BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036141
(220 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147783659|emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 117/217 (53%), Positives = 158/217 (72%), Gaps = 7/217 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 66 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 125
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 126 YYSAFLTLWHEYADLVTADVPIAALSTIQXIHATTRRDQFLMKLRPEYESVRSSLLNRSP 185
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSKGRDM--RQVQCFSC 176
PSLD+CF ELLREEQRL+TQ IL+Q+ +AYAA + +G M + +QCF C
Sbjct: 186 VPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAA---QGRGPPMHSKNLQCFCC 242
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
KEY HI C KKFC+YCKK GHIIKEC RPQN QA
Sbjct: 243 KEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQA 279
>gi|147793835|emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera]
Length = 1303
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 117/218 (53%), Positives = 158/218 (72%), Gaps = 8/218 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 208 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 267
Query: 61 YFSGFQNLWAEYVDMIYVQVP-IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y+S F LW EY D++ VP I +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 268 YYSAFLTLWHEYADLVTADVPIIATLSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRS 327
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSKGRDM--RQVQCFS 175
PSLD+CF ELLREEQRL+TQ IL+Q+ +AYAA + +G M + +QCF
Sbjct: 328 PVPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAA---QGRGPPMHSKNLQCFC 384
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
CKEY HI C KKFC+YCKK GHIIKEC RPQN QA
Sbjct: 385 CKEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQA 422
>gi|359484000|ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
Length = 1689
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 157/217 (72%), Gaps = 7/217 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 66 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 125
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLR +YE+ RS+L+NR
Sbjct: 126 YYSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRLEYESVRSSLLNRSP 185
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNA--IAYAAAHWKSKGRDM--RQVQCFSC 176
PSLD+CF ELLREEQRL+TQ IL+Q+ +AYAA + +G M + +QCF C
Sbjct: 186 VPSLDICFGELLREEQRLSTQAILEQSHGSSGTAIVAYAA---QGRGPPMHSKNLQCFCC 242
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
KEY HI C KKFC+YCKK GHIIKEC RPQN QA
Sbjct: 243 KEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQA 279
>gi|147780419|emb|CAN67992.1| hypothetical protein VITISV_015686 [Vitis vinifera]
Length = 1308
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 152/214 (71%), Gaps = 1/214 (0%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 55 MSWLIGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 114
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKL P+YE+ RS+L+NR
Sbjct: 115 YYSAFLTLWHEYADLVTTDVPIAALSTIQTIHVTTRRDQFLMKLCPEYESVRSSLLNRSP 174
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYA-AAHWKSKGRDMRQVQCFSCKEY 179
PSLD+CF ELLREEQRL+TQ IL+Q+ A AA + + +QCF CKEY
Sbjct: 175 VPSLDICFGELLREEQRLSTQAILEQSHGSSGTTTVAYAAQGREPPMHSKNLQCFCCKEY 234
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
HI C KKFC+YCKK GHIIKEC RPQN QA
Sbjct: 235 GHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQA 268
>gi|147806416|emb|CAN76550.1| hypothetical protein VITISV_031906 [Vitis vinifera]
Length = 1162
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 151/208 (72%), Gaps = 1/208 (0%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++GSI ++ NL+ TAK+MWEYL+++YNQDN A LE EIA ++QGNLSI+
Sbjct: 36 VSWLLGSIKPHMVNNLRSFSTAKEMWEYLRRIYNQDNNACCFQLELEIAYFTQGNLSIEQ 95
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+SGF NLW EY +IY +VP E L+ +Q V+E+S+ DQFLMKLR +YE ++ L+ R+
Sbjct: 96 YYSGFLNLWGEYSGIIYAKVPKEVLSALQTVYEESRCDQFLMKLRAEYETTQAGLLKRNP 155
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
P+LD+C ELLREEQRLATQ + Q ++H + A A + +GR+ Q+QC+SCKE+
Sbjct: 156 VPTLDICLGELLREEQRLATQAEMGQERLHSEIVNVAYAT-QGRGREKGQIQCYSCKEFG 214
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRP 208
HI C K +CNYC+K GHIIKECP RP
Sbjct: 215 HIATSCTKPYCNYCRKRGHIIKECPIRP 242
>gi|147866201|emb|CAN81968.1| hypothetical protein VITISV_037079 [Vitis vinifera]
Length = 1157
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 140/216 (64%), Gaps = 18/216 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ +LNL+ +KT MW YL VYNQDN+A+R LEYE+A ++QG+LSI+
Sbjct: 73 MTWILSSVEPHFVLNLRPYKTVATMWNYLHTVYNQDNSARRFQLEYEMANFTQGSLSIEE 132
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
YFSGFQ LW +Y D++Y VP +L+ VQ VH SKRDQFLMKLRP +E ARSNLMNR L
Sbjct: 133 YFSGFQTLWIDYSDIVYANVPAAALSVVQAVHATSKRDQFLMKLRPDFEIARSNLMNRHL 192
Query: 121 SPSLDVCFKELLREEQRLATQTILQQ--NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
PSL+ C ELLREEQ + TQ ++ N ++AY CFSCK+
Sbjct: 193 VPSLNACLSELLREEQHIVTQATMEHRANVSAPVSVAY----------------CFSCKD 236
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
+ I C KKFCNY KK GHII C RP+ Q +
Sbjct: 237 FGQIARDCPKKFCNYYKKQGHIISVCLIRPKRKQGT 272
>gi|147839099|emb|CAN61564.1| hypothetical protein VITISV_007963 [Vitis vinifera]
Length = 369
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 142/213 (66%), Gaps = 17/213 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++ S++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ I + G+LSIQ+
Sbjct: 1 MSWLLSSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIVMFQHGSLSIQD 60
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F W EY D++ VPI++L+ +Q +H + RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 61 YYSAFLTFWHEYADLVTADVPIDALSTIQTIHATTLRDQFLMKLRPEYESVRSSLLNRSH 120
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSLD+CF ELLREEQ L+TQ I++Q+ S G CF KEY
Sbjct: 121 VPSLDICFGELLREEQHLSTQAIMEQSH-------------GSSG----TATCFCYKEYE 163
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
HI C KK C+YCKK GHIIKEC RPQN QA
Sbjct: 164 HIAATCPKKLCSYCKKKGHIIKECLIRPQNRQA 196
>gi|147770281|emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]
Length = 1652
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 155/219 (70%), Gaps = 11/219 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H +A+ MW YLKKVY+QDN A+R L++ IA + G+LSIQ+
Sbjct: 160 MSWLLGSVEPHIVTHLRPHCSAQSMWAYLKKVYHQDNDARRFQLDHAIAMFQHGSLSIQD 219
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLR KYE+ S+L+N+
Sbjct: 220 YYSTFLTLWHEYADLVTADVPIAALSTIQTIHTTTQRDQFLMKLRSKYESVCSSLLNKSH 279
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDN----AIAYAAAHWKSKGRDM--RQVQCF 174
PSLD+ F ELLR+EQRL+TQ IL+Q+ H N +AYAA + +G M + +QCF
Sbjct: 280 VPSLDIFFGELLRKEQRLSTQAILEQS--HGNYGTTTVAYAA---QGRGPRMHSKNLQCF 334
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
CKEY HI C KKFC+YCKK GHIIKEC RPQN Q
Sbjct: 335 CCKEYGHIAATCPKKFCSYCKKKGHIIKECRIRPQNRQT 373
>gi|147802545|emb|CAN77664.1| hypothetical protein VITISV_007221 [Vitis vinifera]
Length = 958
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 135/216 (62%), Gaps = 29/216 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ L+LN + +KT MW YL VYNQDN+A+R LE E A ++QG+LSI+
Sbjct: 63 MTWILSSVEPHLVLNQRPYKTVAVMWNYLHTVYNQDNSARRFQLECEKANFTQGSLSIEE 122
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
YF +H SKRDQFLMKLRP +E ARSN+MNR
Sbjct: 123 YFFA--------------------------MHATSKRDQFLMKLRPDFEIARSNMMNRHH 156
Query: 121 SPSLDVCFKELLREEQRLATQTILQQ--NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
PSLDVC ELLREEQR+ TQ ++ N ++AYAA ++KG+DMR VQCFSCK+
Sbjct: 157 VPSLDVCLSELLREEQRIVTQATMEHRANVSAPVSVAYAA-QGQNKGQDMRVVQCFSCKD 215
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
+ HI C KKFCNYCKK GHII CP RP+ Q +
Sbjct: 216 FDHIARDCPKKFCNYCKKQGHIISVCPIRPERKQGT 251
>gi|147846218|emb|CAN79492.1| hypothetical protein VITISV_033373 [Vitis vinifera]
Length = 2116
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 137/211 (64%), Gaps = 23/211 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS+ ++ L+ H++A+ MW YLKKVY+QDN A+R LE+ IA
Sbjct: 885 MSWLLGSVKPHIVTYLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAM---------- 934
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
FQ++ A+ VPI +L+ +Q +H ++RDQFLMKLR +YE+ RS+L+NR
Sbjct: 935 ----FQHVTAD--------VPIAALSTIQTIHATTRRDQFLMKLRSEYESVRSSLLNRSH 982
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYA-AAHWKSKGRDMRQVQCFSCKEY 179
PSLD+CF ELLREEQRL+TQ IL+Q+ + A AA + + +QCF CKEY
Sbjct: 983 VPSLDICFGELLREEQRLSTQAILEQSHGSSGTVTVAYAAQGRGPPMHSKNLQCFCCKEY 1042
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKECPTRPQN 210
HI V C KKFC+YCKK GHIIKEC RPQN
Sbjct: 1043 GHIAVTCPKKFCSYCKKKGHIIKECRIRPQN 1073
>gi|147776830|emb|CAN72410.1| hypothetical protein VITISV_014973 [Vitis vinifera]
Length = 1201
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 138/217 (63%), Gaps = 27/217 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ I + G++SIQ+
Sbjct: 66 MSWLLGSMEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIVMFQHGSISIQD 125
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++ DQFLMKL +YE+
Sbjct: 126 YYSAFLTLWHEYADLVTADVPIATLSTIQTIHATTRHDQFLMKLHLEYES---------- 175
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDN--AIAYAAAHWKSKGRDM--RQVQCFSC 176
LLREEQRL+TQ IL+Q+ +AYAA + +G M + +QCF C
Sbjct: 176 ----------LLREEQRLSTQVILEQSHGSSGTATVAYAA---QGRGPPMHSKNLQCFCC 222
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
KEYRHI C KKFC+YCKK GHIIKEC P N QA
Sbjct: 223 KEYRHIAATCPKKFCSYCKKKGHIIKECRIHPLNRQA 259
>gi|147814856|emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera]
Length = 1159
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 127/214 (59%), Gaps = 31/214 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ L+LNL+ +KT MW YL VYNQDN+A+R LEY +A ++QG+LSI+
Sbjct: 341 MTWILSSVEPHLVLNLRPYKTVVAMWNYLHTVYNQDNSARRFQLEYXMANFTQGSLSIEE 400
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
YFS +L+ VQ VH SKRD LMKLRP +E ARSN+MN
Sbjct: 401 YFS--------------------ALSAVQAVHXTSKRDXXLMKLRPDFEIARSNMMNHHX 440
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSLD C ELL EEQ + TQ + A+ ++K R MR VQCFSCK++
Sbjct: 441 XPSLDACLSELLSEEQHIVTQATXEH-----------XANGQNKXRXMRVVQCFSCKDFG 489
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
H C KFCNYCKK GHII CP RP+ Q +
Sbjct: 490 HXARDCPXKFCNYCKKQGHIISXCPIRPERKQGT 523
>gi|357516265|ref|XP_003628421.1| hypothetical protein MTR_8g057760 [Medicago truncatula]
gi|355522443|gb|AET02897.1| hypothetical protein MTR_8g057760 [Medicago truncatula]
Length = 457
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 134/208 (64%), Gaps = 16/208 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS+D +++LNL+ +KTA MW YLKKVYNQ+N A+R LE++ + + +L
Sbjct: 65 MSWVLGSVDPNIVLNLRAYKTAATMWNYLKKVYNQNNAARRFQLEHDKSLFKHDSLFNSE 124
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++S F NLWAEY +++Y + E L+ +Q VHE +KRDQFLMKLR ++E NLM+R+
Sbjct: 125 FYSQFINLWAEYTEIVYADLTSEGLSSLQSVHETTKRDQFLMKLRSEFECIWFNLMHRNP 184
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSLD CF +LL EEQRL TQ+I++ K+ +AY A K+K DM QCF CK+
Sbjct: 185 VPSLDACFNDLLHEEQRLLTQSIIEDQKLPTVLVAY-VARGKTKSHDMSDFQCFCCKKLG 243
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRP 208
H GHI+KECP RP
Sbjct: 244 HY---------------GHILKECPIRP 256
>gi|147838251|emb|CAN72268.1| hypothetical protein VITISV_017854 [Vitis vinifera]
Length = 972
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 19/200 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKK LE+ IA + +LSIQ+
Sbjct: 155 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKK------------LEHAIAMFQHDSLSIQD 202
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ + VPI +L+ + +H ++RDQFLMKLRPKYE RS+L+NR
Sbjct: 203 YYSAFLTLWHEYADLVTMDVPIAALSTIHTIHATTRRDQFLMKLRPKYEFVRSSLLNRSS 262
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDN--AIAYAAAHWKSKGRDM--RQVQCFSC 176
PSLD+CF ELLREEQRL+TQ IL+Q+ +AYAA + +G M + +QCF
Sbjct: 263 VPSLDICFGELLREEQRLSTQAILEQSHGSSGMATVAYAA---QGRGPPMHSKNLQCFHY 319
Query: 177 KEYRHIVVKCAKKFCNYCKK 196
KEY HI C KKFC+YCKK
Sbjct: 320 KEYGHIAATCPKKFCSYCKK 339
>gi|147788620|emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]
Length = 1034
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 138/224 (61%), Gaps = 33/224 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W+ GSI ++ +L+ H++A+ MW YLKKVY+QDN + LE+ IA +
Sbjct: 91 MSWLFGSIVPLIVTHLRPHRSAQSMWAYLKKVYHQDNDTRCFQLEHAIAMFQH------- 143
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
VPI +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+N+
Sbjct: 144 ------------------DVPIATLSTIQTIHATTRRDQFLMKLRPEYESIRSSLLNKSH 185
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSKGRDM--RQVQCFSC 176
PSLD+CF ELLR+EQRL+TQ IL+Q+ +AYAA + G M + + CF C
Sbjct: 186 VPSLDICFGELLRKEQRLSTQAILEQSHGSSGTTTVAYAA---QGHGPPMHSKNLLCFCC 242
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
KEY HI C KKFC+YCK+ GHIIKEC RPQN Q +QA+ S
Sbjct: 243 KEYGHIAATCPKKFCSYCKQKGHIIKECRIRPQNRQ-TQALQTS 285
>gi|147767344|emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 130/213 (61%), Gaps = 40/213 (18%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ M YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 269 MSWLLGSVEPHIVTHLRPHRSAQSMXAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 328
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 329 YYSAFLTLWHEYADLVTADVPIAALSTIQAIHATTRRDQFLMKLRPEYESVRSSLLNRSX 388
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSLD+CF ELLREEQRL+TQ IL+Q +H S
Sbjct: 389 VPSLDICFGELLREEQRLSTQAILEQ------------SHGSS----------------- 419
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
K GHIIKEC RPQN QA
Sbjct: 420 -----------GXTTKKGHIIKECRIRPQNRQA 441
>gi|147798889|emb|CAN72656.1| hypothetical protein VITISV_039672 [Vitis vinifera]
Length = 518
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 126/216 (58%), Gaps = 25/216 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ L+LNL+ +KT MW YL +YNQDN+A+ LEYE+ ++QG LSI+
Sbjct: 94 MTWILKSVEPHLVLNLRAYKTTAAMWNYLNTIYNQDNSARHFQLEYEMTNFTQGGLSIEE 153
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
YFSGF+ W +Y D++Y VPI +L VQ SN+MN
Sbjct: 154 YFSGFRTRWTDYSDIVYANVPIAALFTVQA----------------------SNMMNHHP 191
Query: 121 SPSLDVCFKELLREEQRLATQTILQQ--NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
SLD C +LLREEQ + TQ ++ N ++AY AA + K RDMR VQCFSCK+
Sbjct: 192 ISSLDACLSKLLREEQHVVTQVTMEHRVNVSVPVSMAY-AAQMRHKSRDMRVVQCFSCKD 250
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
HI KKFCNYCKK GHI+ CP P+ Q +
Sbjct: 251 LGHIARDFPKKFCNYCKKHGHIVSACPIWPKRKQGT 286
>gi|147825408|emb|CAN62271.1| hypothetical protein VITISV_010713 [Vitis vinifera]
Length = 711
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 31/214 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++G ++ ++ +L+LH++A+ MW YLKKVY+QDN A+R LE+ IA + N
Sbjct: 56 MSWLLGLVEPHIVTHLRLHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHTN----- 110
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
VPI L+ +Q +H ++RDQFLMKL P+YE+ S+L+NR
Sbjct: 111 -------------------VPIAVLSTIQTIHATTQRDQFLMKLCPEYESVHSSLLNRST 151
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDN--AIAYAAAHWKSKGRDM--RQVQCFSC 176
LD+ F ELLREEQ L+TQ IL+Q+ +AYAA + +G M + +QCF C
Sbjct: 152 VLCLDIFFGELLREEQCLSTQAILEQSHGSSGTATVAYAA---QRRGPPMHSKNLQCFCC 208
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQN 210
KEY HI C KKFC+Y KK GHIIKEC RPQN
Sbjct: 209 KEYGHIAATCPKKFCSYYKKGGHIIKECRIRPQN 242
>gi|147766152|emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera]
Length = 1023
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 78/147 (53%), Positives = 111/147 (75%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN R LE+ IA + G+L IQ+
Sbjct: 7 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDVCRFRLEHAIAMFQHGSLLIQD 66
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+ F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLRPKYE+ RS+L+NR L
Sbjct: 67 YYLAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRPKYESVRSSLLNRSL 126
Query: 121 SPSLDVCFKELLREEQRLATQTILQQN 147
PS D+CF ELLREEQRL+TQ IL+Q+
Sbjct: 127 VPSFDICFSELLREEQRLSTQAILEQS 153
>gi|147828315|emb|CAN75398.1| hypothetical protein VITISV_004494 [Vitis vinifera]
Length = 236
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 116/164 (70%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ I + G+LSIQ+
Sbjct: 66 MSWLLGSVEPHIVTHLQPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIVMFQHGSLSIQD 125
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 126 YYSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSP 185
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK 164
P LD+CF ELLREEQ L+TQ IL+Q+ A H S+
Sbjct: 186 VPFLDICFGELLREEQCLSTQAILEQSHGSSGTTTVAYCHGLSR 229
>gi|357439341|ref|XP_003589947.1| hypothetical protein MTR_1g042180 [Medicago truncatula]
gi|357439431|ref|XP_003589992.1| hypothetical protein MTR_1g042610 [Medicago truncatula]
gi|355478995|gb|AES60198.1| hypothetical protein MTR_1g042180 [Medicago truncatula]
gi|355479040|gb|AES60243.1| hypothetical protein MTR_1g042610 [Medicago truncatula]
Length = 298
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 124/210 (59%), Gaps = 19/210 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+TWI+ SID +I NL+ TA++MW YL+++YNQDN A LE EI Y Q
Sbjct: 36 ITWILNSIDPQMINNLRSFSTAQEMWTYLERIYNQDNAANHFQLELEIVNYKQ------- 88
Query: 61 YFSGFQNLWAEYVDMIYVQVP-IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
E+ +I+V VP SLADVQEV+ S+RDQFLMKL P++E R L+NR+
Sbjct: 89 ----------EHSTIIHVNVPKAASLADVQEVYNTSRRDQFLMKLHPEFEVVRVALLNRN 138
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYA-AAHWKSKGRDMRQVQCFSCKE 178
PSLD C ELLREEQRL T+ + + + A + KG DMRQVQ F+CK+
Sbjct: 139 SVPSLDTCVGELLREEQRLLTRGTMSCDAFIYEPVPIAYVTQSRGKGCDMRQVQYFTCKQ 198
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
+ + C KF NYCK+ G I +CP RP
Sbjct: 199 FGQVAPNCNIKFYNYCKQKGPFISDCPIRP 228
>gi|147841820|emb|CAN66507.1| hypothetical protein VITISV_034008 [Vitis vinifera]
Length = 1260
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 121/203 (59%), Gaps = 35/203 (17%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W +GS++ ++ +L+ H++A MW YLKK +
Sbjct: 126 MSWRLGSVEPHIVTHLRPHRSAHSMWAYLKK----------------------------D 157
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKL P+YE+ RS+L+NR
Sbjct: 158 YYSAFLTLWHEYADLVTTDVPITTLSTIQTIHATTRRDQFLMKLHPEYESVRSSLLNRSS 217
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDN--AIAYAAAHWKSKGRDM--RQVQCFSC 176
PSLD+CF ELL EEQRL+TQ IL+Q+ +AYAA + +G M + +QCF C
Sbjct: 218 VPSLDICFGELLHEEQRLSTQAILEQSHGSSGTATVAYAA---QGRGPPMHSKNLQCFYC 274
Query: 177 KEYRHIVVKCAKKFCNYCKKPGH 199
KEY HI C KKFC+YCKK H
Sbjct: 275 KEYGHIAATCPKKFCSYCKKKAH 297
>gi|147856733|emb|CAN79183.1| hypothetical protein VITISV_024134 [Vitis vinifera]
Length = 432
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 55/215 (25%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++G ++ ++ +L+LH++A+ M YLKKVY+QDN A+R LE+ IA + +
Sbjct: 66 MSWLIGLVEPHIVTHLRLHRSAQSMXAYLKKVYHQDNDARRFQLEHAIAMFQHAD----- 120
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
VPI +L+ +Q +H ++RDQFLMKLRPKYE+ RS+L+NR L
Sbjct: 121 -------------------VPIAALSIIQTIHATTRRDQFLMKLRPKYESVRSSLLNRSL 161
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDM--RQVQCFSCKE 178
PSLD+CF AYAA + +G M + +QCF KE
Sbjct: 162 IPSLDICF--------------------------AYAA---QGRGPPMHSKNLQCFCYKE 192
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
Y HI KKFC+YCKK HIIKEC RPQNCQA
Sbjct: 193 YGHIAATYPKKFCSYCKKKSHIIKECHIRPQNCQA 227
>gi|147787709|emb|CAN63055.1| hypothetical protein VITISV_034230 [Vitis vinifera]
Length = 546
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 97/128 (75%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++ + MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 80 MSWLLGSVEPHIVTHLRPHRSTQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 139
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H ++RDQFLMKLRP+YE+ RS+L+NR
Sbjct: 140 YYSAFLTLWHEYADLVTTDVPIAALSTIQTIHATTRRDQFLMKLRPEYESVRSSLLNRSP 199
Query: 121 SPSLDVCF 128
PSLD+CF
Sbjct: 200 VPSLDICF 207
>gi|357440373|ref|XP_003590464.1| hypothetical protein MTR_1g063980 [Medicago truncatula]
gi|355479512|gb|AES60715.1| hypothetical protein MTR_1g063980 [Medicago truncatula]
Length = 279
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 109/187 (58%), Gaps = 17/187 (9%)
Query: 22 AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVP 81
A MW YLKKVYNQ+N A+R LE++IA + Q +LSI ++S F NLWAEY +++Y +
Sbjct: 70 AATMWNYLKKVYNQNNAARRFQLEHDIALFKQDSLSISEFYSQFMNLWAEYTEIVYADLT 129
Query: 82 IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQ 141
E L+ VQ VHE +KRDQFLMKLR ++E R C + L ++
Sbjct: 130 SEGLSSVQSVHETTKRDQFLMKLRSEFEGIRP-----------ISCIETLYHHWMHVSMI 178
Query: 142 TILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHII 201
++ +N +AY A K++ DM VQCF CK+ H C K CNYCK+ HI+
Sbjct: 179 YYVK-----NNVLAYVARG-KTRSHDMSAVQCFCCKKLGHYASNCPNKVCNYCKQDKHIL 232
Query: 202 KECPTRP 208
KECP RP
Sbjct: 233 KECPIRP 239
>gi|147767783|emb|CAN60452.1| hypothetical protein VITISV_011348 [Vitis vinifera]
Length = 1074
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/143 (47%), Positives = 100/143 (69%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++ S++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 91 MSWLLSSVEPHIVTHLRPHRSAQFMWAYLKKVYHQDNDARRFQLEHTIAMFQHGSLSIQD 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EY D++ VPI +L+ +Q +H +RDQFLMKLRP+YE+ RS L+NR
Sbjct: 151 YYSAFLTLWHEYSDLVIADVPIVALSTIQTIHTTIRRDQFLMKLRPEYESIRSFLLNRSP 210
Query: 121 SPSLDVCFKELLREEQRLATQTI 143
PSLD+CF + LA +I
Sbjct: 211 VPSLDICFATFATHDSPLAACSI 233
>gi|147837075|emb|CAN63642.1| hypothetical protein VITISV_038695 [Vitis vinifera]
Length = 1069
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 103/147 (70%), Gaps = 12/147 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H +A+ MW YLKK LE+ IA + G+LSIQ+
Sbjct: 57 MSWLLGSMEPHIVTHLRPHHSAQSMWAYLKK------------LEHAIAMFQHGSLSIQD 104
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+ F LW EY D++ VPI++L+ +Q +H ++RDQFLMKLRP+YE+ S+L+NR
Sbjct: 105 YYLAFLTLWHEYADLVTTDVPIDALSTIQTIHATTRRDQFLMKLRPEYESVCSSLLNRSP 164
Query: 121 SPSLDVCFKELLREEQRLATQTILQQN 147
P LD+CF ELLREEQRL+TQ IL+Q+
Sbjct: 165 IPFLDICFGELLREEQRLSTQAILEQS 191
>gi|147773391|emb|CAN60272.1| hypothetical protein VITISV_016416 [Vitis vinifera]
Length = 759
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/125 (50%), Positives = 93/125 (74%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++GSI+ ++ NL+ AK+MWEYL+ +YNQDN A+R LE EIA YSQGNLSI
Sbjct: 524 VSWLLGSIEPHMVNNLRCFTIAKEMWEYLRPIYNQDNNARRFQLELEIANYSQGNLSIDQ 583
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++ GF NLW+EY +++ ++P +L+ +Q+VH +S+RDQFLMKLR ++E R+ L+N D
Sbjct: 584 FYGGFLNLWSEYSSIVHAKIPQAALSALQDVHAESQRDQFLMKLRSEFETTRAGLLNHDP 643
Query: 121 SPSLD 125
SLD
Sbjct: 644 VSSLD 648
>gi|147804662|emb|CAN62381.1| hypothetical protein VITISV_037850 [Vitis vinifera]
Length = 191
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 86/122 (70%), Gaps = 4/122 (3%)
Query: 84 SLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTI 143
SLA VQ VH SKRDQFLMKLRP +E RSN+MNR PSLD C ELLREEQR+ TQ
Sbjct: 66 SLA-VQAVHATSKRDQFLMKLRPDFEIERSNMMNRHPVPSLDACLSELLREEQRIVTQAT 124
Query: 144 LQQ--NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHII 201
++ N +IAY AA ++KGRDMR VQCFSCK++ HI C KKFCNYCKK G +
Sbjct: 125 MEHRANVSAPVSIAY-AAQGRNKGRDMRVVQCFSCKDFGHIARDCPKKFCNYCKKQGSSV 183
Query: 202 KE 203
+E
Sbjct: 184 RE 185
>gi|147853053|emb|CAN82768.1| hypothetical protein VITISV_037881 [Vitis vinifera]
Length = 1650
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 89 QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQ-- 146
+ VH +K+DQFLMKLRP +E SN MNR PSLD C ELLREE R+ TQ ++
Sbjct: 788 RSVHATNKQDQFLMKLRPDFEITWSNTMNRHPVPSLDACLSELLREEHRIVTQATMEHWV 847
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPT 206
N ++AY A ++KGRDMR VQCFSCK++ HI C KKF NY KK GHII C
Sbjct: 848 NVSAPVSMAYVA-QGQNKGRDMRVVQCFSCKDFGHIARDCPKKFYNYYKKQGHIISTCLI 906
Query: 207 RPQNCQASQAV 217
RP+ Q + +
Sbjct: 907 RPEKKQGNHTI 917
>gi|147867278|emb|CAN83290.1| hypothetical protein VITISV_018945 [Vitis vinifera]
Length = 723
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 58/128 (45%), Positives = 90/128 (70%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++ ++ S++ ++ +L H++A+ MW YLKKVY+QDN A+R LE I + G+LSIQ+
Sbjct: 64 ISXLLXSVEPHIVTHLXPHRSAQSMWAYLKKVYHQDNDARRFQLEPAIXMFQHGSLSIQD 123
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y+S F LW EYVD++ VPI L+ +Q +H ++RD+FLMKL +YE+ S+L+N+
Sbjct: 124 YYSAFLTLWHEYVDLVRADVPIVVLSTIQTIHATTRRDRFLMKLHLEYESVHSSLLNKSH 183
Query: 121 SPSLDVCF 128
PSLD+CF
Sbjct: 184 IPSLDICF 191
>gi|147832736|emb|CAN63748.1| hypothetical protein VITISV_009060 [Vitis vinifera]
Length = 1066
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/103 (57%), Positives = 75/103 (72%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ LIL L+ +KTA MW YL VYNQDN A+ LEYE+A ++QG+LSI+
Sbjct: 62 MTWILSSVEPHLILKLRPYKTAAAMWNYLHMVYNQDNFARCFQLEYEMANFTQGSLSIEE 121
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMK 103
YFS FQ LW +Y D+ Y VP+ +L+ VQ VH SKRDQFLMK
Sbjct: 122 YFSCFQTLWTDYSDIXYANVPVATLSTVQAVHATSKRDQFLMK 164
Score = 76.3 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
KGRDM VQCFSCK++ HI C KKFCNYCKK GHII C RP+ Q +
Sbjct: 168 KGRDMWAVQCFSCKDFGHIARDCPKKFCNYCKKQGHIIFACLIRPKRKQGT 218
>gi|147778470|emb|CAN63029.1| hypothetical protein VITISV_014246 [Vitis vinifera]
Length = 1686
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 91 VHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQ--NK 148
+H +KRDQFLMKLRP +E RSN+MN PSLD ELLREEQ + Q ++ N
Sbjct: 1 MHATNKRDQFLMKLRPDFEIERSNMMNCHPVPSLDAYLSELLREEQYIIIQATMEHWANV 60
Query: 149 MHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
+IAYAA +G++ K++ HI C KKFCNYCKK GHII CP R
Sbjct: 61 SAPVSIAYAA-----QGQN---------KDFGHIARDCPKKFCNYCKKQGHIISACPIRL 106
Query: 209 QNCQAS 214
+ Q +
Sbjct: 107 ERKQGT 112
>gi|147768495|emb|CAN76067.1| hypothetical protein VITISV_001726 [Vitis vinifera]
Length = 993
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 58 IQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
++ YFSG Q LW +Y D+++ VP +L+ VQ +H +KRDQFLMKLRP +E A SN+MN
Sbjct: 178 LEEYFSGCQTLWTDYSDIVFANVPTITLSVVQAMHVTNKRDQFLMKLRPNFEIAWSNMMN 237
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAY 156
SLD C EL+ EEQR+ TQ ++ H N AY
Sbjct: 238 CHPVLSLDACSSELMLEEQRIITQATMEH---HANGTAY 273
>gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+TWI ++ S+ L ++TAK++W++L++++ Q N AK+ LE +I Q N+SIQ
Sbjct: 70 ITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLENDIRALHQKNMSIQE 129
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++S +LW + + V +++ E EQ + QFL LR +E R ++++R
Sbjct: 130 FYSAMTDLWDQLA--LTESVELKACGAYIERREQQRLVQFLTALRSDFEGLRGSILHRSP 187
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PS+D ELL EE RL Q+ ++ + + + A SK Q + ++
Sbjct: 188 LPSVDSVVSELLAEEIRL--QSYSEKGILSASNPSVLAV--PSKPFSNHQNKPYT----- 238
Query: 181 HIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
+ C++CK+ GH +CP Q QA
Sbjct: 239 ----RVGFDECSFCKQKGHWKAQCPKLRQQNQA 267
>gi|147845912|emb|CAN82163.1| hypothetical protein VITISV_002378 [Vitis vinifera]
Length = 329
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ L+LNL+L+KT MW YL VYN DN A+ LEYE+ ++QG+L I+
Sbjct: 62 MTWILSSVEPYLVLNLRLYKTVVAMWSYLHTVYNLDNFARCFQLEYEMTNFTQGSLLIEE 121
Query: 61 YFSGFQNLWAEYVDMIY 77
YFS FQ LW +Y D++Y
Sbjct: 122 YFSXFQTLWTDYFDIVY 138
>gi|147790768|emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 21/225 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 75 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPI-ESLADVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + PI E D Q+ + ++ + +FLM L +E R L
Sbjct: 135 DYYDQLRFIW----DQIDLSDPIWECSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 190
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+NR +PSLD EL+REE RLA T+ QNK++ AI + + +Q+ FS
Sbjct: 191 LNRSXAPSLDTAVNELVREEARLA--TLQAQNKLNILAITPSTPLIEQP----QQLGDFS 244
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
R + KKFCNYCK+PGH I+ C R S A VA+
Sbjct: 245 GSNNRR--KQNNKKFCNYCKRPGHTIETCYRR----NKSTATVAN 283
>gi|147791601|emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 75 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + D Q+ + ++ + +FLM L +E R L
Sbjct: 135 DYYDQLRFIW----DQIDLSDPTWGCSTDAQQYATIRDEFRLYEFLMSLHKDFEPIRGQL 190
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+NR +PSLD EL+REE RLA T+ QNK++ AI + + +Q+ FS
Sbjct: 191 LNRSPAPSLDTAVNELVREEARLA--TLXAQNKLNILAITPSTPLIEQP----QQLGDFS 244
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R + KKFCNYCK+PGH I+ C R ++ A
Sbjct: 245 GSSNRR--KQTNKKFCNYCKRPGHTIETCYRRNKSTAA 280
>gi|147785637|emb|CAN77640.1| hypothetical protein VITISV_007622 [Vitis vinifera]
Length = 314
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 91 VHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMH 150
+H ++RDQFLMKLRP+YE+ RS+L+NR PSLD+CF ELLREEQRL+TQ IL+Q+
Sbjct: 234 IHATTRRDQFLMKLRPEYESIRSSLLNRSHVPSLDICFGELLREEQRLSTQAILEQSHGS 293
Query: 151 DNAIAYAAAH 160
A H
Sbjct: 294 SXTXTVAYCH 303
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYN----QDNTAKRSHLEYEIARYSQGNL 56
M+W++GS++ ++ +L+ H++A+ MW YLKK + +D + EYE R S N
Sbjct: 202 MSWLLGSVEPHIVTHLQPHRSAQSMWAYLKKTIHATTRRDQFLMKLRPEYESIRSSLLNR 261
Query: 57 S 57
S
Sbjct: 262 S 262
>gi|147800180|emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]
Length = 1168
Score = 89.7 bits (221), Expect = 8e-16, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ + AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 144 LTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTTHGSLKYQLVVELHQLRQEPGQSIN 203
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E R L
Sbjct: 204 DYYDQLRFIW----DQIDLSDPTWTCSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 259
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+NR +PSLD EL+REE RLA T+ QNK N +A + + + + +
