|||++++|||||+.
T Consensus 316 ~y~vfD~~~~~igfA~~ 332 (340)
T 1wkr_A 316 FYSVYDTTNKRLGLATT 332 (340)
T ss_dssp EEEEEETTTTEEEEEEC
T ss_pred eEEEEeCCCCeEEEEec
Confidence 99999999999999985
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.6e-50 Score=412.92 Aligned_cols=310 Identities=15% Similarity=0.213 Sum_probs=244.7
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
..+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..| .+..|.....++++ .+++
T Consensus 128 ~~~~L~n-~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C-----------~~~~C~~~~~ydps------~SsT 189 (453)
T 2bju_A 128 DNIELVD-FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-----------TTAGCLTKHLYDSS------KSRT 189 (453)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSTTGGGSCCBCGG------GCTT
T ss_pred CceeeEe-cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCC-----------CccccCCCCcCCCc------cCCc
Confidence 5688885 3678999999999999999999999999999999866 33456655555543 2334
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCc--cCCC-CCCcceEeecCCCCC--
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFL--LEGL-ASGVKGMAGLGRTRI-- 186 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~--~~~~-~~~~~GIlGLg~~~~-- 186 (437)
+....|.|.+.|+ +|+ ++|.+++|+|++++. +++ ++|||++... +..+ ....+||||||++..
T Consensus 190 ~~~~~~~~~i~Yg-dGs-~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 190 YEKDGTKVEMNYV-SGT-VSGFFSKDLVTVGNL---------SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSI 257 (453)
T ss_dssp CEEEEEEEEEECS-SSE-EEEEEEEEEEEETTE---------EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGST
T ss_pred eeECCcEEEEEcC-CCC-eEEEEEEEEEEEeCc---------EEE-EEEEEEEEecccCccccccCCceeEeccCCcccc
Confidence 4556799999997 766 899999999999864 788 9999999873 2111 246799999998754
Q ss_pred ----chHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcce
Q 036132 187 ----SLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEY 261 (437)
Q Consensus 187 ----s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y 261 (437)
+++.+|.+++.+ .++||+||.+....+|.|+|||+|+ +++.|++.|+|+.. ..+|
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~------~~y~G~l~~~pv~~--------------~~~w 317 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEE------RFYEGPLTYEKLNH--------------DLYW 317 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCG------GGEEEEEEEEEEEE--------------ETTE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCH------HHcCCceEEEecCC--------------CceE
Confidence 466788888877 4789999998645689999999996 56789999999975 3689
Q ss_pred EEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCC
Q 036132 262 FIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVG 341 (437)
Q Consensus 262 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~ 341 (437)
.|.++ |+|+++ + + . ...+||||||+++++|+++|++|.+++.+. +..........|+.
T Consensus 318 ~V~l~-I~Vgg~-~-~-----~-----~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v~C~~----- 375 (453)
T 2bju_A 318 QITLD-AHVGNI-M-L-----E-----KANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNN----- 375 (453)
T ss_dssp EEEEE-EEETTE-E-E-----E-----EEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTC-----
T ss_pred EEEEE-EEECcE-E-e-----c-----cccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCceEEEecCC-----
Confidence 99999 999993 3 1 1 367999999999999999999998776442 11111022346765
Q ss_pred CCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEEEe
Q 036132 342 STRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFS 418 (437)
Q Consensus 342 ~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa 418 (437)
..+|+|+|+|+| .+|+||+++|++.... +..|+ +++.... ..+.||||++|||++|+|||++++|||||
T Consensus 376 -----~~~P~itf~fgg--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA 447 (453)
T 2bju_A 376 -----SKLPTFEFTSEN--GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIA 447 (453)
T ss_dssp -----TTCCCEEEECSS--CEEEECHHHHEEECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEE
T ss_pred -----CCCCcEEEEECC--EEEEECHHHhEeecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEE
Confidence 158999999976 9999999999998753 46898 6766542 13479999999999999999999999999
Q ss_pred ecC
Q 036132 419 SSL 421 (437)
Q Consensus 419 ~~~ 421 (437)
+..
T Consensus 448 ~~~ 450 (453)
T 2bju_A 448 LAK 450 (453)
T ss_dssp EEC
T ss_pred Ecc
Confidence 863
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.6e-50 Score=414.74 Aligned_cols=311 Identities=14% Similarity=0.187 Sum_probs=245.2
Q ss_pred ceEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCC
Q 036132 31 ALLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRP 110 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~ 110 (437)
...+||++ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|.....++++ .++
T Consensus 126 ~~~~pL~n-~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C-----------~s~~C~~~~~ydps------~Ss 187 (451)
T 3qvc_A 126 FDNVELKD-LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKC-----------TSESCESKNHYDSS------KSK 187 (451)
T ss_dssp -CCCCGGG-GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTC-----------CSGGGTTSCCBCGG------GCT
T ss_pred CCccceee-cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CccccCCCCCCCCC------CCc
Confidence 44578886 3578999999999999999999999999999999765 34567655555543 133
Q ss_pred CCCCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEecccc----CccCCCCCCcceEeecCCCC-
Q 036132 111 GCNNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAAT----FLLEGLASGVKGMAGLGRTR- 185 (437)
Q Consensus 111 ~~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~- 185 (437)
++....|.|.+.|+ +++ +.|.+++|+|++++. +++ +.|||++. ... ......+||||||++.
T Consensus 188 T~~~~~~~f~i~Yg-dGs-~~G~~~~Dtv~igg~---------~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~ 254 (451)
T 3qvc_A 188 TYEKDDTPVKLTSK-AGT-ISGIFSKDLVTIGKL---------SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDL 254 (451)
T ss_dssp TCEEEEEEEEEECS-SEE-EEEEEEEEEEEETTE---------EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCS
T ss_pred ccccCCCEEEEEEC-CCE-EEEEEEEEEEEECCE---------EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcc
Confidence 44456789999997 766 999999999999875 788 99999988 422 2224579999999875
Q ss_pred -----CchHhhhhhccCC-CcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCc
Q 036132 186 -----ISLPSQFSAAFSF-DRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSA 259 (437)
Q Consensus 186 -----~s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~ 259 (437)
.+++.+|.+++.| +++||+||.+....+|.|+|||+|+ +++.|++.|+|+.. +.
T Consensus 255 s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~------s~y~G~l~~~pv~~--------------~~ 314 (451)
T 3qvc_A 255 SIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEE------RFFDGPLNYEKLNH--------------DL 314 (451)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG------GGEEEEEEEEECSS--------------TT
T ss_pred cccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcch------hhcCCceEEEEccc--------------CC
Confidence 3578899998888 4789999999755689999999996 57889999999974 47
Q ss_pred ceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCC
Q 036132 260 EYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTF 339 (437)
Q Consensus 260 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 339 (437)
+|.|.++ |+|+++ .. ....+||||||+++++|+++++++.+++..... . ........|. .
