BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036133
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
Query: 1 MAASSSSSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPAL 60
MA+SSSSS +YDVFLSFRGEDTR +FT HLY LN++ IKTF DD+ + G I L
Sbjct: 1 MASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKG-IKTFQDDKRLEYGATIPGEL 59
Query: 61 LNAIEGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGS 120
AIE S+ ++V+FS++YA+S+WCLNELVKI+ECK Q VIP+FY V PS VR+Q S
Sbjct: 60 CKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKES 119
Query: 121 FGHGFDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLKKMEK 180
F F++ + ++K+ E +Q+WR AL E ++L G + + DA + +IV+ + K+ K
Sbjct: 120 FAKAFEEHETKYKDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCK 179
Query: 181 IT 182
I+
Sbjct: 180 IS 181
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Query: 1 MAASSSSSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPAL 60
M +SSS S YDVF SFRGED R SF HL L R K TFIDDE + R I P L
Sbjct: 1 MEIASSSGSRRYDVFPSFRGEDVRDSFLSHLLKEL--RGKAITFIDDE-IERSRSIGPEL 57
Query: 61 LNAIEGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGS 120
L+AI+ S+I++VIFSK+YASS WCLNELV+I +C Q+VIP+F+ V S+V+ QTG
Sbjct: 58 LSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGE 117
Query: 121 FGHGFDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLKK 177
FG F++ + E + Q W+ AL + +AG++ K+ +A ++ ++ EDVL+K
Sbjct: 118 FGKVFEETCKAKSEDEK--QSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRK 172
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 4/176 (2%)
Query: 3 ASSSSSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLN 62
ASSSS+S YDVF SFRGED R +F HL E I TF DD ++R I L
Sbjct: 2 ASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEF-ESKGIVTFRDDH-IKRSHTIGHELRA 59
Query: 63 AIEGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFG 122
AI SKISVV+FS++YASS WCL+EL++I++CK G V+PVFY V PSD+R QTG FG
Sbjct: 60 AIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFG 119
Query: 123 HGFDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLKKM 178
F L+ + E WR AL + +++ G + ++A ++ I +DVL+K+
Sbjct: 120 MSF--LETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKL 173
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 1 MAASSS--SSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISP 58
MAASSS + VF++FRG+D R F L + E I FID +EV D ++
Sbjct: 1 MAASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMRE-ANINVFIDKDEVVGTDLVN- 58
Query: 59 ALLNAIEGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQT 118
L I+ S+++VVIFSKDY SS+WCL+EL +I +C + G IP+FY ++PS V
Sbjct: 59 -LFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELK 117
Query: 119 GSFGHGFDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKF--RHDAQLVSKIVEDVLK 176
G FG F LK+++K PE QKW+ AL L G + R++ + +++++ ++ K
Sbjct: 118 GGFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGLRLAEKSDRNEREFMNEMILEIQK 177
Query: 177 KMEKIT 182
+ +I
Sbjct: 178 ALWQIA 183
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 14 VFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSKISVVI 73
VF++FRG+D R F L L ++ KI FID++E R IS L + I SKI++VI