Sbjct: 260 LNRSPAPSLDTTVNELVREEARLA--TLQAQNKF--NVLAITPSTPLIEQQPQQSGDSYG 315
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R + KKFCNYCK+PGH I+ C R ++ A
Sbjct: 316 SSNRRK---QTNKKFCNYCKRPGHTIETCYRRNKSTVA 350
>gi|147770282|emb|CAN65233.1| hypothetical protein VITISV_022975 [Vitis vinifera]
Length = 1277
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 176 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 235
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + D Q+ + ++ + +FLM L +E R L
Sbjct: 236 DYYDQLRFIW----DQIDLSDPTWGCSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 291
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+NR +PSLD EL+R E RLA T+ QNK++ AI + + +Q+ FS
Sbjct: 292 LNRSPAPSLDTAVNELVRXEARLA--TLQAQNKLNILAITPSTPLIEQP----QQLGDFS 345
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
R + KKFCNYCK+PGH I+ C
Sbjct: 346 GSSNRR--KQTNKKFCNYCKRPGHTIETC 372
>gi|147818189|emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]
Length = 776
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++GS++ ++ +L+ H++A+ MW YLKKVY+QDN A+R LE+ IA + G+LSIQ+
Sbjct: 707 MSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQD 766
Query: 61 YFSGFQNLWA 70
Y+S F LWA
Sbjct: 767 YYSAFLTLWA 776
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQ 212
++AYAA ++KGRDM +QCFSCK++ HI C KKFCNYCKK GHII CP RP+ Q
Sbjct: 12 SVAYAA-QGRNKGRDMHVIQCFSCKDFGHIARDCPKKFCNYCKKQGHIISTCPIRPERKQ 70
Query: 213 AS 214
+
Sbjct: 71 GT 72
>gi|147797365|emb|CAN71436.1| hypothetical protein VITISV_039529 [Vitis vinifera]
Length = 1169
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 30 LTWIRNTFIPSISNLLGSFDDAKSAWBMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 89
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + PI + + D Q+ + ++ + +FLM L +E R L
Sbjct: 90 DYYDQLRFIW----DQIDLSDPIWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 145
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+N + +PSLD EL+REE LA T+ QNK++ AI + + +Q FS
Sbjct: 146 LNCNPAPSLDTXVNELVREEAXLA--TLQAQNKLNVLAITPSTPLIEQP----QQFGDFS 199
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R + KKF NYCK+PGH IK C R ++ A
Sbjct: 200 GSSDRR--KQTNKKFYNYCKRPGHTIKTCYRRNKSTAA 235
>gi|147785104|emb|CAN75446.1| hypothetical protein VITISV_030925 [Vitis vinifera]
Length = 749
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQ 212
++AYA ++KGRDM +QCFSCK++ HI C KKFCNYCKK GHII CP RP+ Q
Sbjct: 12 SVAYAX-QGRNKGRDMHVIQCFSCKDFGHIARDCPKKFCNYCKKQGHIISTCPIRPERKQ 70
Query: 213 AS 214
+
Sbjct: 71 GT 72
>gi|147819332|emb|CAN71225.1| hypothetical protein VITISV_006367 [Vitis vinifera]
Length = 998
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTWI+ S++ L+LNL+ +KT MW YL VYNQDN+A+ LEYE+A ++ G+JSI+
Sbjct: 1 MTWILSSVEPHLVLNLRPYKTVAAMWNYLHTVYNQDNSARSFQLEYEMANFTHGSJSIEE 60
Query: 61 YFSG 64
YFSG
Sbjct: 61 YFSG 64
>gi|147815260|emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TWI + S+ + AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 396 LTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTTHGSLKYQLVVELHQLRQEPGQSIN 455
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD-VQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
+Y+ + +W + +D+ Y A + ++ + +FLM L +E R L+NR
Sbjct: 456 DYYDQLRFIWDQ-IDLSYPTWTCSKNAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLLNR 514
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
+PSLD EL+REE RLA T+ QNK + AI + G +
Sbjct: 515 SPAPSLDTAVNELVREEARLA--TLQAQNKFNVLAITPLIEQPQQSG------DSYGSSN 566
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R + KKFCNYCK+PGH I+ C R ++ A
Sbjct: 567 RRK---QTNKKFCNYCKRPGHTIETCYRRNKSTAA 598
>gi|147817650|emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
Length = 1287
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ + AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 47 LTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTTHGSLKYQLVVELHQLRQEPGQSIN 106
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E L
Sbjct: 107 DYYDQLRFIW----DQIDLSDPTWTCSKDAQQYASIRDEFRLYEFLMSLHKDFEPIHGQL 162
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAA-------AHWKSKGRDM 168
+NR +PSLD EL+REE RLA T+ Q K + AI + S G
Sbjct: 163 LNRSPAPSLDTAVNELVREEARLA--TLQAQKKFNVLAITPSTPLIEQPQQSGDSYGSSN 220
Query: 169 RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R+ Q KKFCNYCK+PGH I+ C R ++ A
Sbjct: 221 RRKQ-------------TNKKFCNYCKRPGHTIETCYRRNKSTAA 252
>gi|147802049|emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TWI + S+ + AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 1198 LTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTTHGSLKYQLVVELHQLRQEPGQSIN 1257
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIES-LADVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + L D ++ + ++ + +FLM L +E R L
Sbjct: 1258 DYYDQLRFIW----DQIDLSDPTWTCLKDAKQYASIRDEFRLYEFLMSLHKDFEPIRGQL 1313
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA-------HWKSKGRDM 168
+NR +PSLD EL+REE LA T+ QNK + AI + S G
Sbjct: 1314 LNRSPAPSLDTAVNELVREEAXLA--TLQAQNKFNVLAITPSTPLIEQPQQSGDSYGSSN 1371
Query: 169 RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
R+ Q KKFCNYCK+PGH I+ C R ++ A
Sbjct: 1372 RRKQ-------------TNKKFCNYCKRPGHTIETCYRRNKSTAA 1403
>gi|222623042|gb|EEE57174.1| hypothetical protein OsJ_07110 [Oryza sativa Japonica Group]
Length = 368
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M +I S++ + ++ + H TAK+MW+YLK+ Y Q++ A R L + Q + SI+
Sbjct: 101 MGFIFMSVEVPIRMSFRDHTTAKEMWDYLKQRYTQESGALRFSLLQNLHNLQQQDQSIEE 160
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ----EVHEQSKRD-QFLMKLRPKYEAARSNL 115
+++ F L + + Q P + Q E H+Q QF+M+L ++E+ R L
Sbjct: 161 FYNAFTRLSGQ----LEAQTPKGASGCAQCKAREKHDQENLVYQFVMRLSSQFESIRVQL 216
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ R P++ +L+ EE RL + + N +A + G M + FS
Sbjct: 217 LGRPTRPTMAEALADLIAEETRLCSLDTTPTPVVTHNVMAAP----QRVGAPMGGIPEFS 272
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC----PTRPQNCQASQAVV 218
+ + + C++CKK GHI +C P + + QA +A V
Sbjct: 273 S-------IAKSDRICSHCKKVGHISDDCFYLHPEKLADYQARRAAV 312
>gi|297599407|ref|NP_001047108.2| Os02g0552700 [Oryza sativa Japonica Group]
gi|46389890|dbj|BAD15491.1| unknown protein [Oryza sativa Japonica Group]
gi|215687157|dbj|BAG90927.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255670992|dbj|BAF09022.2| Os02g0552700 [Oryza sativa Japonica Group]
Length = 304
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M +I S++ + ++ + H TAK+MW+YLK+ Y Q++ A R L + Q + SI+
Sbjct: 37 MGFIFMSVEVPIRMSFRDHTTAKEMWDYLKQRYTQESGALRFSLLQNLHNLQQQDQSIEE 96
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ----EVHEQSKRD-QFLMKLRPKYEAARSNL 115
+++ F L + + Q P + Q E H+Q QF+M+L ++E+ R L
Sbjct: 97 FYNAFTRLSGQ----LEAQTPKGASGCAQCKAREKHDQENLVYQFVMRLSSQFESIRVQL 152
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ R P++ +L+ EE RL + + N +A + G M + FS
Sbjct: 153 LGRPTRPTMAEALADLIAEETRLCSLDTTPTPVVTHNVMAAP----QRVGAPMGGIPEFS 208
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC----PTRPQNCQASQAVV 218
+ + + C++CKK GHI +C P + + QA +A V
Sbjct: 209 S-------IAKSDRICSHCKKVGHISDDCFYLHPEKLADYQARRAAV 248
>gi|54290217|dbj|BAD61105.1| unknown protein [Oryza sativa Japonica Group]
gi|125569041|gb|EAZ10556.1| hypothetical protein OsJ_00390 [Oryza sativa Japonica Group]
Length = 337
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M +I S++ + ++ + H TAK+MW+YLK+ Y Q++ A R L + Q + SI+
Sbjct: 70 MGFIFMSVEVPIRMSFRDHSTAKEMWDYLKQRYTQESGALRFSLLQNLHNLQQQDQSIEE 129
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ----EVHEQSKRD-QFLMKLRPKYEAARSNL 115
+++ F L + + Q P + Q E H+Q QF+M+L ++E+ R L
Sbjct: 130 FYNAFTRLSGQ----LEAQTPKGASGCAQCKAREKHDQENLVYQFVMRLSSQFESIRVQL 185
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ R P++ +L+ EE RL + + N +A + G M + FS
Sbjct: 186 LGRPTRPTMAEALADLIAEETRLCSLDTTPTPVVTHNVMAAP----QRVGAPMGGIPEFS 241
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ + + C++CKK GHI +C
Sbjct: 242 S-------IAKSDRICSHCKKVGHISDDC 263
>gi|218187530|gb|EEC69957.1| hypothetical protein OsI_00415 [Oryza sativa Indica Group]
Length = 463
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M +I S++ + ++ + H TAK+MW+YLK+ Y Q++ A R L + Q + SI+
Sbjct: 196 MGFIFMSVEVPIRMSFRDHSTAKEMWDYLKQRYTQESGALRFSLLKNLHNLQQQDQSIEE 255
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ----EVHEQSKRD-QFLMKLRPKYEAARSNL 115
+++ F L + + Q P + Q E H+Q QF+M+L ++E+ R L
Sbjct: 256 FYNAFTRLSGQ----LEAQTPKGASGCAQCKAREKHDQENLVYQFVMRLSSQFESIRVQL 311
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ R P++ +L+ EE RL + + N +A + G M + FS
Sbjct: 312 LGRPTRPTMAEALADLIAEETRLCSLDTTPTPVVTHNVMAAP----QRVGAPMGGIPEFS 367
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ + + C++CKK GHI +C
Sbjct: 368 S-------IAKSDRICSHCKKVGHISNDC 389
>gi|359477310|ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
Length = 1011
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 2 TWIMGSIDQSLILNLKLH-KTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
TW++G+I + I N +H K A+ MW L++ ++ NT + ++E I +QG +I +
Sbjct: 100 TWLLGAISKE-ISNSVIHCKDARTMWLELQERFSHTNTVQLFNIENAIHECAQGTGTITS 158
Query: 61 YFSGFQNLWAEYVDMI-YVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+F+ + LW E + + + A+V+ E K +FLM+L Y RSN++ D
Sbjct: 159 FFTKLKGLWDEKDALCGFPPCTCATAAEVKTYMETQKTMKFLMRLGDNYATVRSNIIGMD 218
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDM------RQVQC 173
P+++ + LR E+ Q K+ A+ A+ + + D R+V+C
Sbjct: 219 PLPTVNKAYAMALRHEK----QAEASNGKV---AVPNEASAFSVRKLDQDPNTTEREVKC 271
Query: 174 FSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQASQA 216
C H C A C YC GH C R Q
Sbjct: 272 EKCNMTNHSTKNCRAHLKCTYCGGKGHTYDYCRRRKNTMGGGQG 315
>gi|357448513|ref|XP_003594532.1| Zinc finger protein GIS2 [Medicago truncatula]
gi|355483580|gb|AES64783.1| Zinc finger protein GIS2 [Medicago truncatula]
Length = 499
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 84 SLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTI 143
SLA + E H Q LM LRP+YEA R++L++R+ PSLD +E++ EE RL
Sbjct: 37 SLAKINEDHLH--LIQVLMTLRPEYEAVRASLLHRNPLPSLDTAIQEIIFEETRLN---- 90
Query: 144 LQQNKMHDNAIAYAA-AHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIK 202
L + D A+A +H K + C +C H+ C C YC GHII+
Sbjct: 91 LDKTPQMDAALATTRFSHQK-----LNHHPCKNCNRTGHVFGNCPTIECRYCHGIGHIIE 145
Query: 203 ECPTRP 208
CPTRP
Sbjct: 146 NCPTRP 151
>gi|147860770|emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]
Length = 1193
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 268 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 327
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ F W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 328 QYYNTFTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 386
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A A + S G D RQ
Sbjct: 387 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALATRSFNSSGGD-RQ--- 439
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 440 -----------KRDRPWCDYCKKPGHYKETC 459
>gi|147788164|emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
Query: 2 TWIMGSIDQSLILNLKLH-KTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
TW++G+I + I N +H K AK MW L++ ++ NT + ++E I +QG ++ +
Sbjct: 100 TWLLGAISKE-ISNSVIHCKDAKTMWLELQERFSHTNTVQLFNIENAIHECAQGTGTVTS 158
Query: 61 YFSGFQNLWAEYVDMI-YVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+F+ + LW E + + + A+V+ E K +FLM L Y RSN++ D
Sbjct: 159 FFTKLKGLWDEKDALCGFPPCTCATAAEVKTYMETQKTMKFLMGLGDNYATVRSNIIGMD 218
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDM------RQVQC 173
P+++ + LR E+ Q K+ A+ A+ + + D R+V+C
Sbjct: 219 PLPTVNKAYAMALRHEK----QAEASNGKV---AVPNEASAFSVRKLDQDPNTTEREVKC 271
Query: 174 FSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQASQA 216
C H C A C YC GH C R Q
Sbjct: 272 EKCNMTNHSTKNCRAHLKCTYCGGKGHTYDYCRRRKNTMGGGQG 315
>gi|147769406|emb|CAN70229.1| hypothetical protein VITISV_024789 [Vitis vinifera]
Length = 1472
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIMEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147854850|emb|CAN78598.1| hypothetical protein VITISV_001332 [Vitis vinifera]
Length = 1701
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 335 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 394
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 395 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 453
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 454 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 506
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 507 -----------KRDRPWCDYCKKPGHYKETC 526
>gi|147862536|emb|CAN81504.1| hypothetical protein VITISV_026577 [Vitis vinifera]
Length = 493
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDATKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147816056|emb|CAN61541.1| hypothetical protein VITISV_025243 [Vitis vinifera]
Length = 641
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 323 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 382
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 383 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 441
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 442 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 494
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 495 -----------KRDRPWCDYCKKPGHYKETC 514
>gi|147820612|emb|CAN72103.1| hypothetical protein VITISV_010290 [Vitis vinifera]
Length = 873
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 390 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 449
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 450 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 508
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 509 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 561
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 562 -----------KRDRPWCDYCKKPGHYKETC 581
>gi|147860087|emb|CAN82928.1| hypothetical protein VITISV_025045 [Vitis vinifera]
Length = 1468
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147784447|emb|CAN63881.1| hypothetical protein VITISV_039357 [Vitis vinifera]
Length = 1611
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 93 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 152
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 153 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 211
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 212 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 264
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 265 -----------KRDRPWCDYCKKPGHYKETC 284
>gi|147795014|emb|CAN76326.1| hypothetical protein VITISV_014220 [Vitis vinifera]
Length = 1112
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 20 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 79
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 80 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 138
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 139 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 191
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 192 -----------KRDRPWCDYCKKPGHYKETC 211
>gi|147859169|emb|CAN83937.1| hypothetical protein VITISV_042335 [Vitis vinifera]
Length = 641
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147858526|emb|CAN81385.1| hypothetical protein VITISV_012324 [Vitis vinifera]
Length = 1369
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147853411|emb|CAN82302.1| hypothetical protein VITISV_013932 [Vitis vinifera]
Length = 461
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVP--IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|147807366|emb|CAN72886.1| hypothetical protein VITISV_019713 [Vitis vinifera]
Length = 1504
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 279 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 338
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 339 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 397
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 398 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 450
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 451 -----------KRDRPWCDYCKKPGHYKETC 470
>gi|147841351|emb|CAN68974.1| hypothetical protein VITISV_002746 [Vitis vinifera]
Length = 852
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 53 QGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQE---VHEQSKRDQFLMKLRPKYE 109
+GNL + F +V YV S+ Q+ + ++ + +FLM L +E
Sbjct: 67 RGNLVAIGARTSFSLPRQRHVSPSYVTTADASVPHAQQYASIXDEFRLYEFLMSLHKDFE 126
Query: 110 AARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR 169
R L+NR PSLD EL+REE RLA T+ QNK++ I + + +
Sbjct: 127 PIRGQLLNRSPXPSLDTAVNELVREEARLA--TLQAQNKLNVLVITPSTPLIEQP----Q 180
Query: 170 QVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
Q+ FS R + KKFCNYCK+PGH I+ C R ++ A
Sbjct: 181 QLGDFSGSGNRR--KQTNKKFCNYCKRPGHTIETCYHRNKSTAA 222
>gi|147783627|emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +++ + + KTA+++W L+ ++Q N ++ IA SQG +++
Sbjct: 372 LSWLTHAVESDIAEGIIHAKTAREVWVDLRDQFSQKNAPAVFQIQKSIATMSQGTMTVAA 431
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVH-EQSKRD---QFLMKLRPKYEAARSNLM 116
YF+ + LW E + + P+ + ++ H EQ + D QFLM L Y+A RSN++
Sbjct: 432 YFTKIKALWDE---LETYRSPLT--CNQRQAHLEQREEDRLMQFLMGLNESYKAVRSNIL 486
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
P++ + +++EE Q + + +IA A KG + RQ C C
Sbjct: 487 MMSPLPNVRQAYSLIVQEEM----QRQVSSEPTENFSIAAAVP---GKGGNPRQKMCDHC 539
Query: 177 KEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
H + +C K C +C K GH C
Sbjct: 540 NRSGHTIDECRTLKFHCKFCDKRGHTEDRC 569
>gi|147859838|emb|CAN81441.1| hypothetical protein VITISV_036851 [Vitis vinifera]
Length = 406
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVP--IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ EE R + ++ +K NA A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRXEESR---KKVMMGSKKQPAPTLNASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKETC 279
>gi|449436018|ref|XP_004135791.1| PREDICTED: uncharacterized protein LOC101211570 [Cucumis sativus]
gi|449442445|ref|XP_004138992.1| PREDICTED: uncharacterized protein LOC101222551 [Cucumis sativus]
gi|449446153|ref|XP_004140836.1| PREDICTED: uncharacterized protein LOC101212068 [Cucumis sativus]
gi|449448868|ref|XP_004142187.1| PREDICTED: uncharacterized protein LOC101221851 [Cucumis sativus]
gi|449448870|ref|XP_004142188.1| PREDICTED: uncharacterized protein LOC101222325 [Cucumis sativus]
gi|449460832|ref|XP_004148148.1| PREDICTED: uncharacterized protein LOC101214339 [Cucumis sativus]
gi|449461011|ref|XP_004148237.1| PREDICTED: uncharacterized protein LOC101217769 [Cucumis sativus]
gi|449463533|ref|XP_004149488.1| PREDICTED: uncharacterized protein LOC101217687 [Cucumis sativus]
gi|449468630|ref|XP_004152024.1| PREDICTED: uncharacterized protein LOC101209650 [Cucumis sativus]
Length = 529
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TW+ + ++ AK +W++L + A L + +Q S+
Sbjct: 70 ITWLGNTSIPAIHAQFDAFDDAKILWDFLSTRFKSIGLAHYYQLHSTLVNLNQDSGQSVN 129
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y + Q +W + A++ + H + + LM LRP+YE+ R+ L++R+
Sbjct: 130 EYLAVLQLIWTQL-----------DQANISKDHL--RLIKVLMGLRPEYESVRAALLHRN 176
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSLD +E+L EE+RL + Q + + A+ + ++ +M C +CK
Sbjct: 177 PLPSLDAAIQEILFEERRLGINSTKQPD------VVLASTYTPNRAANMF---CKNCKLS 227
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
H C K C YC K GHI+ C
Sbjct: 228 GHKFSNCPKIECRYCHKHGHILDNC 252
>gi|449450638|ref|XP_004143069.1| PREDICTED: uncharacterized protein LOC101211757 [Cucumis sativus]
Length = 331
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TW+ + ++ AK +W++L + A L + +Q S+
Sbjct: 70 ITWLGNTSIPAIHAQFDAFDDAKILWDFLSTRFKSIGLAHYYQLHSTLVNLNQDSGQSVN 129
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y + Q +W + A++ + H + + LM LRP+YE+ R+ L++R+
Sbjct: 130 EYLAVLQPIWTQL-----------DQANISKDHLRLIK--VLMGLRPEYESVRAALLHRN 176
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSLD +E+L EE+RL + Q + + A+ + ++ +M C +CK
Sbjct: 177 PLPSLDAAIQEILFEEKRLGINSTKQSD------VVLASTYTPNRAANMF---CKNCKLS 227
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
H C K C YC K GHI+ C
Sbjct: 228 GHKFSNCPKIECRYCHKHGHILDNC 252
>gi|449465198|ref|XP_004150315.1| PREDICTED: uncharacterized protein LOC101213701 [Cucumis sativus]
Length = 306
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TW+ + ++ AK +W++L + A L + +Q S+
Sbjct: 45 ITWLGNTSIPAIHAQFDAFDDAKILWDFLSTRFKSIGLAHYYQLHSTLVNLNQDIGQSVN 104
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y + Q +W + A++ + H + + LM LRP+YE+ R+ L++R+
Sbjct: 105 EYLAVLQPIWTQL-----------DQANISKDHL--RLIKVLMGLRPEYESVRAALLHRN 151
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSLD +E+L EE+RL + Q + + A+ + ++ +M C +CK
Sbjct: 152 PLPSLDAAIQEILFEEKRLGINSTKQSD------VVLASTYTPNRAANMF---CKNCKLS 202
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
H C K C YC K GHI+ C
Sbjct: 203 GHKFSNCPKIECRYCHKHGHILDNC 227
>gi|147773762|emb|CAN60972.1| hypothetical protein VITISV_032051 [Vitis vinifera]
Length = 1446
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG +
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQLVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K + A AA + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDGSALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKEAC 279
>gi|147805337|emb|CAN67449.1| hypothetical protein VITISV_031400 [Vitis vinifera]
Length = 1618
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L +TAKD+W+ K+ Y + +N ++ +E + + QG S+
Sbjct: 290 MSWLINSMNNDIGENFLLFRTAKDIWDVAKETYSSSENISELFQVESALHDFRQGEQSVT 349
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 350 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRKIVEQKRLFKFFLGLNRELDDVRGRIMG 408
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D +
Sbjct: 409 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGDHQ---- 461
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKP H + C
Sbjct: 462 -----------KRDRPWCDYCKKPSHYKEAC 481
>gi|147768800|emb|CAN64765.1| hypothetical protein VITISV_009574 [Vitis vinifera]
Length = 1426
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +N ++ +E + + QG ++
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENXSELFQVESALHDFRQGEQTVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVP--IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W +++D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYW-QHLDLFETHSXKCSDDAATYRKIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKPLPSLRXAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 260 -----------KRDRPWCDYCKKXGHYKETC 279
>gi|147863169|emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
++WI +ID + L + AK +WE+LK+ Y N + L+ IA+ Q ++S+
Sbjct: 88 VSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-----DVQEVH----EQSKRDQFLMKLRPK-YE 109
Y+ LW E ++ P+ S +H EQ K FLM L Y
Sbjct: 148 TYYGKLNVLWEE----LFKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLYA 203
Query: 110 AARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR 169
R+N++++D PSLD ++ ++++++ + + + A + +G+ R
Sbjct: 204 QLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAVRTGAGRGRGKTER 263
Query: 170 QVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
V C CK+ H C + C +C K GH C
Sbjct: 264 PV-CSHCKKTGHETSTCWSLVACPHCHKHGHDKNNC 298
>gi|147855390|emb|CAN79613.1| hypothetical protein VITISV_027440 [Vitis vinifera]
Length = 491
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + L AKD+W+ K+ Y+ +NT++ +E + + QG S+
Sbjct: 20 MSWLINSMNNDIGEXFLLFXXAKDIWDAAKETYSSSENTSELFQVESTLHDFRQGEQSVT 79
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ +Q + +F + L + + R +M
Sbjct: 80 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRKIMKQKRLFKFFLGLNRELDDVRGRIMG 138
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 139 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ--- 191
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 192 -----------KRDRPWCDYCKKPGHYKEAC 211
>gi|111183162|gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+M ++ + L+ + + +W LK+ +++ N + L +I SQG S+ +
Sbjct: 80 LSWLMNTVSEELLSGIVYATNSCSVWNDLKERFDKVNRVRIYQLHRDITTLSQGTDSVSH 139
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVH---EQSKRDQFLMKLRPKYEAARSNLMN 117
YFS + LW EY D+I V P + + +E + EQ + QFL L Y+ AR ++
Sbjct: 140 YFSKLKTLWNEY-DVI-VPSPCSTCSQSKEYNDHLEQMRLIQFLSGLNESYDQARRQILL 197
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ +PS++ + ++ +E +Q + DNA+ ++ S R+ Q +
Sbjct: 198 KGTTPSMNQAYAMIIEDE--------IQHSSCMDNAVEKPSSMVMSVNRN----QGAEKE 245
Query: 178 EYRHIVVKCAKKFCNYCKKPGHIIKEC 204
Y+ K C+YC GH C
Sbjct: 246 HYK-------GKKCDYCHFLGHTKDNC 265
>gi|449484623|ref|XP_004156933.1| PREDICTED: uncharacterized protein LOC101232480 [Cucumis sativus]
Length = 335
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+TW+ + ++ AK +W++L + A L + +Q +
Sbjct: 74 ITWLGNTSIPAIHAQFDAFDDAKKLWDFLSTRFKSIGLAHYYQLHNTLVNLNQ------D 127
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
N+W ++ + + SL + + + LM LRP+YE+ R+ L++R+
Sbjct: 128 IGQSVMNIW-QFFNPFGL-----SLTKRASAKKHLRLIKVLMGLRPEYESVRAALLHRNP 181
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSLD +E+L EE+RL + Q + + A+ + ++ +M C +CK
Sbjct: 182 LPSLDAAIQEILFEEKRLGINSTKQSD------VVLASTYTPNRAANMF---CKNCKLSG 232
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
H C K C YC K GHI+ C
Sbjct: 233 HKFSNCPKIECRYCHKHGHILDNC 256
>gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYF 62
WI SID ++ + AKD+W+ LK+ ++ N ++ L+ EI Q S+ Y+
Sbjct: 82 WIRTSIDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILACKQDGQSVLVYY 141
Query: 63 SGFQNLWAEYVDMIYVQV-PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
LW E + + E+ D+ + E K QFL+ L ++ RS + +D
Sbjct: 142 GRLTKLWEELQNYKTSRTCTCEAAPDIAKEREDDKVHQFLLNLDERFRPIRSTITVQDPL 201
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
P+L+ + ++ EEQ L I ++ + A+ + + QV S +R
Sbjct: 202 PALNQVYSRVIHEEQNLNASRI--KDDIKTEAVGFTVQ--ATPLPPTPQVAAVSAPRFR- 256
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ C + + GH I EC
Sbjct: 257 ---DRSSLTCTHYHRQGHDITEC 276
>gi|215737332|dbj|BAG96261.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635800|gb|EEE65932.1| hypothetical protein OsJ_21799 [Oryza sativa Japonica Group]
Length = 339
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M ++ S + + +N +AK MWEYL++ Y Q + A R L + QG+++I+
Sbjct: 68 MAFLCMSAEVPIRMNFIDLSSAKKMWEYLQQRYQQSSAALRFSLRKSLQSLEQGDMTIEE 127
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ-----EVHEQSKRDQFLMKLRPKYEAARSNL 115
+ + F +L + M VP Q + EQS F+M+LR +E R L
Sbjct: 128 FHNAFTSLSRQLDSM----VPKAGGGCRQCICKEKYEEQSLMFDFVMRLRLDFEPIRVQL 183
Query: 116 MNRDLSPSLDVCFKELLREEQRLAT--------QTILQQNKMHDNAIAYAAAHWKSKGRD 167
+ R P++ +L+ EE RL + T+L + M + A S
Sbjct: 184 LGRSTLPTMAEALADLIAEETRLQSLPNATTPQHTVLASSLMGTSLSGDHAFQHGSLATS 243
Query: 168 MRQVQCFSCKEYRHIVVKCAK 188
Q+ C CK H V KC K
Sbjct: 244 STQIVCSHCKRSGHRVEKCFK 264
>gi|147816112|emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]
Length = 1121
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + L TAKD+W+ K+ Y+ +NT+K +E + + QG ++
Sbjct: 240 MSWLINSMNNDIGEIFLLFGTAKDIWDAAKETYSSSENTSKLFQVESALHDFRQGEQTVT 299
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W +++D+ + A +++ EQ + +F + L + + R +M+
Sbjct: 300 QYYNTLTRYW-QHLDLFETHSWKCSDDAATYRKIVEQKRLFKFFLGLNRELDDVRGRIMD 358
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 359 IKPLPSLREAFSEVRREESR---KKVMMGSKEPPAPTLDASALAARSFNSSGGD-RQ--- 411
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 412 -----------KRDRPWCDYCKKLGHYKETC 431
>gi|147810393|emb|CAN59964.1| hypothetical protein VITISV_022757 [Vitis vinifera]
Length = 1481
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L +TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFRTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A + + EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRXIVEQXRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A + S G D RQ
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASXLXARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 260 -----------KRDRPWCDYCKKXGHYKEAC 279
>gi|359487104|ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
Length = 1624
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNY 61
W++GS+D SLI N TAK +W+ + Y + A + + L +AR QG+ S++ Y
Sbjct: 190 WLIGSMDPSLIGNFIRFPTAKQVWDAIATTYFDGSDATQVYELRRRVARLRQGSGSLEKY 249
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P++ AD+Q + + DQ FL L K + RS+++
Sbjct: 250 YNDLQGLWRE-IDFRRPN-PMQCPADIQHFNNMLQEDQVYTFLDGLDDKLDNIRSDVLQL 307
Query: 119 DLSPSLDVCFKELLREEQR----------------LATQTILQQNKMHDNAIAYAAAHWK 162
P+++ + + RE R +A++++ Q + N+++ K
Sbjct: 308 KPFPTVEQAYAHVCREAVRQAVMTASNGEEAAGAVMASRSLKQGPSIAANSLSLNGKFSK 367
Query: 163 SKGRDMRQVQCFSCKEYRHIVVKCAK 188
+ G ++C C +H C K
Sbjct: 368 TNGPS-NDMKCSHCGNSKHTRDTCFK 392
>gi|147786963|emb|CAN66596.1| hypothetical protein VITISV_019893 [Vitis vinifera]
Length = 1430
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ ++ Y + +N ++ +E + + QG ++
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAEETYSSSENISELFQVESALHDFRQGEHTVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W +++D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYW-QHLDLFETHSWKCSDDAATYRKIVEQKRLFKFFLGLNRELDDVRGXIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 207 IKXLPSLREAFSEVRREESR---KKVMMGSKEQPXPTLDASALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 260 -----------KRDRPWCDYCKKXGHYKETC 279
>gi|147778986|emb|CAN62538.1| hypothetical protein VITISV_031159 [Vitis vinifera]
Length = 1481
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +N ++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENISELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K + A AA + S G D RQ
Sbjct: 207 IKPLPSLREVFSEVRREESR---KKVMMGSKEQPAPTLDGSALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+Y KKPGH + C
Sbjct: 260 -----------KRDRPWCDYYKKPGHYKEAC 279
>gi|9954746|gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +ID+++ ++ + ++W +++K + N + L+ E+A Q ++I+
Sbjct: 92 VSWMKLTIDETVSTSMSHLDDSHELWTHIQKRFGVKNGQRVQRLKTELATCRQKGVAIET 151
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPK-YEAARSNLMNRD 119
Y+ LW D Y Q +++ DV++ E+ K QFLM L Y A +S L++R
Sbjct: 152 YYGRLSQLWRSLAD--YQQA--KTMDDVRKEREEDKLHQFLMGLDESVYGAVKSALLSRV 207
