Query 036136
Match_columns 100
No_of_seqs 123 out of 645
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 16:40:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1und_A Advillin, P92; actin bi 61.3 2.9 9.8E-05 23.2 0.9 19 54-72 1-19 (37)
2 1s1g_A Potassium voltage-gated 55.1 8.1 0.00028 25.9 2.6 62 33-99 11-73 (124)
3 3drz_A BTB/POZ domain-containi 51.8 42 0.0014 21.3 5.6 60 34-98 5-69 (107)
4 1y74_B MLIN-2/CASK, peripheral 51.5 5.8 0.0002 22.5 1.2 20 54-73 26-49 (50)
5 2nz0_B Potassium voltage-gated 46.7 10 0.00035 26.1 2.0 62 33-99 33-95 (140)
6 2al3_A TUG long isoform; TUG U 44.8 25 0.00087 22.8 3.6 36 45-82 18-53 (90)
7 2xko_C PIPX, global nitrogen r 42.5 2.7 9.2E-05 27.8 -1.4 11 54-64 5-15 (89)
8 2vpk_A Myoneurin; transcriptio 42.5 37 0.0013 21.0 4.1 50 37-97 25-79 (116)
9 1nn7_A Potassium channel KV4.2 40.0 5.4 0.00019 25.9 -0.2 58 37-99 2-60 (105)
10 1yu8_X Villin; alpha helix, 3- 37.8 11 0.00037 23.4 0.9 20 54-73 31-50 (67)
11 2vkp_A BTB/POZ domain-containi 37.3 57 0.002 19.6 4.4 56 37-97 11-70 (109)
12 4a26_A Putative C-1-tetrahydro 37.0 1.2E+02 0.0041 23.3 6.9 52 32-99 36-92 (300)
13 4b4u_A Bifunctional protein fo 36.9 1E+02 0.0034 23.9 6.5 52 32-99 52-108 (303)
14 1r29_A B-cell lymphoma 6 prote 36.9 39 0.0013 21.2 3.6 53 37-97 32-88 (127)
15 1ujs_A Actin-binding LIM prote 35.0 14 0.00048 24.1 1.2 20 54-73 46-65 (88)
16 1qzp_A Dematin; villin headpie 33.4 9.6 0.00033 23.6 0.2 20 54-73 32-51 (68)
17 2k6m_S Supervillin; SVHP, HP, 31.9 12 0.00041 23.1 0.4 20 54-73 31-50 (67)
18 1y6i_A Mg-chelatase cofactor G 30.4 3.5 0.00012 31.2 -2.7 30 30-62 200-229 (233)
19 3n5b_B ASR0485 protein; PII, P 30.2 5.7 0.00019 27.2 -1.4 11 55-65 29-39 (112)
20 3ga1_A Nucleus accumbens-assoc 30.1 77 0.0026 19.9 4.2 50 37-97 36-89 (129)
21 2ccq_A P97, peptide N-glycanas 27.9 55 0.0019 21.1 3.2 43 56-98 46-96 (99)
22 3pmi_A PWWP domain-containing 27.5 17 0.00059 25.4 0.7 29 45-73 47-78 (134)
23 1z3x_A Putative cytidyltransfe 26.1 2.2 7.4E-05 32.5 -4.5 29 30-61 208-236 (238)
24 1w8x_N Protein P31, protein C, 25.6 13 0.00046 25.4 -0.2 28 33-62 86-123 (126)
25 1zav_U 50S ribosomal protein L 25.2 42 0.0014 17.5 1.8 13 61-73 18-30 (30)
26 2if5_A Zinc finger and BTB dom 24.4 1.3E+02 0.0043 18.5 4.4 54 37-97 28-84 (120)
27 1wy3_A Villin; structural prot 24.1 26 0.00088 19.0 0.8 17 56-72 1-17 (35)
28 1vd2_A Protein kinase C, IOTA 23.3 1.2E+02 0.0041 19.3 4.1 28 45-76 16-43 (89)
29 3b84_A Zinc finger and BTB dom 23.3 1.2E+02 0.0043 18.7 4.2 50 37-97 27-79 (119)
30 1b0a_A Protein (fold bifunctio 22.4 2.6E+02 0.0089 21.3 7.9 54 33-99 33-88 (288)
31 3qli_A Coenzyme A transferase; 21.9 50 0.0017 26.9 2.5 44 30-74 402-454 (455)
32 3ezo_A Malonyl COA-acyl carrie 20.7 59 0.002 24.3 2.5 40 35-75 10-49 (318)
33 1a4i_A Methylenetetrahydrofola 20.4 2.9E+02 0.01 21.1 6.6 54 33-99 35-90 (301)
34 3p2o_A Bifunctional protein fo 20.3 2.9E+02 0.0098 21.0 7.3 51 33-99 33-88 (285)
No 1
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=61.30 E-value=2.9 Score=23.22 Aligned_cols=19 Identities=16% Similarity=0.515 Sum_probs=17.1
Q ss_pred cCCCCHHHHHHHHhhHHhc
Q 036136 54 SFLNQPSFQELLSKAEEEF 72 (100)