T Consensus 315 ~w~v~l~-I~Vgg~-~~-----------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~-~~g~y~v~C~-~-- 374 (451)
T 3qvc_A 315 MWQVDLD-VHFGNV-SS-----------KKANVILDSATSVITVPTEFFNQFVESASVFKV---P-FLSLYVTTCG-N-- 374 (451)
T ss_dssp SSEEEEE-EEETTE-EE-----------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---T-TSSCEEEETT-C--
T ss_pred eeEEEEE-EEECCc-cC-----------CCceEEEeCCCccccCCHHHHHHHHHHcCCeec---C-CCCeEEeeCC-c--
Confidence 8999999 999997 11 136799999999999999999999887754321 1 0111223565 2
Q ss_pred CCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCCCCCCceeechhhccceEEEEeCCCCeEE
Q 036132 340 VGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLG 416 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIG 416 (437)
..+|+|+|+|+| .+++||+++|++...+ +..|+ ++...... .+.||||++|||++|+|||++++|||
T Consensus 375 -------~~~P~itf~fgg--~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIG 444 (451)
T 3qvc_A 375 -------TKLPTLEYRSPN--KVYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVG 444 (451)
T ss_dssp -------TTCCCEEEEETT--EEEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEE
T ss_pred -------CcCCcEEEEECC--EEEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEE
Confidence 368999999987 9999999999998652 46887 56654421 35799999999999999999999999
Q ss_pred EeecCc
Q 036132 417 FSSSLL 422 (437)
Q Consensus 417 fa~~~~ 422 (437)
||+.++
T Consensus 445 fA~ak~ 450 (451)
T 3qvc_A 445 FALAKN 450 (451)
T ss_dssp EEEECC
T ss_pred EEEccc
Confidence 999754
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-49 Score=398.49 Aligned_cols=328 Identities=17% Similarity=0.227 Sum_probs=240.8
Q ss_pred EeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCC
Q 036132 34 LPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCN 113 (437)
Q Consensus 34 ~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~ 113 (437)
-||+++ ....|+++|.||||+|+++|+|||||+++||+|.+|.. |. ..+++. .++++.
T Consensus 5 ~~l~~~-~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~-------------~~--~~f~~~------~SsT~~ 62 (383)
T 2ewy_A 5 DNLQGD-SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSY-------------ID--TYFDTE------RSSTYR 62 (383)
T ss_dssp TCEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTT-------------BS--CCCCGG------GCTTCE
T ss_pred eeccCC-CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCc-------------cc--cCcccc------cCccce
Confidence 356664 45679999999999999999999999999999987621 11 112111 122334
Q ss_pred CCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc-----
Q 036132 114 NDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS----- 187 (437)
Q Consensus 114 ~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s----- 187 (437)
...|.|.+.|+ +++ ++|++++|+|++++.. .+.+ .+.|+|.......+. ....+||||||+...+
T Consensus 63 ~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~i~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~ 133 (383)
T 2ewy_A 63 SKGFDVTVKYT-QGS-WTGFVGEDLVTIPKGF------NTSF-LVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSS 133 (383)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEEETTTE------EEEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred eCCceEEEEEC-CcE-EEEEEEEEEEEECCCc------ccee-EEEEEEEEeecceeeccCcCceEEecCchhccccccc
Confidence 45789999997 765 6999999999997531 0122 356888765421111 1357999999987543
Q ss_pred ---hHhhhhhccCCCcceEEecCC-------CCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCC
Q 036132 188 ---LPSQFSAAFSFDRKFAICLSS-------SSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEP 257 (437)
Q Consensus 188 ---~~~ql~~~~~i~~~FS~~L~~-------~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~ 257 (437)
+..+|.+++.++++||+||.+ ....+|.|+|||+|+ +++.|++.|+|++.
T Consensus 134 ~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~-------------- 193 (383)
T 2ewy_A 134 LETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEP------SLYKGDIWYTPIKE-------------- 193 (383)
T ss_dssp SCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCG------GGCCSCEEEEECSS--------------
T ss_pred ccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccch------hhccCccEEEecCC--------------
Confidence 556788777777789999864 124689999999996 56889999999975
Q ss_pred CcceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCC---CCCCCcc
Q 036132 258 SAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTP---VAPFGAC 334 (437)
Q Consensus 258 ~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C 334 (437)
..+|.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+... .++... ......|
T Consensus 194 ~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~C 267 (383)
T 2ewy_A 194 EWYYQIEILKLEIGGQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-IPEFSDGFWTGSQLAC 267 (383)
T ss_dssp BTTBBCCEEEEEETTEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC-SSCCCHHHHHTSEEEE
T ss_pred CceEEEEEEEEEECCEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc-cccCcccccccccccc
Confidence 36899999999999998876543321 36799999999999999999999999988643 111111 0124579
Q ss_pred cccCCCCCCCCCCCcCeEEEEEecC----ceEEEEcCCCeEEEeC---CCeEEEEE--EeCCCCCCCceeechhhccceE
Q 036132 335 FNSTFVGSTRVGPAVPQIDLVLQSN----TVIWRIFGANSMVQVR---DDVLCLGF--VDGGVNPRTSIVIGGHQLEDNL 405 (437)
Q Consensus 335 ~~~~~~~~~~~~~~~P~l~f~f~g~----~~~~~v~~~~y~~~~~---~~~~C~~~--~~~~~~~~~~~ILG~~flr~~y 405 (437)
+..... .+..+|.|+|+|+++ .++|+||+++|+.... .+..|+++ ... ...||||+.|||++|
T Consensus 268 ~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~y 339 (383)
T 2ewy_A 268 WTNSET----PWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATVMEGFY 339 (383)
T ss_dssp ECSSSC----GGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHHHTTEE
T ss_pred ccCCcc----cHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHHhCCee
Confidence 865422 124689999999983 2589999999998764 35689864 322 236999999999999
Q ss_pred EEEeCCCCeEEEeecCccccccCCCcc
Q 036132 406 LQFDLATSRLGFSSSLLFHQTTCANFN 432 (437)
Q Consensus 406 vvFD~e~~rIGfa~~~~~~~~~c~~~~ 432 (437)
+|||++++|||||+. +|...+
T Consensus 340 vvfD~~~~rIGfA~~------~c~~~~ 360 (383)
T 2ewy_A 340 VIFDRAQKRVGFAAS------PCAEIA 360 (383)
T ss_dssp EEEETTTTEEEEEEC------TTCBSS
T ss_pred EEEECCCCeEEEEec------cCCCcC
Confidence 999999999999984 786543
No 29
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.2e-49 Score=393.03 Aligned_cols=299 Identities=17% Similarity=0.150 Sum_probs=230.1
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCCCCCCeee
Q 036132 41 STLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCNNDTCAHL 120 (437)
Q Consensus 41 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 120 (437)
.+.+|+++|.|| ||+++|+|||||+++||+|.+|. +..|.....++++ ++++..+.|.|.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~-------~Ss~~~~~~~~~ 72 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-----------SSERSGHDYYTPG-------SSAQKIDGATWS 72 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-----------HHHHTTCCCBCCC-------TTCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-----------cccccCCCCCCcc-------ccCCccCCCeEE
Confidence 678999999999 79999999999999999998762 2234444444332 111233578999
Q ss_pred eecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCCc---------hHh
Q 036132 121 PDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRIS---------LPS 190 (437)
Q Consensus 121 ~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ 190 (437)
+.|+ +|+.++|.+++|+|++++. +++++.|||++....... ....+||||||+...+ +..