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ-CFSCKE 178
PSL+ + L ++E+ ++++ + + + +++ A S+ RD + + C +C
Sbjct: 208 PLPSLEEAYNALTQDEE---SKSLSRLHNERVDGVSF-AVQTTSRPRDSSENRVCSNCGR 263
Query: 179 YRHIVVKCAK 188
H+ +C K
Sbjct: 264 VGHLAEQCFK 273
>gi|147792850|emb|CAN68802.1| hypothetical protein VITISV_008809 [Vitis vinifera]
Length = 1397
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y+ +N ++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIXENFLLFGTAKDIWDAAKETYSSXENISELFQVESALHDFXQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
SL F E+ EE R + ++ +K + A AA + S G D RQ
Sbjct: 207 IKPLXSLREAFSEVRXEESR---KKVMMGSKEQPAPTLDGSALAARSFNSSGGD-RQ--- 259
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 260 -----------KRDRPWCDYCKKPGHYKEAC 279
>gi|147785635|emb|CAN77638.1| hypothetical protein VITISV_007620 [Vitis vinifera]
Length = 705
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 32/45 (71%)
Query: 169 RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQA 213
+ +QCF KEY HI C KKFC+YCK+ GHIIKEC PQN QA
Sbjct: 4 KNLQCFCYKEYGHIAATCPKKFCSYCKRKGHIIKECHICPQNRQA 48
>gi|359485412|ref|XP_003633269.1| PREDICTED: uncharacterized protein LOC100854802 [Vitis vinifera]
Length = 437
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 49/222 (22%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 1 MSWLVNSMTADIGENFLSFDTAKEIWDIAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 60
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHE--------------QSKRD-QFLMKL 104
YF+ LW + D EVH Q KR +FL+ L
Sbjct: 61 EYFNTLTRLWRQL--------------DTFEVHNWNCVTNGFLYKKIVQGKRVFKFLLGL 106
Query: 105 RPKYEAARSNLMNRDLSPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWK 162
+ R +M PSL F E+ REE R L + Q N ++A+ A +
Sbjct: 107 NKNLDEIRGRIMGVKPLPSLREAFSEVRREESRKNLMMGSHQQLNMAENSALKTQFAPF- 165
Query: 163 SKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
D RQ +K + +C++C+KPGH + C
Sbjct: 166 ----DNRQ------------KIKGGRPWCDHCRKPGHSRETC 191
>gi|147801255|emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQN 60
+WI +ID + L + AK +WE+LK+ Y N + L+ IA+ Q ++S+
Sbjct: 88 SWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQPKSMSVTT 147
Query: 61 YFSGFQNLWAE-YVDMIYVQVPIESLADVQEVH----EQSKRDQFLMKLRPK-YEAARSN 114
Y+ LW E + + + S +H EQ K FLM L Y R+N
Sbjct: 148 YYGKLNVLWEELFKNEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLYAQLRTN 207
Query: 115 LMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCF 174
++++D PSLD ++ ++++E+ + + + + +G+ R V C
Sbjct: 208 ILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFXVRTGAGRGRGKTERPV-CS 266
Query: 175 SCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
K+ H C + C +C K GH C
Sbjct: 267 HXKKTGHETSTCWSXVACPHCHKHGHDKNNC 297
>gi|359493621|ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 1452
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 75 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPI-ESLADVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + PI E D Q+ + ++ + +FLM L +E R L
Sbjct: 135 DYYDQLRFIW----DQIDLSDPIWECSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 190
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIA 155
+NR +PSLD EL+REE RLA T+ QNK++ AI
Sbjct: 191 LNRSPAPSLDTAVNELVREEARLA--TLQAQNKLNILAIT 228
>gi|147801115|emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
Length = 1576
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 209 MSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 268
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 269 EYFNTLTRLWXQ-LDTFEVH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 326
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ + N +A + D RQ
Sbjct: 327 GVKPLPSLREAFSEVRREESR---KNLMMGSHQQLNMAESSALKTQFAPFDNRQ------ 377
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KPGH + C
Sbjct: 378 ------KIKGGRPWCDHCRKPGHSRETC 399
>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
Length = 2816
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 2141 MSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 2200
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 2201 EYFNTLTRLWRQ-LDTFEVH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 2258
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ + N +A + D RQ
Sbjct: 2259 GVKPLPSLREAFSEVRREESR---KNLMMGSHQQLNMAESSALKTQFAPFDNRQ------ 2309
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KPGH + C
Sbjct: 2310 ------KIKGGRPWCDHCRKPGHSRETC 2331
>gi|10177558|dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +I +SL ++ + DMW +++K + N + L+ E+A Q I+
Sbjct: 91 VSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQKGTPIET 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKL-RPKYEAARSNLMNRD 119
Y+ LW D Y Q +++ +V++ E+ K QFLM L Y A +S L++R
Sbjct: 151 YYGKLSQLWRSLAD--YQQA--KTMEEVRKEREEDKLHQFLMGLDESMYGAVKSALLSRV 206
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQ---NKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL+ + L ++E+ + + + KM NA + + S GR V S
Sbjct: 207 PLPSLEEAYNTLTQDEESKSLSRLHDERNDEKMRRNATSSSRNQSASMGRGSSVVPATSF 266
Query: 177 K 177
K
Sbjct: 267 K 267
>gi|147856198|emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
Length = 1387
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNY 61
W++GS+D SLI N TAK +W+ + Y + A + + L +AR QG+ S++ Y
Sbjct: 106 WLIGSMDPSLIGNFIRFPTAKQVWDAIATTYFDGSDATQVYELRRRVARLRQGSGSLEKY 165
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P++ AD+Q + + D+ FL L K + RS+++
Sbjct: 166 YNDLQGLWRE-IDFRRPN-PMQCPADIQHFNNMLQEDRVYTFLDGLDDKLDNIRSDVLQL 223
Query: 119 DLSPSLDVCFKELLREEQR----------------LATQTILQQNKMHDNAIAYAAAHWK 162
P+++ + + RE R +A++++ Q N+++ K
Sbjct: 224 KPFPTVEQAYAHVRREAVRQAVMTANNGEEAAGAVMASRSLKQGLSTAVNSLSLNGKFSK 283
Query: 163 SKGRDMRQVQCFSCKEYRHIVVKCAK 188
S G ++C C +H C K
Sbjct: 284 SNGPS-NDMKCSHCGNSKHTRDTCFK 308
>gi|147789799|emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]
Length = 1174
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 95 SKRDQF-----LMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKM 149
+KRD+F LM L +E R L+N +PSLD EL+REE LA T+ QNK+
Sbjct: 59 AKRDEFRLYEFLMSLHKDFEPIRGQLLNSSPAPSLDTDVNELVREEAHLA--TLQAQNKL 116
Query: 150 HDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQ 209
+ AI + + + + F R + KKFCNYCK PGH I+ C R +
Sbjct: 117 NVLAITPSTPLIE---QPQQSGDFFGSSNRRK---QTNKKFCNYCKCPGHTIETCYRRNE 170
Query: 210 NCQA 213
+ A
Sbjct: 171 STTA 174
>gi|147795051|emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera]
Length = 1893
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 45/209 (21%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +N +K +E + + QG ++
Sbjct: 667 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENISKLFQVESALHDFRQGEQTVT 726
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ +++ EQ + +F + L + + R +M
Sbjct: 727 QYYNTL----------------------TRKIVEQKRLFKFFLGLNRELDDVRGRIMGIK 764
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQCFS 175
PSL F E+ REE R + ++ +K + A AA + S G D RQ
Sbjct: 765 PLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDXSALAARSFNSSGGD-RQ----- 815
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 816 ---------KRDRPWCDYCKKPGHYKETC 835
>gi|2244802|emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
TW+M S+D+ + +L T + +W L + QD+ + +E ++++ QG++ I Y
Sbjct: 103 TWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTY 162
Query: 62 FSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
++ LW E+ + YV++P+ ++ + + ++S+ +FL +L ++ R
Sbjct: 163 YTALLTLWEEHRN--YVELPVCTCGRCECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRR 220
Query: 114 NLMNRDLSPSLDVCFKELLREEQ--------RLATQTILQQNKMHDNAIAYAAAHWKSKG 165
+++ P++ F + ++E+ R+ + + ++++ AY AA+
Sbjct: 221 HILMLKPIPTIKEAFNMVTQDERQRNVKPLTRVDSVAFQNTSMINEDENAYVAAY----- 275
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ V K C +C K GH I++C
Sbjct: 276 ---------------NTVRPNQKPICTHCGKVGHTIQKC 299
>gi|147779587|emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
++WI +ID + L + AK +WE+LK+ Y N + L+ IA+ Q ++S+
Sbjct: 3 VSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMSVT 62
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-----DVQEVH----EQSKRDQFLMKLRPK-YE 109
Y+ LW E ++ P+ S +H EQ K FLM L Y
Sbjct: 63 TYYGKLNVLWEE----LFKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLYA 118
Query: 110 AARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR 169
+N++++D PSLD ++ ++++E+ + + + A +G+ R
Sbjct: 119 QLXTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFAVRTGVGXGRGKTER 178
Query: 170 QVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
V C K+ H C + C +C K GH C
Sbjct: 179 LV-CXHXKKTGHETSTCWSXVACPHCHKHGHDKNNC 213
>gi|147773688|emb|CAN74194.1| hypothetical protein VITISV_040578 [Vitis vinifera]
Length = 1353
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N + TAK++W+ ++ Y N DNT+ ++ + QG+ ++
Sbjct: 89 MSWLINSMTNDIGENFMYYGTAKEIWDAARETYSNIDNTSAIFEIKSILQDLRQGDSTVT 148
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ W + Y ++++ + P + L ++V E+ + +FL+ L + R ++
Sbjct: 149 EYFNILTRYWQQLDIYEELVW-KCPEDGLL-YKKVIEKERIYKFLLGLNKNLDEVRGRVL 206
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+ PS+ F E+ REE R Q + + A A +S +
Sbjct: 207 SIKPLPSVREVFSEIRREESRQKVMLGTQNSSKNLENSALVARGTQSNNNXHQ------- 259
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC-----------PTRPQNCQASQA 216
K + +C++C+KPGH + C P+RPQ + +A
Sbjct: 260 -------TKKNRPWCDHCRKPGHTKETCWHLHGKPADWKPSRPQQNKEGRA 303
>gi|147795320|emb|CAN67245.1| hypothetical protein VITISV_008680 [Vitis vinifera]
Length = 1333
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W K+ + +++NT++ +E + QGNL +
Sbjct: 396 MSWLVNSMTADIGENFLSFDTAKEIWNTAKETFSDKENTSEIIQIEGILHDLRQGNLMVT 455
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 456 EYFNTLTRLWRQ-LDTFEVH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 513
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ + N +A + D RQ
Sbjct: 514 GVKPLPSLREAFSEVRREESR---KNLMMGSHQQLNMAESSALKTQFAPFDNRQK----- 565
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KPGH + C
Sbjct: 566 -------IKGGRPWCDHCRKPGHSRETC 586
>gi|147804937|emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ +++ + ++ + TA ++WE L + ++Q N + ++ EIA + Q LSI Y
Sbjct: 112 SWIVNTLNPEISDSVIYYATAHEVWEDLCERFSQSNAPRIFEIQREIAYHRQEQLSISVY 171
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD-----QFLMKLRPKYEAARSNLM 116
++ ++LW E LA + +++D QFLM L Y A R ++
Sbjct: 172 YTKLKSLWDE-------------LASYNDASSGAQQDQQRLMQFLMGLNESYSAIRGQIL 218
Query: 117 NRDLSPSLDVCFKELLREE-QRL--ATQTI----------LQQNKMHDNAIAYAAAHWKS 163
+ PS+ + + +EE QRL AT T ++ N+M +N+ A +
Sbjct: 219 LMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKNNSAGNARSDRSD 278
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ + Q ++ R + C YC + GH +++C
Sbjct: 279 RFYNSSQDSRRFDQDKRRSGSSKGRPQCTYCGEMGHFVEKC 319
>gi|147787640|emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+M SI + + +L A D+WE LK Y + + + LE ++ SQ + SI
Sbjct: 54 LSWLMNSIAKEIRGSLLYFTNAFDIWEELKIRYLRSDGPRVFSLEKSLSSISQNSKSITE 113
Query: 61 YFSGFQNLWAEYVDMIYVQVP-----------IESLADVQEVHEQSKRDQFLMKLRPKYE 109
YFS F+ LW EY+ Y +P L D+ + + + +FLM L Y
Sbjct: 114 YFSEFKALWDEYIS--YHPIPSCRCGNLNRCSCNILKDLTDRQQSNYVMKFLMGLHDSYS 171
Query: 110 AARSNLMNRDLSPSLDVCFKELLREE-QRLATQTI 143
A RS L+ + S+ F LL+EE QR T +
Sbjct: 172 AIRSQLLPQSPLLSMSRVFSLLLQEESQRSLTNAV 206
>gi|284434481|gb|ADB85253.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 861
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D S+ ++ + + +W+YL++ Y Q + A+ L+ E+ Q + S+ ++F
Sbjct: 46 SVDDSIQPDIVGLRATRQIWQYLRERYQQSSDAQFFSLQRELETLHQEDSSVDDFFQALT 105
Query: 67 NLWAEYVDMIYVQVPIESLAD--VQEVHEQSKRDQ-------FLMKLRPKYEAARSNLMN 117
+LW + ++ LA QE HE K D F+ +LRP++E R+ L++
Sbjct: 106 SLWRQ----------LDELASPLCQECHEVQKADHDRLRLYDFVCRLRPEFEPVRAQLLS 155
Query: 118 RDLSPSLDVCFKELLREEQR--LATQTIL 144
R P++ L EE R LA Q +L
Sbjct: 156 RSPRPTVTETLSTLRAEELRRGLAAQFVL 184
>gi|296084335|emb|CBI24723.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W K+ + +++NT++ +E + QGNL +
Sbjct: 94 MSWLVNSMTADIGENFLSFDTAKEIWNTAKETFSDKENTSEIIQIEGILHDLRQGNLMVT 153
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 154 EYFNTLTRLWRQ-LDTFEVHN-WNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 211
Query: 117 NRDLSPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCF 174
PSL F E+ REE R L + Q N +A+ A + D RQ
Sbjct: 212 GVKPLPSLREAFSEVRREESRKNLMMGSHQQLNMAESSALKTQFAPF-----DNRQK--- 263
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KPGH + C
Sbjct: 264 ---------IKGGRPWCDHCRKPGHSRETC 284
>gi|357515301|ref|XP_003627939.1| Flavonol sulfotransferase-like protein [Medicago truncatula]
gi|355521961|gb|AET02415.1| Flavonol sulfotransferase-like protein [Medicago truncatula]
Length = 640
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W+ S+D + ++ TA ++W LK+ + Q + + S L+ EI QG SI +
Sbjct: 80 MSWLSNSVDPQISQSILWMDTALEIWNELKERFYQGDIFRISDLQEEIYTLKQGESSISS 139
Query: 61 YFSGFQNLWAEYVDMIYVQVP-----IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNL 115
Y++ + LW E ++ + +++A ++E + + +FL L ++ A RS +
Sbjct: 140 YYTKMKKLWQELDNVRPIPTSNCVDDCKAIAKMREYKDSDQVIRFLKGLNEQFSAVRSQI 199
Query: 116 MNRDLSPSLDVCFKELLREEQRLA-----TQTILQQNKMHDNAIAYAAAHW--------- 161
M D PS+ + L+++E+++ ++ + N +Y H
Sbjct: 200 MLMDPLPSIGKVYYLLVQQERQVVIPLDESKLLAVSNNSFSGHSSYGRGHMNASRGSGDR 259
Query: 162 ---KSKGRDMRQVQCFSCKEYRHIVVKCAKKF 190
S GR C C + H V C KK+
Sbjct: 260 GGRSSYGRGKGIRACSFCGKSNHTVDTCFKKY 291
>gi|147818359|emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]
Length = 1394
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 85 MSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 144
Query: 60 NYFSGFQNLWAEYVDMIYVQ---VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V I+S +++ E + +FL+ L + R +M
Sbjct: 145 EYFNTLTRLWRQ-LDTFEVHNWNCVIDSFL-YKKIVEGKRVFKFLLGLNKNLDEIRGRIM 202
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ + N + + D RQ
Sbjct: 203 GVKPLPSLREAFSEVRREESR---KNLMMGSHQQLNMAESSXLKTQFAPFDNRQ------ 253
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++CKK GH + C
Sbjct: 254 ------KIKGGRPWCDHCKKXGHSRETC 275
>gi|147784171|emb|CAN61815.1| hypothetical protein VITISV_009920 [Vitis vinifera]
Length = 1064
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L ++ + Q SI
Sbjct: 3 LTWIRNTSIPSISNLLGNFDNAKSTWDMLAKRYSTTHGSMKYQLMVKLHQLRQKPGQSIN 62
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQEVHEQSKRDQF-----LMKLRPKYEAARS 113
+Y+ + +W D I + P + + D Q+ S RD+F LM L +E+ R
Sbjct: 63 DYYDQLRFIW----DQIDLSDPTWACSKDAQQY--ASIRDEFCLYEFLMSLHKDFESIRG 116
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAI 154
L+NR +PSLD EL++EE RLA T+ QNK++ AI
Sbjct: 117 QLLNRSPAPSLDTAVNELVKEEARLA--TLQAQNKLNVLAI 155
>gi|147819068|emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]
Length = 1002
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++ S+ + + +L T ++W L+ + Q N L ++ QG L I
Sbjct: 3 ISWLLNSVSREIADSLMYIATTSEIWMDLRDQFRQSNAHWIFQLRKQLIALQQGGLDINT 62
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQ---EVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ F+ LW E + + +P +Q E +Q QFLM L Y RS ++
Sbjct: 63 YYTRFKVLWEELKN--FQPLPACHCGGMQAWVEYQQQEHVIQFLMGLNDSYSQTRSQILM 120
Query: 118 RDLSPSLDVCFKELLREE-QRLATQ---TILQQNKMHDNAIAYAAAHWKSKGR--DMRQV 171
+ P L F +L+EE QR Q ++LQ + D++ A A H S +
Sbjct: 121 MEPIPPLAKVFALVLQEERQRSINQGFSSLLQPLALGDSSQASANTHIGSSASKPKFERP 180
Query: 172 QCFSCKEYRHIVVKCAK 188
QC C H + +C K
Sbjct: 181 QCTHCGLQGHAMDRCYK 197
>gi|356566454|ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
Length = 1750
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S++ S+ ++ A D+W LK+ ++Q + + S ++ EI +QG S+ +
Sbjct: 90 SWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYALTQGTRSVTTF 149
Query: 62 FSGFQNLWAEYVDMIYVQVP---------IESLADVQEVHEQSKRDQFLMKLRPKYEAAR 112
+S + LW E IY+ +P +++ + H +FL L ++ A +
Sbjct: 150 YSDLKALWEEL--EIYMPIPNCTCHHRCSCDAMRLARRHHHTLHVMRFLTGLNDEFNAVK 207
Query: 113 SNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ 172
S ++ + PS+ F +++ E++ + D+ A+ KS+G +
Sbjct: 208 SQILLIEPLPSITKIFSMVIQFERQNCVPN------LDDSKALVNASTSKSQGSANGRSN 261
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
S K++C YC K H ++ C
Sbjct: 262 SGS------------KRYCTYCHKTNHFVENC 281
>gi|356577871|ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
Length = 2219
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S++ S+ ++ A D+W LK+ ++Q + + S ++ EI +QG S+ +
Sbjct: 283 SWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYALTQGTRSVTTF 342
Query: 62 FSGFQNLWAEYVDMIYVQVP---------IESLADVQEVHEQSKRDQFLMKLRPKYEAAR 112
+S + LW E IY+ +P +++ + H +FL L ++ A +
Sbjct: 343 YSDLKALWEEL--EIYMPIPNCTCHHRCSCDAMRLARRHHHTLHVMRFLTGLNDEFNAVK 400
Query: 113 SNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ 172
S ++ + PS+ F +++ E++ + D+ A+ KS+G +
Sbjct: 401 SQILLIEPLPSITKIFSMVIQFERQNCVPN------LDDSKALVNASTSKSQGSANGRSN 454
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
S K++C YC K H ++ C
Sbjct: 455 SGS------------KRYCTYCHKTNHFVENC 474
>gi|124359649|gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 772
Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + + H+ A D+W L++ +++ + + + L I QG+ S+ +
Sbjct: 86 LSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQGDKSVLD 145
Query: 61 YFSGFQNLWAEY-----VDMIYVQVP--IESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
YF+ ++LW E + M P ES+ ++ + + QFL L + ++
Sbjct: 146 YFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLNDSFSVVKT 205
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKS---KGRDMRQ 170
++ D PS++ + +++EE + T L N+ D++I A+ + +G+
Sbjct: 206 QVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNE--DSSILVNASDARKPFLRGKSSGT 263
Query: 171 VQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
Q K ++C +C++ H ++ C
Sbjct: 264 SQS-----------KNNSRYCTFCRRNNHTVEYC 286
>gi|7267643|emb|CAB78071.1| putative protein [Arabidopsis thaliana]
Length = 290
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
TW+M S+ + + +L TA+ +W+ L + QD+ + +E + QG++ + Y
Sbjct: 84 TWLMNSVSKKIGQSLLFMSTAESIWKNLLSRFKQDDAPRVFEIEQRLGSLQQGSMDVSTY 143
Query: 62 FSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
++ LW EY + Y+++P+ + A +++ ++S+ +FLM L YEA +
Sbjct: 144 YTELVTLWEEYKN--YIELPLCTCGRCECNASALWEKMQQRSRVTKFLMGLNEAYEATQR 201
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAH 160
+++ P+++ F + ++E++ + + + + DN +++H
Sbjct: 202 HILMLKPIPTIEDVFNMVAQDERQKSIKPVAKM----DNVAFQSSSH 244
>gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera]
Length = 758
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 42/209 (20%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y+ +NT++ +E + + QG ++
Sbjct: 307 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSFENTSELFQVESALHDFRQGEQTVT 366
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ +++QE + Q + L + + RS +M
Sbjct: 367 QYYNTLT-------------------SNIQENCGTKETVQVFLGLNRELDDVRSRIMGIK 407
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQCFS 175
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 408 PLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ----- 458
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 459 ---------KRDRPWCDYCKKLGHYKETC 478
>gi|449472385|ref|XP_004153578.1| PREDICTED: uncharacterized protein LOC101215164, partial [Cucumis
sativus]
Length = 403
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ SI + + NL + K++W+ LK+ Y Q N L ++ +QG+LS++ Y
Sbjct: 98 SWIINSISKEIAANLVYNGNVKEIWDELKERYKQSNGPHIYQLRKDLVTTTQGSLSVEIY 157
Query: 62 FSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++ +W E V+ + + E + + FLM L Y R+ ++ D
Sbjct: 158 YAKITTIWQELVEYRPMDECTCEGSKKMIDFLNAEFVMIFLMGLNESYSQIRAQILLIDP 217
Query: 121 SPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P ++ F +++EE++ + + ++ + N+ ++ KSK +D R + C +C
Sbjct: 218 LPPINRVFSLIIQEERQRSIGSSPSIESITLMANSERRFSSD-KSKKKDTRPI-CSNCGY 275
Query: 179 YRHIVVKCAKKFCNYCKKPGH 199
H KC K + PGH
Sbjct: 276 KGHTADKCYKL---HGYPPGH 293
>gi|9758329|dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 370
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ WI SI+ + + A +W+ L++ ++ N + ++ ++A Q ++ +
Sbjct: 97 VGWIRVSIEPKVKSTVTFISDAHLLWDELRQRFSVTNNVRVHQIKAQLASCRQEGQTVID 156
Query: 61 YFSGFQNLWAEYVDMIYVQV-PIES-LADVQEVHEQSKRDQFLMKL-RPKYEAARSNLMN 117
Y+ NLW E + V P S L + + + K QF++ L ++ +NL+N
Sbjct: 157 YYGRLCNLWDELKNYQASAVCPHGSVLTAIVKERDDEKLHQFVLGLDSARFSGLCTNLIN 216
Query: 118 RDLSPSLDVCFKELLREEQRL-ATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
D PSL V + +++REEQR+ A++T Q+ ++ + + A H +S + +
Sbjct: 217 MDPLPSLGVAYSQVIREEQRIHASRTQEQRQEV----VGFVARHEQSSA-----MSSPAQ 267
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+VK C++C + GH K+C
Sbjct: 268 SSIESSIVKSRPVLCSHCGRTGHEKKDC 295
>gi|449447317|ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
gi|449449869|ref|XP_004142687.1| PREDICTED: uncharacterized protein LOC101213831 [Cucumis sativus]
Length = 440
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ SI + + +L + K+MW+ LK+ Y Q N L ++ +QG+LS++ Y
Sbjct: 39 SWIINSISKEIAASLVYNGNVKEMWDELKERYKQSNGPHIYQLRKDLVTTTQGSLSVEIY 98
Query: 62 FSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++ +W E V+ + + E + + FLM L Y R+ ++ D
Sbjct: 99 YAKITTIWQELVEYRPMDECTCEGSKKMIDFLNAEFVMTFLMGLNESYSQIRAQILLIDP 158
Query: 121 SPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P ++ F +++EE++ + + ++ + N+ ++ KSK +D R + C +C
Sbjct: 159 LPPINRVFSLIIQEERQRSIGSSPSIESIALMANSERRFSSD-KSKKKDTRPI-CSNCGY 216
Query: 179 YRHIVVKCAKKFCNYCKKPGH 199
H KC K + PGH
Sbjct: 217 KGHTADKCYKL---HGYPPGH 234
>gi|147816075|emb|CAN66087.1| hypothetical protein VITISV_044185 [Vitis vinifera]
Length = 878
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 257 MSWLVNSMTADIGENFLSFDTAKEIWDIAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 316
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 317 KYFNILTRLWRQ-LDTFEVH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 374
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE + + ++ + N A + D RQ
Sbjct: 375 GVKPLPSLREAFSEVRREE---SPKNLMMGSHQQLNMAESLALKTQFAPFDNRQK----- 426
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KPGH + C
Sbjct: 427 -------IKGGRPWCDHCRKPGHSRETC 447
>gi|50253554|gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]
Length = 348
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +I +SL ++ + DMW +++K + N + L+ E+A Q I+
Sbjct: 91 VSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQKGTPIET 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKL-RPKYEAARSNLMNRD 119
Y+ LW D Y Q +++ +V++ E+ K QFLM L Y A +S L++R
Sbjct: 151 YYGKLSQLWRSLAD--YQQA--KTMEEVRKEREEDKLHQFLMGLDESMYGAVKSALLSRV 206
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSL+ + L ++E+ ++++ + + ++ +++A + + + + +
Sbjct: 207 PLPSLEEAYNTLTQDEE---SKSLSRLHDERNDGVSFAV-------QTTPRTRSLTKNKD 256
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
IV C++C + GH+ + C
Sbjct: 257 SAIV-------CSHCGRLGHLAENC 274
>gi|125525618|gb|EAY73732.1| hypothetical protein OsI_01607 [Oryza sativa Indica Group]
Length = 217
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M I+ S+ SLI++L +TAK +W LK+ Y QD+ A L + Q ++SI
Sbjct: 74 MAAIVNSVKHSLIVSLSKFQTAKAIWGSLKQRYVQDSGALLHTLMQQTHAIEQNDMSIDE 133
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLA--DVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y+S F L M VP + A + E+ +F+M +R +++ R+ L++
Sbjct: 134 YYSAFDRLMGSLTSM----VPACTTAACPAHQFLEKFLTYRFVMGVREDFDSIRTRLLHS 189
Query: 119 DLSPSLDVCFKELLREEQRL 138
+ ++ + +LL EE RL
Sbjct: 190 SSTLTMALALSDLLAEETRL 209
>gi|52075807|dbj|BAD45287.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 144
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M I+ S+ SLI++L +TAK +W LK+ Y QD+ A L + Q ++SI
Sbjct: 1 MAAIVNSVKHSLIVSLSKFQTAKAIWGSLKQRYVQDSGALLHTLMQQTHAIEQNDMSIDE 60
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLA--DVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y+S F L M VP + A + E+ +F+M +R +++ R+ L++
Sbjct: 61 YYSAFDRLMGSLTSM----VPACTTAACPAHQFLEKFLTYRFVMGVREDFDSIRTRLLHS 116
Query: 119 DLSPSLDVCFKELLREEQRL 138
+ ++ + +LL EE RL
Sbjct: 117 SSTLTMALALSDLLAEETRL 136
>gi|147771338|emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera]
Length = 1377
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 85 MSWLVNSMTTDIGENFLSFDTAKEIWDIAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 144
Query: 60 NYFSGFQNLWAEYVDMIYVQ---VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + L +++ E + +FL+ L + + +M
Sbjct: 145 EYFNTLTRLWHQ-LDTFEVHNWNCVTDGLL-YKKIVEGKRVFKFLLGLNKNLDEIKGRIM 202
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ + N +A + D RQ
Sbjct: 203 GVKPLPSLREAFSEVRREESR---KNLMMGSHQQLNMAESSALKTQFAPFDNRQ------ 253
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+KP H + C
Sbjct: 254 ------KIKGGRPWCDHCRKPRHSRETC 275
>gi|449463807|ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ SI + + +L + K++W+ LK+ Y Q N L ++ +QG+LS++ Y
Sbjct: 1383 SWIINSISKEIAASLVYNGNVKEIWDELKERYKQSNGPHIYQLRKDLVTTTQGSLSVEIY 1442
Query: 62 FSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++ +W E V+ + + E + + FLM L Y R+ ++ D
Sbjct: 1443 YAKITTIWQELVEYRPMDECTCEGSKKMIDFLNAEFVMIFLMGLNESYSQIRAQILLIDP 1502
Query: 121 SPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P ++ F +++EE++ + + ++ + N+ ++ KSK +D R + C +C
Sbjct: 1503 LPPINRVFSLIIQEERQRSIGSSPSIESITLMANSERRFSSD-KSKKKDTRPI-CSNCGY 1560
Query: 179 YRHIVVKCAKKFCNYCKKPGH 199
H KC K + PGH
Sbjct: 1561 KGHTADKCYKL---HGYPPGH 1578
>gi|356561472|ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
Length = 2412
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ SI + + +L A +W+ L ++Q + + + ++ E+AR QG L I +
Sbjct: 335 LSWLQRSISEEIAKSLLWCDRASLVWKSLANRFSQGDIFRVADIQEEVARLQQGTLDISS 394
Query: 61 YFSGFQNLWAEYVDMIYVQ-----VPIE--SLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
YF+ W E + ++ +P + D+++ EQ K +FL + +Y RS
Sbjct: 395 YFTKLMTPWEEIENFCPIRDCTCAIPCSCGAATDLRKFKEQDKVIKFLKGIGDQYSHVRS 454
Query: 114 NLMNRDLSPSLDVCFKELLREEQRL 138
+M P+LD F +L++E++
Sbjct: 455 QIMLMSPLPTLDNAFNLILQQERQF 479
>gi|147776446|emb|CAN67362.1| hypothetical protein VITISV_001157 [Vitis vinifera]
Length = 1259
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +N ++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDMGENFLLFGTAKDIWDAAKETYSSSENISELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTL----------------------TRQIVEQKRLFKFFLGLNRELDDVRGRIMGIK 185
Query: 120 LSPSLDVCFKELLREEQR-LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
PSL F E+ REE R +Q+ + A AA + S G D RQ
Sbjct: 186 PLPSLREAFLEVRREESRKKVMMGSKEQSAPTLDGSALAARSFNSNGGD-RQ-------- 236
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 237 ------KRDRPWCDYCKKLGHYKEAC 256
>gi|147856388|emb|CAN79175.1| hypothetical protein VITISV_001884 [Vitis vinifera]
Length = 1487
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 148 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 206
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRD 167
PSL F E+ REE R + ++ +K +A A AA + S G D
Sbjct: 207 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD 257
>gi|222618298|gb|EEE54430.1| hypothetical protein OsJ_01497 [Oryza sativa Japonica Group]
Length = 170
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M I+ S+ SLI++L +TAK +W LK+ Y QD+ A L + Q ++SI
Sbjct: 27 MAAIVNSVKHSLIVSLSKFQTAKAIWGSLKQRYVQDSGALLHTLMQQTHAIEQNDMSIDE 86
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLA--DVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y+S F L M VP + A + E+ +F+M +R +++ R+ L++
Sbjct: 87 YYSAFDRLMGSLTSM----VPACTTAACPAHQFLEKFLTYRFVMGVREDFDSIRTRLLHS 142
Query: 119 DLSPSLDVCFKELLREEQRL 138
+ ++ + +LL EE RL
Sbjct: 143 SSTLTMALALSDLLAEETRL 162
>gi|4206207|gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|4263040|gb|AAD15309.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7270676|emb|CAB77838.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 374
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + + ++ TA +W+ L +++ + + L +I QGNL + +Y
Sbjct: 138 SWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSY 197
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
+ Q LW E + + +E D+ E ++ FLM L Y+A RS ++ +
Sbjct: 198 HTRKQTLWEELTSLQAIPRTVE---DLLIERETNRVIDFLMGLNDCYDAVRSQILMKKTL 254
Query: 122 PSLDVCFKELLREE-QRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PSL F + ++E QR A I M + A + +S + Y+
Sbjct: 255 PSLSEVFNMIDQDEIQRSAR--ISTTPGMTSSVFAVSNQSSQS---------VLNGDTYQ 303
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
K + C YC +PGH+ C
Sbjct: 304 ----KKERPVCTYCSRPGHVEDTC 323
>gi|147795000|emb|CAN76332.1| hypothetical protein VITISV_006269 [Vitis vinifera]
Length = 850
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 56/209 (26%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K +Y+ +N + +E + + QG
Sbjct: 50 MSWLINSMNNDIGENFLLFGTAKDIWDAAKXIYSSFENXLEXFQVELXLHXFRQGE---- 105
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Q++ EQ + +F + L + + R +M
Sbjct: 106 -----------------------------QQIVEQKRLFKFFLGLNRELDDVRGRIMGIK 136
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQCFS 175
PSL F E+ REE R + ++ +K +A A AA + S G D RQ
Sbjct: 137 PLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD-RQ----- 187
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 188 ---------KRDRPWCDYCKKPGHYKETC 207
>gi|147782555|emb|CAN60008.1| hypothetical protein VITISV_024743 [Vitis vinifera]
Length = 1102
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y+ NT++ +E + + QG ++
Sbjct: 20 MSWLINSMNNDIGENFLLFGTAKDIWDATKETYSSFKNTSELFQVESALHDFRQGEQTVT 79
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 80 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 138
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQC 173
PSL F E+ REE R + ++ +K +A A AA + S G D ++
Sbjct: 139 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGDRQKRDR 195
Query: 174 FSCKEYRHIV 183
C +Y H+
Sbjct: 196 PWC-DYSHVT 204
>gi|449500193|ref|XP_004161031.1| PREDICTED: uncharacterized protein LOC101230271 [Cucumis sativus]
Length = 457
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ SI + + +L + K++W+ LK+ Y Q N L ++ +QG+LS++ Y
Sbjct: 98 SWIINSISKEIAASLVYNGNVKEIWDELKERYKQSNGPHIYQLRKDLVTTTQGSLSVEIY 157
Query: 62 FSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
++ +W E V+ + + E + + FLM L Y R+ ++ D