Q Consensus 54 ~~L~hp~F~~LL~~aeEEf 72 (100)
.||+.-.|++++.++.+||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF 19 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQF 19 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHH
T ss_pred CCCCHHHHHHHHCcCHHHH
Confidence 4899999999999999998
No 2
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=55.09 E-value=8.1 Score=25.95 Aligned_cols=62 Identities=21% Similarity=0.258 Sum_probs=44.5
Q ss_pred CCceEEEEeeCCCceEEEEeecCCC-CHHHHHHHHhhHHhcCCcCCCCceeeeCcHHHHHHHHHhhcc
Q 036136 33 PKGHFAVYVGENQKKRFVIPVSFLN-QPSFQELLSKAEEEFGFDHPMGGLTIPCREDIFINVTSSLNE 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~-hp~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 99 (100)
....+.+-||. +||.+..+-|. +|. .+|..++...-++.+.|.+-|-.+...|..||+.++.
T Consensus 11 ~~~~V~LNVGG---~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~ 73 (124)
T 1s1g_A 11 QDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 73 (124)
T ss_dssp -CCEEEEEETT---EEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCC---EEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhc
Confidence 45678888996 99999987663 332 2344444444455556999999999999999998753
No 3
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=51.83 E-value=42 Score=21.34 Aligned_cols=60 Identities=20% Similarity=0.232 Sum_probs=42.9
Q ss_pred CceEEEEeeCCCceEEEEeecCCC-CH--HHHHHHHhhHHhcC--CcCCCCceeeeCcHHHHHHHHHhhc
Q 036136 34 KGHFAVYVGENQKKRFVIPVSFLN-QP--SFQELLSKAEEEFG--FDHPMGGLTIPCREDIFINVTSSLN 98 (100)
Q Consensus 34 kG~~aVyVG~~e~~RfvVp~~~L~-hp--~F~~LL~~aeEEfG--~~~~~G~L~IPC~~~~Fe~vl~~l~ 98 (100)
...+.+-||. ++|.+..+-|. +| .|..|... ..++. .+. .|.+-|-.+...|.+|+..++
T Consensus 5 ~~~v~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~-~~~~~~~~d~-~~~~fiDRdp~~F~~IL~~lr 69 (107)
T 3drz_A 5 SKWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDE-TGAYLIDRDPTYFGPVLNYLR 69 (107)
T ss_dssp CCEEEEEETT---EEEEEEHHHHTSSTTSHHHHHHTT-CGGGGGGBCT-TSCEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEECC---EEEEECHHHHhcCCCcchhHHHhc-CCCCCcCCCC-CceEEecCChHHHHHHHHHhC
Confidence 3567888996 99999987775 44 46666432 12332 233 489999999999999998775
No 4
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=51.47 E-value=5.8 Score=22.52 Aligned_cols=20 Identities=40% Similarity=0.662 Sum_probs=15.3
Q ss_pred cCCCCHHHHHHHHh----hHHhcC
Q 036136 54 SFLNQPSFQELLSK----AEEEFG 73 (100)
Q Consensus 54 ~~L~hp~F~~LL~~----aeEEfG 73 (100)
..|+.|.|++||+- |.++||
T Consensus 26 ~lL~~PHfqaLl~ahD~Va~~~y~ 49 (50)
T 1y74_B 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhc
Confidence 46788999999974 566664
No 5
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=46.74 E-value=10 Score=26.07 Aligned_cols=62 Identities=21% Similarity=0.255 Sum_probs=44.9
Q ss_pred CCceEEEEeeCCCceEEEEeecCC-CCHHHHHHHHhhHHhcCCcCCCCceeeeCcHHHHHHHHHhhcc
Q 036136 33 PKGHFAVYVGENQKKRFVIPVSFL-NQPSFQELLSKAEEEFGFDHPMGGLTIPCREDIFINVTSSLNE 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L-~hp~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 99 (100)
....+.+-||. +||.+..+-| ++|. .+|..++...-++.++|.+-|-.|...|++||+.++.