T Consensus 73 i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 142 (323)
T 1izd_A 73 ISYG-DGSSASGDVYKDKVTVGGV---------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFD 142 (323)
T ss_dssp EECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred EEcC-CCCeEEEEEEEEEEEECCE---------EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHH
Confidence 9997 8888999999999999864 788999999998632211 1457999999987543 556
Q ss_pred hhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEeEeeEEE
Q 036132 191 QFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIGVKSIKI 270 (437)
Q Consensus 191 ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v 270 (437)
+|.++ .-+++||+||.+. .+|.|+|||+|+ +++.|++.|+|++.. ..+|.|.+++|+|
T Consensus 143 ~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~~w~v~l~~i~v 200 (323)
T 1izd_A 143 NVKSS-LSEPIFAVALKHN--APGVYDFGYTDS------SKYTGSITYTDVDNS-------------QGFWGFTADGYSI 200 (323)
T ss_dssp HHGGG-SSSSEEEEECCTT--SCEEEEESSCCT------TSEEEEEEEEECBCT-------------TSSCEEEESEEEE
T ss_pred HHHHh-ccCcEEEEEccCC--CCCEEEECCcCc------cccccceEEEECCCC-------------CceEEEEECeEEE
Confidence 77665 2257899999874 589999999996 567899999999743 4689999999999
Q ss_pred cCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCCCCCCCcC
Q 036132 271 NGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGSTRVGPAVP 350 (437)
Q Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 350 (437)
++ .+.. ....+||||||++++||+++|++|.+++.... +... .......|+ ..+|
T Consensus 201 ~~-~~~~----------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~--~~~~-~g~~~~~C~-----------~~~P 255 (323)
T 1izd_A 201 GS-DSSS----------DSITGIADTGTTLLLLDDSIVDAYYEQVNGAS--YDSS-QGGYVFPSS-----------ASLP 255 (323)
T ss_dssp TT-EEEC----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETT-TTEEEEETT-----------CCCC
T ss_pred CC-cccC----------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcE--EcCc-CCEEEEECC-----------CCCc
Confidence 99 4421 13579999999999999999999988764221 1110 111123566 2489
Q ss_pred eEEEEEecCceEEEEcCCCeEEEeCCCeEEEE-EEeCCCCCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 351 QIDLVLQSNTVIWRIFGANSMVQVRDDVLCLG-FVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 351 ~l~f~f~g~~~~~~v~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
+|+|+|+| .+|+||+++|++...++..|+. +..... .+.||||+.|||++|+|||++++|||||+.
T Consensus 256 ~i~f~fgg--~~~~i~~~~~~~~~~~~~~C~~~i~~~~~--~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 256 DFSVTIGD--YTATVPGEYISFADVGNGQTFGGIQSNSG--IGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp CEEEEETT--EEEEECHHHHEEEECSTTEEEESEEECTT--TSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred eEEEEECC--EEEecCHHHeEEecCCCCeEEEEEEcCCC--CCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 99999965 9999999999987655679986 665432 357999999999999999999999999984
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.3e-49 Score=398.82 Aligned_cols=329 Identities=19% Similarity=0.243 Sum_probs=243.2
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
+..+|+.+ ...+|+++|.||||+|+++|+|||||+++||+|.+|.. |. ..+++. .+++
T Consensus 11 ~~~~l~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~-------------~~--~~y~~~------~SsT 68 (395)
T 2qp8_A 11 MVDNLRGK-SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF-------------LH--RYYQRQ------LSST 68 (395)
T ss_dssp TTTCEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT-------------CS--CCCCGG------GCTT
T ss_pred eeeecCCC-CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc-------------cc--CCcCcc------cCCC
Confidence 34456553 46689999999999999999999999999999987731 11 112221 1223
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeee-cCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCC---
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQS-TDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRI--- 186 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~-~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~--- 186 (437)
+....|.|.+.|+ +++ ++|++++|+|++++ .. +.+ .+.|++.......+. ....+||||||+...
T Consensus 69 ~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~g~~-------~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~ 138 (395)
T 2qp8_A 69 YRDLRKGVYVPYT-QGK-WEGELGTDLVSIPHGPN-------VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARP 138 (395)
T ss_dssp CEEEEEEEEEECS-SCE-EEEEEEEEEEECTTSCS-------CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSS
T ss_pred ceeCCceEEEEEC-CcE-EEEEEEeEEEEECCCCC-------ceE-EEEEEEEEccCcccccccCccceEEcCchhhccC
Confidence 3445789999997 765 59999999999973 21 122 256777664321111 246799999998654
Q ss_pred -----chHhhhhhccCCCcceEEecCCC----------CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCc
Q 036132 187 -----SLPSQFSAAFSFDRKFAICLSSS----------SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGA 251 (437)
Q Consensus 187 -----s~~~ql~~~~~i~~~FS~~L~~~----------~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~ 251 (437)
+++.+|.+++.++++||+||.+. ...+|.|+|||+|+ +++.|++.|+|++.
T Consensus 139 ~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~-------- 204 (395)
T 2qp8_A 139 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH------SLYTGSLWYTPIRR-------- 204 (395)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG------GGEEEEEEEEECCS--------
T ss_pred CCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCc------ccccCceEEeccCC--------
Confidence 45668888888878999999752 13589999999986 56789999999975
Q ss_pred ccCCCCCcceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCC---C
Q 036132 252 FFEGEPSAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTP---V 328 (437)
Q Consensus 252 ~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~ 328 (437)
..+|.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++..... .++... .
T Consensus 205 ------~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~ 272 (395)
T 2qp8_A 205 ------EWYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWL 272 (395)
T ss_dssp ------BTTBBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHT
T ss_pred ------CceEEEEEEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc-cccCCccccc
Confidence 36899999999999998876543332 35799999999999999999999999988753 111110 1
Q ss_pred CCCCcccccCCCCCCCCCCCcCeEEEEEecCc----eEEEEcCCCeEEEeCC----CeEEEE--EEeCCCCCCCceeech
Q 036132 329 APFGACFNSTFVGSTRVGPAVPQIDLVLQSNT----VIWRIFGANSMVQVRD----DVLCLG--FVDGGVNPRTSIVIGG 398 (437)
Q Consensus 329 ~~~~~C~~~~~~~~~~~~~~~P~l~f~f~g~~----~~~~v~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~ILG~ 398 (437)
.....|+..... .+..+|.|+|+|+|+. ++|+|+|++|+....+ ...|++ +... ...||||+
T Consensus 273 ~~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~ 344 (395)
T 2qp8_A 273 GEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGA 344 (395)
T ss_dssp TCSCEEESTTCC----CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECH
T ss_pred cccccccccccc----hHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEECh
Confidence 123579875432 1246999999999831 4799999999987643 358974 4432 24699999
Q ss_pred hhccceEEEEeCCCCeEEEeecCccccccCCCcc
Q 036132 399 HQLEDNLLQFDLATSRLGFSSSLLFHQTTCANFN 432 (437)
Q Consensus 399 ~flr~~yvvFD~e~~rIGfa~~~~~~~~~c~~~~ 432 (437)
.|||++|+|||++++|||||+. +|...+
T Consensus 345 ~fl~~~yvvfD~~~~rIGfA~~------~c~~~~ 372 (395)
T 2qp8_A 345 VIMEGFYVVFDRARKRIGFAVS------ACHVHD 372 (395)
T ss_dssp HHHTTEEEEEETTTTEEEEEEE------TTCCCC
T ss_pred HHhCCeeEEEECCCCEEEEEec------cCCCCC
Confidence 9999999999999999999984 887654
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.6e-49 Score=390.63 Aligned_cols=305 Identities=16% Similarity=0.143 Sum_probs=231.5
Q ss_pred EeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCC
Q 036132 34 LPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCN 113 (437)
Q Consensus 34 ~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~ 113 (437)
+++.....+.+|+++|.|| +|+++|+|||||+++||+|.+|. +..|.....+++++ ++ +.