Sbjct: 24 VFINFRGKDLRKGFMSFLKPAL-KKEKINVFIDEQEERGKYLIS--LFDTIGESKIALVI 80
Query: 74 FSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHGFDQLKQQFK 133
FS+ Y S WC++ELVKI E N I+IP+FY + V+ TG FG F L +++
Sbjct: 81 FSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQ 140
Query: 134 EKPEMVQKWRGALIETSHL 152
+P+ + KW AL L
Sbjct: 141 PEPKKLHKWTEALFSVCEL 159
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 1 MAASSS---SSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEIS 57
MA+SSS + VF+ FRG D R F L L E I FID+ E G E++
Sbjct: 1 MASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPALRE-ANINVFIDENEFL-GSEMA 58
Query: 58 PALLNAIEGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQ 117
LL IE S++++VIFS D+ S CLNEL KI E K IVIP+FY V PS V+
Sbjct: 59 -NLLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFL 117
Query: 118 TGSFGHGFDQLKQQFKEKPEMVQKWRGAL 146
G FG F L++ + + QKW+ AL
Sbjct: 118 EGKFGDNFRALERNNRHMLPITQKWKEAL 146
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Query: 12 YDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSKISV 71
Y VF++FRG++ R SF L + KI F D+ E+R G ++ L IE S+++V
Sbjct: 358 YQVFINFRGDELRNSFVGFLVKAM-RLEKINVFTDEVELR-GTNLN-YLFRRIEESRVAV 414
Query: 72 VIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHGFDQLKQQ 131
IFS+ Y S WCL+ELVK+ E +V+PVFY ++ + + G+FG L+ +
Sbjct: 415 AIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEWE 474
Query: 132 FKEKPEMVQKWRGAL 146
++ +PE +QKW+ AL
Sbjct: 475 YRSEPERIQKWKEAL 489
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 28/171 (16%)
Query: 7 SSSCNYDVFLSF-RGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIE 65
SSS +YDV + + R + + F HL +L R I + EV +A+
Sbjct: 663 SSSKDYDVVIRYGRADISNEDFISHLRASLCRR-GISVYEKFNEV-----------DALP 710
Query: 66 GSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHGF 125
++ +++ + Y S L+ ILE +HT ++V P+FY +SP D + ++ +
Sbjct: 711 KCRVLIIVLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSPYDFVCNSKNYERFY 765
Query: 126 DQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLK 176
+++P +KW+ AL E + + G+ T + +++L+ +IV D LK
Sbjct: 766 ------LQDEP---KKWQAALKEITQMPGYTLTD-KSESELIDEIVRDALK 806
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 37/164 (22%)
Query: 21 EDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSKISVVIFSKDYAS 80
E+ R SF HL L + FID + D +S + +E +++SV+I +
Sbjct: 14 EEVRYSFVSHLSKALQRKGVNDVFIDSD-----DSLSNESQSMVERARVSVMILPGNRTV 68
Query: 81 SKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHGFDQLKQQFKEKPEMVQ 140
S L++LVK+L+C+ Q+V+PV Y V S+
Sbjct: 69 S---LDKLVKVLDCQKNKDQVVVPVLYGVRSSET-------------------------- 99
Query: 141 KWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLKK---MEKI 181
+W AL + H S K D+QLV + V DV +K ME+I
Sbjct: 100 EWLSALDSKGFSSVHHSRKECSDSQLVKETVRDVYEKLFYMERI 143
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 65 EGSKISVVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHG 124
+G+++ VV+ S + + +K+++ NG +V+PVFY G
Sbjct: 70 DGARVLVVVISDEVEFYDPWFPKFLKVIQGWQNNGHVVVPVFY----------------G 113
Query: 125 FDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRH----DAQLVSKIVEDVLKKM 178