T Consensus 33 ~~~~V~LNVGG---~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~ 95 (140)
T 2nz0_B 33 QDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 95 (140)
T ss_dssp CCCEEEEEETT---EEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC---EEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhc
Confidence 45688888996 9999987765 3332 2444444444455556999999999999999998753
No 6
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=44.80 E-value=25 Score=22.84 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=27.8
Q ss_pred CceEEEEeecCCCCHHHHHHHHhhHHhcCCcCCCCcee
Q 036136 45 QKKRFVIPVSFLNQPSFQELLSKAEEEFGFDHPMGGLT 82 (100)
Q Consensus 45 e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~~~~~G~L~ 82 (100)
..+|+.|++. ..-.+.++|++|=+.||++.+...|.
T Consensus 18 n~rr~~VKvt--p~t~L~~VL~eaC~K~gl~~~~~~Lk 53 (90)
T 2al3_A 18 NGRRHTVKVT--PSTVLLQVLEDTCRRQDFNPSEYDLK 53 (90)
T ss_dssp TSCEEEECCC--TTSBHHHHHHHHHHHTTCCGGGCEEE
T ss_pred CCcEEEEEEC--CCCCHHHHHHHHHHHhCCChhhCeEE
Confidence 5789999983 34468899999999999986644443
No 7
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=42.50 E-value=2.7 Score=27.76 Aligned_cols=11 Identities=45% Similarity=0.948 Sum_probs=8.8
Q ss_pred cCCCCHHHHHH
Q 036136 54 SFLNQPSFQEL 64 (100)
Q Consensus 54 ~~L~hp~F~~L 64 (100)
.|||||.|.-|
T Consensus 5 ~YLNHPtFGlL 15 (89)
T 2xko_C 5 NYLNHPTFGLL 15 (89)
T ss_dssp CEEEETTTEEE
T ss_pred ccccCCccchh
Confidence 49999998654
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=42.47 E-value=37 Score=20.97 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=36.3
Q ss_pred EEEEeeCCCceEEEEeecCC--CCHHHHHHHHhhHHhcCCcCCCCceeee---CcHHHHHHHHHhh
Q 036136 37 FAVYVGENQKKRFVIPVSFL--NQPSFQELLSKAEEEFGFDHPMGGLTIP---CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L--~hp~F~~LL~~aeEEfG~~~~~G~L~IP---C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++... . + ..+.|+ .+.+.|+.++..+
T Consensus 25 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~~------~-~-~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 25 CTIVIGE---FQFKAHRNVLASFSEYFGAIYRST------S-E-NNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTC------C-C-SCEECCTTTCCHHHHHHHHHHH
T ss_pred EEEEECC---EEEeccHHHHhhcCHHHHHHHcCC------C-C-CeEEeecCCCCHHHHHHHHHHH
Confidence 3455664 6777776666 578999998765 2 2 578888 7899999998765
No 9
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=40.04 E-value=5.4 Score=25.90 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=37.7
Q ss_pred EEEEeeCCCceEEEEeecCC-CCHHHHHHHHhhHHhcCCcCCCCceeeeCcHHHHHHHHHhhcc
Q 036136 37 FAVYVGENQKKRFVIPVSFL-NQPSFQELLSKAEEEFGFDHPMGGLTIPCREDIFINVTSSLNE 99 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L-~hp~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~Fe~vl~~l~~ 99 (100)
+.+-||. +||.+..+-| ++|. .+|..++...-++.++|.+-|-.+...|.+||+.++.