T Consensus 6 v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~~------Ss-~~ 65 (323)
T 1bxo_A 6 ATNTPTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-----------ASQQSGHSVYNPSA------TG-KE 65 (323)
T ss_dssp EEEEECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-----------HHHHTTSCCBCHHH------HC-EE
T ss_pred eeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-----------chhccCCCCCCccc------CC-cc
Confidence 4444434688999999999 89999999999999999998762 22344444444321 11 12
Q ss_pred CCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCCC-CCcceEeecCCCCC------
Q 036132 114 NDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGLA-SGVKGMAGLGRTRI------ 186 (437)
Q Consensus 114 ~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~~-~~~~GIlGLg~~~~------ 186 (437)
.+.|.|.++|+ +|+.++|.+++|+|++++. ++++++|||++........ ...+||||||+...
T Consensus 66 ~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 135 (323)
T 1bxo_A 66 LSGYTWSISYG-DGSSASGNVFTDSVTVGGV---------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQ 135 (323)
T ss_dssp EEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSS
T ss_pred cCCCeEEEEeC-CCCeEEEEEEEEEEEECCE---------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccC
Confidence 35689999997 8888999999999999865 7889999999976322211 46799999998654
Q ss_pred ---chHhhhhhccCCCcceEEecCCCCCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEE
Q 036132 187 ---SLPSQFSAAFSFDRKFAICLSSSSRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFI 263 (437)
Q Consensus 187 ---s~~~ql~~~~~i~~~FS~~L~~~~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v 263 (437)
++..+|.++ .-+++||+||.+. .+|.|+|||+|+ +++.|++.|+|++.. ..+|.|
T Consensus 136 ~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~------~~~~g~l~~~p~~~~-------------~~~w~v 193 (323)
T 1bxo_A 136 SQTTFFDTVKSS-LAQPLFAVALKHQ--QPGVYDFGFIDS------SKYTGSLTYTGVDNS-------------QGFWSF 193 (323)
T ss_dssp CCCCHHHHHGGG-BSSSEEEEECCSS--SCEEEEESSCCG------GGBSSCCEEEECBCT-------------TSSCEE
T ss_pred CCCCHHHHHHHh-cCCcEEEEEEeCC--CCceEEEeCcCh------hhccCceEEEECCCC-------------CCeEEE
Confidence 356677665 2247899999873 589999999996 578899999999753 468999
Q ss_pred eEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCC
Q 036132 264 GVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGST 343 (437)
Q Consensus 264 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 343 (437)
.+++|+|++ ... ....+||||||++++||+++|++|.+++.... +... .......|+.
T Consensus 194 ~l~~i~v~~-~~~-----------~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~--~~~~-~g~~~~~C~~------- 251 (323)
T 1bxo_A 194 NVDSYTAGS-QSG-----------DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ--QDSN-AGGYVFDCST------- 251 (323)
T ss_dssp EEEEEEETT-EEE-----------EEEEEEECTTCSSEEECHHHHHHHHTTSTTCE--EETT-TTEEEECTTC-------
T ss_pred EEeeEEECC-ccC-----------CCceEEEeCCCCceeCCHHHHHHHHHhCCCce--EcCc-CCEEEEECCC-------
Confidence 999999999 211 13579999999999999999999988764321 1111 1111235762
Q ss_pred CCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC-CeEEEE-EEeCCCCCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 344 RVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD-DVLCLG-FVDGGVNPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 344 ~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
.+|+|+|+|+| .+++||+++|++...+ +..|+. +..... .+.||||+.|||++|+|||++|+|||||+.
T Consensus 252 ----~~P~i~f~fgg--~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 252 ----NLPDFSVSISG--YTATVPGSLINYGPSGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp ----CCCCEEEEETT--EEEEECHHHHEEEECSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ----CCceEEEEECC--EEEEECHHHeEEeccCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 47999999966 9999999999887643 368986 555432 357999999999999999999999999984
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.5e-48 Score=393.73 Aligned_cols=324 Identities=19% Similarity=0.229 Sum_probs=240.1
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCCCCCCeeee
Q 036132 42 TLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCNNDTCAHLP 121 (437)
Q Consensus 42 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 121 (437)
...|+++|.||||||+++|+|||||+++||+|.+|+. ....+.+. .++++....|.|.+
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~---------------~~~~y~~~------~SsT~~~~~~~~~i 85 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF---------------LHRYYQRQ------LSSTYRDLRKGVYV 85 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT---------------CSCCCCGG------GCTTCEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCCc---------------ccCCcCcc------cCcccccCCCEEEE
Confidence 4689999999999999999999999999999987621 11122221 12233445789999
Q ss_pred ecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCC--------CchHhhh
Q 036132 122 DNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTR--------ISLPSQF 192 (437)
Q Consensus 122 ~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~--------~s~~~ql 192 (437)
.|+ +++ +.|.+++|+|++++.. .+.. .+.|+++........ ....+||||||+.. .+++.+|
T Consensus 86 ~Yg-~Gs-~~G~~~~D~v~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 86 PYT-QGK-WEGELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp ECS-SCE-EEEEEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEC-cEE-EEEEEEEEEEEECCcc------ccce-eeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 997 765 6999999999997421 0122 245777765422221 24679999999864 3567789
Q ss_pred hhccCCCcceEEecCCC----------CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceE
Q 036132 193 SAAFSFDRKFAICLSSS----------SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYF 262 (437)
Q Consensus 193 ~~~~~i~~~FS~~L~~~----------~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~ 262 (437)
.+++.++++||+||.+. ...+|.|+|||+|+ +++.|++.|+|++. ..+|.
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~w~ 216 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH------SLYTGSLWYTPIRR--------------EWYYE 216 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCG------GGEEEEEEEEECSS--------------BTTBE
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCc------ccccCceEEEeCCc--------------CcEEE
Confidence 99888877999999742 24589999999996 57889999999975 46899
Q ss_pred EeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCC---CCCCCcccccCC
Q 036132 263 IGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTP---VAPFGACFNSTF 339 (437)
Q Consensus 263 v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~ 339 (437)
|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++..... ..+... ......|+....
T Consensus 217 v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~ 290 (402)
T 3vf3_A 217 VIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGT 290 (402)
T ss_dssp ECEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCTTGGGTCSCEEEETTC
T ss_pred EEEeEEEECCEEecccccccC-----CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc-ccccCcccccccccccccccc
Confidence 999999999999876543321 36899999999999999999999999998753 111111 122468987643
Q ss_pred CCCCCCCCCcCeEEEEEecC----ceEEEEcCCCeEEEeCCC----eEEEEEEeCCCCCCCceeechhhccceEEEEeCC
Q 036132 340 VGSTRVGPAVPQIDLVLQSN----TVIWRIFGANSMVQVRDD----VLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLA 411 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~----~~~~~v~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e 411 (437)
.. +..+|+|+|+|++. .++++|++++|++...+. ..|+++.... ....||||+.|||++|+|||++
T Consensus 291 ~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~--~~~~~ILG~~fl~~~yvvfD~~ 364 (402)
T 3vf3_A 291 TP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRA 364 (402)
T ss_dssp CC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE--ESSCEEECHHHHTTEEEEEEGG
T ss_pred ch----HhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECC
Confidence 21 24699999999983 246999999999976542 5898642211 1246999999999999999999
Q ss_pred CCeEEEeecCccccccCCCccC
Q 036132 412 TSRLGFSSSLLFHQTTCANFNF 433 (437)
Q Consensus 412 ~~rIGfa~~~~~~~~~c~~~~~ 433 (437)
++|||||+ .+|...+.