Sbjct: 158 YAKITTIWQELVEYRPMDECTCEGSKKMIDFLNAEFVMIFLMGLNESYSQIRAQILLIDP 217
Query: 121 SPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P ++ F +++EE++ + + ++ + N+ ++ KSK +D R + C +C
Sbjct: 218 LPPINRVFSLIIQEERQRSIGSSPSIESITLMANSERRFSSD-KSKKKDTRPI-CSNCGY 275
Query: 179 YRHIVVKCAKKFCNYCKKPGH 199
H KC K + PGH
Sbjct: 276 KGHTADKCYKL---HGYPPGH 293
>gi|147805068|emb|CAN69184.1| hypothetical protein VITISV_004341 [Vitis vinifera]
Length = 1360
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N + TAK++W+ ++ Y N DNT+ ++ + QG+ +
Sbjct: 89 MSWLINSMTNDIGENFMYYGTAKEIWDAARETYSNIDNTSAIFXIKSILQDLRQGDSTXT 148
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ W + Y ++++ + P + L ++V E+ + +FL+ L + R ++
Sbjct: 149 EYFNILTRYWQQLDIYEELVW-KCPEDGLL-YKKVIEKERIYKFLLGLNKNLDEVRGRVL 206
Query: 117 NRDLSPSLDVCFKELLREE--QRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCF 174
+ PS+ F E+ REE Q++ T + ++A+ + ++
Sbjct: 207 SIKPLPSVREVFSEIRREESRQKVMLGTXNSSKNLENSALVARGTQSNNNNHQTKK---- 262
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKEC-----------PTRPQNCQASQAVVAS 220
+ +C +C+KPGH C P+RPQ + + A+
Sbjct: 263 ------------NRPWCXHCRKPGHXKXTCWHLHGKPVDWKPSRPQQNKEGRGYTAT 307
>gi|125597688|gb|EAZ37468.1| hypothetical protein OsJ_21801 [Oryza sativa Japonica Group]
Length = 172
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M ++ S + + +N +AK MWEYL++ Y Q + A R L + QG+++I+
Sbjct: 1 MAFLCMSAEVPIRMNFIDLSSAKKMWEYLQQRYQQSSAALRFSLRKSLQSLEQGDMTIEE 60
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEV-----HEQSKRDQFLMKLRPKYEAARSNL 115
+ + F +L + M VP Q + EQS F+M+LR +E R L
Sbjct: 61 FHNAFTSLSRQLDSM----VPKAGGGCRQCICKEKYEEQSLMFDFVMRLRLDFEPIRVQL 116
Query: 116 MNRDLSPSLDVCFKELLREEQRL 138
+ R P++ +L+ EE RL
Sbjct: 117 LGRSTLPTMAEALADLIAEETRL 139
>gi|147809628|emb|CAN73351.1| hypothetical protein VITISV_027250 [Vitis vinifera]
Length = 1108
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W++ S+ + N + T K++W+ ++ Y N DNT+ ++ + QG+ ++
Sbjct: 66 ISWLINSMTNDIGENFMYYGTTKEIWDAARETYSNIDNTSAIFEIKSILQDLRQGDSTVT 125
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ W + Y ++++ + P + L ++V E+ +FL+ L + R ++
Sbjct: 126 EYFNILTRYWQQLDIYEELVW-KCPEDGLL-YKKVIEKEHIYKFLLGLNKNLDEVRGRVL 183
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+ PS+ F E+ REE R Q + + A A +S + +
Sbjct: 184 SIKPLPSVREVFSEIRREESRQKVMLGTQNSSKNLENSALVARGTQSNNNNHQ------- 236
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC-----------PTRPQ 209
K + +C++C+KPGH + C P+RPQ
Sbjct: 237 -------TKKNRLWCDHCRKPGHTKETCWHLHGKLADWKPSRPQ 273
>gi|2194136|gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + + ++ TA +W+ L +++ + + L +I QGNL + +Y
Sbjct: 40 SWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSY 99
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
+ Q LW E + V +E D+ E ++ FLM L Y+ RS ++ +
Sbjct: 100 HTRTQTLWEELTSLQAVPRTVE---DLLIERETNRVIDFLMGLNDCYDTVRSQILMKKTL 156
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSL F + ++E + + + I M + + +S + Y+
Sbjct: 157 PSLSEVFNMIDQDETQRSAR-ISTTPGMTSSVFPVSNQSSQS---------ALNGDTYQ- 205
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
K + C+YC +PGH+ C
Sbjct: 206 ---KKERPVCSYCSRPGHVEDTC 225
>gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
TW+M S+ + + +L TA+ +W+ + + QD+ + +E +++ QG++ I Y
Sbjct: 104 TWLMNSVSKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAY 163
Query: 62 FSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
++ Q LW E+ + YV +P+ ++ + + ++S +FLM L YE R
Sbjct: 164 YTELQTLWEEHKN--YVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGLNESYEQTRR 221
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQC 173
+++ +++ F + ++E+ Q ++ DN ++ C
Sbjct: 222 HILMLKPIRTIEEAFNIVTQDER----QKAIRPTPKVDNQ------------DQLKLPLC 265
Query: 174 FSCKEYRHIVVKCAK 188
+C + H V KC K
Sbjct: 266 TNCGKVGHTVQKCYK 280
>gi|147774245|emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
Length = 332
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ Q L ++ TA+++WE L+ ++Q N + +E +IA +Q +++
Sbjct: 87 LSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIERDIACLTQDQMTVAA 146
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y++ + LW E Y AD H++ + QFLM L Y A R ++ +
Sbjct: 147 YYTRLKKLWDELGS--YNDTVCSCGAD----HKRRRLMQFLMGLNESYNAIRGQILLMNP 200
Query: 121 SPSLDVCFKELLREEQR 137
P + + +++EE++
Sbjct: 201 LPDVARAYSSIVQEEKQ 217
>gi|147781357|emb|CAN64965.1| hypothetical protein VITISV_002893 [Vitis vinifera]
Length = 2136
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 229 LTWIRNTSIPSISNLLGSFDDAKSAWDILAKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 288
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIES-LADVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + L D Q+ + ++ + +FLM L +E L
Sbjct: 289 DYYDQLRFIW----DQINLSDPTWACLKDAQQYASIRDEFRLYEFLMSLHKDFEPIHGQL 344
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMH 150
+NR + SLD EL+REE RLA T+ QN+++
Sbjct: 345 LNRSPTSSLDTAVNELVREEARLA--TLQAQNRLN 377
>gi|147816371|emb|CAN66199.1| hypothetical protein VITISV_036508 [Vitis vinifera]
Length = 1404
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQC 173
+++ + +PSLD EL+REE RLAT + QNK++ AI + + + +Q
Sbjct: 56 DMLTKSPAPSLDTVVNELVREEARLAT--LQAQNKLNVLAITPSTSLIEQP----QQSGD 109
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
FS R K KKFCNYCK PGH I+ C
Sbjct: 110 FSGSSNRRKQTK--KKFCNYCKSPGHTIETC 138
>gi|66841323|dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
Length = 463
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ W++ S+ + + ++ +TA+++W+ L++ Y Q + K L+ E+ SQG +
Sbjct: 104 LAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAA 163
Query: 61 YFSGFQNLWAE--YVDMIYV---QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNL 115
YF+ + +W + ++ V + E+ ++ E + QFLM L Y R N+
Sbjct: 164 YFNKLKRIWDQMKVLNTFMVCSCECNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRGNI 223
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA--HWKSKGRD-----M 168
+ PS + + EE + + I N + ++ A+ A+ +W ++ +
Sbjct: 224 LMMKPLPSTAQAYSIISHEETQ---RGIAAGNNVSTDSAAFNASTQNWNNQRNNYDNRAR 280
Query: 169 RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
Q Y +C YC+ GH+ +EC
Sbjct: 281 NQNYNNRRNNYEGRRSNQNNSYCTYCRTSGHVREEC 316
>gi|4539372|emb|CAB40066.1| putative protein [Arabidopsis thaliana]
gi|7267796|emb|CAB81199.1| putative protein [Arabidopsis thaliana]
Length = 294
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
TW+M S+ + + +L TA+ +W+ + + QD+ + +E +++ QG++ I Y
Sbjct: 104 TWLMNSVSKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAY 163
Query: 62 FSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
++ Q LW E+ + YV +P+ ++ + + ++S +FLM L YE R
Sbjct: 164 YTELQTLWEEHKN--YVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGLNESYEQTRR 221
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA 159
+++ +++ F + ++E++ A + + + + ++Y +
Sbjct: 222 HILMLKPIRTIEEAFNIVTQDERQKAIRPTPKVDNVAFQTVSYNSG 267
>gi|147816002|emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ Q L ++ TA+++WE L ++Q N + +E +IA +Q +++
Sbjct: 87 LSWILNSLSQDLADSVIFSTTAQEVWEDLXDRFSQSNAPRIFXIEXDIACLTQDQMTVAA 146
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y++ + LW E Y AD H++ + QFLM L Y A R ++ +
Sbjct: 147 YYTRLKKLWDELGS--YNDTVCSCGAD----HKRXRLMQFLMGLNESYNAIRGQILLMNP 200
Query: 121 SPSLDVCFKELLREEQR 137
P + + +++EE++
Sbjct: 201 LPDVAKAYSSIVQEEKQ 217
>gi|147809827|emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
Length = 2260
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNY 61
W++GS+D SLI N TAK +W+ + Y + A + + L +AR QG+ S++ Y
Sbjct: 87 WLIGSMDPSLIGNFIRFPTAKQVWDAIATTYFDGSDATQVYELRRRVARLRQGSGSLEKY 146
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P++ AD+Q + + D FL L K + S+++
Sbjct: 147 YNDLQGLWRE-IDFRRPN-PMQCPADIQHFNNMLQEDXVYTFLDGLDDKLDNIXSDVLQL 204
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P+ + + + RE N + N + + DM+ C C
Sbjct: 205 KPFPTXEQAYAHVRREA---------VXNSLSLNGKFNSVSKXNGPSNDMK---CSHCGN 252
Query: 179 YRHIVVKCAK 188
+H C K
Sbjct: 253 SKHTRDTCFK 262
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 1178 MSWLVNSMTADIGENFLSFDTAKEIWDIAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 1237
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +DM V + D +++ E + +FL+ L + R +M
Sbjct: 1238 EYFNTLTRLWRQ-LDMFEVHN-WNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 1295
Query: 117 NRDLSPSLDVCFKELLREEQR 137
PSL F E+ REE R
Sbjct: 1296 GVKPLPSLREAFSEVRREESR 1316
>gi|147816509|emb|CAN75071.1| hypothetical protein VITISV_011695 [Vitis vinifera]
Length = 264
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D SL++N + TAK +W+ Y + +T++ L +++ Q SI+ Y
Sbjct: 58 WLINSMDHSLVMNFIRYPTAKQVWDSAATTYFDGTDTSQVYELRRRVSQMKQVGGSIEKY 117
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVH---EQSKRDQFLMKLRPKYEAARSNLMNR 118
++ Q LW E +D + + P+ D+Q H ++ + FL L + + RS+++
Sbjct: 118 YNNLQGLWPE-IDFLRLN-PMSCAIDIQNYHSLLQEERVYTFLDGLDDRLDHVRSDVLCL 175
Query: 119 DLSPSLDVCFKELLREEQR 137
PS++ + + RE+ R
Sbjct: 176 KPFPSIEQAYAHIRREDLR 194
>gi|4263646|gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17065314|gb|AAL32811.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|21387147|gb|AAM47977.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 411
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ +++ + ++ ++ A +MW L + +N ++ LE + QG+L++ Y
Sbjct: 135 SWILNVVNKEIYDSILYYEDAVEMWTDLFTRFRVNNLPRKYQLEQAVMTLKQGSLNLSTY 194
Query: 62 FSGFQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
F+ + LW + ++ V + + ++ E E S+ QFLM L + S ++N
Sbjct: 195 FTKKKTLWEQLLNTKTRSVKKCDCDQVKELLEDAETSRVIQFLMGLNDDFNTIMSQILNM 254
Query: 119 DLSPSLDVCFKELLREE-QRLA--------------TQTILQQNKMHDNAIAYAAAHWKS 163
P L+ + L ++E QRL TQ +L + N I A ++K
Sbjct: 255 KPRPGLNEIYNMLDQDESQRLVGHASKPTPSPAAFQTQGLLTEQ----NPILMAQGNFK- 309
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGH 199
+ +C C H V KC K + PGH
Sbjct: 310 ------KPKCTHCNRIGHTVDKCYKV---HGYPPGH 336
>gi|18378607|gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L K+Y + N + +I+ QG S+
Sbjct: 103 VAWLLTSLIPAIATTVETISSASEMWKTLTKLYSGEGNVMLMVEAQEKISALRQGERSVA 162
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW++ + D + ++ + +A +++ E+ + +FL L P++E R + +
Sbjct: 163 EYVAELKSLWSDLDHYDPLGLEHS-DCIAKMKKWVERRRVIEFLKGLNPEFEGRRDAMFH 221
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ P+LD + +EE + + +L + YA +G++ R +CF+C
Sbjct: 222 QTTLPTLDEAIAAMAQEELK---KKVLPSAAPCSPSPTYAIV----QGKETR--ECFNCG 272
Query: 178 EYRHIVVKC 186
E H++ C
Sbjct: 273 EMGHLMRDC 281
>gi|7767664|gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
Length = 1309
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
TW++ + + + ++ ++ A +MW L + N ++ LE I Q NL + Y
Sbjct: 136 TWLLNVVSKEIYDSILYYEDAVEMWNDLFSRFRVSNLPRKYQLEQSIHTLKQRNLDLSTY 195
Query: 62 FSGFQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
++ + LW + + + V + + ++ E E S+ QFLM L + R ++N
Sbjct: 196 YTKKKTLWVQLANTRVLTVRKCNCDHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNM 255
Query: 119 DLSPSLDVCFKELLREE-QRLATQTIL---------QQNKMHDNAIAYAAAHWKSKGRDM 168
P L + L ++E QRL T L Q + + D+ + A +K
Sbjct: 256 KPRPGLTEIYNMLDQDESQRLVGSTPLSNLTAAFQVQASPVIDSQVNMAQGSYK------ 309
Query: 169 RQVQCFSCKEYRHIVVKCAKK 189
+ +C C + H+V KC KK
Sbjct: 310 -KPKCSFCNKLGHLVDKCYKK 329
>gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
Length = 1262
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L K+Y + N + +I+ QG S+
Sbjct: 102 VAWLLTSLIPAIATTVETISSASEMWKTLTKLYSGEGNVMLMVEAQEKISALRQGERSVA 161
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW++ + D + ++ + +A +++ E+ + +FL L P++E R + +
Sbjct: 162 EYVAELKSLWSDLDHYDPLGLEHS-DCIAKMKKWVERRRVIEFLKGLNPEFEGRRDAMFH 220
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ P+LD + +EE + + +L + YA +G++ R +CF+C
Sbjct: 221 QTTLPTLDEAIAAMAQEELK---KKVLPSAAPCSPSPTYAIV----QGKETR--ECFNCG 271
Query: 178 EYRHIVVKC 186
E H++ C
Sbjct: 272 EMGHLMRDC 280
>gi|4388829|gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYF 62
WI SI+ + + A +W+ LK+ ++ N + + +++ Q ++ Y+
Sbjct: 101 WIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCRQDGQAVIEYY 160
Query: 63 SGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKL-RPKYEAARS 113
NLW EY IY V + + ++ + E+ K QF++ L ++ +
Sbjct: 161 GRLSNLWEEY--NIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCA 218
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA------HWKSKGRD 167
L+N D PSL + ++REEQRLA+ + +Q + A+ + A H +
Sbjct: 219 TLINMDPLPSLGEIYSRVIREEQRLASVHVREQK---EEAVGFLARREQLDHHSRVDASS 275
Query: 168 MRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
R + + ++K + C+ C + GH KEC
Sbjct: 276 SRSEHTGGSRS--NSIIK-GRVTCSNCGRTGHEKKEC 309
>gi|147781957|emb|CAN72168.1| hypothetical protein VITISV_004170 [Vitis vinifera]
Length = 1415
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 8 IDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
I+ S+I++ ++ D+ K+ Y+ +NT++ +E + + QG S+ Y++
Sbjct: 87 IENSMIMSWLINSMNNDI---AKETYSSSENTSELFQVESALHDFRQGEQSVTQYYNTLT 143
Query: 67 NLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSL 124
W + +D+ + A +++ EQ + +F + L +++ R +M PSL
Sbjct: 144 RYWQQ-LDLFETHSWKCSDDAATYKKIVEQKRLFKFFLGLNREFDDVRGRIMGIKPLPSL 202
Query: 125 DVCFKELLREEQRLATQTIL---QQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
F E+ REE R + I+ +Q +A A+AA + S G D RQ
Sbjct: 203 REAFSEVRREESR--KKVIMGSKEQPAPTLDASAFAARSFNSSGGD-RQ----------- 248
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 249 ---KRDRPWCDYCKKPGHYKEAC 268
>gi|52354133|gb|AAU44387.1| hypothetical protein AT1G21280 [Arabidopsis thaliana]
Length = 237
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M W+M S+ L+ ++ +TA MWE L++V+ K L +A QG S++
Sbjct: 87 MYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEE 146
Query: 61 YFSGFQNLWAEYVDMIYVQVP--------IESLADVQEVHEQSKRDQFLM--KLRPKYEA 110
YF +W E + Y +P E +E E+ +R +FLM KL +EA
Sbjct: 147 YFGKLSKVWMELSE--YAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEA 204
Query: 111 ARSNLMNRDLSPSLDVCF 128
+ +M + PSL F
Sbjct: 205 VTTKIMFQKPPPSLHEAF 222
>gi|15218961|ref|NP_173550.1| uncharacterized protein [Arabidopsis thaliana]
gi|28393025|gb|AAO41947.1| unknown protein [Arabidopsis thaliana]
gi|28827240|gb|AAO50464.1| unknown protein [Arabidopsis thaliana]
gi|55740501|gb|AAV63843.1| hypothetical protein At1g21280 [Arabidopsis thaliana]
gi|332191960|gb|AEE30081.1| uncharacterized protein [Arabidopsis thaliana]
Length = 237
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M W+M S+ L+ ++ +TA MWE L++V+ K L +A QG S++
Sbjct: 87 MYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEE 146
Query: 61 YFSGFQNLWAEYVDMIYVQVP--------IESLADVQEVHEQSKRDQFLM--KLRPKYEA 110
YF +W E + Y +P E +E E+ +R +FLM KL +EA
Sbjct: 147 YFGKLSKVWMELSE--YAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEA 204
Query: 111 ARSNLMNRDLSPSLDVCF 128
+ +M + PSL F
Sbjct: 205 VTTKIMFQKPPPSLHEAF 222
>gi|31249714|gb|AAP46207.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1176
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L K+Y + N + +I+ QG S+
Sbjct: 103 VAWLLTSLIPAIATTVETISSASEMWKTLTKLYSGEGNVMLMVEAQEKISALRQGERSVA 162
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW++ + D + ++ + +A +++ E+ + +FL L P++E R + +
Sbjct: 163 EYVAELKSLWSDLDHYDPLGLEHS-DCIAKMKKWVERRRVIEFLKGLNPEFEGRRDAMFH 221
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ P+LD + +EE + + +L + YA +G++ R +CF+C
Sbjct: 222 QTTLPTLDEAIAAMAQEELK---KKVLPSAAPCSPSPTYAIV----QGKETR--ECFNCG 272
Query: 178 EYRHIVVKC 186
E H++ C
Sbjct: 273 EMGHLMRDC 281
>gi|147801872|emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ Q L ++ TA+++WE L+ ++Q N +E +IA +Q +++
Sbjct: 87 LSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTNAPHIFQIERDIACLTQDQMTVAA 146
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y++ + LW E Y AD H++ + QFLM L Y A R ++ +
Sbjct: 147 YYTRLKKLWDELGS--YNDTVCSCGAD----HKRRRLMQFLMGLNESYNAIRGQILLMNP 200
Query: 121 SPSLDVCFKELLREEQR 137
P + + +++EE++
Sbjct: 201 LPDVAKAYSSIVQEEKQ 217
>gi|147771937|emb|CAN75698.1| hypothetical protein VITISV_035985 [Vitis vinifera]
Length = 1105
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+++ + N + A+++WE + ++Y N N ++ L ++ + QG +I
Sbjct: 94 MSWLVNSMEEDISSNYMCYPIAQELWENVNQMYSNLGNQSQIFELTLKLGKIQQGEDNIT 153
Query: 60 NYFSGFQNLWAEYVDMI--YVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
YF+ + +W + +D+ Y E ++ E ++ +FL L +++ R ++
Sbjct: 154 KYFNSSKRIWQD-LDLFNTYEWKSTEDGLHHKKTMEDNQIFKFLAGLNVEFDEVRGRIIG 212
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
R PS+ F + REE R + ++ K AI + G + V
Sbjct: 213 RQPLPSIGEVFSXVRREESR---RNVMLGKKGXGVAIEGSXLVTTXGGYNKXXV------ 263
Query: 178 EYRHIVVKCAKKFCNYCKKPGHIIKE 203
+ H + + +C++C KP H E
Sbjct: 264 -FXHKSDERPRVWCDFCNKPXHTRNE 288
>gi|12322504|gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ W+ S+D + ++ + A+ MWE L+ Y+ N ++ L+Y+I Q + N
Sbjct: 92 VGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNASRVHQLKYDIVACRQDGQTAAN 151
Query: 61 YFSGFQNLWAEYVDM-IYVQVPIESLADVQEVHEQSKRD-----QFLMKL-RPKYEAARS 113
YF + +W + D + + V + +RD QFLM L K+ +R+
Sbjct: 152 YFGKLKVMWDDLDDYEPLLTCCCNRPSCTHRVRQSQRRDHERIHQFLMGLDAAKFGTSRT 211
Query: 114 NLMN---RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQ 170
N++ RD + SLD + E++ EE+ L TI + + +A+ +A + + +
Sbjct: 212 NILGRLSRDDNISLDSIYSEIIAEERHL---TITRSKEERVDAVGFAVQTGVNAIASVTR 268
Query: 171 VQ----CFSCKEYRHIVVKCAK 188
V C C H C K
Sbjct: 269 VNNMGPCTHCGRSNHSADTCFK 290
>gi|147768451|emb|CAN78330.1| hypothetical protein VITISV_034973 [Vitis vinifera]
Length = 1049
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 93 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 152
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + +++ EQ + +F + L + + +M
Sbjct: 153 QYYNTLTRYWQQ-LDLFETHSWKCSDDATTYRQIVEQKRLFKFFLGLNRELDDVSGRIMG 211
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRD 167
PSL F E+ REE R + ++ +K +A A AA + S G D
Sbjct: 212 IKPLPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGD 262
>gi|147774435|emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ Q L ++ TA+++WE L+ ++Q N + +E +IA +Q +++
Sbjct: 87 LSWILNSLSQDLADSVIFSTTAQEVWEDLRDHFSQSNAPRIFQIERDIACLTQDQMTVXA 146
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y++ + LW E Y AD H++ + QFLM L Y A R ++ +
Sbjct: 147 YYTRLKKLWDELGS--YNDTVCSCGAD----HKRRRLMQFLMGLNESYNAIRGQILLMNP 200
Query: 121 SPSLDVCFKELLREEQRLATQTI 143
P + + +++E ++ + I
Sbjct: 201 LPDVAKAYSSIVQEXKQRSLGAI 223
>gi|147806431|emb|CAN67620.1| hypothetical protein VITISV_004593 [Vitis vinifera]
Length = 326
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W++ S+D+ + N + TAK++W+ + +Y+ N ++ L ++ QGN S+
Sbjct: 84 MMWLVNSMDEDISSNYLCYPTAKELWDNINLMYSDLGNQSQIFELTLKLGEIRQGNDSVT 143
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ + LW + Y D Y E+ ++ E ++ +FL+ L +++ + ++
Sbjct: 144 KYFNSLKRLWQDLNLYND--YEWKSPENCNQHKKTMEDNRIYKFLVGLNVEFDEVQGRII 201
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKM 149
R PS+ F E+ REE A + Q++M
Sbjct: 202 GRSPLPSISNVFSEVRREENIAANKASNYQHRM 234
>gi|357476713|ref|XP_003608642.1| hypothetical protein MTR_4g098730 [Medicago truncatula]
gi|355509697|gb|AES90839.1| hypothetical protein MTR_4g098730 [Medicago truncatula]
Length = 75
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 75 MIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSL 124
++YV VP SLA VQEV+ S+RDQFLMKLRP++E R+ L ++ SL
Sbjct: 21 LLYVDVPKASLAAVQEVYNTSRRDQFLMKLRPEFEVVRAKLKTVEMWESL 70
>gi|9989049|gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ + S++ S++ +TAK++W+ LK VY N+ N + ++ I SQ +L
Sbjct: 71 LALLQNSLETSILEGYSYCETAKELWDTLKNVYGNESNLTRVFEVKKAINELSQEDLEFT 130
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLM 116
+F F++LW+E + D + +HE+ ++D+ L+ L P Y +L+
Sbjct: 131 KHFGKFRSLWSELKSL------RPGTLDPKILHERREQDKVFGLLLTLNPGYNDLIKHLL 184
Query: 117 NRDLSPSLD-VCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ PSLD VC K +++EQ + + N A K D + + C
Sbjct: 185 RSEKLPSLDEVCSK--IQKEQGSTGLFGGKSELITANKGEVVANKGVYKNEDRKLLTCDH 242
Query: 176 CKEYRHIVVKC 186
CK+ H KC
Sbjct: 243 CKKKGHTKDKC 253
>gi|147834281|emb|CAN67490.1| hypothetical protein VITISV_035976 [Vitis vinifera]
Length = 527
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 55/224 (24%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 30 LTWIRNTSIPSISNLLGSFDDAKSAWDMLAKRYSTTHGSMKYQLVVELHQLKQEPGQSIN 89
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E R L
Sbjct: 90 DYYDQLRFIW----DQIDLSDPTWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 145
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+N +PSLD EL Q FS
Sbjct: 146 LNP--APSLDTAVNEL--------------------------------------QSGDFS 165
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVA 219
R + KKFCNYCK+PGH I+ C R S AVVA
Sbjct: 166 GSSNRR--KQTNKKFCNYCKRPGHTIETCYRR----NKSTAVVA 203
>gi|147797381|emb|CAN69170.1| hypothetical protein VITISV_015593 [Vitis vinifera]
Length = 384
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ ++ N L+ T K++W+ ++ Y N +NT++ +E + QG+LS+
Sbjct: 38 MSWLINSMNTNIGENFLLYGTTKEIWDAARETYSNSENTSEIFEIEATLHDLRQGDLSVT 97
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHE-QSKRDQFLMKLRPKYEAARSNLMNR 118
YF+ W +++DM E+H + D L + + +M
Sbjct: 98 QYFNILSRHW-QHLDMF-------------EIHTWKCPEDTTLYR-----KIVEGRVMGT 138
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
PS+ F E+ REE R Q + + A AA R+ + E
Sbjct: 139 KPLPSIREAFSEVYREESRKKVMMGSQNSALSIEGSALAA----------REPPANTNSE 188
Query: 179 YRHIVVKCAKKFCNYCKKPGH 199
R K + +C++C+K GH
Sbjct: 189 NRQ---KKGRPWCDHCRKLGH 206
>gi|224117584|ref|XP_002317615.1| predicted protein [Populus trichocarpa]
gi|222860680|gb|EEE98227.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI ++ + L A+ +W L + Q N + L ++A Q S+ +
Sbjct: 100 VSWIQNAVSTDIKHTLVFVDDAQMVWTELNDRFTQQNGHRIFQLRRDLATLRQDKDSVSS 159
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLMN 117
YF + LW E + +Y +P+ + ++ ++E+ +RD QFLM L +Y AR +M
Sbjct: 160 YFGNLKTLWDEMI--VYNPMPLCTCGQLKVLNERYQRDYVIQFLMGLNDQYTNARDQIML 217
Query: 118 RDLSPSLDVCFKELLREEQ 136
+ PS++ F + ++EQ
Sbjct: 218 IEPLPSINKVFSLIQQQEQ 236
>gi|147767633|emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]
Length = 1285
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N L+ TAK++W+ K+ Y N +NT + +E + + QG L++
Sbjct: 70 MSWLINSMTNDIGENFLLYGTAKEIWDAAKETYSNNENTLELFEVESVLHDFRQGELTVT 129
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ W + +D+ + + L D +++ E+ + +FL+ L + R ++
Sbjct: 130 QYFNTLNRYWQQ-LDL-FEEHNWSCLGDGIKYKQIIERKRIYKFLIGLNKNLDEVRGRIL 187
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
++ F E+ REE R Q + + + A A D +
Sbjct: 188 GSKPLLNIREAFSEVRREESRKKIMMGSQDSVTNPESSALAVRGNPFNNNDHKP------ 241
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C++C++ GH C
Sbjct: 242 --------KKGRPWCDHCRRXGHTKDTC 261
>gi|147799759|emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
Length = 1625
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D SLI N TAK +W+ Y + +T++ L + R Q SI+ Y
Sbjct: 80 WLINSMDPSLIANFIXFPTAKQVWDSAAITYFDGTDTSQVYDLRRRVTRMKQAGGSIEKY 139
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P+E D+Q+ + + D+ FL L + + RS+++
Sbjct: 140 YNDLQGLWRE-IDFRRPN-PMECAIDIQKYNSILQEDRVYTFLDGLDDRLDKTRSDVLQI 197
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKG 165
P+++ + + REE R Q M A A SKG
Sbjct: 198 KPFPTVEQAYAFVRREEVR--------QTVMISGADTPPGAVMASKG 236
>gi|147782177|emb|CAN63193.1| hypothetical protein VITISV_017130 [Vitis vinifera]
Length = 2336
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 1128 SVDPKILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 1186
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ VQ Q++ D+F M LRP E R ++
Sbjct: 1187 SLKEEFLTVM----PLTPDVGVQ----QTQLDKFFMVLTLIGLRPDLEPVRDQILGSSSV 1238
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LR +TQT L + D+++ + + +R
Sbjct: 1239 PSLDDVFTRFLRIS---STQT-LPFDSTSDSSVLVSQTSSRGSRSGIRG----------- 1283
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 1284 ---RGQRPHCTYCNKLGHARDRC 1303
>gi|147844168|emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
Length = 1636
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 94 MSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 153
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D + + D +++ E + +FL+ L + R +M
Sbjct: 154 EYFNTLTRLWRQ-IDTFEIH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 211
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL E+ REE R + ++ + N +A + D RQ
Sbjct: 212 GVKPLPSLREACSEVRREEIR---KNLMMGSHQQLNMAESSALKTQFAPFDNRQ------ 262
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C+K GH + C
Sbjct: 263 ------KIKEGRPWCDHCRKSGHSRETC 284
>gi|147765933|emb|CAN62423.1| hypothetical protein VITISV_020608 [Vitis vinifera]
Length = 1177
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPKILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ + + + + +Q++ D+F M LR E+ R ++
Sbjct: 137 SLKEEFLTVMPLTLDVGA--------QQTQLDKFFMVLTLIGLRSDLESVRDQILGSLSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + + D+A+ +H S+G C R
Sbjct: 189 PSLDDVFARLLRIS---STQT-LPSDSISDSAV--LVSHTTSRG---------GCSGNRG 233
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ C YC K GH C
Sbjct: 234 ---RGQHPHCTYCNKLGHTRDRC 253
>gi|147778633|emb|CAN76111.1| hypothetical protein VITISV_005526 [Vitis vinifera]
Length = 825
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ +++ ++ N+ + TA ++WE L++ ++Q N + ++ +IA Q LS+ Y
Sbjct: 42 SWIVNTLNPEIVDNVIYYSTAYEVWEDLRERFSQSNAHRIFEIQQDIACLRQEQLSVSAY 101
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
++ + LW E ++A + +Q K QFLM L Y A R ++ +
Sbjct: 102 YTKLKGLWDELASY--------NVAPHRAQQDQQKLMQFLMGLNESYSAIRGQILLMNPL 153
Query: 122 PSLDVCFKELLREEQR-LATQT 142
PS+ + + +EE+ L T T
Sbjct: 154 PSVLQAYSSVSQEEKHCLLTST 175
>gi|116309912|emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]
Length = 1120
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L +Y + N + +I+ QG S+
Sbjct: 103 VAWLLTSLIPAIATTVETISSASEMWKTLTNLYSGEGNVMLMVEAQEKISVLRQGERSVA 162
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW++ + D + ++ P + +A +++ E+ + +FL L ++E R + +
Sbjct: 163 EYVAELKHLWSDLDHYDPLGLEHP-DCIAKMRKWIERRRVIEFLKGLNSEFEGRRDAMFH 221
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ PSLD + +EE + + +L + Y A K +CF+C
Sbjct: 222 QTTLPSLDEAIAAMAQEELK---KKVLPSATPSSPSPTYVVAQSK------ETRECFNCG 272
Query: 178 EYRHIVVKC 186
E H++ C
Sbjct: 273 EMGHLIRDC 281
>gi|147768962|emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera]
Length = 1287
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K+ + +++NT++ +E + QGNL++
Sbjct: 94 MSWLVNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVT 153
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
YF+ L +D V + +++ E + +FL+ L + R +M
Sbjct: 154 EYFNTLTRL-XRQLDTFEVHNWNCVTBGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIMG 212
Query: 118 RDLSPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
PSL F E+ REE R L + Q N +A+ A + D RQ
Sbjct: 213 VKPLPSLREAFSEVRREESRKNLMMGSHQQLNMAESSALKTQFAPF-----DNRQ----- 262
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+K + +C++C K GH + C
Sbjct: 263 -------KIKGGRPWCDHCXKXGHSRETC 284
>gi|255576655|ref|XP_002529217.1| conserved hypothetical protein [Ricinus communis]
gi|223531335|gb|EEF33173.1| conserved hypothetical protein [Ricinus communis]
Length = 93
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+WI+ S++ S++LNLK +KT+++MW YLKK + A G N
Sbjct: 11 MSWILRSMEPSILLNLKPYKTSREMWGYLKKFTTK-------------ATQHDGFNWKSN 57
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD 98
+ + + A+Y D++ +P E L +Q VHE SK D
Sbjct: 58 WVNSVKG--ADYNDIVCASIPPEGLIAIQSVHETSKHD 93
>gi|147773401|emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ Q L ++ TA+++WE L+ ++Q N + +E IA +Q +++
Sbjct: 41 LSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIERGIACLTQDQMTVAA 100
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y++ + LW E Y AD +++ + QFLM L Y A R ++ +
Sbjct: 101 YYTRLKKLWDELGS--YNDTVCSCGAD----YKRRRLMQFLMGLNESYNAIRGQILLMNP 154
Query: 121 SPSLDVCFKELLREEQR 137
P++ + +++EE++
Sbjct: 155 LPNVAKAYSSIVQEEKQ 171
>gi|8843739|dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ WI SI+ + + A +W LK+ ++ N + ++ ++A Q + +
Sbjct: 94 VGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQDGQPVID 153
Query: 61 YFSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKL-RPKYEAA 111
Y+ LW E+ IY + + + + + E+ K QF++ L ++
Sbjct: 154 YYGRLCKLWEEF--QIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGL 211
Query: 112 RSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV 171
+ L+ D PSL + ++REEQRLA+ I +Q + +AI + RQ
Sbjct: 212 SATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQ---SAIGFLT----------RQS 258
Query: 172 QCFSCKEYRHIVVKCAKK--FCNYCKKPGHIIKEC 204
+ + ++K + C++C + GH K+C
Sbjct: 259 EVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDC 293
>gi|356575040|ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
Length = 2045
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ S+ ++ A+++W LK Y+Q + + S L+ E + QG L++
Sbjct: 427 VSWIVHSVATSIRQSILWMDKAEEIWRDLKSRYSQGDLLRISDLQQEASTMKQGTLTVTE 486
Query: 61 YFSGFQNLWAEYVDM-------IYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
YF+ + +W E + ++ + + + + + QFL L +Y RS
Sbjct: 487 YFTCLRVIWDEIENFRPDPICSCNIRCSCNAFTIIAQRKLEDRAMQFLRGLNEQYANIRS 546
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQC 173
+++ D P++ F + ++E++L T G +
Sbjct: 547 HVLLMDPIPTISKIFSYVAQQERQLLGNT--------------------GPGINF----- 581
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
E + I + AK C++C + GH+ C
Sbjct: 582 ----EPKDISINAAKTVCDFCGRIGHVESTC 608
>gi|12321355|gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +ID L+ N+ A+D+WE ++K ++ N K ++ ++A Q ++++
Sbjct: 88 VSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEG 147
Query: 61 YFSGFQNLWAEYVDMIYVQVPIE---------SLADVQEVH-EQSKRDQFLMKL-RPKYE 109
Y+ +W D I P+ +L QE + E Q+L L K+
Sbjct: 148 YYGKLNKIW----DNINSYRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKFH 203
Query: 110 AARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR 169
RS+L +R P L+ + + +EE + ++ N+ + A+A MR
Sbjct: 204 TIRSSLTSRVPLPGLEEVYNIVRQEEDMVNNRS---SNEERTDVTAFAV--------QMR 252
Query: 170 QVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNC 211
+++ + KK C +C + GH P+NC
Sbjct: 253 PRSEVISEKFANSEKLQNKKLCTHCNRGGH-------SPENC 287
>gi|297791745|ref|XP_002863757.1| hypothetical protein ARALYDRAFT_917481 [Arabidopsis lyrata subsp.