D L + V W + +E L H+S + D++LV +IV DV K+
Sbjct: 114 VDSLTR--------VYGWANSWLEAEKLTSHQSKILSNNVLTDSELVEEIVRDVYGKL 163
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 37 ERTKIKTFIDDEEVRRGDEISPALLNAIEGSKISVVIFSKDYASSKWCLNELVKILECKH 96
+ I FID+EEV RG + L I+ SKIS+ IFS+ SK N+L+K +
Sbjct: 66 QNKNINVFIDEEEV-RGKGLK-NLFKRIQDSKISLAIFSE----SKCDFNDLLK----NN 115
Query: 97 TNGQIVIPVFYSV 109
+ IP+FY V
Sbjct: 116 ESADEAIPIFYKV 128
>sp|Q9JLF7|TLR5_MOUSE Toll-like receptor 5 OS=Mus musculus GN=Tlr5 PE=2 SV=1
Length = 859
Score = 34.7 bits (78), Expect = 0.38, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 12 YDVFLSFRGED---TRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSK 68
YD + F +D + + HL + + R +++ ++ + G+ + A+ GS+
Sbjct: 694 YDAYFCFSSKDFEWAQNALLKHLDAHYSSRNRLRLCFEERDFIPGENHISNIQAAVWGSR 753
Query: 69 ISVVIFSKDYASSKWCLNEL--VKILECKHTNGQIVIPVFYSVSPSDV-RHQTGSFGHGF 125
+V + S+ + WCL + +++ V S+S + RH+T GF
Sbjct: 754 KTVCLVSRHFLKDGWCLEAFRYAQSRSLSDLKSILIVVVVGSLSQYQLMRHET---IRGF 810
Query: 126 DQLKQQFKEKPEMVQ 140
Q KQQ+ PE +Q
Sbjct: 811 LQ-KQQYLRWPEDLQ 824
>sp|O28051|FURH_ARCFU Ferric uptake regulation protein homolog OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_2232 PE=3 SV=1
Length = 128
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 15 FLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDE 48
F + GE TRV C ++N+ ER +I+ F+D+E
Sbjct: 72 FFTLEGE-TRVEVNCEPHFNVIEREEIRDFVDEE 104
>sp|Q03ES2|MUTS2_PEDPA MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=mutS2 PE=3 SV=1
Length = 785
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 124 GFDQLKQQFKEKPEMVQKWRGALIETSHLAGHESTKFRHDAQLVSKIVEDVLKKMEKIT 182
DQ+ +Q PE+ ++ ++ HL S++ R +++I DV +MEK T
Sbjct: 118 ALDQVIEQLVTIPEVEERLSNSIEGNGHLLNSASSELRRIRASITRIESDVRSRMEKFT 176
>sp|Q6IA17|SIGIR_HUMAN Single Ig IL-1-related receptor OS=Homo sapiens GN=SIGIRR PE=1 SV=3
Length = 410
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 12 YDVFLSFR--GEDTR-VSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSK 68
YD ++S+ ED + V+F L L R K F+DD ++ E S LL + +
Sbjct: 165 YDAYVSYSDCPEDRKFVNFI--LKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCR 222
Query: 69 ISVVIFSKDYASSKWC 84
+V+ S + S WC
Sbjct: 223 RLIVVLSDAFLSRAWC 238
>sp|B5YK96|TRMD_THEYD tRNA (guanine-N(1)-)-methyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=trmD PE=3 SV=1
Length = 255
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 4 SSSSSSCNYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGD 54
S N + L F E+ ++F C Y ++ER IK+FI DEE+ GD
Sbjct: 87 SPQGKRFNQKLALEFTREEAVLTFICGRYEGIDER--IKSFI-DEEISIGD 134
>sp|Q99JY1|TIRAP_MOUSE Toll/interleukin-1 receptor domain-containing adapter protein
OS=Mus musculus GN=Tirap PE=2 SV=1
Length = 241
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 11 NYDVFLSFRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSKIS 70
+YDV + ED + Y + ++ F+ + G I L A+ S
Sbjct: 105 DYDVCVCHSEEDLEAAQELVSYLE-GSQASLRCFLQLRDAAPGGAIVSELCQALSRSHCR 163
Query: 71 VVIFSKDYASSKWCLNELVKILECKHTNGQIVIPVFYSVS----PSDVRHQTGSFGHGFD 126
++ + + WC ++++ L + IP+ +S P ++R G G D
Sbjct: 164 ALLITPGFLRDPWCKYQMLQALTEAPASEGCTIPLLSGLSRAAYPPELRFMYYVDGRGKD 223