T Consensus 365 ~~rIGfA~------~~c~~~~~ 380 (402)
T 3vf3_A 365 RKRIGFAV------SACHVHDE 380 (402)
T ss_dssp GTEEEEEE------ETTCCBCS
T ss_pred CCEEEEEe------cccCcccC
Confidence 99999998 48886643
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4.5e-48 Score=398.91 Aligned_cols=323 Identities=19% Similarity=0.237 Sum_probs=243.3
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCCCCCCCeeee
Q 036132 42 TLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGCNNDTCAHLP 121 (437)
Q Consensus 42 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 121 (437)
...|+++|.||||+|+++|+|||||+++||+|.+|+ .....|++. .++++....|.|.+
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~cc---------------~~~~~y~~~------~SsT~~~~~~~~~i 131 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---------------FLHRYYQRQ------LSSTYRDLRKGVYV 131 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---------------TCSCCCCGG------GCTTCEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEeccccc---------------ccCCcccCC------CCCCcccCCccEEE
Confidence 347999999999999999999999999999998662 111222221 12233445789999
Q ss_pred ecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccCCC-CCCcceEeecCCCCC--------chHhhh
Q 036132 122 DNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRI--------SLPSQF 192 (437)
Q Consensus 122 ~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql 192 (437)
.|+ +++ +.|++++|+|+|++.. .+.+ .+.|+|+......+. ....+||||||+... +++.+|
T Consensus 132 ~Yg-~Gs-~~G~~~~Dtv~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 132 PYT-QGK-WEGELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp ECS-SCE-EEEEEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EeC-CeE-EEEEEEEEEEEECCCc------ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 997 765 5999999999997421 0123 356888776532221 246799999998643 467789
Q ss_pred hhccCCCcceEEecCCC----------CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceE
Q 036132 193 SAAFSFDRKFAICLSSS----------SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYF 262 (437)
Q Consensus 193 ~~~~~i~~~FS~~L~~~----------~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~ 262 (437)
.+++.++++||+||.+. ...+|.|+|||+|+ ++|.|++.|+|+.. ..+|.
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~w~ 262 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH------SLYTGSLWYTPIRR--------------EWYYE 262 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG------GGEEEEEEEEECCS--------------BTTBB
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCc------ccccCceEEEecCC--------------CceeE
Confidence 88888877999999753 24589999999996 57889999999975 46899
Q ss_pred EeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHHHHhhcCCCCCC---CCCCCcccccCC
Q 036132 263 IGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFVKEVANIPRVTP---VAPFGACFNSTF 339 (437)
Q Consensus 263 v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~ 339 (437)
|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++..... ..+... ......|+....
T Consensus 263 v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~g~~~~C~~~~~ 336 (455)
T 3lpj_A 263 VIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGT 336 (455)
T ss_dssp CCEEEEEETTEECCCCGGGGG-----SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTC
T ss_pred EEEeEEEECCEEccccccccC-----CCeEEEECCCcceeCCHHHHHHHHHHhhhhcc-ccccCcccccCcceecccccC
Confidence 999999999998876543321 36899999999999999999999999998753 111111 122468987643
Q ss_pred CCCCCCCCCcCeEEEEEecC----ceEEEEcCCCeEEEeCCC----eEEEEEEeCCCCCCCceeechhhccceEEEEeCC
Q 036132 340 VGSTRVGPAVPQIDLVLQSN----TVIWRIFGANSMVQVRDD----VLCLGFVDGGVNPRTSIVIGGHQLEDNLLQFDLA 411 (437)
Q Consensus 340 ~~~~~~~~~~P~l~f~f~g~----~~~~~v~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e 411 (437)
.. +..+|+|+|+|++. .++|+|++++|++...+. ..|+++.... ..+.||||+.|||++|+|||++
T Consensus 337 ~~----~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~--~~~~~ILG~~fl~~~yvvfD~~ 410 (455)
T 3lpj_A 337 TP----WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ--SSTGTVMGAVIMEGFYVVFDRA 410 (455)
T ss_dssp CC----GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE--ESSCEEECHHHHTTEEEEEETT
T ss_pred Cc----hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC--CCCcEEEChHHhCCeEEEEECC
Confidence 21 24699999999983 136999999999987542 5898743221 1246999999999999999999
Q ss_pred CCeEEEeecCccccccCCCcc
Q 036132 412 TSRLGFSSSLLFHQTTCANFN 432 (437)
Q Consensus 412 ~~rIGfa~~~~~~~~~c~~~~ 432 (437)
++|||||+ .+|...+
T Consensus 411 ~~rIGfA~------~~c~~~~ 425 (455)
T 3lpj_A 411 RKRIGFAV------SACHVHD 425 (455)
T ss_dssp TTEEEEEE------ETTCCCC
T ss_pred CCEEEEEe------ccccccc
Confidence 99999998 4887665
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-38 Score=300.57 Aligned_cols=228 Identities=18% Similarity=0.195 Sum_probs=181.5
Q ss_pred EEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCCC
Q 036132 33 LLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPGC 112 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~~ 112 (437)
.+||++ ..+.+|+++|.||||+|+++|+|||||+++||+|..|.. ...|.....+++. .++++
T Consensus 4 ~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~----------~~~C~~~~~y~~~------~SsT~ 66 (239)
T 1b5f_A 4 VVALTN-DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCIN----------SKACRAHSMYESS------DSSTY 66 (239)
T ss_dssp EEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS----------CHHHHTSCCBCGG------GCTTC
T ss_pred eeeeee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCC----------CcccCCCCCCCCc------cCCCe
Confidence 588987 467899999999999999999999999999999987631 2346544444433 13344
Q ss_pred CCCCCeeeeecCCCCceeeeeEEEEEEEeeecCCCCccceeeeCceEEeccccCccC-CCCCCcceEeecCCCCCc--hH
Q 036132 113 NNDTCAHLPDNTITNTGTSGELSTDIVSIQSTDGKNLGRVVSVPNLAFACAATFLLE-GLASGVKGMAGLGRTRIS--LP 189 (437)
Q Consensus 113 ~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~~~g~~~~~~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s--~~ 189 (437)
....|.|.+.|+ +++ ++|.+++|+|++++. .++++.|||+...... +.....+||||||+...+ +.
T Consensus 67 ~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 67 KENGTFGAIIYG-TGS-ITGFFSQDSVTIGDL---------VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp EEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred eeCCcEEEEEEC-CCc-EEEEEEEEEEEECCc---------EEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 456789999997 765 899999999999864 7889999999875321 223467999999998876 44
Q ss_pred hhhhhccCC-CcceEEecCCC--CCCceeEEEcCCCCCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEeEe
Q 036132 190 SQFSAAFSF-DRKFAICLSSS--SRVNGVVFFGDGPYFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIGVK 266 (437)
Q Consensus 190 ~ql~~~~~i-~~~FS~~L~~~--~~~~G~i~fGg~d~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~ 266 (437)
.+|.+++.+ +++||+||.+. ....|.|+|||+|+ +++.|++.|+|++. ..+|.|.++
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~------~~~~g~l~~~p~~~--------------~~~~~v~l~ 195 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDP------NHFRGDHTYVPVTY--------------QYYWQFGIG 195 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCG------GGEEEEEEEEEEEE--------------ETTEEEEEC
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcCh------hhccCceEEEEccc--------------CCeEEEEee
Confidence 567777767 47899999885 24589999999986 56789999999975 368999999
Q ss_pred eEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHHHHHHHHHH
Q 036132 267 SIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIYNALARAFV 316 (437)
Q Consensus 267 ~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~~~l~~~l~ 316 (437)
+|+|+++.+.+... ...+||||||++++||+++|++|.+++.