T Consensus 2 V~LNVGG---~~f~t~~~TL~~~p~--s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~ 60 (105)
T 1nn7_A 2 IVLNVSG---TRFQTWQDTLERYPD--TLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRT 60 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCS--SSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCC--ccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhc
Confidence 3456775 8888877655 2331 1233333333344445899999999999999988753
No 10
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=37.79 E-value=11 Score=23.37 Aligned_cols=20 Identities=15% Similarity=0.444 Sum_probs=18.4
Q ss_pred cCCCCHHHHHHHHhhHHhcC
Q 036136 54 SFLNQPSFQELLSKAEEEFG 73 (100)
Q Consensus 54 ~~L~hp~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgms~~eF~ 50 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=37.25 E-value=57 Score=19.63 Aligned_cols=56 Identities=14% Similarity=0.211 Sum_probs=37.2
Q ss_pred EEEEeeC-CCceEEEEeecCC--CCHHHHHHHHhhHHhcCCcCCCCceeee-CcHHHHHHHHHhh
Q 036136 37 FAVYVGE-NQKKRFVIPVSFL--NQPSFQELLSKAEEEFGFDHPMGGLTIP-CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~-~e~~RfvVp~~~L--~hp~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++.++|-+.=..| ..|.|++++...-.|-. ..|.|| .+.+.|+.++..+
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-----~~i~l~~~~~~~f~~~l~~i 70 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-----SEIHIPDVEPAAFLILLKYM 70 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-----CEEEETTSCHHHHHHHHHHH
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-----CeEEeCCCCHHHHHHHHHHH
Confidence 3455664 2357888887777 68999999975433322 468887 6889999998765
No 12
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=36.99 E-value=1.2e+02 Score=23.33 Aligned_cols=52 Identities=21% Similarity=0.355 Sum_probs=38.9
Q ss_pred CCCceEEEEeeCCCceEEEEeecCCCCH---HHHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhhcc
Q 036136 32 VPKGHFAVYVGENQKKRFVIPVSFLNQP---SFQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSLNE 99 (100)
Q Consensus 32 vpkG~~aVyVG~~e~~RfvVp~~~L~hp---~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 99 (100)
.+.|...|.||+ +| ....--.++.+|.|++.. .+.+| ++.++++..+..||.
T Consensus 36 ~~P~Lavilvg~--------------dpaS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 92 (300)
T 4a26_A 36 RVPGLASIIVGQ--------------RMDSKKYVQLKHKAAAEVGMASF--NVELPEDISQEVLEVNVEKLNN 92 (300)
T ss_dssp CCCEEEEEEESC--------------CHHHHHHHHHHHHHHHHTTCEEE--EEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeCC--------------CHHHHHHHHHHHHHHHHcCCeEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 455889999998 33 344566788899999864 67886 778888888887764
No 13
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=36.95 E-value=1e+02 Score=23.90 Aligned_cols=52 Identities=15% Similarity=0.286 Sum_probs=39.3
Q ss_pred CCCceEEEEeeCCCceEEEEeecCCCCHH---HHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhhcc
Q 036136 32 VPKGHFAVYVGENQKKRFVIPVSFLNQPS---FQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSLNE 99 (100)
Q Consensus 32 vpkG~~aVyVG~~e~~RfvVp~~~L~hp~---F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 99 (100)
.+.|...|.||+ +|. ...--.++.||.|+... .+.+| ++.+++...+..||.
T Consensus 52 ~~P~LavIlVG~--------------dpaS~~Yv~~K~k~c~~vGi~s~--~~~lp~~~se~ell~~I~~LN~ 108 (303)
T 4b4u_A 52 RTPILATILVGD--------------DGASATYVRMKGNACRRVGMDSL--KIELPQETTTEQLLAEIEKLNA 108 (303)
T ss_dssp CCCEEEEEEESC--------------CHHHHHHHHHHHHHHHHTTCEEE--EEEECTTCCHHHHHHHHHHHHT
T ss_pred CCCcEEEEEeCC--------------CHHHHHHHHHHHHHHHHcCCeEE--EEecCccCCHHHHHHHHHHhcC
Confidence 456888999998 343 34566788899999864 57787 778888888888764
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=36.85 E-value=39 Score=21.24 Aligned_cols=53 Identities=11% Similarity=0.195 Sum_probs=38.4
Q ss_pred EEEEeeCCCceEEEEeecCC--CCHHHHHHHHhhHHhcCCcCCCCceee-e-CcHHHHHHHHHhh
Q 036136 37 FAVYVGENQKKRFVIPVSFL--NQPSFQELLSKAEEEFGFDHPMGGLTI-P-CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L--~hp~F~~LL~~aeEEfG~~~~~G~L~I-P-C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++|-+.=..| ..|.|++++...-.| .. ..|.| + .+.+.|+.++..+