lyrata]
gi|297309592|gb|EFH40016.1| hypothetical protein ARALYDRAFT_917481 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
SI + ++ +A +W+ L +++N+ N A+ LE E+A QG SI +F +
Sbjct: 42 SISSGVFEHVSRCTSASSIWQALDRLFNKKNEARLQLLENELANAKQGESSISEFFIKVK 101
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMK-LRPKYEAARSNLMNRDLSPSLD 125
N+ +E I P ES++D Q +F+++ LRP+Y +++ PSL+
Sbjct: 102 NICSE----INSLNPEESISDAQ-------LKRFIIRGLRPEYTPFVTSVQGWATQPSLE 150
Query: 126 VCFKELLREEQRLATQTILQQNKMHDN-AIAYAA-------------------AHWKSKG 165
F+ LL ++ LA Q + K+HD+ A+ A H S
Sbjct: 151 E-FENLLASQESLAVQ--MAGVKIHDDSGSAFVARRQQNFKAKSNDGGPRNNDGHEGSSK 207
Query: 166 RDMRQVQCFSCKEYRHI 182
D ++ +C+ C + H
Sbjct: 208 GDKKKFKCYRCGKLGHF 224
>gi|2642431|gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ WI SID ++ + A +WE L++ ++ N +++ L+ EIA +Q +
Sbjct: 88 VGWIRTSIDPTIRSTVGFVSEASQLWENLRRRFSVGNGVRKTLLKDEIAACTQDGQPVLA 147
Query: 61 YFSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y+ LW E + + E+ +D+++ E + +FL+ L ++ + RS++ + +
Sbjct: 148 YYGRLIKLWEELQNYKSGRECKCEAASDIEKEREDDRVHKFLLGLDSRFSSIRSSITDIE 207
Query: 120 LSPSLDVCFKELLREEQRL-ATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P L + ++REEQ L A++T ++ + AI ++ VQ +
Sbjct: 208 PLPDLYQVYSRVVREEQNLNASRT---KDVVKTEAIGFS-------------VQSSTTPR 251
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKEC 204
+R + FC +C + GH + +C
Sbjct: 252 FR----DKSTLFCTHCNRKGHEVTQC 273
>gi|147796443|emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
Length = 970
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + + +L TA +W L+ + Q N + ++ + SQG+L +
Sbjct: 95 ISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVST 154
Query: 61 YFSGFQNLWAEYVDM-IYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ + LW E + ++ E +Q QFLM L + RS ++ +
Sbjct: 155 YYTRLKILWDELKGFQPLPECACGTMKTWMEFQQQEYVMQFLMGLNESFVQTRSQILMME 214
Query: 120 LSPSLDVCFKELLREEQR------LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQC 173
P + F + ++E++ L T ++ +A +AA SK + R C
Sbjct: 215 PLPPIAKVFSLVAQDERQCSINYGLYTPPDSVAANDSNSTVAISAARLNSKPKKDRPT-C 273
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKE 203
C H V KC K Y PG+ K
Sbjct: 274 SHCGILGHTVDKCYKL---YGYPPGYKFKS 300
>gi|255579435|ref|XP_002530561.1| conserved hypothetical protein [Ricinus communis]
gi|223529899|gb|EEF31829.1| conserved hypothetical protein [Ricinus communis]
Length = 89
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
+ Y+ + S + F G L A +D+ V + +SL D +HE SK D FLMKL+
Sbjct: 10 SLLMYTVVSCSNRGSFLGALGLQAA-IDLC-VTMSKDSLPDGLAIHEISKCDHFLMKLQ- 66
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREE 135
SNLMNR P LDVCF ELL EE
Sbjct: 67 ------SNLMNRHPPPILDVCFSELLHEE 89
>gi|2245104|emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein [Arabidopsis thaliana]
Length = 1433
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 20/185 (10%)
Query: 18 LHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIY 77
L +MW L + N ++ LE I QGNL + Y++ + LW + +
Sbjct: 138 LLNVVTEMWNDLFSRFRVSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLANTRV 197
Query: 78 VQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLRE 134
+ V E + ++ E E S+ QFLM L + R ++N P L + L ++
Sbjct: 198 LTVRKCNCEHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEIYNMLDQD 257
Query: 135 E-QRLATQTIL---------QQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVV 184
E QRL L Q + + D+ + A +K + +C C + H+V
Sbjct: 258 ESQRLVGNPTLSNPTAAFQVQASPIIDSQVNMAQGSYK-------KPKCSYCNKLGHLVD 310
Query: 185 KCAKK 189
KC KK
Sbjct: 311 KCYKK 315
>gi|344178892|dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
Length = 1591
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQN 60
TWI+ ++D S+I N+ + TAK +W+ L Y ++ ++ + L + QG+ +++
Sbjct: 107 TWILQNVDASMINNVSRYPTAKALWDGLALTYGSRGDSLQVFDLHRKANNIRQGDDTLEA 166
Query: 61 YFSGFQNLWA--EYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
++ Q++W + +D ++ P E ++ + ++ + QFL + ++E + L+ R
Sbjct: 167 CWNNLQDIWVSIDTLDTNPMKCP-EDISLYNQKMQEFRLYQFLTAVSDRFETEKKELLKR 225
Query: 119 DLSPSLDVCFKELLREEQRLA------TQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ 172
P+++ F E R E + ++ I + A + KG D R +
Sbjct: 226 TPLPNVEAAFFEFKRAESQAGLIKHGPSEQISSLGIGQGLTVKPATGKGRGKGTD-RSMN 284
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ K + C +C K GH ++C
Sbjct: 285 TIRSNNASSRMDK-SNLLCEHCGKKGHSREKC 315
>gi|71834720|gb|AAZ41812.1| 01P13-2 [Brassica rapa subsp. pekinensis]
Length = 558
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
MT + S+D +++ ++AK++W+ LKKV+ N N ++ ++ I R +Q ++
Sbjct: 75 MTVLHASLDPAILDAYSYCESAKELWDTLKKVHGNTSNLSRVFEVKLAINRLAQEDMEFT 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD-VQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
+ F++LW+E ++M+ P + D + E EQ K L+ L P Y +++
Sbjct: 135 KHLGRFRSLWSE-LEMLR---PSTTDPDQLNERREQDKVFGLLLTLNPAYTQLIQHMLRS 190
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
D P L+ ++ RE+ + L K + ++A AAH S + Q S +
Sbjct: 191 DKLPDLEEVCAQIQREQGSMG----LFGGK-GELSLANQAAHEDST--EAPQANKASHGK 243
Query: 179 YRHIVVKCAKKF---CNYCKKPGHIIKEC 204
Y +KF C++CKK GH +C
Sbjct: 244 YED------RKFNGNCDHCKKHGHKKSQC 266
>gi|147860024|emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
Length = 1355
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+WI+ S+++++ +++ D+WE L+ +Y NQ+N+A+ ++ E+ Q
Sbjct: 88 MSWILNSMERNIAEIFSYSESSLDLWEALRDMYGNQNNSARIFQIQQEVNALRQDGRPFV 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+ F++LW+E +Y ++ + +++ E+ + Q L L ++E R +++
Sbjct: 148 SLLGNFKSLWSEL--EVYRPHTVDPVV-LKKRTEEDRVFQVLASLGSEFEDLRCHILMSP 204
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSL + REE R + ++++ + + AH +G+ ++
Sbjct: 205 ELPSLKSVCSTIQREEVR--RKVMIRETVTNSSDTRAYIAHKNYEGKSIKG--------- 253
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
+ + +K C +C PGH C
Sbjct: 254 KRLDLK-----CEHCNAPGHTSDRC 273
>gi|147797686|emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]
Length = 1179
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 40/207 (19%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 38 SVDPKILLHLRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 96
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++++ D+F M LRP E R ++
Sbjct: 97 SLKEEFLTVM----PLTT--DVGD--QRTQIDKFFMVLTLIGLRPDLETVRDQILGSSSV 148
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYA----AAHWKSKGRDMRQVQCFSCK 177
PSLD F LLR +TQT+ N + + H ++GR R
Sbjct: 149 PSLDDVFAHLLRIS---STQTLSSDNTSDSSVLVSQTNSRGGHSGNRGRGQR-------- 197
Query: 178 EYRHIVVKCAKKFCNYCKKPGHIIKEC 204
C YC K GH C
Sbjct: 198 -----------PHCTYCNKLGHTRDRC 213
>gi|27573360|gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L +Y + N + +I+ QG S+
Sbjct: 103 VAWLLTSLIPAIATTVETISSASEMWKTLTNLYSGEGNVMLMVEAQEKISVLRQGERSVA 162
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW++ + D + ++ P + +A +++ E+ + +FL L ++E R + +
Sbjct: 163 EYVAELKHLWSDLDHYDPLGLEHP-DCIAKMRKWIERRRVIEFLKGLNSEFEGRRDAMFH 221
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ PSLD + +EE + + +L + Y A K +CF+C
Sbjct: 222 QTTLPSLDEAIAAMAQEELK---KKVLPSATPSSPSPTYVVAQSK------ETRECFNCG 272
Query: 178 EYRHIV 183
E H++
Sbjct: 273 EMGHLI 278
>gi|147860623|emb|CAN83575.1| hypothetical protein VITISV_025852 [Vitis vinifera]
Length = 1474
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L TAKD+W+ K+ Y+ +NT + +E + + QG S+
Sbjct: 220 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSFENTLELFQVESTLHDFRQGEQSVT 279
Query: 60 NYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ W + +D+ + A +++ EQ + +F + L + + R +M
Sbjct: 280 QYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMG 338
Query: 118 -RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+ L S F+E Q +A A AA + S G D C
Sbjct: 339 IKPLPKSQGGFFRE---------------QPAPTLDASALAARSFNSSGGD--------C 375
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ K + +C+YCKK GH + C
Sbjct: 376 Q-------KRDRPWCDYCKKLGHYKEVC 396
>gi|147806117|emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 25 MWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIES 84
MWE LK+ Y N + L EI Q +++ Y++ + +W E Y+++P +
Sbjct: 1 MWEDLKERYAVGNAPRVHQLRSEIVNLKQEGMTVAAYYAKIKGMWDELNQ--YIEIPECT 58
Query: 85 LADVQEV---HEQSKRDQFLMKL-RPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLAT 140
Q + E K QFLM L + RS+++ D P+L + + +EE+ +
Sbjct: 59 CGAAQAIVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERHRS- 117
Query: 141 QTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC 186
+ + +AA K G+ + C C + H V C
Sbjct: 118 ---MARGADRAEITVFAAXTEKPGGQTNKSGSCTHCGKTGHDVADC 160
>gi|147777583|emb|CAN69307.1| hypothetical protein VITISV_001120 [Vitis vinifera]
Length = 1215
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 44/203 (21%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPKILLHLRAYKTCFKFWTQTKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQF-----LMKLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F L+ LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFVVLTLIGLRPDLEPVRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F L R+++ L + + D+++ ++GR R
Sbjct: 189 PSLDDVFARL----HRISSTQTLPSDSISDSSVG-------NRGRGQR------------ 225
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
C YC K GH C
Sbjct: 226 -------PHCTYCNKLGHTRDRC 241
>gi|395146527|gb|AFN53681.1| gag protein [Linum usitatissimum]
Length = 375
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + ++ K+A+ W L+ ++Q + K + L+ ++ QG S+
Sbjct: 107 LSWILRSVSPIIAKSILYSKSARSAWVVLRSRFSQGDAFKIADLQEKVFALKQGTRSVTE 166
Query: 61 YFSGFQNLWAEYVDMIYVQVPIES----------LADVQEVHEQSKRDQFLMKLRPKYEA 110
+F+ L+ E + P+ L+ ++ H+Q + +FL L +
Sbjct: 167 FFTELITLYDELSNF----RPLPDCACPPPCTCILSKIRTYHDQDRVIRFLRGLTDGFAG 222
Query: 111 ARSNLMNRDLSPSLDVCFKELLREEQ 136
ARS +M D PSLD F ++++E+
Sbjct: 223 ARSQVMLLDPLPSLDRVFAMMVQQER 248
>gi|3779026|gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+ WI SI+ + + A +W LK+ ++ N ++ ++A Q + +
Sbjct: 94 VGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQDGQPVID 153
Query: 61 YFSGFQNLWAEYVDMIYVQVPI--------ESLADVQEVHEQSKRDQFLMKL-RPKYEAA 111
Y+ LW E+ IY + + + + + E+ K QF++ L ++
Sbjct: 154 YYGRLCKLWEEF--QIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGL 211
Query: 112 RSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV 171
+ L+ D PSL + ++REEQRLA+ I +Q + +AI + RQ
Sbjct: 212 SATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQ---SAIGFLT----------RQS 258
Query: 172 QCFSCKEYRHIVVKCAKK--FCNYCKKPGHIIKEC 204
+ + ++K + C++C + GH K+C
Sbjct: 259 EVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDC 293
>gi|356553925|ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
Length = 1057
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ S+ + +I ++ TAK++WE LK +++ N + L+ ++ QGN
Sbjct: 38 ISWLYNSVFKDIISSILFANTAKEIWEDLKTRFSRKNGPRIFQLKRQLMSLQQGNDDAST 97
Query: 61 YFSGFQNLWAEYVDM-IYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ +++W E + L +Q+ E FLM L + R ++ D
Sbjct: 98 YYTKLKSVWEELSGYKPTFRCKCGGLQTLQDYIESEYVMSFLMGLNDSFAQVRGQILLSD 157
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
P + F +++EE Q ++ N I Y ++ +K + QC C
Sbjct: 158 PLPPIGNVFSLVIQEE---------AQREIVVNHIPYLNSNTMAKK---ERPQCAHCNLL 205
Query: 180 RHIVVKCAK 188
H KC K
Sbjct: 206 GHTKDKCYK 214
>gi|147816676|emb|CAN77339.1| hypothetical protein VITISV_038116 [Vitis vinifera]
Length = 400
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQ 59
M+W++ I + L+L T K++W + ++Y++ A + + + +I QG ++I
Sbjct: 29 MSWLLNLILPEISRRLRLLPTTKEIWHSVNQIYSKIGVAAQIYEPKVQIHWTEQGTMTIN 88
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
Y++ ++LW E +D+ Y V +ES AD ++ + +FL L P+ + R ++
Sbjct: 89 QYYNTMRSLWLE-LDL-YQTVEMESAADSVKLKNFLGFERLFEFLAGLNPELDQVRDQVL 146
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHW------------KSK 164
+R+ PSL + E+ R + ++ N +N I A + K++
Sbjct: 147 SREPFPSLKEAHAYVKGEDSR---RIMMLLNSSTENLIVTAPNNSALLASNSILGVPKTE 203
Query: 165 GR---DMRQVQCFSCKEYRHIVVKCAK 188
GR D + C C RH KC K
Sbjct: 204 GRKPLDRDGLWCDYCHNSRHTRDKCWK 230
>gi|147770259|emb|CAN71862.1| hypothetical protein VITISV_003938 [Vitis vinifera]
Length = 984
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKR-SHLEYEIARYSQGNLSIQ 59
M+W++ SI + TAKD+W+ + K Y++ A R L+ I Q L++
Sbjct: 205 MSWLLNSIQPEIGKPFLFLSTAKDIWDAVVKAYSKKGNATRIFELKGAIHETKQQGLNVL 264
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLM 116
+YF+ + LW E +D ++ IES D ++ E +R+ +FL LRP ++++
Sbjct: 265 SYFNKLKILWEE-LD-VHQHWEIESPRDAAKLVEIPERERIFEFLAGLRPYTQSSKPAAA 322
Query: 117 NRDLSP----SLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKS 163
+ SP L++ +K L + E L+T Q + I H KS
Sbjct: 323 GTENSPFTKDQLELLYKLLGKTEVTLSTSCAFAQ-----SGITEPVMHMKS 368
>gi|147781338|emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ +++ + ++ + TA ++WE L + ++Q N + ++ +IA Q LS+ Y
Sbjct: 89 SWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIACLRQEQLSVSAY 148
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
++ + LW E + A +Q K QFLM L Y R ++ +
Sbjct: 149 YTKLKGLWDELASY--------NAAAHGAQQDQQKLMQFLMGLNESYSVIRGQILLMNPL 200
Query: 122 PSLDVCFKELLREE-QRLATQT 142
PS+ + + +EE QRL T T
Sbjct: 201 PSVRQAYSTISQEEKQRLLTST 222
>gi|147804744|emb|CAN69359.1| hypothetical protein VITISV_024911 [Vitis vinifera]
Length = 696
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 24/204 (11%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQD-NTAKRSHLEYEIARYSQGNLSIQN 60
TW++ S++ + ++ L TAK+MW+ +K++++ D N + L ++ QG S+
Sbjct: 52 TWMLNSLEPEIAASVGLASTAKEMWDAIKEMFSNDGNNSHTFSLFQQLVDNKQGERSLPE 111
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
+F+ ++ + E+ ++ + +E+ + E FLM L + RS L+
Sbjct: 112 FFAAYRGIINEFRKLLPLSTDLET---QKHQWENLFVCGFLMNLNEQCNTHRSQLLGDST 168
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
+L F L L++ + + +A+A A GR
Sbjct: 169 MSTLQSAFSRLQSVSLTLSSPGV----DLEHSAMA-ACGRVGDTGRS------------- 210
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
V + C +C K GH + +C
Sbjct: 211 --VXNRDRSLCEFCGKQGHTVDQC 232
>gi|4773895|gb|AAD29768.1|AF076243_15 putative polyprotein [Arabidopsis thaliana]
gi|7267198|emb|CAB77909.1| putative polyprotein [Arabidopsis thaliana]
Length = 1017
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGF 65
S++ S++ +TA+++WE L+ VY N N + ++ I SQ +L +F F
Sbjct: 85 SLESSILEAYSYCETARELWETLENVYGNVSNLTRVFEVKKAINNLSQVDLEFTKHFGKF 144
Query: 66 QNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLD 125
++LWAE ++M+ + A + E EQ K L+ L P + +L+ D PSL+
Sbjct: 145 RSLWAE-LEML--RPSTVDPAILNERKEQEKVFGLLLTLNPAFNDLIKHLLRADKLPSLE 201
Query: 126 VCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVK 185
++ +E+ L + KG + + E R + V
Sbjct: 202 NVCSQVQKEQGSLGL--------------------FSGKGELITAHKGIYKGEERKVWV- 240
Query: 186 CAKKFCNYCKKPGHIIKEC 204
C++CKK GH+ +C
Sbjct: 241 -----CDHCKKKGHMKDKC 254
>gi|147821763|emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera]
Length = 994
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N L+ T K++W+ K+ Y N +NT++ + + + QG L++
Sbjct: 356 MSWLINSMTNDIGENFLLYGTTKEIWDVAKETYSNNENTSELFEVGSVLHDFRQGELAVT 415
Query: 60 NYFSGFQNLWAEYVDMIYVQ---VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ W + +D+ P + + +++ E+ + +FL+ L
Sbjct: 416 QYFNTLNRYWQQ-LDLFEEHNWSCPGDGIR-YRQIIERKRIHKFLIGL------------ 461
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
N++L + F E+ REE R Q + + A A S D +
Sbjct: 462 NKNLD---EEAFSEVRREESRKKIMMGSQDFVTNSESSALAVRGNPSNNNDHKP------ 512
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C++C++PGH C
Sbjct: 513 --------KKGRPWCDHCRRPGHTKDTC 532
>gi|4586028|gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 15/224 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ A D+W L +N N + +L EI QG +S+ Y
Sbjct: 134 SWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEY 193
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQ--EVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW + + P V+ + E++K +FL L Y R ++ +
Sbjct: 194 YTLLKTLWDQLDSTEALDDPCTCGKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKK 253
Query: 120 LSPSLDVCFKELLREEQR------LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQC 173
PSL + L ++ + +A Q +++ + I + G + + C
Sbjct: 254 ALPSLAEVYHILDQDNSQKGFFNVVAPPAAFQVSEVSHSPITSPEIMYVQSGPNKGRPTC 313
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIK----ECPTRPQNCQA 213
C HI +C KK + PG K + P +PQ A
Sbjct: 314 SFCNRVGHIAERCYKK---HGFPPGFTPKGKSSDKPPKPQAVAA 354
>gi|147819777|emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 21 TAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQ 79
TAKD+WE ++ +Y+ +N+++ L+ ++ + QG+ + Y++ LW E +D+ Y
Sbjct: 103 TAKDVWEAVRDMYSDLENSSQIFDLKSKLWQSRQGDREVTTYYNQMVTLWQE-LDLCYED 161
Query: 80 ---VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQ 136
P +S+ ++ E + FL L + R ++ R PS+ F E+ REE
Sbjct: 162 EWDCPNDSVRH-KKREENDRVYVFLAALNHNLDEVRGRILGRKPLPSIREVFSEVRREEA 220
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKK 196
R + M + I +A SKG D+ + K +C++CKK
Sbjct: 221 RRKVM-LTDPEPMSNPEIESSAL--VSKGSDLDG-------------DRRKKPWCDHCKK 264
Query: 197 PGHIIKEC---PTRPQN 210
P H C +PQN
Sbjct: 265 PWHTKGTCWKIHGKPQN 281
>gi|4678197|gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 14/205 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ A D+W L +N N + +L EI + QG LS+ Y
Sbjct: 130 SWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEY 189
Query: 62 FSGFQNLWAEYVDMIYVQVPIE--SLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW + + P +Q+ EQ+K +FL L Y R ++ +
Sbjct: 190 YTRLKTLWDQLDSTEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKK 249
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSL + L ++ QQ+ N +A AA S+ + C Y
Sbjct: 250 ALPSLGEVYHILDQDNS--------QQS--FSNVVAPPAAFQVSEITQSPSMDPTVC--Y 297
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
+ C++ + GHI + C
Sbjct: 298 VQNGPNKGRPICSFYNRVGHIAERC 322
>gi|353685490|gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
Length = 1009
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++ S+ + ++ A D+W LK Y+ + ++ S L+ +A QG L++ +
Sbjct: 297 VSWLVHSVSIPIRQSIVWMDIALDIWNDLKSRYSSGDLSRISDLQLGVASLHQGELTVTD 356
Query: 61 YFSGFQNLWAEYVDM-----------IYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYE 109
YF+ + +W E + V SL + ++ +Q+ QFL L +Y
Sbjct: 357 YFTKLRIIWDELENFRPNPVCICETKCSCFVAFTSLINQRKCEDQAM--QFLRGLNEQYL 414
Query: 110 AARSNLMNRDLSPSLDVCFKELLREEQRLATQ-TILQQNKMHDNAIA------YAAAHWK 162
+ +++ + P + F ++++E++L ++ N + N I+ + +
Sbjct: 415 NIKFHVLLMEPIPPITKKFSLVVQQERQLDNNFSVSNINSANSNRISSSVICTFCGKNGH 474
Query: 163 SKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
++ R+V F +E + KK C +C + GH I+ C
Sbjct: 475 TENVCFRKVG-FPNQENKSFKNNGNKKMCTHCGRNGHTIETC 515
>gi|147822046|emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 27 EYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVP----- 81
E LK Y + + + LE ++ SQ + SI YFS F+ LW EY+ Y +P
Sbjct: 89 EELKIRYLRSDGPRVFSLEKSLSSISQNSKSITEYFSEFKALWDEYIS--YRPIPSCRCG 146
Query: 82 ------IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREE 135
L D+ + + +FL+ L Y A RS L+ + PS+ F LL+EE
Sbjct: 147 NLNRCSCNILKDLTDRQQSDYVMKFLVGLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEE 206
Query: 136 -QRLATQTI---LQQNKM----HDNAIAYAAAHW-KSKGRDMRQVQCFSCKEYRHIVVKC 186
QR T + + M ++ + + K KG+ C C H+V KC
Sbjct: 207 SQRSLTNAVGISIDSQAMVAEQSSRTVSTSNTQFTKQKGKS--DAICSHCGYSGHLVDKC 264
Query: 187 AK--KFCNYCKKP-GHIIKECPTRPQNCQ 212
+ + K P G I PT +N Q
Sbjct: 265 FQLIGYPPRWKGPRGKIFNSTPTAAKNFQ 293
>gi|114053447|gb|AAT40537.2| hypothetical protein SDM1_3t00003 [Solanum demissum]
Length = 241
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S+ + L+ +L+ AK++W+ L Y+Q N AK L+ EI +Q NL + +Y
Sbjct: 4 SWILNSLSKDLVDSLQYVNNAKELWDKLADRYDQANGAKLYQLQREINELTQDNLDVTSY 63
Query: 62 FSGFQNLWAE 71
++ + LW E
Sbjct: 64 YTKMRKLWEE 73
>gi|2462935|emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
Length = 1131
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ A D+W L ++ N + +L EI QG++S+ +Y
Sbjct: 83 SWLLNSVSPQIYRSILRLNDAADIWRDLHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDY 142
Query: 62 FSGFQNLW--AEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW E VD + +Q+ +++K +FL L Y R ++ +
Sbjct: 143 YTTLKTLWDNLESVDEPDTPCVCGNAEKLQKKVDRAKIVKFLAGLNDSYAIIRRQIIMKK 202
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMH-----DNAIAYAAAHWKSKGRDMRQVQCF 174
+ PSL + L +++ + T + + +A A + G + + C
Sbjct: 203 VLPSLVEVYNILDQDDSQKGFSTAITPAAFNVSENVPPPMAEAGICYVQTGPNKGRPICS 262
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIK 202
C HI +C KK + PG + K
Sbjct: 263 FCNRVGHIAERCYKK---HGFPPGFVSK 287
>gi|147769841|emb|CAN63383.1| hypothetical protein VITISV_017566 [Vitis vinifera]
Length = 752
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 58 IQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKR 97
++N FSGFQ LW +Y D++Y VP+E+L+ +Q VH K+
Sbjct: 88 LRNIFSGFQTLWVDYSDIVYANVPVEALSAIQTVHNCPKK 127
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 21/32 (65%)
Query: 183 VVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
V C KKFCNYCKK GHII CP R + Q +
Sbjct: 121 VHNCPKKFCNYCKKQGHIISACPIRLERKQGT 152
>gi|449526175|ref|XP_004170089.1| PREDICTED: uncharacterized protein LOC101223363, partial [Cucumis
sativus]
Length = 428
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 52/204 (25%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + + N+ A+ +W LK+ + + N + L+ +A SQ SI
Sbjct: 136 ISWILNSVSKPISANILFSDLARTIWVELKERFQKKNAPRIFQLKRSLATLSQNQDSIDG 195
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
G FLM L + A++ L+ D
Sbjct: 196 VSRG-----------------------------------FLMGLNENFFQAQAQLLLMDP 220
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PS + LL+EEQ+ + ++ +A+A+A + SKG + S KE
Sbjct: 221 LPSTSRAYSLLLKEEQQRSIRSFASST----SAMAFAVSSNSSKGNPTNK----SRKE-- 270
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
+ C +C PGH + +C
Sbjct: 271 -------RPMCTHCNLPGHTVDKC 287
>gi|147791306|emb|CAN74499.1| hypothetical protein VITISV_013001 [Vitis vinifera]
Length = 993
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 75 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E R L
Sbjct: 135 DYYDQLRFIW----DQIDLSDPTWAXSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 190
Query: 116 MNRDLSPSLDVCFKEL-LREEQRLAT 140
+N PSLD EL LR Q L T
Sbjct: 191 LNXSXXPSLDTAVNELDLRTGQELGT 216
>gi|147774742|emb|CAN70357.1| hypothetical protein VITISV_013713 [Vitis vinifera]
Length = 1568
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 47/208 (22%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++ S++ + N L TAK +W+ K+ Y+ + ++ S
Sbjct: 306 MSWLINSMNNDIGENFLLFGTAKHIWDAXKETYSTSKNTSEVFQQLDLFETHSWKCS--- 362
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
+ A +++ EQ + +F + L + + R +M
Sbjct: 363 ----------------------DDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMGIKP 400
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHD----NAIAYAAAHWKSKGRDMRQVQCFSC 176
PSL F E+ REE R + ++ +K +A A AA + S G D +
Sbjct: 401 LPSLREAFSEVRREESR---KKVMMGSKEQPAPTLDASALAARSFNSSGGDHQ------- 450
Query: 177 KEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKKPGH + C
Sbjct: 451 --------KRDRPWCDYCKKPGHYKETC 470
>gi|147795862|emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
Length = 334
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++ SI + ++ +TA ++W L++ ++Q N ++ ++ +I + QG SI
Sbjct: 88 ISWLLNSIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISV 147
Query: 61 YFS---GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y++ F + + Y +++ L ++E E+ + QFLM L Y A R ++
Sbjct: 148 YYTKLKAFXDELSSYHEVLSCSC--GGLEKLKERDEKERVMQFLMGLNDSYAAIRGQILL 205
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
P + +L++E+++ ++ NK H +A RD + +
Sbjct: 206 MXPLPDTRXVYSLVLQQEKQVEV-SLNNGNKNHYAMLA---------DRDNKATSAHXVQ 255
Query: 178 EYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ + + C+YC + H I++C
Sbjct: 256 KQKTPL------HCSYCDRDXHSIEKC 276
>gi|224095710|ref|XP_002334734.1| predicted protein [Populus trichocarpa]
gi|222874387|gb|EEF11518.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ SI + N L++T K +W+ ++ Y + +NT++ ++ + QG+LS+
Sbjct: 42 MSWLINSITNKIGENFLLYETTKKIWDATRETYSSSENTSELFKIKAALRDLRQGDLSVT 101
Query: 60 NYFSGFQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ ++++DM + P ++ + + E+ + +FL+ L + R ++
Sbjct: 102 QYFNTLCR-HSQHLDMFEIHTWKCPKDTTL-YRRILEKKRTFKFLLGLNKYLDEVRRRII 159
Query: 117 NRDLSPSLDVCFKELLREEQR 137
++ P+L F E+ REE++
Sbjct: 160 GKNPLPNLREAFSEVRREERK 180
>gi|440577363|emb|CCI55368.1| PH01B035L11.13 [Phyllostachys edulis]
Length = 848
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 32/183 (17%)
Query: 25 MWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIES 84
+WEYL++ Y Q + + L+ E+ Q + SI ++F +LW + ++
Sbjct: 96 IWEYLRERYQQSSDVQFFSLQRELETLRQKDSSIDDFFRALASLWHQ----------LDE 145
Query: 85 LAD--VQEVHEQSKRDQ-------FLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREE 135
LA QE H+ K D+ F+ +L ++E R+ L+NR P + L EE
Sbjct: 146 LASPLYQECHQVQKADRDHLRLYDFVCRLCLEFEPVRTQLLNRSPRPIVTEALSTLRAEE 205
Query: 136 --QRLATQ---TILQQNKMHD-------NAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIV 183
+ LA Q T+L D + Y+ + S R VQC C +RH
Sbjct: 206 LHRGLAAQFVPTVLATPFFFDCTDGFCFDYSLYSGVCFGSVFAPTR-VQCNYCNNFRHDY 264
Query: 184 VKC 186
+C
Sbjct: 265 QRC 267
>gi|147780721|emb|CAN60317.1| hypothetical protein VITISV_002851 [Vitis vinifera]
Length = 975
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 38/206 (18%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D + +L+ +KT W K +Y D + + Y+I Q ++ + Y
Sbjct: 185 SVDPKIFHHLRAYKTCFKFWTQAKGLYTND-IQRFYKVVYDIVHVRQQDMDLSTYIGRIA 243
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKL-----RPKYEAARSNLMNRDLS 121
L E++ ++ P + A+ Q++ + ++F M L RPK E+ + ++
Sbjct: 244 FLKEEFLTLM----PFTNGAEAQQI----QTNKFFMVLTLIGFRPKLESVQDQILASPSV 295
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAH---WKSKGRDMRQVQCFSCKE 178
PSLD F LLR L++ L + D+++ + + +S RD Q
Sbjct: 296 PSLDDVFARLLR----LSSTQTLSTDGPSDSSVLASQTNSRGGRSGNRDRGQ-------- 343
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ C YC K GH C
Sbjct: 344 ---------RPQCTYCNKLGHTRDRC 360
>gi|147777318|emb|CAN71573.1| hypothetical protein VITISV_030365 [Vitis vinifera]
Length = 280
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N TAK++W+ K + +++NT++ +E + QGNL++
Sbjct: 85 MSWLVNSMTADIGENFLSFDTAKEIWDTAKDTFSDKENTSEIIQIEGILHDLRQGNLTVT 144
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ LW + +D V + D +++ E + +FL+ L + R +M
Sbjct: 145 EYFNTLTRLWRQ-LDTFEVH-NWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIM 202
Query: 117 NRDLSPSLDVCFKELLREEQR 137
P+L F E+ REE R
Sbjct: 203 GVKPLPNLREAFSEVRREESR 223
>gi|224119104|ref|XP_002317986.1| predicted protein [Populus trichocarpa]
gi|222858659|gb|EEE96206.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 96 KRDQFLMK-LRPKYEAARSNLMNRDLS------PSLDVCFKELLREEQRLATQTILQQNK 148
K +QF +K LRP R ++ LS PSL+ +E++ EE L L+++
Sbjct: 86 KSNQFEIKYLRPTL--VRITCISFSLSSTLGSLPSLNTAIQEIIFEETCLN----LEKSP 139
Query: 149 MHDNAIAYA-AAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTR 207
D A+A ++H KS + C +C + H+ C C YC GHI++ CPTR
Sbjct: 140 QFDIALATTRSSHQKSGNQT-----CKNCHQMGHVFATCPTIECIYCHAFGHILEHCPTR 194
Query: 208 P 208
P
Sbjct: 195 P 195
>gi|87240899|gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
Length = 1157
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S+ +S+ + H TA W+ LK+ +++ + + L I QG S+ +Y
Sbjct: 83 SWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRSTINNLKQGTKSVLDY 142
Query: 62 FSGFQNLWAEYVDMIYVQVPI-----------ESLADVQEVHEQSKRDQFLMKLRPKYEA 110
F LW D + PI ES+ + + + QFL L +
Sbjct: 143 FIELCTLW----DELNSHRPIPNCTCIHPCRCESIRLAKYYRTEDQILQFLTGLNDTFSV 198
Query: 111 ARSNLMNRDLSPSLDVCFKELLREE-QRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR 169
++ ++ D P ++ + +++EE Q + T + + A A + +G+
Sbjct: 199 VKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDDSSISVNASDARKFYPRGKGTS 258
Query: 170 QVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K+ +FC +C + H I+ C
Sbjct: 259 STSANKGKD----------RFCTFCNRYNHTIEFC 283
>gi|255591341|ref|XP_002535493.1| conserved hypothetical protein [Ricinus communis]
gi|223522917|gb|EEF26889.1| conserved hypothetical protein [Ricinus communis]
Length = 339
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 89 QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNK 148
Q+ +Q + QFLM LR ++E+ R L+++ P+LDV EL+ EE RL +L ++
Sbjct: 17 QKARDQQRLFQFLMHLRLEFESIRGQLLHKSPLPTLDVALSELIAEEIRL---RVLGSSR 73
Query: 149 MHDNAIAYAAAHWKSKGRDMRQVQCFSCKE--YRHIVVKCAKKFCNYCKKPGHIIKE 203
+ A AA +S + Q F+ ++ RH + C YC GH++K+
Sbjct: 74 SAEPATVLAAFGSRSS---CHKGQPFASRDSSSRHAFGQSIG--CRYCHAWGHMLKD 125
>gi|147825414|emb|CAN77772.1| hypothetical protein VITISV_037439 [Vitis vinifera]
Length = 1331
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 49/209 (23%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M+W++ S++ + N L TAKD+W+ K+ Y+ S +N
Sbjct: 88 MSWLINSMNNDIGENFLLFGTAKDIWDAAKETYS----------------------SSEN 125
Query: 61 YFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
FQ L D+ + A +++ EQ + +F + L + + R +M
Sbjct: 126 TSELFQQL-----DLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGQIMGI 180
Query: 119 DLSPSLDVCFKELLREEQRLATQTIL---QQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
PSL F E+ REE R + I+ +Q +A A AA + S G D RQ
Sbjct: 181 KPLPSLREAFSEVRREESR--KKVIMGSKEQPAPTLDASALAARSFNSSGGD-RQ----- 232
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
K + +C+YCKK GH + C
Sbjct: 233 ---------KRDRPWCDYCKKLGHYKEAC 252
>gi|147779660|emb|CAN64955.1| hypothetical protein VITISV_029829 [Vitis vinifera]
Length = 1368
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 19 HKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNYFSGFQNLWAE--YVDM 75
H AKD+W+ +++ Y++ A + + +E + QG+ ++ Y + LW E + +
Sbjct: 58 HLMAKDIWDAIQQTYSKARDAAQVYEVEVKTIAAKQGSKTVTEYANQLNALWQELDHYRV 117
Query: 76 IYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKE---LL 132
I + P E A +++ EQ + FL+ L P+++ R ++ + P CF E L+
Sbjct: 118 IKTKCP-EDAAILKDFIEQDRVYDFLVGLNPEFDQVRIQILGKQEVP----CFNEVXALI 172
Query: 133 REEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCN 192
R ++ + ++++ + + D + A + +G + ++ +C
Sbjct: 173 RGKE--SRRSVMXEPQTLDGSTLVAKTEYSXQGXNNLPKHLGRDNXWKE---NKDNLWCT 227
Query: 193 YCKKPGHIIKEC---PTRPQNCQ 212
+CKKP H ++C +P +C+
Sbjct: 228 FCKKPRHTKEKCWKLNGKPPSCE 250
>gi|147856623|emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
Length = 1261
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TWI + S+ L AK W+ L K Y+ + + + L E+ + Q SI
Sbjct: 75 LTWIRNTSIPSISNLLGSFDDAKSAWDMLTKRYSTTHGSMKYQLVVELHQLRQEPGQSIN 134
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNL 115
+Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E R L
Sbjct: 135 DYYDQLRFIW----DQIDLSDPTWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQL 190
Query: 116 MNRDLSPSLDVCFKEL 131
+NR +PSLD EL
Sbjct: 191 LNRSPAPSLDTAVNEL 206
>gi|147854017|emb|CAN81288.1| hypothetical protein VITISV_036901 [Vitis vinifera]
Length = 520
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 121 SLKEQFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 173 PSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 TRGRGQRPHCTYCNKLGHTRDRC 237
>gi|147768776|emb|CAN60456.1| hypothetical protein VITISV_019554 [Vitis vinifera]
Length = 1552
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTW++ S+++ + N + T +++WE + ++Y+ + +S + +E+ BL
Sbjct: 29 MTWLVNSMEEDISCNYMCYPTTQELWENVNQMYS--DLGNQSQI-FELTLKLDLBL---- 81
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
F+ ++ W D ++ ++ E ++ +FL L +++ R ++ R
Sbjct: 82 -FNTYE--WKSAEDRLH----------HKKXMEDNRIFKFLAGLNVEFDEVRGRIIGRQP 128
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PS+ F E+ REE R + ++ K +A + + G +V F CK
Sbjct: 129 LPSIGEVFSEVRREESR---RNVMLGKK--GPGVAIEGSALVTTGGGYNKVXAFQCKSDE 183
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
V +C++C KP H + C
Sbjct: 184 RPRV-----WCDFCNKPRHTRENC 202
>gi|147766660|emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
Length = 1171
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 39/169 (23%)
Query: 44 LEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---- 99
++ EIA + Q LSI Y++ ++LW E LA + +++DQ
Sbjct: 135 IQREIAYHRQEQLSISVYYTKLKSLWDE-------------LASYNDASSGAQQDQQRLM 181
Query: 100 -FLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREE-QRLATQT------------ILQ 145
FLM L Y A R ++ + PS+ + + +EE QRL + T ++
Sbjct: 182 QFLMGLNKSYSAIRGQILLMNPLPSVRQAYSSVCQEEKQRLLSATHTAAESNSSLAMAVR 241
Query: 146 QNKMHDNAIAYAAAHWKSK--------GRDMRQVQCFSCKEYRHIVVKC 186