T Consensus 196 ~i~v~~~~~~~~~~--------~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 196 DVLIGDKSTGFCAP--------GCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CEEETTEECCTTTT--------CEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEEECCEEecccCC--------CCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 99999988764321 3579999999999999999999988764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.2e-35 Score=278.95 Aligned_cols=223 Identities=17% Similarity=0.227 Sum_probs=175.3
Q ss_pred eeeCceEEeccccCccCCC-CCCcceEeecCCCCC------chHhhhhhccCC-CcceEEecCCCCCC--ceeEEEcCCC
Q 036132 153 VSVPNLAFACAATFLLEGL-ASGVKGMAGLGRTRI------SLPSQFSAAFSF-DRKFAICLSSSSRV--NGVVFFGDGP 222 (437)
Q Consensus 153 ~~~~~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~--~G~i~fGg~d 222 (437)
+++++++|||++...+..+ ....+||||||++.. ++..+|.+++.+ +++||+||.+.... +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 4788999999998743222 346899999998764 366788888877 47899999986333 8999999999
Q ss_pred CCCCCCCcCCCCceeeeeCccCCCCCCCcccCCCCCcceEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCccee
Q 036132 223 YFFLPRDIDFSKSLFYTPLILNPVSTAGAFFEGEPSAEYFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTV 302 (437)
Q Consensus 223 ~~~~p~~~~~~g~i~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~ 302 (437)
+ +++.|++.|+|+.. ..+|.|.+++|+|+++.+... ....+||||||++++
T Consensus 83 ~------~~~~g~l~~~p~~~--------------~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~ 133 (241)
T 1lya_B 83 S------KYYKGSLSYLNVTR--------------KAYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMV 133 (241)
T ss_dssp G------GGEEEEEEEEECSS--------------BTTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEE
T ss_pred H------HHcCCceEEEECcc--------------ccEEEEEEeEEEECCeeEecc---------CCCEEEEECCCcccc
Confidence 6 57889999999974 468999999999999764211 136799999999999
Q ss_pred ecHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccCCCCCCCCCCCcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEE
Q 036132 303 LHTSIYNALARAFVKEVANIPRVTPVAPFGACFNSTFVGSTRVGPAVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLC 380 (437)
Q Consensus 303 lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C 380 (437)
+|+++|+++.+++.+... ........|+.. ..+|+|+|+|+| .+++||+++|++.... +..|
T Consensus 134 lP~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~---------~~~p~i~f~f~g--~~~~l~~~~y~~~~~~~~~~~C 197 (241)
T 1lya_B 134 GPVDEVRELQKAIGAVPL-----IQGEYMIPCEKV---------STLPAITLKLGG--KGYKLSPEDYTLKVSQAGKTLC 197 (241)
T ss_dssp ECHHHHHHHHHHHTCEEE-----ETTEEEEEGGGG---------GGSCCEEEEETT--EEEEECTTTSEEEETTTTSSEE
T ss_pred CCHHHHHHHHHHhCCeec-----cCCcEEEECCCC---------ccCCeEEEEECC--EEEEECHHHhEEEccCCCCCee
Confidence 999999999988754321 111223468754 358999999976 9999999999998753 4689
Q ss_pred E-EEEeCCCC--CCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 381 L-GFVDGGVN--PRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 381 ~-~~~~~~~~--~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
+ ++...... ..+.||||++|||++|+|||++++|||||+.
T Consensus 198 ~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 198 LSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp EESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEc
Confidence 8 47764311 2357999999999999999999999999985
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.76 E-value=1.3e-18 Score=140.24 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=72.9
Q ss_pred eEEeEeeCCCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCcccccCCCccccccccCCccccCCCCCCCC
Q 036132 32 LLLPVTKDASTLQYVTQINQRTPLVPVKVTLDLGGQFLWVDCDQGYVSSSYKPVRCRSAQCNLARSKSCVQSCFSPPRPG 111 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~Sst~~~~~c~~~~c~~~~~~~c~~~~~~~~~~~ 111 (437)
..+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|... ...|.....++.. .+++
T Consensus 3 ~~~~l~n-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~---------~~~C~~~~~y~p~------~SsT 66 (97)
T 1lya_A 3 IPEVLKN-YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLL---------DIACWIHHKYNSD------KSST 66 (97)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTT---------CHHHHTSCCBCGG------GCTT
T ss_pred ceEeeEE-CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCc---------ccccCCCCCCCch------hCCC
Confidence 4689986 3688999999999999999999999999999999876310 1356544444432 1334
Q ss_pred CCCCCCeeeeecCCCCceeeeeEEEEEEEeee
Q 036132 112 CNNDTCAHLPDNTITNTGTSGELSTDIVSIQS 143 (437)
Q Consensus 112 ~~~~~~~~~~~Y~~d~~~~~G~~~~D~~~~~~ 143 (437)
+....|.|.+.|+ +++ +.|.+++|+|+|++
T Consensus 67 ~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 67 YVKNGTSFDIHYG-SGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp CEEEEEEEEEECS-SCE-EEEEEEEEEEEESC
T ss_pred ceeCCCcEEEEEC-CcE-EEEEEEEEEEEECC
Confidence 4556799999997 776 89999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.51 E-value=1.9e-14 Score=113.46 Aligned_cols=71 Identities=14% Similarity=0.316 Sum_probs=59.2
Q ss_pred CcCeEEEEEecCceEEEEcCCCeEEEeCC--CeEEE-EEEeCCC-CCCCceeechhhccceEEEEeCCCCeEEEeec
Q 036132 348 AVPQIDLVLQSNTVIWRIFGANSMVQVRD--DVLCL-GFVDGGV-NPRTSIVIGGHQLEDNLLQFDLATSRLGFSSS 420 (437)
Q Consensus 348 ~~P~l~f~f~g~~~~~~v~~~~y~~~~~~--~~~C~-~~~~~~~-~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 420 (437)
.+|+|+|+|+| .+++|+|++|++.... +..|+ +++.... ...+.||||++|||++|+|||++|+|||||+.
T Consensus 12 ~~P~i~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 12 SMPNVSFTIGG--KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp GCCCEEEEETT--EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEECC--EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEc
Confidence 58999999977 9999999999988653 36898 5665431 12357999999999999999999999999985
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=90.52 E-value=0.45 Score=39.98 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=26.4
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 41 STLQYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 41 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
....+++++.|+. +++++++|||++.+.+.
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccC
Confidence 4567899999987 89999999999988886
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=90.11 E-value=1.4 Score=36.92 Aligned_cols=25 Identities=28% Similarity=0.392 Sum_probs=23.9
Q ss_pred eeechhhccceEEEEeCCCCeEEEe
Q 036132 394 IVIGGHQLEDNLLQFDLATSRLGFS 418 (437)
Q Consensus 394 ~ILG~~flr~~yvvFD~e~~rIGfa 418 (437)
.|||..||+++-++.|.++++|-|.