T Consensus 32 v~l~v~~---~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~-~~i~l~~~~~~~~f~~ll~~~ 88 (127)
T 1r29_A 32 VVIVVSR---EQFRAHKTVLMACSGLFYSIFTDQLKR----NL-SVINLDPEINPEGFNILLDFM 88 (127)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTSTTTT----TC-SEEECCTTSCHHHHHHHHHHH
T ss_pred EEEEECC---EEEehHHHHHHHhCHHHHHHhcCCccC----CC-CEEEeCCCCCHHHHHHHHHHH
Confidence 3455664 6777766666 689999999865555 23 68999 4 6889999998765
No 15
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=35.00 E-value=14 Score=24.05 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=18.7
Q ss_pred cCCCCHHHHHHHHhhHHhcC
Q 036136 54 SFLNQPSFQELLSKAEEEFG 73 (100)
Q Consensus 54 ~~L~hp~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 16
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=33.39 E-value=9.6 Score=23.55 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=18.3
Q ss_pred cCCCCHHHHHHHHhhHHhcC
Q 036136 54 SFLNQPSFQELLSKAEEEFG 73 (100)
Q Consensus 54 ~~L~hp~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 32 ~yLsdedF~~vFgmsr~eF~ 51 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEFG 51 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 17
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=31.94 E-value=12 Score=23.12 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=18.6
Q ss_pred cCCCCHHHHHHHHhhHHhcC
Q 036136 54 SFLNQPSFQELLSKAEEEFG 73 (100)
Q Consensus 54 ~~L~hp~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgmsr~eF~ 50 (67)
T 2k6m_S 31 IYLTDEDFEFALDMTRDEYN 50 (67)
T ss_dssp GGSCHHHHHHHTSSCHHHHT
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 18
>1y6i_A Mg-chelatase cofactor GUN4; helix-bundle, porphyrin binding, ligand binding protein; 1.78A {Synechocystis SP} SCOP: a.118.1.22 a.261.1.1
Probab=30.36 E-value=3.5 Score=31.20 Aligned_cols=30 Identities=20% Similarity=0.421 Sum_probs=19.5
Q ss_pred ccCCCceEEEEeeCCCceEEEEeecCCCCHHHH
Q 036136 30 KVVPKGHFAVYVGENQKKRFVIPVSFLNQPSFQ 62 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~e~~RfvVp~~~L~hp~F~ 62 (100)
..+|+||+|..-.- ..-| +=-+.|+||.|.
T Consensus 200 l~AP~GHLP~~~~l-rG~~--l~~~ll~hpa~~ 229 (233)
T 1y6i_A 200 LSAPQGHLPLLNQL-RGVR--VAESLYRHPVWS 229 (233)
T ss_dssp TTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHH
T ss_pred CCCCCCCCCCcccc-chHH--HHHHHHCCcccc
Confidence 36899999986521 1111 445778888874
No 19
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=30.20 E-value=5.7 Score=27.16 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=8.9
Q ss_pred CCCCHHHHHHH
Q 036136 55 FLNQPSFQELL 65 (100)
Q Consensus 55 ~L~hp~F~~LL 65 (100)
|||||.|.-|-
T Consensus 29 YLNHPTFGLLy 39 (112)
T 3n5b_B 29 YINHPTWGLLY 39 (112)
T ss_dssp EEEETTTEEEE
T ss_pred hccCCccchhe
Confidence 99999986553
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=30.07 E-value=77 Score=19.93 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=36.1
Q ss_pred EEEEeeCCCceEEEEeecCCC--CHHHHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhh
Q 036136 37 FAVYVGENQKKRFVIPVSFLN--QPSFQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L~--hp~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++|-+.=..|. .|.|++++... .. ..+.|| .+.+.|+.++..+
T Consensus 36 v~l~v~~---~~~~~Hk~vLaa~S~~F~~~f~~~-------~~-~~i~l~~~~~~~~f~~ll~~i 89 (129)
T 3ga1_A 36 VSVVVKG---HAFKAHRAVLAASSSYFRDLFNNS-------RS-AVVELPAAVQPQSFQQILSFC 89 (129)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHHHC-------CC-SEEECCTTCCHHHHHHHHHHH
T ss_pred eEEEECC---EEEEehHHHHHHcCHHHHHHHcCC-------CC-CEEEECCCCCHHHHHHHHHHH
Confidence 4556664 66666655553 68899988765 23 689997 8999999998765
No 21
>2ccq_A P97, peptide N-glycanase homolog; glycoprotein; 1.6A {Homo sapiens} SCOP: d.314.1.1 PDB: 2hpl_A 2hpj_A 2cm0_A
Probab=27.90 E-value=55 Score=21.08 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHhhH------HhcCCcCCCCceeee--CcHHHHHHHHHhhc
Q 036136 56 LNQPSFQELLSKAE------EEFGFDHPMGGLTIP--CREDIFINVTSSLN 98 (100)
Q Consensus 56 L~hp~F~~LL~~ae------EEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~ 98 (100)
+++|.|++=+...+ +..||...++.|.+| ++....+.+...|.