N+M +N++ A + + G + QC C E RH V KC
Sbjct: 242 SNQMKNNSVGNARSDRSDRLYSDKRRSGSSRGRPQCTYCGEMRHFVEKC 290
>gi|147835935|emb|CAN59737.1| hypothetical protein VITISV_018174 [Vitis vinifera]
Length = 331
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M ++ S++ + L+ T K +W+ +Y N N +K L + QG+L +
Sbjct: 29 MAXLINSMEPEISQGYILYNTTKXIWDAANLMYSNLGNDSKLYELSEKARTIQQGDLLVM 88
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
YF+ L+ E Y D+++ +E A ++ E+ + +FL LR +++ R ++
Sbjct: 89 AYFNSLNILYXEIDLYQDIVWXN--LEDHATYLKLIEKERVFKFLSXLRYEFDQERGRIL 146
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+ PSL F + REE R+ ++ + + A + A+ + G + + S
Sbjct: 147 SSSPIPSLREVFNLIRREESRIGFMMSGLKSTTAETS-ALSTANQPTAGN--KNIGANSV 203
Query: 177 KEYRHIVVKCAKK-------FCNYCKKPGHIIKEC---PTRPQNC 211
++ K A K +C++C+KP H C RP N
Sbjct: 204 ----YVAGKNAGKKDDKDSLWCDHCQKPRHTRDSCLKIHGRPANL 244
>gi|147819437|emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
Length = 660
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+M SI + + +L A D+WE LK Y +++ + LE ++ SQ + S+
Sbjct: 98 LSWLMNSIAKEIYGSLLYFTNAFDIWEELKIRYLRNDGPRVFSLEKSLSSISQNSKSVTE 157
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
YFS F+ LW EY+ PI + S R Q L++ S L
Sbjct: 158 YFSEFKALWDEYISY----RPISNCRCGNFNRCSSIRSQLLLQ---------SPL----- 199
Query: 121 SPSLDVCFKELLREE-QRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PS+ F LL+EE QR T + + ++ A A + + S
Sbjct: 200 -PSMSRVFSLLLQEESQRSLTNAV----GISIDSQAMVAE---------QSSRTVSTSNT 245
Query: 180 RHIVVKCA-KKFCNYCKKPGHIIKEC 204
R I K C++C GH++ +C
Sbjct: 246 RFIKQKGMFDAICSHCGYSGHLVDKC 271
>gi|147857967|emb|CAN80367.1| hypothetical protein VITISV_014719 [Vitis vinifera]
Length = 1573
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 41/225 (18%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 318 SVDPKILLHLRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDVDLSTYIGQIV 376
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLR-----PKYEAARSNLMNRDLS 121
+L E++ ++ + + DV + ++++ D+F M L P E R ++
Sbjct: 377 SLKEEFLTVMPLTI------DVGD--QRTQIDKFFMVLTLIGLCPDLETVRDQILGSSSI 428
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT+ N D+++ + + + GR Q
Sbjct: 429 PSLDDVFVRLLRIS---STQTLPSDN-TSDSSMLVSQTNSRG-GRSGNQ----------- 472
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC---------PTRPQNCQASQAV 217
+ + C YC K GH C T P + SQ +
Sbjct: 473 --GRGQRPHCTYCNKLGHTRDRCYQLHGRPSHTTHPPSSATSQGI 515
>gi|3695393|gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
rvp.hmm, score: 11.80) [Arabidopsis thaliana]
Length = 1244
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ A D+W + ++ N + +L EI + QG+LS+ Y
Sbjct: 115 SWLLNSVSPQIYRSILRMNDATDIWRDIYGRFHMTNLPRTYNLTQEIQDFRQGSLSLSEY 174
Query: 62 FSGFQNLWAEYVDMIYVQVPIES-----LADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
++ + LW + +D + P + + +Q+ E++K +FL L Y R ++
Sbjct: 175 YTQLRILW-DLLDS--TEEPDDPCTCGKVLRLQQKAERAKTVKFLAGLNESYSIVRRQII 231
Query: 117 NRDLSPSLDVCFKELLRE------EQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQ 170
+ PSL + L ++ ++ Q +K+ A+ + ++ R
Sbjct: 232 AKKALPSLVEVYNILDQDYSQKGFSTNVSPPAAFQVSKISSTALTPKICYVQNGPNKGRP 291
Query: 171 VQCFSCKEYRHIVVKCAKKFCNYCKKPGH--IIKECPTRPQNCQA 213
+ C C + HI KC KK + PG + E T+PQ A
Sbjct: 292 I-CSFCNKVGHIAEKCYKK---HGYPPGFKGKLPEKGTKPQPVAA 332
>gi|147855496|emb|CAN83856.1| hypothetical protein VITISV_014673 [Vitis vinifera]
Length = 352
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASXIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLRIS---STQT-LTSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPQCTYCNKLGHTRDRC 253
>gi|8778880|gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 29/211 (13%)
Query: 5 MGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSG 64
+G +D SL L + + +W + N N +R LE + QG L + YF+
Sbjct: 97 LGFVDGSL-LRPSVDDSTFRIWSRCNSMVN--NLPRRYQLEQAVMTLQQGKLDLSTYFTK 153
Query: 65 FQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
+ LW + + V + + ++ E E S+ QFLM L + RS + N
Sbjct: 154 KKTLWEQLANTKSRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPR 213
Query: 122 PSLDVCFKELLREE-QRL-----------ATQTILQQNKMHD-NAIAYAAAHWKSKGRDM 168
P L+ + L ++E QRL + Q ++D N I A ++K
Sbjct: 214 PGLNEIYNMLDQDESQRLVGFAAKSVPSPSPAAFQTQGVLNDQNTILLAQGNFK------ 267
Query: 169 RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGH 199
+ +C C H V KC K + PGH
Sbjct: 268 -KPKCTHCNRIGHTVDKCYKV---HGYPPGH 294
>gi|147846215|emb|CAN79489.1| hypothetical protein VITISV_033370 [Vitis vinifera]
Length = 747
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 21 TAKDMWEYLKKVYNQDN-TAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQ 79
TAK++W + + Y++ TA+ L+ +I QG+ SI Y++ Q+LW E +++
Sbjct: 14 TAKEIWYAISQTYSKIGITAQIYELKCQIHATKQGSWSITKYYNKLQSLWLELDHYQHIE 73
Query: 80 VPI-ESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRL 138
+ + E ++++ EQ + +FL L P+ + R + ++ PS+ + ++ EE
Sbjct: 74 MVVAEDTTRLKKIMEQERVFEFLAGLNPELDQVRVQKLGKEPLPSIREVYAYVIGEES-- 131
Query: 139 ATQTILQQNKMHDNAIAYAAAHWKSKG 165
++ + ++A+A A ++KS G
Sbjct: 132 ------HRDTLENSALA-TAGNFKSMG 151
>gi|413956656|gb|AFW89305.1| hypothetical protein ZEAMMB73_651094 [Zea mays]
Length = 536
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYN-QDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +TA +W+ L +Y+ + N ++ + Q ++
Sbjct: 116 VAWLLASMSPTVSKRVEAMRTASQIWKTLSNIYSRKGNVMVMMEIQNKADAVKQMGRPVE 175
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVH---EQSKRDQFLMKLRPKYEAARSNLM 116
Y S Q LW E Y + + D Q VH E + FL L ++E+ R+
Sbjct: 176 QYASELQQLWGELDH--YAPLQMVCPQDAQMVHKWVEDRRVTHFLKNLDSEFESRRAVFC 233
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+++ P++D ++ EE RL + + H K + +C++C
Sbjct: 234 HQESLPTMDEVVSAMIDEESRL--------------RVMSSGNHVKPAYVAIEDRECYNC 279
Query: 177 KEYRHIVVKC 186
E H+ C
Sbjct: 280 GERGHLSYNC 289
>gi|77551557|gb|ABA94354.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 882
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQD-NTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S+ ++ ++ +A +MW+ L +Y+++ N + +I+ QG S+
Sbjct: 103 VAWLLTSLIPAIATTVETISSASEMWKTLTNLYSREGNVMLMVETQEKISVLRQGERSVA 162
Query: 60 NYFSGFQNLWA--EYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW+ ++ + + ++ P + +A +++ E+ + +FL L ++E R+ + +
Sbjct: 163 EYVAELKHLWSDLDHYNPLGLEHP-DCIAKMRKWIERRRVIEFLKGLNSEFEGRRNAMFH 221
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ P+LD + +E+ + + +L + Y A K +CF+C
Sbjct: 222 QTTLPTLDEAIAAMAQEKLK---KKVLPSATPSSPSPTYVVAQSKE------TRECFNCG 272
Query: 178 EYRHIVVKC 186
+ H++ C
Sbjct: 273 KMGHLIRDC 281
>gi|147818978|emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera]
Length = 1970
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147794669|emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
Length = 685
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 44 LEYEIARYSQG-NLSIQNYFSGFQNLWAEYVDMIYVQVPIESL--------ADVQEVH-E 93
L+ IA+ Q ++S+ Y+ LW E ++ P+ S A + + E
Sbjct: 98 LKTSIAKCEQSKSMSVTTYYGKLNVLWEE----LFKHEPLISCTCCSSCTAASLHQARCE 153
Query: 94 QSKRDQFLMKLRPK-YEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDN 152
Q K FLM L Y R+N++++D PSLD ++ ++++E+ + + +
Sbjct: 154 QEKLHDFLMGLNTDLYAQLRTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTKDKPAEVL 213
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
A + +G+ R V C CK+ H C + C +C K GH C
Sbjct: 214 GFAVRTGAGRGRGKTERPV-CSHCKKTGHETSTCWSLVACPHCHKHGHDKNNC 265
>gi|147853845|emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]
Length = 971
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N + TAK++W+ ++ Y N DNT+ +EI Q ++
Sbjct: 89 MSWLINSMTNDIGENFMYYGTAKEIWDATRETYSNIDNTSTI----FEIKSILQ---DLR 141
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
N+ ++++ + P + L ++V E+ +FL+ L + R +++
Sbjct: 142 QEIQLLPNILISLHELVW-KCPEDGLL-YKKVIEKEHIYKFLLGLNKNLDEVRGRVLSIK 199
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PS+ F ++ REE R Q + + A A +S + +
Sbjct: 200 PLPSVREVFSKIRREESRQKVMLGTQNSSKNLENSALVARGTQSNNNNHQ---------- 249
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC-----------PTRPQNCQASQAVVAS 220
K + +C++C+KPGH + C P+RPQ + + A+
Sbjct: 250 ----TKKNRPWCDHCRKPGHTKETCWHLHGKPADWKPSRPQQNREGRGYTAT 297
>gi|224057808|ref|XP_002299334.1| predicted protein [Populus trichocarpa]
gi|222846592|gb|EEE84139.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 113 SNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA-HWKSKGRDMRQV 171
++L++R P+LD ELL EE LA + N +A+ +S +D
Sbjct: 8 ASLLHRSPLPTLDQAITELLSEETHLAPRKPTPIN------VAFTTVKEPQSNNKDQS-- 59
Query: 172 QCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTR 207
+KK CNYCKKPGHI+ ECP R
Sbjct: 60 ------------YGSSKKICNYCKKPGHILLECPIR 83
>gi|346318384|gb|EGX87987.1| zinc knuckle transcription factor (CnjB), putative [Cordyceps
militaris CM01]
Length = 487
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 172 QCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECPTRP 208
+CFSC E H +C CNYCK+PGH+ KECPT+P
Sbjct: 64 KCFSCGEEGHRKFECPNAPQMTCNYCKEPGHMAKECPTKP 103
>gi|147768773|emb|CAN60453.1| hypothetical protein VITISV_019551 [Vitis vinifera]
Length = 941
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 11 SLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLW 69
+LI N T K +W+ + Y + +BT++ L + R QGN S++ +++ Q LW
Sbjct: 104 TLIGNFIRFPTTKLVWDAIXXTYFDGNBTSQVYELRRRVTRLQQGNGSLEKFYTELQGLW 163
Query: 70 AEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNRDLSPSLDV 126
E +D + P+E D+ ++ + D FL L + + RS+++ PS++
Sbjct: 164 WE-IDFRHPN-PMERATDIYHYNKLLQEDHVYTFLDGLDDRLDNIRSDVLQMRPFPSIEQ 221
Query: 127 CFKELLREEQRLATQTILQQNKMHD 151
+ + RE R A + N D
Sbjct: 222 AYAHVRREALRQAVMSTSDPNNTSD 246
>gi|147853125|emb|CAN78557.1| hypothetical protein VITISV_010019 [Vitis vinifera]
Length = 1348
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 30/199 (15%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYF 62
W++G +D SLI N AK +W+ + Y +AR QG+ S++ Y+
Sbjct: 79 WLIGLMDPSLIGNFIQFPMAKQVWDAIATTYFDG-----------MARLRQGSGSLEKYY 127
Query: 63 SGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNRD 119
+ Q LW + +D P++ D+Q + + D+ FL L + RS+++
Sbjct: 128 NDLQGLWRD-IDFRRPN-PMQCPTDIQYFNNILQEDRVYTFLDGLDDNIDNIRSDVLQLK 185
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHW----------KSKGRDMR 169
P+++ + + RE R Q ++ N + + AA KSKG
Sbjct: 186 PFPTVEQAYAHVRREAVR---QAVMTANDGEEAGPSTAANSLSLNGKFNSISKSKGPS-N 241
Query: 170 QVQCFSCKEYRHIVVKCAK 188
++C C +H C K
Sbjct: 242 DMKCSHCGNSKHTRDTCFK 260
>gi|400598610|gb|EJP66319.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 446
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRP 208
R +CFSC E H C A C YCK+PGH+ KECPT+P
Sbjct: 33 RDDKCFSCGEEGHRKFDCPNAAPMTCRYCKEPGHMAKECPTKP 75
>gi|147816137|emb|CAN62065.1| hypothetical protein VITISV_030911 [Vitis vinifera]
Length = 1113
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYF 62
WI+ S+ + + +L TA +W L+ + N L+ + QG L I Y+
Sbjct: 937 WIINSVSKDIANSLMYITTAVGIWTNLRNHFRHSNAPXVFQLKKHLITLQQGALDINTYY 996
Query: 63 SGFQNLWAEYVDMIYVQVPIESLADVQ---EVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+ F+ LW E + + +P D+Q E +Q QFLM L Y R ++ +
Sbjct: 997 TRFKVLWEELKN--FQPLPAFHCGDLQALLEYQQQENVIQFLMGLNDSYAQTRGQILMME 1054
Query: 120 LSPSLDVCFKELLR 133
P L K LLR
Sbjct: 1055 PLPPLS---KVLLR 1065
>gi|147805214|emb|CAN66627.1| hypothetical protein VITISV_025008 [Vitis vinifera]
Length = 770
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ +++ + ++ + T ++WE L + ++ N + ++ +IA Q L + Y
Sbjct: 89 SWIVNTLNPEIADSVIYYSTTHEVWEDLCERFSHSNAPRIFEIQRDIACLRQEQLFVSAY 148
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
++ + LW E + A +Q K QFLM L Y A R ++ +
Sbjct: 149 YTKLKGLWDELASY--------NAAXHGAQQDQQKLMQFLMDLNESYSAIRGQILLMNPL 200
Query: 122 PSLDVCFKELLREE-QRLATQT 142
PS+ + + +EE Q L T T
Sbjct: 201 PSVRQAYSSVSQEEKQHLLTLT 222
>gi|147833118|emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
Length = 987
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ S+ + + ++ H+T ++W L + ++Q + + ++ +I ++QG +
Sbjct: 91 ISWLSNSVCKEIAESILYHETTIEIWNDLYERFHQGSGPRIFEIKQKILAHTQGLAYVNT 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLMN 117
Y++ ++LW E + + +P+ + ++ E +R+ QFL+ L + R+ ++
Sbjct: 151 YYTRQKSLWDELRE--FKAIPVCNCGGMRVYMEDQQRESVMQFLLGLNESFAPIRAQILL 208
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAA---AHWKSKGRDMRQVQCF 174
+P L+ F +++EE+ Q++ N+ A+ A + +++ R
Sbjct: 209 MKPTPPLNKVFSLVVQEER--------QRSLTISNSPAFTAPVSSRFQAASRASSPTNSS 260
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
++ R C +C GH + C
Sbjct: 261 RSRKDR--------PLCTHCNILGHTVDRC 282
>gi|147857574|emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
Length = 1131
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W++ SI + ++ +T ++W L++ ++Q N ++ ++ +I + QG SI
Sbjct: 85 ISWLLNSIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISV 144
Query: 61 YFSGFQNLWAEYVDMIYV-QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
Y++ + W E V L ++E+ E+ + QFLM L Y A R ++
Sbjct: 145 YYTKLKAFWDELSSYHEVLSCSCGGLEKLKEMDEKERVMQFLMGLNDSYAAIRGQIL 201
>gi|147790732|emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]
Length = 956
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 104 SVDPKILLHLRAYKTCFKFWTQAKGLYMND-IQRLYKVASAIVHISQQDLDLFTYIGQIA 162
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 163 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLILIGLRPDLEPVRDQILGSSSV 214
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 215 PSLDDVFARLLRIS---STQT-LSFDSTSDSSVLVS--------------QTSSRGGRSG 256
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 257 TRGRGQRPHCTYCNKLGHTRDRC 279
>gi|147769782|emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
Length = 1240
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ S+ + + ++ H+T ++W L + ++Q + + ++ +I ++QG +
Sbjct: 91 ISWLSNSVCKEIAESILYHETTIEIWNDLYERFHQGSGPRIFEIKQKILAHTQGLAYVNT 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLMN 117
Y++ ++LW E + + +P+ + ++ E +R+ QFL+ L + R+ ++
Sbjct: 151 YYTRQKSLWDELRE--FKAIPVCNCGGMRVYMEDQQRESVMQFLLGLNESFAPIRAQILL 208
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAA---AHWKSKGRDMRQVQCF 174
+P L+ F +++EE+ Q++ N+ A+ A + +++ R
Sbjct: 209 MKPTPPLNKVFSLVVQEER--------QRSLTISNSPAFTAPVSSRFQAASRASSPTNSS 260
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
++ R C +C GH + C
Sbjct: 261 RSRKDR--------PLCTHCNILGHTVDRC 282
>gi|224070778|ref|XP_002303232.1| predicted protein [Populus trichocarpa]
gi|222840664|gb|EEE78211.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 72/209 (34%), Gaps = 52/209 (24%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNL-SIQ 59
+TW + ++ + + +AK++W++L Y A L + QG+ S+
Sbjct: 72 ITWFCNTSIPAIHIQFADYDSAKEIWDFLANRYQTTGLAHYYQLWTTLHSLKQGSSQSVN 131
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + Q +W + S A++ E H ++ + R +N D
Sbjct: 132 DFLAQVQPIWNQI-----------SQANISEDHLHLIQEIIFEETR----------LNLD 170
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
SP D+ Q+ QT C +C +
Sbjct: 171 KSPQFDIALATTWSSHQKFGNQT------------------------------CKNCHQM 200
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
H C C YC GHI++ PTRP
Sbjct: 201 GHAFATCPTVECRYCHAFGHILEHYPTRP 229
>gi|147865854|emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]
Length = 1403
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 196 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 254
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 255 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 306
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 307 PSLDDVFARLLRIS---STQT-LPSDXASDSSVLVS--------------QTTSRGGRSG 348
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 349 TRGRGQRPHCTYCNKLGHTRDRC 371
>gi|147772908|emb|CAN64580.1| hypothetical protein VITISV_002159 [Vitis vinifera]
Length = 1453
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQ 59
M W+ S+ + TAKD+W+ +++ Y++ A + H ++ + QG+ +I
Sbjct: 149 MAWLWNSMIPEISDTCMFLATAKDIWDAIQQTYSKARDAAQVHEVKVKTIAAKQGDKTIT 208
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW E + +I + P ++ A +++ EQ + FL+ L P+++ ++
Sbjct: 209 EYANQLKSLWQELDHYRVIKTKCPXDA-AILKDFIEQDRVYDFLVGLNPEFDQVXIQILG 267
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+ CF E++ ++ L N + ++ A A + +M +V
Sbjct: 268 KQEV----XCFNEVVALIXGXESRRCLMLNPQNTDSSAMVAGSGNNSATNMERV--LVSG 321
Query: 178 EYRHIVVKCAKK------FCNYCKKPGHIIKEC 204
R K + +C YCKK H + C
Sbjct: 322 NGRSSQPKTQNRDYKDNLWCTYCKKARHTRERC 354
>gi|147819451|emb|CAN74286.1| hypothetical protein VITISV_036410 [Vitis vinifera]
Length = 1262
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|224074047|ref|XP_002304229.1| predicted protein [Populus trichocarpa]
gi|222841661|gb|EEE79208.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 73/209 (34%), Gaps = 52/209 (24%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNL-SIQ 59
+TW + ++ + + +AK++W++L Y A L + QG+ S+
Sbjct: 72 ITWFCNTSIPAIHIQFADYDSAKEIWDFLANRYQTTGLAHYYQLWTTLHSLKQGSSQSVN 131
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + Q +W + S A++ E H ++ + R +N D
Sbjct: 132 DFLAQVQPIWNQI-----------SQANISEDHLHLIQEIIFEETR----------LNLD 170
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
SP D+ Q+ + QT C +C +
Sbjct: 171 KSPQFDIALATTWSSHQKFSNQT------------------------------CKNCHQM 200
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
H C C YC GHI++ PTRP
Sbjct: 201 GHAFATCPTVECRYCHAFGHILEHYPTRP 229
>gi|147832329|emb|CAN75516.1| hypothetical protein VITISV_021838 [Vitis vinifera]
Length = 996
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 43/203 (21%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ L+ +KT W K +Y D I ++ + ++ + Y
Sbjct: 78 SVDPKILHYLRAYKTCFKFWTQAKGLYTND-----------IQQFYK-DMDLSTYIGQIV 125
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKL-----RPKYEAARSNLMNRDLS 121
+L E++ ++ P + A+ Q++ + D+F M L RP E+ R ++
Sbjct: 126 SLKEEFLTLM----PFTNDAETQQI----QTDKFFMALILIGLRPDLESVRDQILASPSV 177
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT+ + +AY + + + QC S
Sbjct: 178 PSLDDVFVRLLRLS---STQTLSTNGPSDSSVLAYQINSRGRRSGNRSRGQCPS------ 228
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
C YC K GH C
Sbjct: 229 ---------CTYCNKLGHTRDRC 242
>gi|147818045|emb|CAN76032.1| hypothetical protein VITISV_040150 [Vitis vinifera]
Length = 1152
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q++ D+F M LRP E+ R ++
Sbjct: 137 SLKEEFLTVM----PLTPDVGAQQI----XLDKFFMVLTLIGLRPDLESIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147809553|emb|CAN71207.1| hypothetical protein VITISV_030632 [Vitis vinifera]
Length = 902
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Query: 21 TAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQ 79
TAKD+W+ +++ Y + +N ++ ++ + + QG+ + Y++ LW + +D+ +
Sbjct: 110 TAKDVWDAIRETYFDIENASQNFEIKTRLWQMKQGDQEVTEYYTEMLGLWQD-LDLSCEE 168
Query: 80 VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLA 139
++ E + +FL L + + RS +++R PS+ F E+ REE R+
Sbjct: 169 DCTRDSVRFKKKMENERVFEFLAGLNCELDNIRSRVLSRRPLPSIREVFSEVRREESRIV 228
Query: 140 TQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGH 199
L + + + +G + + + + +C +CKK GH
Sbjct: 229 MLD-LSFGREGSTLLTHGPPAVVGRGPHVAASGPHAAGSSGPSPRQSKRTYCEHCKKLGH 287
Query: 200 IIKEC 204
C
Sbjct: 288 TKDTC 292
>gi|147804904|emb|CAN62614.1| hypothetical protein VITISV_028123 [Vitis vinifera]
Length = 1102
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 34 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 92
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 93 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 144
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 145 PSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 186
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 187 TRGRGQRPHCTYCNKLGHTRDRC 209
>gi|51038185|gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 3 WIMGSIDQSLI-LNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W+ GS+ +++ + ++ +TA+D+W + ++ + + +L +E +QGNL I +Y
Sbjct: 88 WLFGSVSDAILDVAMEPDQTARDLWVSIDDIFQANKEPRAIYLSHEFHSMTQGNLPIADY 147
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADV-QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
V+ +++L DV V E L L ++ + N+ +
Sbjct: 148 CQK-------------VKTAVDALRDVGHPVSESQLVLNLLSGLNSRFSSTADNIAGAPV 194
Query: 121 SPSLDVCFKELLREEQRLATQTILQ 145
PS LL +E RLA + +Q
Sbjct: 195 LPSFASARNTLLLKELRLANEHKVQ 219
>gi|147856033|emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
Length = 2172
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 792 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 850
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 851 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 902
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 903 PSLDDVFARLLRIS---STQT-LPSDSASDSSMLVS--------------QTTSRGGRSG 944
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 945 TRGRGQRPHCTYCNKLGHTRDRC 967
>gi|147807416|emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera]
Length = 1212
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 32/198 (16%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q++ + D+F M LRP E+ R ++
Sbjct: 137 SLKEEFLTVM----PLTPDVGAQQI----QLDKFFMVLTLIGLRPDLESIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGH 199
+ + C YC K GH
Sbjct: 231 TRGRGQRPHCTYCNKLGH 248
>gi|147775813|emb|CAN75922.1| hypothetical protein VITISV_030752 [Vitis vinifera]
Length = 1214
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 121 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSL+ F LLR +++ L + D+++ + Q S
Sbjct: 173 PSLNDVFARLLR----ISSTQTLPSDSTSDSSVLVS--------------QTTSRGGRSG 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 TRGRGQRPHCTYCNKLGHTRDRC 237
>gi|147777505|emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
Length = 2077
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + Y+I Q ++ + Y
Sbjct: 273 SVDPKILHHLRAYKTCFKFWTQAKGLYTND-IQRFYKVVYDIVHVRQQDMDLSTYIGRIA 331
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ +E+ +Q + D+F M LRP E R ++
Sbjct: 332 SLKEEFLTLMPFTNGVEA--------QQIQTDKFFMVLTLIGLRPDLEYVRDQILASSSV 383
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 384 PSLDDVFARLLRLS---STQTL 402
>gi|147781743|emb|CAN61179.1| hypothetical protein VITISV_032292 [Vitis vinifera]
Length = 1237
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTXIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ C YC K GH C
Sbjct: 231 TRGRGQHPHCTYCNKLGHTRDRC 253
>gi|147784156|emb|CAN77225.1| hypothetical protein VITISV_002211 [Vitis vinifera]
Length = 1605
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 42 SHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQ 99
S +E + + QG S+ Y++ W + +D+ + A +++ EQ + +
Sbjct: 379 SMVESALHDFRQGEQSVTQYYNTLTRYWQQ-LDLFETHSWKCSDDAATYRQIVEQKRLFK 437
Query: 100 FLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTIL---QQNKMHDNAIAY 156
F + L + R +M PSL F E+ REE R + I+ +Q + A
Sbjct: 438 FFLGLNRELNDVRGRIMGIKPLPSLKEAFSEVRREESR--KKVIMGSKEQPAPTLDGSAL 495
Query: 157 AAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
AA + S G D RQ K + +C+YCKKPGH + C
Sbjct: 496 AARSFNSSGGD-RQ--------------KRDRPWCDYCKKPGHYKEAC 528
>gi|147860166|emb|CAN78715.1| hypothetical protein VITISV_030863 [Vitis vinifera]
Length = 1228
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + I SQ +L + Y
Sbjct: 78 SVDPRILLHLRAYKTCFKFWTQAKGLYTNDIQCLYK-VASAIVHISQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLR----ISSTQTLPSDSTSDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTHDRC 253
>gi|147774740|emb|CAN70355.1| hypothetical protein VITISV_013711 [Vitis vinifera]
Length = 862
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ ++ + N L+ T K++W+ ++ Y N +NT++ +E + QG+LS+
Sbjct: 90 MSWLINLMNTDIGENFLLYGTTKEIWDAARETYSNFENTSEIFEIEATLHDLRQGDLSVT 149
Query: 60 NYFSGFQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLR 105
YF+ W +++DM V P E A Q++ EQ + +FL+ L+
Sbjct: 150 QYFNILSCHW-QHLDMFEVHTWKCP-EDTALYQKIVEQKRTFKFLLGLK 196
>gi|5306241|gb|AAD41974.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1100
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 19/183 (10%)
Query: 22 AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVP 81
A D+W L +N N + +L EI QG LS+ Y++ + LW +
Sbjct: 94 ASDIWRDLNSRFNMTNLPRTYNLTQEIQDLRQGTLSLSEYYTRLKTLWDQLDST------ 147
Query: 82 IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQ 141
E L D +++K +FL L Y R ++ + + PS L E + Q
Sbjct: 148 -EELDDPCTRQKRAKIVKFLAGLNESYAIIRRQIIAKKILPS--------LAEVYHIVDQ 198
Query: 142 TILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHII 201
QQ N +A AA S+ + Y + C++C + GHI
Sbjct: 199 DNSQQG--FSNVVARPAAFQVSEVTITNSID--PTIYYVQNGPNKGRSMCSFCNRVGHIA 254
Query: 202 KEC 204
+ C
Sbjct: 255 ERC 257
>gi|147785838|emb|CAN73074.1| hypothetical protein VITISV_032386 [Vitis vinifera]
Length = 1195
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 121 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 173 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 TRGRGQRPHCTYCNKLGHTRDRC 237
>gi|147865929|emb|CAN80975.1| hypothetical protein VITISV_039739 [Vitis vinifera]
Length = 274
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQD--NTAKRSHLEYEIARYSQGNLSIQ 59
TW++ S++ + TAKD+W+ ++ N D N ++ + ++ QG S+
Sbjct: 109 TWLINSMEPMISRRYLFLPTAKDVWDTPRRT-NSDLGNASQVFKIPSKLKEMKQGTKSVT 167
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQ--EVHEQSKRDQFLMKLRPKYEAARSNLMN 117
YF+ Q+ W E V + + + + +V+ ++ E+ + FL L + R ++++
Sbjct: 168 QYFTDLQDSWQELV-LFLEEDSVCATCNVKQRQILEKERVYDFLAGLNRGLDEVRGHILS 226
Query: 118 RDLSPSLDVCFKELLREEQR 137
R P+ + F E+ REE+R
Sbjct: 227 RLPFPTTEEAFAEVHREEKR 246
>gi|147818439|emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
Length = 1409
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D L+ N AK +W+ + Y + +T++ L+ + R Q SI+
Sbjct: 103 WLINSMDPKLVSNFIXFSXAKAVWDNIAITYFDGTDTSQVYDLKRRVTRLKQEGGSIETX 162
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P+E D+Q+ + + D+ FL L + + R++++
Sbjct: 163 YNNLQGLWRE-IDFRRPN-PMECDIDIQKYNSILQEDRVYTFLDGLDDRLDKIRADVLQI 220
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNK 148
P+++ + ++ RE+ R Q+++ N+
Sbjct: 221 QPFPTVEQAYAQVRREDLR---QSVMMMNE 247
>gi|449455340|ref|XP_004145411.1| PREDICTED: uncharacterized protein LOC101209213 [Cucumis sativus]
Length = 620
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNYF 62
++ S++ + L TAKD+W+ + +Y++ A R + L ++ QG + + ++F
Sbjct: 157 LINSMEPQIGKPLLFAATAKDIWDTAQTLYSKRQNASRLYTLRKQVHECKQGTMDVTSFF 216
Query: 63 SGFQNLWAEYVDMIYVQVPIESLADVQ--EVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
+ +W E +D+ V + VQ + E + FL L PK++ R ++
Sbjct: 217 NKLSLIWQE-MDLCRELVWRDPTDGVQYSRIEENDRIYDFLAGLNPKFDVVRGQILGHRS 275
Query: 121 SPSLDVCFKELLREEQRLATQTI 143
PSL E+ EE R + I
Sbjct: 276 IPSLMKVCSEIRLEEDRTSAMNI 298
>gi|147811660|emb|CAN65969.1| hypothetical protein VITISV_020934 [Vitis vinifera]
Length = 575
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q VA+
Sbjct: 297 EEQLFVAT 304
>gi|147838713|emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]
Length = 1240
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 93 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 151
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 152 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 203
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F L R L+TQT L + D+++ + Q S
Sbjct: 204 PSLDDVFARLPR---LLSTQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 245
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 246 TRGRGQRPHCTYCNKLGHTRDRC 268
>gi|147825392|emb|CAN62266.1| hypothetical protein VITISV_025647 [Vitis vinifera]
Length = 1254
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT +W K +Y D + + SQ +L + Y
Sbjct: 62 SVDPKILLHLRAYKTCFKLWTQAKGLYTND-IQRLYKVASANVHISQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ + +P+ Q Q++ D+F M LRP E R ++
Sbjct: 121 SLKEEFL----IVMPLTPDVGAQ----QTQLDKFFMVLTLXGLRPDLEPVRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 173 PSLDDVFARLLRIS---STQTL 191
>gi|147778997|emb|CAN60312.1| hypothetical protein VITISV_036303 [Vitis vinifera]
Length = 509
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V M+ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRMLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLST---ISLTELLHSLEAVEQRRLMRQGDTAEGAFQVRMQKNAGHKNGKVNNNKSCGN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147843218|emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera]
Length = 1181
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 38 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 96
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 97 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 148
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 149 PSLDDVFVRLLRIS---STQTV 167
>gi|147779017|emb|CAN62535.1| hypothetical protein VITISV_041880 [Vitis vinifera]
Length = 1314
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPFRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 189 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDXC 253
>gi|4309765|gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1664
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ + S++ SL+ +TAK++WE L V+ NQ N ++ ++ I SQG++
Sbjct: 71 LALLQNSLEASLLEAYSYCETAKELWETLFNVFGNQSNLSRVFEVKKAINDLSQGDMEFT 130
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+F F++LWAE ++M+ + + E EQ K L+ L Y +L+ D
Sbjct: 131 QHFGKFRSLWAE-LEMLRPNTLDPKV--LIERREQDKVFGLLLTLSSTYNDLIKHLLRAD 187
Query: 120 LSPSL-DVC 127
P+L +VC
Sbjct: 188 KLPNLEEVC 196
>gi|147794801|emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
+I++ ++ +++ KT + W K++++ N + LE E+ +Q +L+I YF +
Sbjct: 72 TIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRDLTIAQYFHKVK 131
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDV 126
L E + + ++ PI E + + LRP++ + + PSL V
Sbjct: 132 TLCRE-ISELDLEAPI---------GETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSL-V 180
Query: 127 CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV-------QCFSCKEY 179
F+ LL ++ LA Q K + A+ W S +R+ +C +
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKGGWNSXQHTVRRTKKNEDKAKCSQGERS 240
Query: 180 RHIV-----VKCAKKF---CNYCKKPGHIIKEC 204
+ KKF C C K GH+ K+C
Sbjct: 241 ARVEGDSKNPGTXKKFEGKCYNCXKKGHMAKDC 273
>gi|147787257|emb|CAN60333.1| hypothetical protein VITISV_033283 [Vitis vinifera]
Length = 130
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D SL++N + TAK +W+ Y + +T++ L ++R Q SI+ Y
Sbjct: 39 WLINSMDHSLVVNFXXYPTAKQVWDSAATTYFDGTDTSQVYELRCHVSRMKQAGGSIEKY 98
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVH 92
++ LW E +D + P+ D+Q H
Sbjct: 99 YNNLHGLWQE-IDFHRLN-PMACAIDIQNYH 127
>gi|147774908|emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]
Length = 1236
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L Y
Sbjct: 60 SVDPRILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASTIVHISQQDLDPSTYIGQIV 118
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 119 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 170
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 171 PSLDDVFARLLRIS---STQTL 189
>gi|357473101|ref|XP_003606835.1| Arginine decarboxylase [Medicago truncatula]
gi|355507890|gb|AES89032.1| Arginine decarboxylase [Medicago truncatula]
Length = 815
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 70 AEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFK 129
+E D+ P+ S V V+ S+RDQFLMK ++E R L+N + PSLD+C +
Sbjct: 572 SEGADISGASDPLLSSIVVCNVYNTSRRDQFLMKFHHEFEVVRVALLNMNYVPSLDICVE 631
Query: 130 EL 131
++
Sbjct: 632 KM 633
>gi|147768125|emb|CAN71652.1| hypothetical protein VITISV_017444 [Vitis vinifera]
Length = 887
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S++ + TAK + + + Y+ N+++ L+ +I +QGN+S+
Sbjct: 92 LAWLVNSMEPEISQTYMHLSTAKQLLDVVNDTYSDLGNSSQVYELKTKIRNTTQGNMSVT 151
Query: 60 NYFSGFQNLWAEYVDMIYVQ--VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
+Y++ ++LW E +D+ Y E A Q E+ + +FL L + R ++
Sbjct: 152 SYYNMLKSLWQE-LDLFYDLEWSCAEDSAQYQRTVEKDRVMEFLAGLNTDLDEVRGRVLG 210
Query: 118 RDLSPSLDVCFKELLREEQR 137
++ P + F E+ REE R
Sbjct: 211 KESLP-ISKAFSEVRREESR 229
>gi|313184289|emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
Length = 1390
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 3 WIMGSIDQSLILNLKLH-KTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQN 60
W++ S++ + I+ +H +TAK++WE + + Y + + ++ L+ + R Q +
Sbjct: 89 WLINSMEPA-IMGFFIHLRTAKEVWEEVARTYYDGSDISQIYELKVKSFRLRQEGRQVGV 147