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEET
T ss_pred eEecHHHHhhCCEEEECCCCEEEEc
Confidence 6999999999999999999999986
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=82.61 E-value=6.8 Score=32.88 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=24.8
Q ss_pred ceeechhhccceEEEEeCCCCeEEEee
Q 036132 393 SIVIGGHQLEDNLLQFDLATSRLGFSS 419 (437)
Q Consensus 393 ~~ILG~~flr~~yvvFD~e~~rIGfa~ 419 (437)
..|||..||+.+-.+.|+++++|-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 369999999999999999999999874
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=77.51 E-value=2 Score=33.91 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=24.0
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 44 QYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 44 ~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
.-++.|.||. |.++.++|||++++.+.
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 4467899998 99999999999999986
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=76.73 E-value=2.2 Score=33.36 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=24.0
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeeeC
Q 036132 45 YVTQINQRTPLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 45 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 73 (437)
-++.|.||. |.++.++|||.+++.+.-
T Consensus 9 P~vtvkI~G--q~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIGG--QLKEALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSEEESC
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEec
Confidence 467899998 999999999999999863
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=69.43 E-value=4.1 Score=31.80 Aligned_cols=26 Identities=31% Similarity=0.238 Sum_probs=23.4
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 45 YVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 45 y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
-++.|.||. |.++.++|||.+++-+.
T Consensus 9 P~vti~I~G--q~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 9 PVVTAYIEG--QPVEVLLDTGADDSIVA 34 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEES
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEc
Confidence 467899998 99999999999999985
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=66.16 E-value=5.1 Score=32.06 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=23.7
Q ss_pred EEEEEEec---CCCceEEEEEEcCCCceeee
Q 036132 45 YVTQINQR---TPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 45 y~~~i~iG---tP~q~~~v~~DTGS~~~wv~ 72 (437)
-.+.|.|| +|+|.+..++|||.+++.+.
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~ 41 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIP 41 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEE
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEe
Confidence 35667776 77899999999999999987
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=63.83 E-value=5.7 Score=31.98 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=22.8
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 44 QYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 44 ~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
.-++ |.||. |.++.++|||.+++.+.
T Consensus 14 rP~v-ikI~G--q~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 14 PEIL-IFVNG--YPIKFLLDTGADITVLN 39 (116)
T ss_dssp CEEE-EEETT--EEEEEEECTTCSSCEEE
T ss_pred CCEE-EEECC--EEEEEEecCCCCcEEEc
Confidence 4456 99998 99999999999999886
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.03 E-value=6 Score=33.22 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=26.3
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 41 STLQYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 41 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
....+++++.|.. +++++++|||++.+.+.
T Consensus 21 ~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 21 QVTMLYINCKVNG--HPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp -CCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccCEEEEEEEECC--EEEEEEEeCCCCcEeeC
Confidence 3567899999987 89999999999999886
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=56.28 E-value=10 Score=30.32 Aligned_cols=26 Identities=4% Similarity=-0.052 Sum_probs=23.3
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 45 YVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 45 y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
-.+.+.||. |.++.++|||.+++-+.
T Consensus 10 P~vti~I~G--q~~eaLLDTGADdTVi~ 35 (114)
T 3sqf_A 10 PSLTLWLDD--KMFTGLINTGADVTIIK 35 (114)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CeEEEEECC--EEEEEEEccCCCceEEe
Confidence 467799998 99999999999999986
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=43.80 E-value=19 Score=29.50 Aligned_cols=30 Identities=17% Similarity=0.133 Sum_probs=25.8
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeeeC
Q 036132 42 TLQYVTQINQRTPLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 42 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 73 (437)
...-++.+.|+. |.+..++|||.+++.+.-
T Consensus 20 ~~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 20 PPEPRITLKVGG--QPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CCSSEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cCCCEEEEEECC--EEEEEEEeCCCCeEEEcc
Confidence 445678899998 999999999999999863
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.93 E-value=22 Score=31.43 Aligned_cols=27 Identities=15% Similarity=0.099 Sum_probs=23.9
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 44 QYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 44 ~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
.-.+.|.||. |.++.++|||.+++.+.
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEe
Confidence 3478899999 99999999999999885
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.41 E-value=22 Score=28.84 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=17.9
Q ss_pred ecCCCceEEEEEEcCCCceeeeC
Q 036132 51 QRTPLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 51 iGtP~q~~~v~~DTGS~~~wv~~ 73 (437)
||. |.++.++|||.+++.+.-
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISE 47 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEET
T ss_pred CCC--EEEEEEecCCCCcEEEec
Confidence 655 778999999999999974
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=37.26 E-value=31 Score=32.53 Aligned_cols=40 Identities=18% Similarity=0.098 Sum_probs=29.2
Q ss_pred eEEeEeeCCCCccEEEE---EEecCC---CceEEEEEEcCCCceeeeC
Q 036132 32 LLLPVTKDASTLQYVTQ---INQRTP---LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~ 73 (437)
..+|+.. ....|.++ |.||.- .+...+++|||++++++|-
T Consensus 184 ~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~ 229 (329)
T 3c9x_A 184 AYTPVDN--SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDD 229 (329)
T ss_dssp EEEECBC--TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECH
T ss_pred EEEEccC--CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCH
Confidence 4566653 34567776 678762 4578999999999999984
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=37.06 E-value=40 Score=30.17 Aligned_cols=38 Identities=16% Similarity=0.069 Sum_probs=26.9
Q ss_pred EEeEeeCCCCccEEEE---EEecCC-----CceEEEEEEcCCCceeeeC
Q 036132 33 LLPVTKDASTLQYVTQ---INQRTP-----LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~---i~iGtP-----~q~~~v~~DTGS~~~wv~~ 73 (437)
.+|+.. ...|.++ |.||.- .....++||||++++++|.
T Consensus 181 ~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 181 YVPVTY---QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEE---ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEccc---CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 455553 3467665 678762 3457899999999999984
No 53
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=33.35 E-value=30 Score=32.59 Aligned_cols=41 Identities=17% Similarity=0.132 Sum_probs=28.7
Q ss_pred ceEEeEeeCCCCccEEEE---EEecCC--CceEEEEEEcCCCceeeeC
Q 036132 31 ALLLPVTKDASTLQYVTQ---INQRTP--LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~---i~iGtP--~q~~~v~~DTGS~~~wv~~ 73 (437)
-..+|+.. ....|.++ |.||.+ .....++||||++++++|-
T Consensus 183 l~~~p~~~--~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~ 228 (325)
T 2apr_A 183 LTTVPIDN--SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPN 228 (325)
T ss_dssp CEEEECBC--TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEH
T ss_pred eEEEEccC--CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCH
Confidence 34566653 34567665 678762 3457899999999999984
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=33.24 E-value=34 Score=32.17 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=27.1
Q ss_pred EEeEeeCCCCccEEEE---EEecC--CCceEEEEEEcCCCceeeeC
Q 036132 33 LLPVTKDASTLQYVTQ---INQRT--PLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~---i~iGt--P~q~~~v~~DTGS~~~wv~~ 73 (437)
-+|+.. ....|.++ |.||. +.+...+++|||++++++|.