T Consensus 46 ~~N~~f~~~v~~~~G~~e~L~a~GF~~~~~~l~lp~~~~~~~l~~~~d~l~ 96 (99)
T 2ccq_A 46 IGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIA 96 (99)
T ss_dssp TTCHHHHHHTTTSTTHHHHHHHHTCEECSSEEECCTTSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHhcCCccHHHHHHHccceeCCCeeecCCCCCHHHHHHHHHHHH
Confidence 67889988665432 346999777889998 66777776665553
No 22
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=27.49 E-value=17 Score=25.45 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=25.5
Q ss_pred CceEEEEeecCCCCH---HHHHHHHhhHHhcC
Q 036136 45 QKKRFVIPVSFLNQP---SFQELLSKAEEEFG 73 (100)
Q Consensus 45 e~~RfvVp~~~L~hp---~F~~LL~~aeEEfG 73 (100)
+++=|.||+.-|+|= .-++|+++|.|.||
T Consensus 47 ekrGi~V~LrrLK~fDC~ek~~L~~rAre~Y~ 78 (134)
T 3pmi_A 47 KMKGFTVSLKSLKHFDCKEKQTLLNQAREDFN 78 (134)
T ss_dssp TSCCEEEEGGGCEETTSTTHHHHHHHHTTTCH
T ss_pred ccCceEeEcccCCCCChHhHHHHHHHHHHHhc
Confidence 678899999988874 58999999999998
No 23
>1z3x_A Putative cytidyltransferase; transferase activator; 1.50A {Thermosynechococcus elongatus} SCOP: a.118.1.22 a.261.1.1 PDB: 1z3y_A
Probab=26.11 E-value=2.2 Score=32.50 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=18.3
Q ss_pred ccCCCceEEEEeeCCCceEEEEeecCCCCHHH
Q 036136 30 KVVPKGHFAVYVGENQKKRFVIPVSFLNQPSF 61 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~e~~RfvVp~~~L~hp~F 61 (100)
..+|+||+|..-. -+=.-+=-+.|+||.|
T Consensus 208 l~AP~GHLP~~~~---lrGv~l~~~ll~hpa~ 236 (238)
T 1z3x_A 208 LSAPRGHLPLTNQ---LRGVQVLNALLNHPAW 236 (238)
T ss_dssp TTSCTTCCSCCCC---TTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCcc---cccHHHHHHHHcCccc
Confidence 3689999998642 1112234567888876
No 24
>1w8x_N Protein P31, protein C, GPC; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=25.55 E-value=13 Score=25.42 Aligned_cols=28 Identities=36% Similarity=0.612 Sum_probs=17.3
Q ss_pred CCceEEEEeeCCCceEEE----------EeecCCCCHHHH
Q 036136 33 PKGHFAVYVGENQKKRFV----------IPVSFLNQPSFQ 62 (100)
Q Consensus 33 pkG~~aVyVG~~e~~Rfv----------Vp~~~L~hp~F~ 62 (100)
..||+|+.|-. +-.|+ +|+-|||.|+-+
T Consensus 86 ~QGYfPlL~~~--~~KFv~~~~~~GKks~P~~FlNF~IA~ 123 (126)
T 1w8x_N 86 KQGYFPLLVPG--RAKFVARHLGSGKKSVPLFFLNFTIAQ 123 (126)
T ss_dssp CCSSCCEEECC--SSSSEEEEEEEESSCCCCSCCC-----
T ss_pred Ccccceeeccc--hhhhhhhhhcCCCcceeeEEEeceeee
Confidence 46999999963 44454 688899988744
No 25
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=25.20 E-value=42 Score=17.49 Aligned_cols=13 Identities=46% Similarity=0.882 Sum_probs=10.4
Q ss_pred HHHHHHhhHHhcC
Q 036136 61 FQELLSKAEEEFG 73 (100)
Q Consensus 61 F~~LL~~aeEEfG 73 (100)
..+|.+.-||+||
T Consensus 18 l~eLvk~lEe~fG 30 (30)
T 1zav_U 18 LAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 4678888899998
No 26
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=24.37 E-value=1.3e+02 Score=18.47 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=35.5
Q ss_pred EEEEeeCCCceEEEEeecCC--CCHHHHHHHHhhHHhcCCcCCCCceeee-CcHHHHHHHHHhh