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMN 117
Y++ +++W E ++ +E D + + E+ + D+ FL+ L ++ RS+++
Sbjct: 148 YYADLKSVWQELDQRRPIK--MECAVDFKTLREEIQLDRVYAFLVGLDDVFDKVRSDILR 205
Query: 118 RDLSPSLDVCFKELLREEQRLAT 140
PS++ F + RE QR AT
Sbjct: 206 TQPLPSVEEVFSVVRREAQRHAT 228
>gi|294888505|ref|XP_002772499.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239876725|gb|EER04315.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 2269
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 168 MRQVQCFSCKEYRHI----VVKCAKKFCNYCKKPGHIIKECPT-RPQNCQASQAVVAS 220
M QV+C C Y + V+ CAK C+ C PGH+ + CP+ +PQ Q + + +S
Sbjct: 719 MSQVRCDKCGLYHDVAPNPVLHCAKAICHRCSAPGHLCRACPSPKPQRGQPREQLPSS 776
>gi|9758772|dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
gi|26450382|dbj|BAC42306.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis thaliana]
Length = 357
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S+ + + ++ A ++W+ L ++ N + L +I QGN+S+ +Y
Sbjct: 135 SWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGNMSLSDY 194
Query: 62 FSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW + V + + V+E SK +FL L Y RS ++ +
Sbjct: 195 YTTLKTLWDDLDGASCVNTCRNCKCCSATASVNEHSKIVKFLAGLNDFYSTIRSQIIMKK 254
Query: 120 LSPSLDVCFKELLRE--EQRLATQ---------TILQQNKMHDNAIAYAAAHWKSKGRDM 168
P L + L ++ ++ + T +IL +++ NA + K K
Sbjct: 255 TIPDLAEIYNLLDQDHSQRNIVTNPTNASAFNVSILSNDQIAVNATRSFQPNSKPK---- 310
Query: 169 RQVQCFSCKEYRHIVVKCAK 188
VQC C H C K
Sbjct: 311 --VQCSHCGYTGHTADTCYK 328
>gi|449458922|ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216505 [Cucumis sativus]
Length = 907
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 76/204 (37%), Gaps = 52/204 (25%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + + N+ A+ +W LK+ + + N + L+ + G L
Sbjct: 136 ISWILNSVSKPISANILFSDLARTIWVELKERFQKKNAPRIFQLKRSLTSLQLGRLPSDG 195
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
G FLM L + A++ L+ D
Sbjct: 196 VSRG-----------------------------------FLMGLNENFFQAQAQLLLMDP 220
Query: 121 SPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
PS + LL+EEQ+ + ++ +A+A+A + SKG + S KE
Sbjct: 221 LPSTSRAYSLLLKEEQQRSIRSFASST----SAMAFAVSSNSSKGNPTNK----SRKE-- 270
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
+ C +C PGH + +C
Sbjct: 271 -------RPMCTHCNLPGHTVDKC 287
>gi|147778587|emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]
Length = 1257
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIV 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + +E+ +Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVMPLTPDVEA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LLR L++ L + D+++ + Q S
Sbjct: 189 SSLDDVFARLLR----LSSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147838570|emb|CAN74310.1| hypothetical protein VITISV_037517 [Vitis vinifera]
Length = 1266
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 87 SVDPKILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 145
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ + + + + +Q++ D+F M LR E R ++
Sbjct: 146 SLKEEFLTVMPLTLDVGA--------QQTQLDKFFMVLTLIGLRLDLEPVRDQILGSSSV 197
Query: 122 PSLDVCFKELLR 133
PSLD F LLR
Sbjct: 198 PSLDDVFARLLR 209
>gi|147780148|emb|CAN60057.1| hypothetical protein VITISV_039053 [Vitis vinifera]
Length = 384
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 78 SVDPKILHHLRPYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + Q + + D+F M LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTTDVGDQRI----QIDKFFMILTLIGLRPDLETVRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LLR +TQT L + D+++ + + + +GR Q
Sbjct: 189 SSLDDVFARLLRIS---STQT-LSSDNTSDSSMLVSQTNSR-EGRSGNQG---------- 233
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + +C YC K GH C
Sbjct: 234 ---RGQRPYCTYCNKLGHTCDRC 253
>gi|294866685|ref|XP_002764811.1| hypothetical protein Pmar_PMAR004034 [Perkinsus marinus ATCC 50983]
gi|239864558|gb|EEQ97528.1| hypothetical protein Pmar_PMAR004034 [Perkinsus marinus ATCC 50983]
Length = 2024
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 168 MRQVQCFSCKEYRHI----VVKCAKKFCNYCKKPGHIIKECPT-RPQNCQASQAVVAS 220
M QV+C C Y + V+ CAK C+ C PGH+ + CP+ +PQ Q + + +S
Sbjct: 567 MSQVRCDKCGLYHDVAPNPVLHCAKAICHRCSTPGHLCRACPSPKPQRGQPREQLQSS 624
>gi|338729303|ref|XP_001505024.3| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 170
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+KK C C KPGH+ +ECPT
Sbjct: 123 KDCTQVKCYRCGETGHVAINCSKKNKVNCYRCGKPGHLARECPT 166
>gi|147767220|emb|CAN62449.1| hypothetical protein VITISV_044204 [Vitis vinifera]
Length = 571
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 106 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 164
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 165 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 212
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 213 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGN 269
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAVV 218
++ C CK+ H KC CN C K GH+ + C + Q + + AVV
Sbjct: 270 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQ--EETNAVV 325
>gi|147792456|emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
Length = 1253
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +K W K +Y D + I SQ +L + Y
Sbjct: 62 SVDPRILLHLQAYKXCFKFWTQAKGLYTND-IQXLYKVASAIVHLSQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 121 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR L++ L + D+++ + Q S
Sbjct: 173 PSLDDVFARLLR----LSSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 TRGRGQRPHCTYCNKLGHTRDRC 237
>gi|224058609|ref|XP_002299564.1| predicted protein [Populus trichocarpa]
gi|222846822|gb|EEE84369.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 71/209 (33%), Gaps = 52/209 (24%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
+TW + ++ + + +AK++W+ L Y A L + QG + S+
Sbjct: 72 ITWFRNTSVPAIHIQFADYDSAKEIWDLLANRYQTTGLAHYYQLWTTLHSLKQGSDQSVN 131
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + Q +W + S A++ E H ++ + R +N D
Sbjct: 132 DFLAQVQPIWNQI-----------SQANISEDHLHLIQEIIFEETR----------LNLD 170
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
SP D+ Q+ QT C +C +
Sbjct: 171 KSPQFDIALVTTRSSHQKFGNQT------------------------------CKNCHQM 200
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
H C YC GHI++ CPTRP
Sbjct: 201 GHAFATYPTVECRYCHAFGHILEHCPTRP 229
>gi|147866085|emb|CAN84135.1| hypothetical protein VITISV_000113 [Vitis vinifera]
Length = 1323
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLXVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR L++ L D+++ + + R
Sbjct: 189 PSLDDVFARLLR----LSSTQTLPSASASDSSVLVSHTTSRGGRSGTRGRG--------- 235
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ C YC K GH C
Sbjct: 236 -----QRPHCTYCNKLGHTRDRC 253
>gi|147812205|emb|CAN68854.1| hypothetical protein VITISV_000898 [Vitis vinifera]
Length = 559
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLST---ISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|218199595|gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
Length = 964
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKT-AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W+ G+I L+ ++ H T A+ +W L+ + + A+ L E + QG+LS+
Sbjct: 229 LSWMYGTISTDLLESVMTHTTTARLVWRSLEHQFLGNREARALDLNAEFYNFQQGDLSVT 288
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIE----SLADVQEVHEQSKRDQFLMKLR---PKYEAAR 112
+Y + + A+ D V P+ +LA +Q HE Q +R P + R
Sbjct: 289 DYCRHLKAMAADLAD---VGEPVGDRTLTLATIQGFHENFAHLQSAFTMRKPFPSFAEVR 345
Query: 113 SNLM------NRDLSPS 123
S L+ NR +P+
Sbjct: 346 SQLLLDELTKNRSRTPA 362
>gi|224098535|ref|XP_002334548.1| predicted protein [Populus trichocarpa]
gi|222873215|gb|EEF10346.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEI----ARYSQGNL 56
M+W+ SI + TAKD+W+ ++++Y++ K + L YEI ++ QGN+
Sbjct: 72 MSWLWNSIMPEVCGPYMFLVTAKDIWDAVRQIYSK---VKDAALIYEIKMKLSKTKQGNM 128
Query: 57 SIQNYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSN 114
+ Y++ ++ W E Y +Q E ++ E+ + +FL L +++ R
Sbjct: 129 MVIEYYNIMKSFWLELDYYQDFKMQCS-EDAVILKNYVERERIFEFLAGLNIEFDQMRVQ 187
Query: 115 LMNRDLSPSLDVCFKELLREEQR 137
++ ++ PSL+ F + EE R
Sbjct: 188 ILGKESMPSLNKVFSVIRAEEGR 210
>gi|147766535|emb|CAN69688.1| hypothetical protein VITISV_026774 [Vitis vinifera]
Length = 1382
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 274 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 332
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q + D+F M L P E R ++
Sbjct: 333 SLKEQFLTVM----PLTPDVGAQ----QMQLDKFFMVLTLIGLHPDLEPIRDQILGSSSV 384
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR L++ L + D+++ + Q S
Sbjct: 385 PSLDDVFARLLR----LSSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 426
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 427 TRGRGQRPHCTYCNKLGHTRDRC 449
>gi|147767251|emb|CAN71273.1| hypothetical protein VITISV_019661 [Vitis vinifera]
Length = 1276
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+ + +KT W K +Y D + + I Q ++ + Y
Sbjct: 78 SVDPKILLHFRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++++ D+F M LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTT--DVGD--QRTQIDKFFMVLTLIGLRPDLETVRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQN 147
PSLD F LLR +TQT+ N
Sbjct: 189 PSLDDVFARLLRIS---STQTLPSDN 211
>gi|147771575|emb|CAN67009.1| hypothetical protein VITISV_004754 [Vitis vinifera]
Length = 1237
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S++ + N L AKD+W+ K+ Y + +NT++ +E + + QG S+
Sbjct: 88 MSWLINSMNNDIGENFLLFGXAKDIWDAAKETYSSSENTSELFQVESALHDFRQGEQSVT 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y++ +++ EQ + +F + L + + R +
Sbjct: 148 QYYNTL----------------------TRQIVEQKRLFKFFLGLNRELDDVRGRIXGIK 185
Query: 120 LSPSLDVCFKELLREEQR 137
PSL F E+ EE R
Sbjct: 186 PLPSLREAFSEVRXEESR 203
>gi|147766575|emb|CAN76224.1| hypothetical protein VITISV_017232 [Vitis vinifera]
Length = 674
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 78 SVDPKILLHLRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++++ D+F M LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTT--DVGD--QRTQIDKFFMVLTLIGLRPDLETVRDQILGSSSI 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 189 PSLDDVFAHLLR----ISSTQTLSSDNTSDSSVLVS--------------QTNSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 NRGRGQRPHCTYCNKLGHTRDWC 253
>gi|296081554|emb|CBI20077.3| unnamed protein product [Vitis vinifera]
Length = 1050
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W++ S++ ++ TAKD+W+ +++ Y+ N + ++ ++ QG+ S+
Sbjct: 639 MAWLINSMETAIGQTYLFLPTAKDLWDEVQETYSDLGNATQMFEIKTKLKDIKQGSHSVT 698
Query: 60 NYFSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
Y++ N W E + +M + E A ++ E+ + FL L + + R ++
Sbjct: 699 QYYNILPNAWQELDLFSNMEWKCA--EDNAHYCKILEKERAFDFLAGLNKELDEVRGQIL 756
Query: 117 NRDLSPSLDVCFKELLREEQR 137
++ PS+ F E+ RE+ R
Sbjct: 757 GKEPLPSVREIFSEVRREKSR 777
>gi|147822140|emb|CAN77046.1| hypothetical protein VITISV_035257 [Vitis vinifera]
Length = 1478
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 318 SVDPXILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 376
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M L P E R ++
Sbjct: 377 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLXPDLEPIRDQILGSSSV 428
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 429 PSLDDVFARLLRIS---STQTL 447
>gi|147857655|emb|CAN83079.1| hypothetical protein VITISV_024674 [Vitis vinifera]
Length = 595
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147819165|emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
Length = 1246
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
+ W++ S++ ++ + TAKD+WE ++ +Y+ +N+++ L+ ++ + QG+ +
Sbjct: 71 IAWLINSMEPAIGKSHLFLPTAKDVWEXVRDMYSDLENSSQIFXLKSKLWQSRQGDREVT 130
Query: 60 NYFSGFQNLWAEYVDMIYV---QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
Y++ LW E +D+ Y P +S+ + FL L + R ++
Sbjct: 131 TYYNQMVTLWQE-LDLCYEDEWDCPNDSVRHKKREENDXVYYVFLAGLNHNLDEVRGXIL 189
Query: 117 NRDLSPSLDVCFKELLREEQR 137
R PS+ F + REE R
Sbjct: 190 GRKPLPSIREVFSXVRREEAR 210
>gi|147790209|emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI S+ ++ + H T+ W L+ +++ + A+ L E+ +G++S+ +
Sbjct: 96 LSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKGSMSMID 155
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQE-VHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y ++ ++ ++LA + E V EQ + L L Y A + + RD
Sbjct: 156 Y-------------IMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRD 202
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQ 146
SL+ LL E RL Q+ ++Q
Sbjct: 203 DKISLEAIHSMLLAFEHRLEQQSSIEQ 229
>gi|147797476|emb|CAN64673.1| hypothetical protein VITISV_007430 [Vitis vinifera]
Length = 1079
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDPKILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q+ H D+F M LRP E R ++
Sbjct: 121 SLKEEFLTVM----PLTPDVGAQQTH----LDKFFMVLTLIGLRPDLEPVRDQILGSSSV 172
Query: 122 PSLDVCFKELLRE 134
PSLD K L E
Sbjct: 173 PSLDDFLKLALEE 185
>gi|147785726|emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
Length = 1248
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQ 59
M W+ S+ + TAKD+W +++ Y++ A + + ++ + QG+ ++
Sbjct: 23 MAWLWNSMILEISDTCMFLATAKDIWNAIQQTYSKARDAAQVYEVKVKNVAAKQGDKTVT 82
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
Y + ++LW E + +I + P E A +++ EQ + FL+ L P+++ R ++
Sbjct: 83 EYANQLKSLWQELDHYRVIKTKCP-EDAAILKDFIEQDRVYDFLVGLNPEFDQVRIQILG 141
Query: 118 R-DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV 171
+ ++S CF E++ +R ++ L N + ++ A A + +M +V
Sbjct: 142 KQEVS-----CFNEVVALIRREESRRCLMLNPQNTDSSAMVAGSGNNSATNMERV 191
>gi|147775979|emb|CAN73455.1| hypothetical protein VITISV_003293 [Vitis vinifera]
Length = 581
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK Y D + + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKGEYKGDERIRNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + Q L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKIV-----------QQILVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKMNNNKPCNN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|8927258|gb|AAF82028.1|AF208027_1 gag protein [Human immunodeficiency virus 2]
Length = 509
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 149 MHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECP 205
++ A+ +AAA K+ G+ ++C++C + H V +C ++ C C KPGHI+ +CP
Sbjct: 373 LNPTALPFAAAQQKTGGKR-STIKCWNCGKEGHTVRQCRAPRRQGCWKCGKPGHIMAKCP 431
Query: 206 TR 207
R
Sbjct: 432 ER 433
>gi|147838635|emb|CAN65056.1| hypothetical protein VITISV_012379 [Vitis vinifera]
Length = 471
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y +N + + I SQ +L + Y
Sbjct: 68 SVDPKILLHLRAYKTCFKFWTQAKGLYT-NNIQRLYKVASAIVHISQQDLDLSTYIGQIA 126
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 127 SLKEEFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPVRDQILGSSSV 178
Query: 122 PSLDVCFKELLR--EEQRLATQTI 143
SLD F L R Q L + +I
Sbjct: 179 LSLDDVFARLFRISSTQTLPSDSI 202
>gi|147788526|emb|CAN65302.1| hypothetical protein VITISV_002195 [Vitis vinifera]
Length = 581
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + ++ +
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDV-V 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147781105|emb|CAN64972.1| hypothetical protein VITISV_025928 [Vitis vinifera]
Length = 570
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEVVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|224142115|ref|XP_002324404.1| predicted protein [Populus trichocarpa]
gi|222865838|gb|EEF02969.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 53/234 (22%)
Query: 4 IMGSIDQSLILNLKLH----KTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQ 59
I+G+I+ +L + H T+ W L+ ++ + A+ + Y++ +G+ S+
Sbjct: 88 ILGAINSTLTEKMLTHVIRCTTSISAWTTLETLFTSQSRARTMQVHYQLTILKKGSSSVA 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-KLRPKYEAARSNLMNR 118
+YF FQ+L +SLA V + + FL+ LRP Y+ +++ R
Sbjct: 148 DYFQRFQSL-------------TDSLATVGQPLNGFEMVAFLLVGLRPDYDPFVTSVTTR 194
Query: 119 DLSPSLDVCFKELLREEQRL------------------ATQTILQQNKMHDNAIAYAAAH 160
S++ + LL E RL + ++ N+I A
Sbjct: 195 VEPLSVEEIYGHLLFHELRLEHHYSAIDLSVTGAHYAACGGNSFRPHRSSHNSILGAPPT 254
Query: 161 WK----------SKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ S+GR R F + ++ C C + GHI +C
Sbjct: 255 GRGPSRPYFNRQSRGRG-RNTHSFPGRG------SSSRPVCQVCNRVGHIALDC 301
>gi|125570667|gb|EAZ12182.1| hypothetical protein OsJ_02065 [Oryza sativa Japonica Group]
Length = 404
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++GS++ + L++ +++ MW L++ Y N A + E Q + ++ +F
Sbjct: 184 LVGSMEVDISLDIAGLASSELMWTRLRQQYEPRNDAMFLAVVNEAQSLRQLDATVDEFFR 243
Query: 64 GFQNLWAEYVDMIYVQV-PIESLADVQEVHEQSKRD-QFLMKLRPKYEAARSNLMNRDLS 121
+W + +D+ V + Q V ++ R +FL LRP++E R+ L+ R
Sbjct: 244 KMSTVWRQ-MDLQGADVCRTCTCCQRQRVQTETTRLYEFLSHLRPEFEPVRAQLLARRPR 302
Query: 122 PSLDVCFKELLREEQR 137
PSL EL EE R
Sbjct: 303 PSLLETLPELRAEETR 318
>gi|147781731|emb|CAN69747.1| hypothetical protein VITISV_016320 [Vitis vinifera]
Length = 634
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 62 SVDPKILLHLRAYKTCFKFWNQAKGLYTND-IQRLYKVTSSIVNVRQQDMDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++++ D+F M LRP E R ++
Sbjct: 121 SLKEEFLTVM----PLST--DVGD--QRTQIDKFFMVLTLIGLRPDLETVRDQILGSSSV 172
Query: 122 PSLDVCFKELLREE 135
PSLD F LL +
Sbjct: 173 PSLDDVFARLLLSQ 186
>gi|147770954|emb|CAN76244.1| hypothetical protein VITISV_023380 [Vitis vinifera]
Length = 454
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 63 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 121
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 122 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 169
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 170 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNACHKNGKVNNNKSCGN 226
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQ 209
++ C CK+ H KC CN C K GH+ + C + Q
Sbjct: 227 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQ 275
>gi|158578602|gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
Length = 937
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 14/198 (7%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ A D+W L ++ N + +L EI QG++S+ +Y
Sbjct: 120 SWLLNSVSPHIYRSILRLIDAADIWRDLSSRFHMSNLPRIFNLAKEIQDLRQGSMSLLDY 179
Query: 62 FSGFQNLWAEYVDMIYVQVPIES-----LADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
++ + LW ++ + P E +Q E++K +FL L Y+ R ++
Sbjct: 180 YTTLKTLWD---NLESSEEPGEPCTCGRATQLQLKAERAKIVKFLASLNESYDIIRRQII 236
Query: 117 NRDLSPSLDVCFKELLREEQRLA-----TQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV 171
+ PSL + L + + + T Q +K D A + S R +
Sbjct: 237 MMKVLPSLTEVYNILDQNDSQRGFSNNTPPTSFQVSKSEDPEDQAAICYVTSGANKGRPI 296
Query: 172 QCFSCKEYRHIVVKCAKK 189
F C HI +C +K
Sbjct: 297 YSF-CNRVGHIAERCYRK 313
>gi|147819265|emb|CAN68965.1| hypothetical protein VITISV_031258 [Vitis vinifera]
Length = 570
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + ++ +
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDV-V 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147776237|emb|CAN63185.1| hypothetical protein VITISV_000411 [Vitis vinifera]
Length = 577
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDLKILLHLRAYKTCFKFWTRAKGLYTND-IQRLYKVASVIVHISQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 121 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPVRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQ 146
PSLD F +L EE + + ++Q
Sbjct: 173 PSLD-DFLKLALEEAAVVPEVYMEQ 196
>gi|147797712|emb|CAN76346.1| hypothetical protein VITISV_024039 [Vitis vinifera]
Length = 571
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147797842|emb|CAN71931.1| hypothetical protein VITISV_013418 [Vitis vinifera]
Length = 670
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPKILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLR-----PKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M L P E R ++
Sbjct: 137 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLCPDLEPVRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR TQT L + D+++ + Q S
Sbjct: 189 PSLDDVFVRLLRIS---FTQT-LPFDSTSDSSVLVS--------------QTNSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTHDRC 253
>gi|147772049|emb|CAN66753.1| hypothetical protein VITISV_036089 [Vitis vinifera]
Length = 573
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKMNNNKPCSK 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147770077|emb|CAN72134.1| hypothetical protein VITISV_028721 [Vitis vinifera]
Length = 485
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLST---ISLTELLHSLEAVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|340726666|ref|XP_003401675.1| PREDICTED: hypothetical protein LOC100647915 [Bombus terrestris]
Length = 536
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 28/150 (18%)
Query: 98 DQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTI-LQQNKMHDNA--- 153
D L+++ Y A + +++ D+SP+ D KE+L +E + I L + ++ +N
Sbjct: 332 DPDLIRVATPYRTAEARVVHIDISPTADE-IKEILAQEGGCKVEDIQLGEIRISENGLGS 390
Query: 154 ------------------IAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKK-----F 190
+ + K + + R +QCF C E H+ C K
Sbjct: 391 VWMRCPVEAVRKLIQLGKVTIGRSRAKIEAIEQRPLQCFRCLEIGHVKKSCTSKENREHL 450
Query: 191 CNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
C C PGH+ KEC C ++ AS
Sbjct: 451 CYRCGIPGHLAKECTAAKPKCPLCKSRGAS 480
>gi|147799478|emb|CAN68461.1| hypothetical protein VITISV_037728 [Vitis vinifera]
Length = 472
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 21 TAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQV 80
T KD + KV + A+ + +I Q ++ + Y +L E++ ++
Sbjct: 51 TPKDAITDVDKVQRKKIDAQLCSVVSDIVHVRQQDMDLSTYIGQIASLKEEFLTLM---- 106
Query: 81 PIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLSPSLDVCFKELLR-- 133
P + A+ Q++ + D+F M LRP E+ R ++ PSLD F LLR
Sbjct: 107 PFTNGAEAQQI----QTDKFFMVLTLIGLRPDLESVRDQILASPSVPSLDDVFARLLRVS 162
Query: 134 EEQRLATQTILQQNKM--HDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC 186
Q L+T + + N+ + +W GR R QC C + H +C
Sbjct: 163 STQTLSTDGPSDSSVLASQTNSRGGRSGNW---GRGQRP-QCTYCNKLGHTRDRC 213
>gi|2961349|emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana]
Length = 1109
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 38/69 (55%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +ID L+ N+ A+D+WE ++K ++ N K ++ ++A Q ++++
Sbjct: 88 VSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEG 147
Query: 61 YFSGFQNLW 69
Y+ +W
Sbjct: 148 YYGKLNKIW 156
>gi|126542351|gb|ABO16607.1| gag protein [Feline immunodeficiency virus]
gi|134284768|gb|ABO69463.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E+VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIKAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + K+K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQARVQQVQVKAK 374
Query: 165 GRDMRQ----VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
GR ++ ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GRKLQNRGGPLKCFNCGKVGHMAKNCRAPKRCNKCGKSGHISTDC 419
>gi|147767056|emb|CAN69872.1| hypothetical protein VITISV_032285 [Vitis vinifera]
Length = 843
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M+W+ S+ + TAK++WE + Y++ + A+ L+ I QG LS+
Sbjct: 158 MSWLWNSMQSDISRTCMFLSTAKEIWESVCHTYSKVRDAAQMYELKTRIHNTKQGILSVT 217
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADV-QEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y++ ++LW E +++ A + QE E+ + FL L + + R + +
Sbjct: 218 KYYNVIKSLWLELDQYQNLRMKCNIDATMHQEFIERERVYDFLAGLNVELDQVRVQIFGK 277
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV 171
+ PSL+ F ++R E+R + + N M + +A + R M Q
Sbjct: 278 EPLPSLNKAFA-IVRGEERRRNIMLEKGNTMDRSVLAISKPSGNEVLRLMLQT 329
>gi|20043011|gb|AAM08819.1|AC090486_29 Putative retroelement [Oryza sativa Japonica Group]
gi|110288882|gb|ABB47173.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1265
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 171 VQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQ 212
++C++C E+ H +V+C K C CK GHI CPT +C+
Sbjct: 244 IKCYNCGEFGHHLVRCTKPSLCYVCKSSGHISSHCPTMMGSCK 286
>gi|20303616|gb|AAM19043.1|AC099774_5 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1259
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 171 VQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQ 212
++C++C E+ H +V+C K C CK GHI CPT +C+
Sbjct: 244 IKCYNCGEFGHHLVRCTKPSLCYVCKSSGHISSHCPTMMGSCK 286
>gi|147784654|emb|CAN65932.1| hypothetical protein VITISV_016257 [Vitis vinifera]
Length = 498
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASVIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LLR +TQT L + D+++ + Q S
Sbjct: 189 SSLDDVFARLLRIS---STQT-LPSDSASDSSVLVS--------------QTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147856699|emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI S+ ++ + H ++ W L+K+++ + A+ L E +G++S+ +
Sbjct: 93 LSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQSTKKGSMSMID 152
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQE-VHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y ++ V+ +SLA + E V EQ + L L Y A + + R+
Sbjct: 153 Y-------------IMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIRE 199
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQ 146
SL+ LL EQRL Q ++Q
Sbjct: 200 DKISLEAVHSMLLAFEQRLEQQGSIEQ 226
>gi|218184311|gb|EEC66738.1| hypothetical protein OsI_33081 [Oryza sativa Indica Group]
Length = 801
Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 171 VQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQ 212
++C++C E+ H +V+C K C CK GHI CPT +C+
Sbjct: 344 IKCYNCGEFGHHLVRCTKLSLCYVCKSSGHISSHCPTMMGSCK 386
>gi|147765955|emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI S+ ++ + H ++ W L+K+++ + A+ L E +G++S+ +
Sbjct: 93 LSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQSTKKGSMSMID 152
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQE-VHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y ++ V+ +SLA + E V EQ + L L Y A + + R+
Sbjct: 153 Y-------------IMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIRE 199
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQ 146
SL+ LL EQRL Q ++Q
Sbjct: 200 DKISLEAVHSMLLAFEQRLEQQGSIEQ 226
>gi|30103001|gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1393
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 16/188 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W+M S+ S+ ++ + A +W+ L +Y + N + ++ Q ++Q
Sbjct: 108 VSWLMTSVAPSIGRMIEAIQNAAVVWKTLSNMYSGEGNVMMMVEAQNKVENLKQEGRTVQ 167
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKR-DQFLMKLRPKYEAARSNLMNR 118
Y S Q LWA+ +Q+ E + Q +R FL L ++E R+ + ++
Sbjct: 168 EYASELQQLWADLDHYDPLQLKHEDDIVIGNKWLQRRRVIHFLKGLNKEFEDRRAAMFHQ 227
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
P+++ +++EE RL + + N + AY AA D R +C++C +
Sbjct: 228 ATLPTMEEAISAMVQEEMRL--RLMRGTNPIRS---AYIAA-------DNR--ECYNCGQ 273
Query: 179 YRHIVVKC 186
H+ C
Sbjct: 274 VGHVSYNC 281
>gi|147834993|emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
Length = 992
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQG-NLSIQ 59
++WI +ID + L + AK +WE+LK+ Y N + L+ IA+ Q ++S+
Sbjct: 71 VSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMSVT 130
Query: 60 NYFSGFQNLWAE 71
Y+ LW E
Sbjct: 131 TYYGKLNVLWGE 142
>gi|297737422|emb|CBI26623.3| unnamed protein product [Vitis vinifera]
Length = 1940
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 792 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 850
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 851 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 898
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 899 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNNKSCGN 955
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAVV 218
++ C CK+ H KC CN C K GH+ + C + Q + + AVV
Sbjct: 956 NQKNGVFPPCPHCKKTNHSPKKCWWRPDVKCNKCGKQGHVERICKNQQQ--EETNAVV 1011
>gi|147805321|emb|CAN69620.1| hypothetical protein VITISV_008603 [Vitis vinifera]
gi|147841281|emb|CAN62417.1| hypothetical protein VITISV_038422 [Vitis vinifera]
Length = 570
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNEKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147826995|emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 40/234 (17%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ SI +++ ++ +T+ ++W L+K++ D+ A+ L + + +G LSI +
Sbjct: 89 LSWILASIFEAMYGHVVNCQTSTEVWSVLEKLFVSDSKARTLQLRFMLQSLKKGALSIND 148
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y +N+ A+ + VP E L L L P++E N+ +R
Sbjct: 149 YVLKMRNI-ADMLSTSGKPVPYEDLILY-----------ILGGLGPEFETIVVNITSRSE 196
Query: 121 SPSLDVCFKELLREEQRL-------------ATQTILQ--QNKMHDNAIAYAAAHWKSKG 165
+ SL L E RL A TI QN ++ +++ +
Sbjct: 197 AISLQEVHYLLQSHEIRLEQLSVASVIDVPPAAHTITGGVQNSNTNDGQFRGSSNRNFRP 256
Query: 166 RDMRQVQCFS-----CKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQNCQAS 214
R++R Q C + H +KC F Y + P R QN Q S
Sbjct: 257 RNVRNPQTSRIVYQLCGKMGHTAMKCFHHFDVYFQS--------PPRAQNQQFS 302
>gi|222612615|gb|EEE50747.1| hypothetical protein OsJ_31080 [Oryza sativa Japonica Group]
Length = 676
Score = 44.7 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 171 VQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQ 212
++C++C E+ H +V+C K C CK GHI CPT +C+
Sbjct: 236 IKCYNCGEFGHHLVRCTKPSLCYVCKSSGHISSHCPTMMGSCK 278
>gi|147768613|emb|CAN67165.1| hypothetical protein VITISV_037677 [Vitis vinifera]
Length = 571
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A +WEYLK Y D + + E+EI + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAKIWEYLKGEYKGDERIRNMQVMNLIREFEIKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTTEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147820205|emb|CAN73586.1| hypothetical protein VITISV_033961 [Vitis vinifera]
Length = 230
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 8 IDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQN 67
+D ++ +L+++KT W K +Y D + Y I Q ++ + Y +
Sbjct: 39 VDPKILHHLRVYKTCFKFWTQAKGLYTNDIQQFYKAVFY-IVHVRQQDMDLFTYIGRIAS 97
Query: 68 LWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLSP 122
L E++ ++ P + A+ Q++ + D+F M LRP ++ R ++ P
Sbjct: 98 LKEEFLTLM----PFTNGAEAQQI----QTDKFFMVLTLIGLRPDLQSVRDQILASPSVP 149
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHI 182
SLD F LL RL++ L + D+++ + Q S
Sbjct: 150 SLDDVFTHLL----RLSSTQTLSTDGPSDSSVLAS--------------QTNSRGGRSGN 191
Query: 183 VVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 192 RGRGQRPQCTYCNKLGHTRDRC 213
>gi|147798588|emb|CAN74390.1| hypothetical protein VITISV_023272 [Vitis vinifera]
Length = 568
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 49 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 107
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 108 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 155
Query: 118 RDLSP--------SLDVCFKELLREEQRLATQTI---LQQNKMHDNAIAYAAAHWKSKGR 166
+DLS SL+V + L + A T +Q+N H N + KS G
Sbjct: 156 KDLSTISLTELLHSLEVVEQRRLMRQGDTAKGTFQARMQKNAGHKN----GKVNNKSCGN 211
Query: 167 DMRQ---VQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
+ + C CK+ H KC CN C K GH +E CQ Q VA+
Sbjct: 212 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGH--EETSAAVDYCQEEQLFVAT 269
>gi|147765596|emb|CAN71505.1| hypothetical protein VITISV_021018 [Vitis vinifera]
Length = 1157
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 39 AKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQS 95
A+ + +E + QGNL++ YF+ LW + +D V + D +++ E
Sbjct: 79 AENNMIEGILHDLRQGNLTVTEYFNTLTRLWRQ-LDTFEVHN-WNCVTDGFLYKKIVEGK 136
Query: 96 KRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQR--LATQTILQQNKMHDNA 153
+ +FL+ L + R +M PSL F E+ REE R L + Q N +A
Sbjct: 137 RVFRFLLGLNKNLDEIRGRIMGVKPLPSLREAFSEVRREESRKILMMGSHQQLNMAESSA 196
Query: 154 IAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ A + D RQ +K K +C++C+K GH + C
Sbjct: 197 LKTQFAPF-----DNRQ------------KIKGGKPWCDHCRKSGHSRETC 230
>gi|432846337|ref|XP_004065887.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Oryzias latipes]
Length = 592
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 171 VQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
V CF C H+V++C K CN C PGH+ C +P
Sbjct: 316 VPCFLCGAPGHLVIECPNKHCNNCGHPGHLFNSCSEKP 353
>gi|147797786|emb|CAN76340.1| hypothetical protein VITISV_026819 [Vitis vinifera]
Length = 598
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 26/204 (12%)
Query: 18 LHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMI 76
L TAKD+W+ +++ Y N +N ++ ++ + + QG+ Y++ LW + +D+