T Consensus 181 ~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 181 YTDVDN--SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp EEECBC--TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECH
T ss_pred EEECCC--CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCH
Confidence 355543 34567665 46776 23567899999999999984
No 55
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=33.20 E-value=36 Score=31.97 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=29.2
Q ss_pred ceEEeEeeCCCCccEEEE---EEecCC---CceEEEEEEcCCCceeeeC
Q 036132 31 ALLLPVTKDASTLQYVTQ---INQRTP---LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~ 73 (437)
-..+|+.. ....|.++ |.||.- .+...+++|||++++++|-
T Consensus 178 l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 224 (325)
T 1ibq_A 178 ITYTDADS--SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDD 224 (325)
T ss_dssp CEEEECBC--TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECH
T ss_pred eEEEEcCC--CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCH
Confidence 34567653 34567665 678763 3567899999999999984
No 56
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=31.50 E-value=31 Score=32.39 Aligned_cols=40 Identities=15% Similarity=0.011 Sum_probs=28.0
Q ss_pred eEEeEeeCCCCccEEEE---EEecC-CCceEEEEEEcCCCceeeeC
Q 036132 32 LLLPVTKDASTLQYVTQ---INQRT-PLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 32 ~~~Pl~~~~~~~~y~~~---i~iGt-P~q~~~v~~DTGS~~~wv~~ 73 (437)
..+|+.. ....|.++ |.||. +.....+++|||++++++|-
T Consensus 180 ~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~ 223 (323)
T 1bxo_A 180 TYTGVDN--SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDD 223 (323)
T ss_dssp EEEECBC--TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECH
T ss_pred EEEECCC--CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCH
Confidence 4566653 34567665 56775 23457899999999999984
No 57
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=30.52 E-value=27 Score=33.72 Aligned_cols=43 Identities=12% Similarity=0.070 Sum_probs=28.4
Q ss_pred ceEEeEeeCCCCccEEEE---EEecC-----CCceE---EEEEEcCCCceeeeC
Q 036132 31 ALLLPVTKDASTLQYVTQ---INQRT-----PLVPV---KVTLDLGGQFLWVDC 73 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~---i~iGt-----P~q~~---~v~~DTGS~~~wv~~ 73 (437)
-.-+||...+....|+++ |.||. |+..+ .+++|||++++.+|-
T Consensus 192 l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~ 245 (381)
T 1t6e_X 192 MPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRP 245 (381)
T ss_dssp CCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECH
T ss_pred ceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCH
Confidence 346788764333456664 67776 22222 389999999999984
No 58
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=30.12 E-value=49 Score=29.37 Aligned_cols=32 Identities=6% Similarity=0.075 Sum_probs=23.8
Q ss_pred CccEEEE---EEecCC----CceEEEEEEcCCCceeeeC
Q 036132 42 TLQYVTQ---INQRTP----LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 42 ~~~y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~ 73 (437)
...|.++ |.||.- .....+++|||++++++|.
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~ 136 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPV 136 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCH
Confidence 3456664 678763 2457899999999999984
No 59
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=29.09 E-value=36 Score=32.05 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=28.8
Q ss_pred ceEEeEeeCCCCccEEEE---EEecCC---CceEEEEEEcCCCceeeeC
Q 036132 31 ALLLPVTKDASTLQYVTQ---INQRTP---LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 31 ~~~~Pl~~~~~~~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~ 73 (437)
-..+|+.. ....|.++ |.||.- .....+++|||++++++|-
T Consensus 182 l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1oew_A 182 ITYTAVST--KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPA 228 (329)
T ss_dssp CEEEECBC--TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECH
T ss_pred eEEEEccC--CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCH
Confidence 34566653 34567665 678873 2457899999999999984
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=27.28 E-value=46 Score=32.35 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=28.1
Q ss_pred cceEEeEeeCCCCccEEEE---EEecCC------CceE--------EEEEEcCCCceeeeC
Q 036132 30 KALLLPVTKDASTLQYVTQ---INQRTP------LVPV--------KVTLDLGGQFLWVDC 73 (437)
Q Consensus 30 ~~~~~Pl~~~~~~~~y~~~---i~iGtP------~q~~--------~v~~DTGS~~~wv~~ 73 (437)
.-..+||...+ ...|.++ |.||.- +..+ .++||||++++++|-
T Consensus 216 ~l~~~Pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~ 275 (403)
T 3aup_A 216 DLAFTPLTITL-QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQ 275 (403)
T ss_dssp TEEEEECEECT-TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECH
T ss_pred ceeecccccCC-CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCH
Confidence 34567887743 3578775 668761 1112 189999999999984
No 61
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.07 E-value=42 Score=31.58 Aligned_cols=32 Identities=3% Similarity=-0.040 Sum_probs=23.7
Q ss_pred CccEEEE---EEecCC---CceEEEEEEcCCCceeeeC
Q 036132 42 TLQYVTQ---INQRTP---LVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 42 ~~~y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~ 73 (437)
...|.++ |.||.- .....+++|||++++++|-
T Consensus 192 ~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~ 229 (330)
T 1yg9_A 192 DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPK 229 (330)
T ss_dssp TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEH
T ss_pred CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCH
Confidence 3456565 778762 2456899999999999984
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=23.22 E-value=74 Score=24.76 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=24.8
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecHHHH
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHTSIY 308 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~~~~ 308 (437)
|+=.+..++++|+.+ .+++|||+-.+.+.....
T Consensus 6 ~~RP~v~v~I~Gq~~---------------e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL---------------NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTEEE---------------EEEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCEEE---------------EEEeccCCCcEEEccccC
Confidence 444456688998864 378999999999997543
No 63
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.65 E-value=92 Score=31.12 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=26.8
Q ss_pred EEeEeeCCCCccEEEE---EEecC-----CCceEEEEEEcCCCceeeeC
Q 036132 33 LLPVTKDASTLQYVTQ---INQRT-----PLVPVKVTLDLGGQFLWVDC 73 (437)
Q Consensus 33 ~~Pl~~~~~~~~y~~~---i~iGt-----P~q~~~v~~DTGS~~~wv~~ 73 (437)
-+|+.. ...|.+. |.||. +.....+++|||++++++|-
T Consensus 224 ~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 224 YVPVTQ---KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp EEEEEE---ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred EEeccC---CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 355543 3467665 67775 23467899999999999984
No 64
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=21.64 E-value=71 Score=28.15 Aligned_cols=27 Identities=15% Similarity=0.099 Sum_probs=23.7
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeee
Q 036132 44 QYVTQINQRTPLVPVKVTLDLGGQFLWVD 72 (437)
Q Consensus 44 ~y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 72 (437)
.-.+++.||. |.++.++|||.+++.+.
T Consensus 112 rP~~~iki~G--q~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 112 RPLVTIRIGG--QLKEALLDTGADDTVIE 138 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CCcEEEEECC--EEEeeeecccCCceeee
Confidence 3468899998 99999999999999885
No 65
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.34 E-value=64 Score=24.92 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=23.3
Q ss_pred eEEeEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecH
Q 036132 261 YFIGVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHT 305 (437)
Q Consensus 261 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~ 305 (437)
|+=.+..++++|+.+. +++|||+..+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 4445567889998753 78999999999884
No 66
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=21.14 E-value=70 Score=26.11 Aligned_cols=27 Identities=22% Similarity=0.256 Sum_probs=21.3
Q ss_pred eEeeEEEcCEEeccCCccccccccCCCcEEEeccCcceeecH
Q 036132 264 GVKSIKINGNTVPLNTSLLSIDKEGVGGTKISTVNPYTVLHT 305 (437)
Q Consensus 264 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDSGTt~~~lp~ 305 (437)
.+..++++|+.+. +++|||...+.|++
T Consensus 23 P~v~i~I~G~~~~---------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVGGQPVT---------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEETTEEEE---------------EEECTTCSSCEECS
T ss_pred CEEEEEECCEEEE---------------EEEeCCCCeEEEcc
Confidence 3455888887653 68999999999985
Done!