Q 036136 37 FAVYVGENQKKRFVIPVSFL--NQPSFQELLSKAEEEFGFDHPMGGLTIP-CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L--~hp~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++|-+.=..| ..|.|++++...-.|- .. ..+.|+ .+.+.|+.++..+
T Consensus 28 v~l~v~~---~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~-~~i~l~~~~~~~f~~ll~~~ 84 (120)
T 2if5_A 28 VVILVEG---REFPTHRSVLAACSQYFKKLFTSGAVVD---QQ-NVYEIDFVSAEALTALMDFA 84 (120)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHC--------CC-SEEECCSSCHHHHHHHHHHH
T ss_pred eEEEECC---EEEeHHHHHHHHhCHHHHHHhcCCcccc---CC-ceEEeCCCCHHHHHHHHHHH
Confidence 3455664 6777766666 4789999987543331 22 578888 6889999998765
No 27
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=24.12 E-value=26 Score=19.02 Aligned_cols=17 Identities=18% Similarity=0.497 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHhhHHhc
Q 036136 56 LNQPSFQELLSKAEEEF 72 (100)
Q Consensus 56 L~hp~F~~LL~~aeEEf 72 (100)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vFgmsr~eF 17 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp CCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 45667888888888887
No 28
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=23.35 E-value=1.2e+02 Score=19.31 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=23.3
Q ss_pred CceEEEEeecCCCCHHHHHHHHhhHHhcCCcC
Q 036136 45 QKKRFVIPVSFLNQPSFQELLSKAEEEFGFDH 76 (100)
Q Consensus 45 e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~~~ 76 (100)
+-.|+-||. ...|++|.++-.+-|++..
T Consensus 16 di~~~~v~~----~i~~~~L~~kv~~~~~~~~ 43 (89)
T 1vd2_A 16 DIMITHFEP----SISFEGLCNEVRDMCSFDN 43 (89)
T ss_dssp CEEEEEECT----TCCHHHHHHHHHHHTTCCS
T ss_pred eEEEEECCC----CCCHHHHHHHHHHHhCCCC
Confidence 577888886 4689999999999999753
No 29
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=23.31 E-value=1.2e+02 Score=18.67 Aligned_cols=50 Identities=24% Similarity=0.237 Sum_probs=35.0
Q ss_pred EEEEeeCCCceEEEEeecCC--CCHHHHHHHHhhHHhcCCcCCCCceeee-CcHHHHHHHHHhh
Q 036136 37 FAVYVGENQKKRFVIPVSFL--NQPSFQELLSKAEEEFGFDHPMGGLTIP-CREDIFINVTSSL 97 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L--~hp~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~Fe~vl~~l 97 (100)
+.+.||+ ++|-+.=..| ..|.|++++... . . +.|.|| .+.+.|+.++..+
T Consensus 27 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~-----~--~-~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 27 ATLDVGG---LVFKAHWSVLACCSHFFQSLYGDG-----S--G-GSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTT-----T--C-CCEEECGGGHHHHHHHHHHH
T ss_pred eEEEECC---EEEEeeHHHHhhcCHHHHHHHCCC-----C--C-CeEEeCCCCHHHHHHHHHHH
Confidence 3455664 6676665555 478899988752 2 2 579998 5788999998765
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=22.44 E-value=2.6e+02 Score=21.29 Aligned_cols=54 Identities=26% Similarity=0.370 Sum_probs=38.2
Q ss_pred CCceEEEEeeCCCceEEEEeecCCCCHHHHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhhcc
Q 036136 33 PKGHFAVYVGENQKKRFVIPVSFLNQPSFQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSLNE 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 99 (100)
+.|...|.||+ +.. .-....--.++.||.|+... .+.+| ++.++++..+..||.