Query: 127 QLKQQFKE 134
Q KE
Sbjct: 224 GGFYQVKE 231
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 12 YDVFLSFRGEDTRVSFTCHLYYNLNE--RTKIKTFIDDEEVRRGDEISPALLNAIEGSKI 69
YD F+SF D + L L + +T K + + G +I + NAI S+
Sbjct: 834 YDAFVSFSATDEAWVYK-ELVPALEQGSQTTFKLCLHQRDFEPGIDIFENIQNAINTSRK 892
Query: 70 SVVIFSKDYASSKWCLNEL-VKILECKHTNGQIVIPVFYSVSPSDVRHQTGSFGHGFDQL 128
++ + S Y S+WC E+ + ++ + + ++I +F P+ ++ S+ H +L
Sbjct: 893 TLCVVSNHYLHSEWCRLEVQLASMKMFYEHKDVIILIFLEEIPN---YKLSSY-HRLRKL 948
Query: 129 --KQQFKEKPEMVQK 141
KQ F P+ V +
Sbjct: 949 INKQTFITWPDSVHQ 963
>sp|Q58471|Y1071_METJA Uncharacterized protein MJ1071 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1071 PE=4 SV=1
Length = 313
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 18 FRGEDTRVSFTCHLYYNLNERTKIKTFIDDEEVRRGDEISPALLNAIEGSKISVV---IF 74
FRGE + F + L+ R + + E+++ G+E +N + IS + IF
Sbjct: 73 FRGEKESILFLKSI--GLSPRITLNSLTYKEKIKLGNEFLKRCINFVPKEYISYIPQLIF 130
Query: 75 SKDYASSKWCLNELVKIL 92
K+Y CL E V L
Sbjct: 131 GKEYYFRGVCLKEYVSAL 148
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 30.0 bits (66), Expect = 8.8, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 113 DVRHQTGSFGHGFDQLKQQFKEKPEMVQKWRGAL-IETSHLAGHESTKFRHDAQLVSKIV 171
+ + Q G+ +++ K+ P + W+ L +HL G +TK+R + Q V+ +
Sbjct: 40 EYKQQNGTLYEQAFVMERACKQLPRSYKLWKMYLEFRINHLRGRNATKYRAEYQKVNALF 99
Query: 172 ED---VLKKMEKI 181
E +L KM KI
Sbjct: 100 ERALILLNKMPKI 112
>sp|Q7A1V4|ESXA_STAAW Virulence factor EsxA OS=Staphylococcus aureus (strain MW2) GN=esxA
PE=3 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|Q6GCJ0|ESXA_STAAS Virulence factor EsxA OS=Staphylococcus aureus (strain MSSA476)
GN=esxA PE=3 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|Q6GK29|ESXA_STAAR Virulence factor EsxA OS=Staphylococcus aureus (strain MRSA252)
GN=esxA PE=3 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|Q7A7S4|ESXA_STAAN Virulence factor EsxA OS=Staphylococcus aureus (strain N315)
GN=esxA PE=1 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|Q99WU4|ESXA_STAAM Virulence factor EsxA OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=esxA PE=1 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|P0C046|ESXA_STAAE Virulence factor EsxA OS=Staphylococcus aureus (strain Newman)
GN=esxA PE=3 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
>sp|Q5HJ91|ESXA_STAAC Virulence factor EsxA OS=Staphylococcus aureus (strain COL) GN=esxA
PE=3 SV=1
Length = 97
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 109 VSPSDVRHQTGSFGHGFDQLKQQF----KEKPEMVQKWRGALIETSHLAGHESTKFRHDA 164
+SP ++R ++ S+G G DQ++Q + + E+ W G ++F
Sbjct: 6 MSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF----------SRFEEQF 55
Query: 165 QLVSKIVEDVLKKMEKI 181
Q +S VE + +E+I
Sbjct: 56 QQLSPKVEKFAQLLEEI 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,270,327
Number of Sequences: 539616
Number of extensions: 2656925
Number of successful extensions: 6533
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 6506
Number of HSP's gapped (non-prelim): 33
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)