T Consensus 33 ~P~LavilvG~-dpa----------S~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 88 (288)
T 1b0a_A 33 APGLAVVLVGS-NPA----------SQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 88 (288)
T ss_dssp CCEEEEEEESC-CHH----------HHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CceEEEEEeCC-Chh----------HHHHHHHHHHHHHHcCCEEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 35888999998 210 11234456678899999975 68888 677888888887764
No 31
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=21.87 E-value=50 Score=26.86 Aligned_cols=44 Identities=20% Similarity=0.349 Sum_probs=30.6
Q ss_pred ccCCCceEEEEeeC---------CCceEEEEeecCCCCHHHHHHHHhhHHhcCC
Q 036136 30 KVVPKGHFAVYVGE---------NQKKRFVIPVSFLNQPSFQELLSKAEEEFGF 74 (100)
Q Consensus 30 ~~vpkG~~aVyVG~---------~e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~ 74 (100)
...|++++-+.|-| .-++|-.-=++ +-||.||+.|.+++++.|+
T Consensus 402 vtt~~~~v~~vvTE~Gva~l~G~s~~eRa~~lI~-iAHPdfR~~L~~~A~~~~~ 454 (455)
T 3qli_A 402 VTTPRIDTHYIVTEFGAVNLKGLSSTERALRIIE-LAHPDFRDELTQAAKKMHL 454 (455)
T ss_dssp CSBCTTTCCEEEETTEEEECTTCCHHHHHHHHHT-TSCHHHHHHHHHHHHHTTC
T ss_pred cccCcccccEEEeccEEEECCCCCHHHHHHHHHH-ccCcchHHHHHHHHHHcCC
Confidence 45688888777755 12344433344 8899999999988888764
No 32
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=20.74 E-value=59 Score=24.31 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=25.3
Q ss_pred ceEEEEeeCCCceEEEEeecCCCCHHHHHHHHhhHHhcCCc
Q 036136 35 GHFAVYVGENQKKRFVIPVSFLNQPSFQELLSKAEEEFGFD 75 (100)
Q Consensus 35 G~~aVyVG~~e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~~ 75 (100)
-..-|+-|.|. +..=.=-+.+++|.|++.++++.+.+|++
T Consensus 10 ~~~f~F~GQGs-Q~~gMg~~L~~~p~fr~~~~~~~~~lg~~ 49 (318)
T 3ezo_A 10 KFAFVFPGQGS-QSVGMLNAFADVAVVRETLDEASDALGQD 49 (318)
T ss_dssp CEEEEECCTTC-CCTTTTGGGTTCHHHHHHHHHHHHHHSSC
T ss_pred CeEEEECCcch-hhhhHHHHHhhCHHHHHHHHHHHHHhCCC
Confidence 35556667631 11111112238999999999999999875
No 33
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=20.45 E-value=2.9e+02 Score=21.13 Aligned_cols=54 Identities=24% Similarity=0.343 Sum_probs=38.6
Q ss_pred CCceEEEEeeCCCceEEEEeecCCCCHHHHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhhcc
Q 036136 33 PKGHFAVYVGENQKKRFVIPVSFLNQPSFQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSLNE 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hp~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 99 (100)
..|...|.||++ .. ......--.++.||.|+... .+.+| ++.++++..+..||.
T Consensus 35 ~P~LavilvG~d-pa----------S~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 90 (301)
T 1a4i_A 35 TPRLAILQVGNR-DD----------SNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLNE 90 (301)
T ss_dssp CCEEEEEEESCC-HH----------HHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCC-hh----------HHHHHHHHHHHHHHcCCEEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 358889999972 10 12345566678899999875 67888 677888888888764
No 34
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=20.31 E-value=2.9e+02 Score=20.98 Aligned_cols=51 Identities=20% Similarity=0.325 Sum_probs=39.1
Q ss_pred CCceEEEEeeCCCceEEEEeecCCCCHH---HHHHHHhhHHhcCCcCCCCceeee--CcHHHHHHHHHhhcc
Q 036136 33 PKGHFAVYVGENQKKRFVIPVSFLNQPS---FQELLSKAEEEFGFDHPMGGLTIP--CREDIFINVTSSLNE 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hp~---F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~Fe~vl~~l~~ 99 (100)
+.|...|.||+ +|. ...--.++.+|.|+... .+.+| ++.++++..+..+|.
T Consensus 33 ~P~Lavilvg~--------------dpaS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 88 (285)
T 3p2o_A 33 ESCLAVILVGD--------------NPASQTYVKSKAKACEECGIKSL--VYHLNENITQNELLALINTLNH 88 (285)
T ss_dssp CCEEEEEEESC--------------CHHHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCC--------------CHHHHHHHHHHHHHHHHcCCeEE--EEECCCCCCHHHHHHHHHHHhC
Confidence 45888899998 333 35566788899999864 68888 888889888887763
Done!