Sbjct: 27 LLPTAKDVWDEIRETYSNAENASQIFEIKTRLWQMKQGDREFTEYYTEMLGLWQD-LDL- 84
Query: 77 YVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLR 133
+ E D ++ E + +FL L + + RS +++R PS+ F ++ +
Sbjct: 85 SCEEEWECTGDNVRFKKKMENKRVFEFLAGLNRELDDVRSRVLSRRSLPSIREVFSKVRQ 144
Query: 134 EEQRL---------ATQTILQQNKMHDN----AIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
EE R + L + H +A H S G + S ++ +
Sbjct: 145 EESRRRVMLDLSFGPEGSALLTHGPHGPHGPLTVARRGPHAGSSGPHPARSSGPSPRQSK 204
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
+ +C YCKK GH C
Sbjct: 205 -------RTYCEYCKKLGHTKDTC 221
>gi|147805548|emb|CAN76348.1| hypothetical protein VITISV_028496 [Vitis vinifera]
Length = 213
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I +Q +L + Y
Sbjct: 78 SVDPKILLHLRAYKTYFKFWTQAKGLYTND-IQRLYKVASAIVHINQQDLDLSTYIGQIV 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ M+ + I + +Q + DQF M LRP E +++
Sbjct: 137 SLKEEFLTMMPLTPDIGA--------QQIQLDQFFMVLTLIGLRPDLEPIHDQILSSSSV 188
Query: 122 PSLDVCFKELLR 133
PSLD F L R
Sbjct: 189 PSLDDVFARLFR 200
>gi|147833373|emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]
Length = 1258
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 78 SVDSKILHHLRAYKTCFKFWNQAKGLYTND-IQRLYKVTSSIVNVRQQDMDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQF-----LMKLRPKYEAARSNLMNRDLS 121
+ E++ ++ P+ + DV + ++ + D+F L+ LRP E R ++
Sbjct: 137 SFKEEFLTVM----PLTT--DVGD--QRIQIDKFFMVLTLLGLRPDLETVRDQILGSSSI 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT+ N D+++ + Q S
Sbjct: 189 PSLDDVFARLLRIS---STQTLPSDNT-SDSSVLVS--------------QTNSRGGRNG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 NRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147837072|emb|CAN63639.1| hypothetical protein VITISV_038692 [Vitis vinifera]
Length = 199
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 46 YEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQF----- 100
Y+I Q N+ + Y +L E++ ++ P + A+ Q++ + D+F
Sbjct: 40 YDIVHVRQQNMDLSTYIGRIASLKEEFLTLM----PFTNGAEAQQI----QTDKFFIVLT 91
Query: 101 LMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAH 160
L+ LRP E + ++ PSLD F LL RL++ L + D+++ + +
Sbjct: 92 LIGLRPDLEFVQDQILASPSVPSLDDVFARLL----RLSSTQTLSTDSPSDSSVLASQTN 147
Query: 161 ---WKSKGRDMRQ-VQCFSCKEYRH 181
+S RD Q QC C ++ H
Sbjct: 148 SRGGRSGNRDRGQRPQCTYCNKFGH 172
>gi|322710166|gb|EFZ01741.1| hypothetical protein MAA_02970 [Metarhizium anisopliae ARSEF 23]
Length = 452
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
G D +CF+C E H C C YCKK GH+I++CP +P
Sbjct: 49 GNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKEGHMIRDCPDKP 95
>gi|255608047|ref|XP_002538835.1| conserved hypothetical protein [Ricinus communis]
gi|223510211|gb|EEF23548.1| conserved hypothetical protein [Ricinus communis]
Length = 92
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 89 QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNK 148
Q+ +Q + QFLM LR ++E+ R L+++ P+LDV EL+ EE RL +L ++
Sbjct: 17 QKARDQQRLFQFLMHLRLEFESIRGQLLHKSPLPTLDVALSELIAEEIRL---RVLGSSR 73
Query: 149 MHDNAIAYAAAHWKSKG 165
+ A AA +S
Sbjct: 74 SAEPATVLAAFGSRSSA 90
>gi|147865368|emb|CAN81940.1| hypothetical protein VITISV_007358 [Vitis vinifera]
Length = 772
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ ++T W K +Y D + + I Q ++ + Y
Sbjct: 62 SVDPKILHHLRAYETCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++ + D+F M LRP E R+ ++
Sbjct: 121 SLKEEFLTVM----PLTT--DVGD--QRIQIDKFFMVLTLIGLRPDLETVRNQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT+ N D+++ + Q S
Sbjct: 173 PSLDDVFARLLRIS---STQTLPSDNT-SDSSVLVS--------------QTNSRGGRSG 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 NRGRGQRPHCTYCNKLGHTRDRC 237
>gi|147858492|emb|CAN81397.1| hypothetical protein VITISV_018726 [Vitis vinifera]
Length = 567
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + + ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSTAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147855867|emb|CAN80753.1| hypothetical protein VITISV_003323 [Vitis vinifera]
Length = 1304
Score = 44.3 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D I R + +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-----------IQRLYK-DLDLSTYIGQIA 125
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LRP E+ R ++
Sbjct: 126 SLKEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLESIRDQILGSSSV 177
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 178 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 219
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 220 TRGRGQRPHCTYCNKLGHTRDRC 242
>gi|322698317|gb|EFY90088.1| zinc knuckle transcription factor (CnjB), putative [Metarhizium
acridum CQMa 102]
Length = 452
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
G D +CF+C E H C C YCKK GH+I++CP +P
Sbjct: 49 GNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKEGHMIRDCPDKP 95
>gi|147833448|emb|CAN68520.1| hypothetical protein VITISV_011970 [Vitis vinifera]
Length = 582
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 47/247 (19%)
Query: 5 MGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSIQ 59
++ S+ + + A ++WEYLK+ Y D K + E+E+ + + + +++
Sbjct: 53 FAAVSPSIFIKIMKIDLAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AVK 111
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN-R 118
+Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N +
Sbjct: 112 DYATQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENSK 159
Query: 119 DLSPSLDVCFKELLR-----EEQRLATQTILQ----QNKMHDNAIAYAAA--HWKSKGRD 167
DLS + ELL E++RL Q + Q +MH NA + KS G +
Sbjct: 160 DLS---TISLTELLHSLEAVEQRRLMRQGDIAEGAFQARMHKNAGHKNGKVNNNKSCGNN 216
Query: 168 MRQ---VQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQA 213
+ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 217 QKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQE 276
Query: 214 SQAVVAS 220
Q A+
Sbjct: 277 EQLFAAT 283
>gi|147862365|emb|CAN81916.1| hypothetical protein VITISV_038548 [Vitis vinifera]
Length = 1202
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I Q ++++ +Y
Sbjct: 78 SVDPKILHHLRAYKTCFKFWNQAKGLYTND-IQRLYKVTSSIVNVKQQDMNLSSYIDQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + DV + ++ + D+F M LRP E R ++
Sbjct: 137 SLKEEFLTVM----PLTT--DVGD--QRMQIDKFFMVLTLIGLRPDLETVRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLD F LLR +TQT+
Sbjct: 189 PSLDDVFARLLRIS---STQTL 207
>gi|147843456|emb|CAN82064.1| hypothetical protein VITISV_022772 [Vitis vinifera]
Length = 1224
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 97 SVDPRILFHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 155
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 156 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 207
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LL L++ L + D+++ + Q S
Sbjct: 208 PSLDDVFACLLH----LSSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 249
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 250 TRGRGQRPHCTYCNKLGHTRDRC 272
>gi|125533802|gb|EAY80350.1| hypothetical protein OsI_35520 [Oryza sativa Indica Group]
Length = 239
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKR-SHLEYEIARYSQGNLSIQ 59
M +I S+D ++ + K H +AK+MW YLK+ Y Q++ A R S L+ Q N SI+
Sbjct: 47 MGFIFMSVDVAIRIGFKAHTSAKEMWNYLKQRYTQESGALRFSLLQNLNNLQQQQNQSIE 106
Query: 60 NYFSGFQNLWAEYVDMIYVQ 79
+++ F L ++ +I ++
Sbjct: 107 EFYNVFTRLTGQFEQLIMLE 126
>gi|449463362|ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215551 [Cucumis sativus]
Length = 528
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI+ S+ + + ++ + + +W LK+ + + NT + L+ +A Q ++
Sbjct: 37 ISWILNSVSKPISASILFSDSTRAIWIDLKERFQKKNTPRIFQLKRSLATLEQNQDTVCM 96
Query: 61 YFSGFQNLWAEYVDMIYVQVP--------IESLADVQEVHEQSKRDQFLMKLRPKYEAAR 112
Y++ F+ L +D + P + + ++ + + FLM L + AR
Sbjct: 97 YYTKFKTL----IDELNTYRPGCTCGTCSCDGVREMTDFLQMEYLMDFLMGLNENFSQAR 152
Query: 113 SNLMNRDLSPSLDVCFKELLREEQR 137
L+ D PS F LL+EE++
Sbjct: 153 GQLLLMDPLPSTSRAFSLLLQEEEQ 177
>gi|147863420|emb|CAN79357.1| hypothetical protein VITISV_025405 [Vitis vinifera]
Length = 581
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + ++ +
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDV-V 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ----- 172
+DLS + ELL + + + +++Q + A+ A K+ G + ++
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEG--AFQARMQKNAGHKIGKMNNNKPC 234
Query: 173 -----------CFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN-------- 210
C CK+ H KC CN C K GH+ + C + Q
Sbjct: 235 SNNQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDY 294
Query: 211 CQASQAVVAS 220
CQ Q A+
Sbjct: 295 CQEEQLFAAT 304
>gi|403406142|dbj|BAM42647.1| polyprotein [Arabidopsis thaliana]
gi|403406144|dbj|BAM42648.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|147819470|emb|CAN61102.1| hypothetical protein VITISV_024945 [Vitis vinifera]
Length = 249
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 39/225 (17%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L +KT W +K +Y D + + I Q ++ + Y
Sbjct: 38 SVDPKILLHLWAYKTCFKFWNQVKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 96
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKL-----RPKYEAARSNLMNRDLS 121
+ E++ + +P+ + DV + ++++ D+F M L RP E ++
Sbjct: 97 SFKEEFL----IVMPLTT--DVGD--QRTQIDKFFMVLXLISFRPNLETISDQIIGSSSV 148
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +TQT+ N D+++ + Q S
Sbjct: 149 PSLDDVFARLLRIS---STQTLPSDNT-SDSSVLVS--------------QTNSRGGRSG 190
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC---PTRPQN----CQASQAVVA 219
+ + C YC K GH C RP + Q+S++ VA
Sbjct: 191 NRGRGQRPHCTYCNKFGHTRDRCYQLHGRPSHTAHVAQSSESSVA 235
>gi|147822225|emb|CAN63943.1| hypothetical protein VITISV_030434 [Vitis vinifera]
Length = 570
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYE S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEXTISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|147811713|emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]
Length = 1154
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D L+ N AK +W+ + Y + +T++ L+ + R Q SI+ Y
Sbjct: 103 WLINSMDPKLVSNFIRFSMAKAVWDNIVITYFDGTDTSQVYDLKRRVTRLKQEGGSIKTY 162
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLMNR 118
++ Q LW E +D P+E D+Q+ + + D+ FL +L + + R++++
Sbjct: 163 YNNLQGLWRE-IDFRRSN-PMEYDIDIQKYNSVLQEDRVYTFLDELDDRLDKIRADVLQI 220
Query: 119 DLSPSLDVCFKE 130
P+++ + +
Sbjct: 221 QPFPTVEQAYAQ 232
>gi|125600216|gb|EAZ39792.1| hypothetical protein OsJ_24232 [Oryza sativa Japonica Group]
Length = 695
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 1 MTWIMGSIDQSLILNLKLHKT-AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W+ G+I L+ ++ H T A+ +W L+ + + A+ +L E + QG+LS+
Sbjct: 229 LSWMYGTISTDLLESVMTHTTTARLVWRSLEHQFLGNREARALNLNAEFYNFQQGDLSVT 288
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIE----SLADVQEVHEQSKRDQFLMKLR---PKYEAAR 112
+Y + + A+ D V P+ +LA +Q + E Q +R P + R
Sbjct: 289 DYCRRLKAMAADLAD---VGEPVGDRTLTLATIQGLDENFAHLQSAFTMRKPFPSFAEVR 345
Query: 113 SNLM------NRDLSPS 123
S L+ NR +P+
Sbjct: 346 SQLLLDELTKNRSHTPA 362
>gi|404433800|dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|404433802|dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|403406148|dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|403406146|dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|403406140|dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|4996367|dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 43.9 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|358345776|ref|XP_003636951.1| hypothetical protein MTR_065s0029 [Medicago truncatula]
gi|355502886|gb|AES84089.1| hypothetical protein MTR_065s0029 [Medicago truncatula]
Length = 247
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 34/206 (16%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S+ + + H A D+WE LK+ +++ + K + Y
Sbjct: 69 SWIINSVTDLIAQTIVFHDYAFDVWEDLKERFSKIDRTKY----------------VLEY 112
Query: 62 FSGFQNLWAE---YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
F + LW E + + P + D V Q QFL L ++ ++ ++
Sbjct: 113 FIEMKALWEELHSHRPLPNYACPYQCRCDAVRVPNQII--QFLTDLSEQFSVVKTQVLLM 170
Query: 119 DLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKE 178
L P+L+ F +L+EE A+ + + + DN + A K +G
Sbjct: 171 YLLPTLNKVFFLVLQEESSNASLPSI-PSLVEDNVLVNAYDAKKPQGHG----------- 218
Query: 179 YRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ K + +FC +C + H I C
Sbjct: 219 -KGSFTKPSSRFCTFCNRHNHTIDFC 243
>gi|147822540|emb|CAN63946.1| hypothetical protein VITISV_035427 [Vitis vinifera]
Length = 575
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ ++ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-SDKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNEKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 296
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 297 EEQLFAAT 304
>gi|404433796|dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.9 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|404433792|dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.9 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|404433790|dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.9 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|4996369|dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.9 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|404433794|dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 43.9 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
I+G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 ILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGAKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E D Y+ + +D PS
Sbjct: 148 GF---ITRFDQLALLGKPMDHDEQVERVLENLPDD---------YKPVIDQIAAKDTPPS 195
Query: 124 LDVCFKELLREEQRL 138
L + L+ +E +L
Sbjct: 196 LTEIHERLINQESKL 210
>gi|147832965|emb|CAN66125.1| hypothetical protein VITISV_044030 [Vitis vinifera]
Length = 1070
Score = 43.9 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 85 LADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTIL 144
+A ++ EQ + +F + L + + R +M PSL F E+ REE R + ++
Sbjct: 469 IATYGQIVEQKRLFKFFLGLNRELDDVRDRIMGIKPLPSLREDFSEVRREESR--KKVMM 526
Query: 145 QQNKMHD---NAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHII 201
+ H +A A AA + S G D RQ Q + +C+YCKK GH
Sbjct: 527 GSKEQHAPTLDAFALAARSFNSSGGD-RQKQ--------------DRPWCDYCKKLGHYK 571
Query: 202 KEC 204
+ C
Sbjct: 572 EAC 574
>gi|414883912|tpg|DAA59926.1| TPA: hypothetical protein ZEAMMB73_445489 [Zea mays]
Length = 556
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 167 DMRQVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQA 213
D+R +CF+C H +C+ + C +C++PGH + ECP R N A
Sbjct: 170 DLRG-RCFNCFSADHRAARCSNRVRCFFCRRPGHRVSECPRRQTNLAA 216
>gi|389610781|dbj|BAM19001.1| simila to CG3800 [Papilio polytes]
Length = 145
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 95 SKRDQFLMKLRPK-YEAARSNLMNRDLSPSLDVCFK-ELLREEQRLATQTILQQNKMHDN 152
+ RD + R K ++ R+ RD D C++ R Q+ + + + N
Sbjct: 26 ASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN 85
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
+ A + GRD C++C + HI C K C C KPGHI ++C
Sbjct: 86 KTGHIARNCPEGGRDSSGQTCYTCNKAGHISRNCPDGTKTCYVCGKPGHISRDC 139
>gi|389608533|dbj|BAM17876.1| similar to CG3800 [Papilio xuthus]
Length = 144
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 95 SKRDQFLMKLRPK-YEAARSNLMNRDLSPSLDVCFK-ELLREEQRLATQTILQQNKMHDN 152
+ RD + R K ++ R+ RD D C++ R Q+ + + + N
Sbjct: 25 ASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN 84
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
+ A + GRD C++C + HI C K C C KPGHI ++C
Sbjct: 85 KTGHIARNCPEGGRDSSGQTCYTCNKAGHISRNCPDGTKTCYVCGKPGHISRDC 138
>gi|126542369|gb|ABO16616.1| gag protein [Feline immunodeficiency virus]
gi|134284831|gb|ABO69517.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++++VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSKFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + + K+K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQVKTK 374
Query: 165 GRDMRQ----VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
GR ++ ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GRKLQNRGGPLKCFNCGKIGHLARNCRAPKRCNKCGKSGHISTDC 419
>gi|147841808|emb|CAN75434.1| hypothetical protein VITISV_027911 [Vitis vinifera]
Length = 1162
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ S+ + N L+ AK++W+ K+ Y N +NT++ +E + + QG L+
Sbjct: 3 MSWLINSMTNDIGENFLLYGIAKEIWDAAKETYSNNENTSELFEVESVLHDFRQGELTQL 62
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+ F ++ W D I +++ E+ + +FL+ L + R ++
Sbjct: 63 DLFE--EHNWTCPGDGIR----------YRQIIERKRIYKFLIGLNKNLDEVRGRILGSK 110
Query: 120 LSPSLDVCFKELLREEQR 137
++ F E+ REE R
Sbjct: 111 PLLNIREAFSEVRREESR 128
>gi|147782986|emb|CAN62020.1| hypothetical protein VITISV_019562 [Vitis vinifera]
Length = 544
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNT---------AKRSHLEYEIARY 51
+ W+M +D +L ++ T K+ +Y+ T A+ + +E +
Sbjct: 153 LAWMM-LLDGCFLLQF-IYGTGKEKDDYITGASAAPETTASTYKKWIAENNMIEGILHDL 210
Query: 52 SQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLAD---VQEVHEQSKRDQFLMKLRPKY 108
QGNL++ YF+ LW + +D V + D +++ E +FL+ L
Sbjct: 211 RQGNLTVTEYFNTLTRLWRQ-LDTFEVHN-WNCVTDGFLYKKIVEGKXVFKFLLGLNKNL 268
Query: 109 EAARSNLMNRDLSPSLDVCFKELLREEQR--LATQTILQQNKMHDNAIAYAAAHWKSKGR 166
+ R +M PSL F E+ REE R L + Q N +A+ A +
Sbjct: 269 DEIRGRIMGVKPLPSLREAFSEVRREESRKNLMMGSHQQLNMAESSALKTQFAPF----- 323
Query: 167 DMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
D RQ +K + +C++C+K GH + C
Sbjct: 324 DNRQ------------KIKGGRPWCDHCRKXGHSRETC 349
>gi|9929868|dbj|BAB12109.1| gag polyprotein [Equine infectious anemia virus]
Length = 488
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
G QN G + + E++D + Q I+S QE+ SK + ++ E R+
Sbjct: 270 GKPKAQNIRQGVKEPYPEFIDRLLSQ--IKSEGHPQEI---SKFLTDTLTIQNANEECRN 324
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ- 172
+ R L P + K + Q ++ K +A KG ++ Q
Sbjct: 325 AM--RHLRPEDTLEEKMYACRDIGTTKQKMMLLAKALQTGLAGPFKGGALKGGPLKAAQT 382
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C + P+N Q +Q
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVPKNGKQGAQG 428
>gi|9626531|ref|NP_056901.1| gag protein [Equine infectious anemia virus]
gi|62288102|sp|P69730.1|GAG_EIAV9 RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix
protein p15; Short=MA; Contains: RecName: Full=Capsid
protein p26; Short=CA; Contains: RecName: Full=p1;
Contains: RecName: Full=Nucleocapsid protein p11;
Short=NC; Contains: RecName: Full=p9
gi|62288103|sp|P69731.1|GAG_EIAVC RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix
protein p15; Short=MA; Contains: RecName: Full=Capsid
protein p26; Short=CA; Contains: RecName: Full=p1;
Contains: RecName: Full=Nucleocapsid protein p11;
Short=NC; Contains: RecName: Full=p9
gi|62288104|sp|P69732.1|GAG_EIAVY RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix
protein p15; Short=MA; Contains: RecName: Full=Capsid
protein p26; Short=CA; Contains: RecName: Full=p1;
Contains: RecName: Full=Nucleocapsid protein p11;
Short=NC; Contains: RecName: Full=p9
gi|9944517|gb|AAG02701.1|AF247394_1 gag protein [Equine infectious anemia virus]
gi|290628|gb|AAA43003.1| gag protein [Equine infectious anemia virus]
gi|323837|gb|AAB59861.1| gag protein [Equine infectious anemia virus]
gi|2801511|gb|AAC82599.1| gag protein [Equine infectious anemia virus]
gi|2905987|gb|AAC03760.1| gag polyprotein [Equine infectious anemia virus]
gi|3248894|gb|AAC24014.1| gag polyprotein [Equine infectious anemia virus]
gi|3248901|gb|AAC24020.1| gag polyprotein [Equine infectious anemia virus]
gi|89954445|gb|ABD83644.1| codon usage optimized EIAV-gag protein [synthetic construct]
Length = 486
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
G QN G + + E+VD + Q I+S QE+ SK + ++ E R+
Sbjct: 270 GKPKAQNIRQGAKEPYPEFVDRLLSQ--IKSEGHPQEI---SKFLTDTLTIQNANEECRN 324
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ- 172
+ R L P + K + Q ++ K +A KG ++ Q
Sbjct: 325 AM--RHLRPEDTLEEKMYACRDIGTTKQKMMLLAKALQTGLAGPFKGGALKGGPLKAAQT 382
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C + P+N Q +Q
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVPKNGKQGAQG 428
>gi|126542347|gb|ABO16605.1| gag protein [Feline immunodeficiency virus]
gi|134284754|gb|ABO69451.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E+VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + + K+K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQVKAK 374
Query: 165 GRDMRQ----VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
G+ ++ ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GKKLQNRGGPLKCFNCGKAGHMARNCRAPKRCNKCGKSGHISTDC 419
>gi|126542345|gb|ABO16604.1| gag protein [Feline immunodeficiency virus]
gi|134284743|gb|ABO69441.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E+VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A ++L D ++ +R Q + + T + N + + K+K
Sbjct: 323 ECKRAMNHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQVKAK 374
Query: 165 GRDMRQ----VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
GR ++ ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GRKLQNRGGPLKCFNCGKAGHMARNCRAPKRCNKCGKSGHISTDC 419
>gi|9929861|dbj|BAB12103.1| gag polyprotein [Equine infectious anemia virus]
Length = 488
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
G QN G + + E++D + Q I+S QE+ SK + ++ E R+
Sbjct: 270 GKPKAQNIRQGVKEPYPEFIDRLLSQ--IKSEGHPQEI---SKFLTDTLTIQNANEECRN 324
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ- 172
+ R L P + K + Q ++ K +A KG ++ Q
Sbjct: 325 AM--RHLRPEDTLEEKMYACRDIGTTKQKMMLLAKALQTGLAGPFKGGALKGGPLKAAQT 382
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C + P+N Q +Q
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVPKNGKQGAQG 428
>gi|242055077|ref|XP_002456684.1| hypothetical protein SORBIDRAFT_03g040841 [Sorghum bicolor]
gi|241928659|gb|EES01804.1| hypothetical protein SORBIDRAFT_03g040841 [Sorghum bicolor]
Length = 223
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 53 QGNLSIQNYFSGFQNLWAEYVDMIYVQVP-IESLADVQEVHEQSKRDQFLMKLRPKYEAA 111
QG S+ Y + ++LWA+ +++P E + V++ E+ + FL L P++EA
Sbjct: 23 QGERSVMEYVAELKSLWADADHYKPIELPHSECVTWVKKWIEEKRVIHFLRGLNPEFEAR 82
Query: 112 RSNLMNRDLSPSLDVCFKELLREEQRL 138
RS + ++ PSLD + +EE RL
Sbjct: 83 RSAIFHQPTLPSLDEAIAAISQEEYRL 109
>gi|126542375|gb|ABO16619.1| gag protein [Feline immunodeficiency virus]
Length = 468
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + + E+VD + Q+ +E + EV K+ + + + A ++L
Sbjct: 294 GVKEPYQEFVDRLLKQIDLEQ--NSPEVRLYLKQSLSITNANSECKRAMTHL-------K 344
Query: 124 LDVCFKELLREEQRLATQTILQQNKMHDNAIAYAA----AHWKSKGRDMRQ-VQCFSCKE 178
D +E LR Q + T T +KM A +AA WK+K R+ + +C++C +
Sbjct: 345 PDSPLEEKLRACQDIGTNT----HKMQMLAETFAALQVKTPWKTKNRNTKSSFKCYNCGK 400
Query: 179 YRHIVVKC-AKKFCNYCKKPGHIIKEC 204
H+ C A K CN C K GH+ +C
Sbjct: 401 PGHLARACRAPKKCNNCGKFGHVANQC 427
>gi|291224621|ref|XP_002732301.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 1564
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 172 QCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
QC+ C E H+ KC +F C C KPGHI CPT
Sbjct: 332 QCYVCGELGHLARKCPTRFKVTCYTCGKPGHISPRCPT 369
>gi|147765480|emb|CAN66955.1| hypothetical protein VITISV_020634 [Vitis vinifera]
Length = 470
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 8 IDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQN 67
+D ++L+L+ +KT W K +Y D + + I Q ++++ Y +
Sbjct: 62 VDPKILLHLQAYKTCFKFWNQAKGLYMND-IQRLYKVASSIVNVRQQDMNLSTYIGLIAS 120
Query: 68 LWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLSP 122
L E++ ++ P+ + DV + ++++ D+F M L P E R ++ P
Sbjct: 121 LKEEFLTVM----PLST--DVGD--QRTQIDKFFMVLTLIGLLPDLETIRDQILGSSSVP 172
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHI 182
SLD F LL +++ IL + D+++ + Q S
Sbjct: 173 SLDDVFARLLH----ISSTQILPSDNTSDSSVLVS--------------QTNSRGGRSGN 214
Query: 183 VVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 RGRGQRPHCTYCNKLGHTRDRC 236
>gi|323775|gb|AAA43011.1| gag [Equine infectious anemia virus]
Length = 512
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARS 113
G QN G + + E+VD + Q I+S QE+ SK + ++ E R+
Sbjct: 296 GKPKAQNIRQGAKEPYPEFVDRLLSQ--IKSEGHPQEI---SKFLTDTLTIQNANEECRN 350
Query: 114 NLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ- 172
+ R L P + K + Q ++ K +A KG ++ Q
Sbjct: 351 AM--RHLRPEDTLEEKMYACRDIGTTKQKMMLLAKALQTGLAGPFKGGALKGGPLKAAQT 408
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C + P+N Q +Q
Sbjct: 409 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVPKNGKQGAQG 454
>gi|9759493|dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ +ID L+ N+ A+D+WE ++K + N K ++ ++A Q ++++
Sbjct: 88 VSWMKMTIDSELLTNISHRDVARDLWEQIRKRFFVSNGPKNQKMKADLATCKQEGMTMEG 147
Query: 61 YFSGFQNLW 69
Y+ +W
Sbjct: 148 YYGKLNKIW 156
>gi|147858888|emb|CAN80841.1| hypothetical protein VITISV_002785 [Vitis vinifera]
Length = 1184
Score = 43.1 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K++Y D + + I Q ++ + YF
Sbjct: 65 SVDPKILLHLRAYKTCFKFWNQTKRLYTNDIQCLYK-VAFSIVNVRQQDMDLSTYFGQIV 123
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E + ++ P+ + DV + +Q++ D+F M LRP E + +++
Sbjct: 124 SLKEELLTVM----PLTT--DVGD--QQTQIDKFFMVLMLIGLRPDLETIHNQILDSSSI 175
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LLR +TQT+ DN ++ ++ R R C Y
Sbjct: 176 SSLDDVFARLLRIS---STQTL-----SSDNTSDFSLLVSQTNSRGGRSNNRGQCPHY-- 225
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
YC K GH +C
Sbjct: 226 ----------TYCNKFGHTCDQC 238
>gi|147843692|emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]
Length = 154
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ ID+SL ++ +TAKDMWE LK+ Y N + L EI Q +++
Sbjct: 86 ISWMFNVIDKSLHSSVAYAQTAKDMWEDLKERYAVGNAPRVHQLRSEIVNLKQEGMTVAA 145
Query: 61 YFS 63
Y++
Sbjct: 146 YYA 148
>gi|224055871|ref|XP_002298693.1| predicted protein [Populus trichocarpa]
gi|222845951|gb|EEE83498.1| predicted protein [Populus trichocarpa]
Length = 299
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 25 MWEYLKKVYNQDNTAKRSHLEYEI----ARYSQGNLSIQNYFSGFQNLWAE--YVDMIYV 78
M E L++ Y++ K + L YEI + Q N+ + Y++ ++ W E Y +
Sbjct: 80 MPEVLRQTYSK---VKDAALIYEIKTKLSMTKQDNMMVIEYYNTMKSFWLELDYYQDFKM 136
Query: 79 QVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRL 138
Q +++ ++ E+ + +FL L +++ R ++ ++ PSL+ F + EE R
Sbjct: 137 QCNDDAVI-LKNYVERERIFEFLAGLNIEFDQMRVQILGKESLPSLNEVFSVIRAEEGRR 195
Query: 139 ATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKK---FCNYCK 195
M D +A + R+M + E I K K FCNYCK
Sbjct: 196 TV--------MLDAPNTEGSAMLITNSRNMGD--AMNGAEVGKIEGKKIPKDDLFCNYCK 245
Query: 196 KPGHIIKEC 204
K GH + C
Sbjct: 246 KTGHTKETC 254
>gi|281204089|gb|EFA78285.1| hypothetical protein PPL_08936 [Polysphondylium pallidum PN500]
Length = 428
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 172 QCFSCKEYRHIVVKCAKK-----FCNYCKKPGHIIKECPTR 207
+CF C + HI +C KK C YC KPGH + +CP +
Sbjct: 15 KCFICNKTDHISTRCPKKKGDGSNCFYCNKPGHTVMKCPEK 55
>gi|147815786|emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
Length = 1205
Score = 43.1 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 62 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 120
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+ M LR E R ++
Sbjct: 121 SLKEQFLTVM----PLTPDVGAQ----QTQLDKXFMVLTLIGLRXDLEPIRDQILGSSSV 172
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LLR +++ L + D+++ + Q S
Sbjct: 173 PSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSX 214
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 215 TRGRGQRPHCTYCNKLGHTRDRC 237
>gi|358395603|gb|EHK44990.1| hypothetical protein TRIATDRAFT_166172, partial [Trichoderma
atroviride IMI 206040]
Length = 404
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 152 NAIAYAAAHWKSKGRDMRQV---QCFSCKEYRHIVVKCAK---KFCNYCKKPGHIIKECP 205
NA Y +K D + +CF C E H +C + C YCKK GH++K+CP
Sbjct: 22 NANNYDDGGYKGDVNDAGEYGNDKCFGCGEEGHRRAECPNAEAQTCRYCKKEGHMVKDCP 81
Query: 206 TRP 208
+P
Sbjct: 82 DKP 84
>gi|5306246|gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ S+ + ++ D+W L +N N + +L EI Q LS+ Y
Sbjct: 104 SWLLNSMSPQIYRSILRMNDVSDIWRDLNSRFNMTNLPRTYNLTQEIQDLRQSTLSLSEY 163
Query: 62 FSGFQNLWAEYVDMIYVQVPIE--SLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW + + P +Q+ E++K +FL L Y R ++ +
Sbjct: 164 YTRLKTLWDQLNSTEELDDPCTCGKALRLQQKAERAKIVKFLAGLNESYAIIRRQVIAKK 223
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
+ PS L E + Q QQ N +A A S+ + C Y
Sbjct: 224 ILPS--------LAEVYHIVDQDNSQQG--FSNVVAPPVAFQVSEVTVANIIDPTIC--Y 271
Query: 180 RHIVVKCAKKFCNYCKKPGHIIKEC 204
+ C++ + GHI + C
Sbjct: 272 VQNCPNKGRPMCSFYNRVGHIAERC 296
>gi|328865796|gb|EGG14182.1| hypothetical protein DFA_11951 [Dictyostelium fasciculatum]
Length = 130
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 169 RQVQCFSCKEYRHIVVKCA-KKFCNYCKKPGHIIKECPTRPQN 210
+++ C+ CK+ H C + CN+CK+PGH +ECP +P+
Sbjct: 4 KEILCYKCKKPGHKAAGCTDEAVCNFCKQPGHFFRECPEKPEG 46
>gi|432956394|ref|XP_004085700.1| PREDICTED: zinc finger CCHC domain-containing protein 3-like
[Oryzias latipes]
Length = 376
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQ 209
C C E+ H+V C+K FC C+ GH+ +ECP Q
Sbjct: 184 CRRCGEHGHLVEDCSKPFCGKCRNIGHVYEECPNGRQ 220
>gi|2865427|gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ L T+ ++WE L + + A L ++ ++++G SI YF
Sbjct: 95 LLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQ 154
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPK-YEAARSNLMNRDLSP 122
GF + + LA + + E+ ++ + ++ P+ Y+ + R+ P
Sbjct: 155 GFTTRF-------------DHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPP 201
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAY 156
+L ++L+ E +LA + + NA+ Y
Sbjct: 202 ALTEVLEKLINHEVKLAAKAEATSVPVTANAVNY 235
>gi|2865424|gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ L T+ ++WE L + + A L ++ ++++G SI YF
Sbjct: 95 LLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQ 154
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPK-YEAARSNLMNRDLSP 122
GF + + LA + + E+ ++ + ++ P+ Y+ + R+ P
Sbjct: 155 GFTTRF-------------DHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPP 201
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAY 156
+L ++L+ E +LA + + NA+ Y
Sbjct: 202 ALTEVLEKLINHEVKLAAKAEATSVPVTANAVNY 235
>gi|2865431|gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ L T+ ++WE L + + A L ++ ++++G SI YF
Sbjct: 95 LLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQ 154
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPK-YEAARSNLMNRDLSP 122
GF + + LA + + E+ ++ + ++ P+ Y+ + R+ P
Sbjct: 155 GFTTRF-------------DHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPP 201
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAY 156
+L ++L+ E +LA + + NA+ Y
Sbjct: 202 ALTEVLEKLINHEVKLAAKAEATSVPVTANAVNY 235
>gi|147790287|emb|CAN74375.1| hypothetical protein VITISV_044324 [Vitis vinifera]
Length = 523
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIXNMXVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTXEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQ 209
++ C CK+ H KC CN C K GH+ + C + Q
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQ 285
>gi|147771263|emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
Length = 1225
Score = 42.7 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 59 SVDPRILXHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 117
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 118 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 169
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LLR +++ L + D+++ + Q S
Sbjct: 170 XSLDDVFARLLR----ISSTQTLPSDSASDSSVLVS--------------QTTSRGGRSG 211
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 212 TRGRGQRPHCTYCNKLGHTRDRC 234
>gi|403291696|ref|XP_003936912.1| PREDICTED: cellular nucleic acid-binding protein-like [Saimiri
boliviensis boliviensis]
Length = 169
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
YA +D +V+C+ C E H+ + C+K C C KPGH+ +ECP+
Sbjct: 111 CYACGQLGHIQKDCAKVKCYRCGETGHMAISCSKAIQVNCYRCGKPGHLARECPS 165
>gi|48716831|dbj|BAD23529.1| hypothetical protein [Oryza sativa Japonica Group]
gi|48717016|dbj|BAD23707.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222641111|gb|EEE69243.1| hypothetical protein OsJ_28490 [Oryza sativa Japonica Group]
Length = 156
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M I S+ SLI++L +TAK +W LK+ Y QD+ A L + Q +SI
Sbjct: 70 MAAIFNSVKHSLIMSLSKFQTAKAIWGSLKQRYVQDSGALLHTLMQQTHAIEQNGMSIDE 129
Query: 61 YFSGFQNL 68
Y+S F +L
Sbjct: 130 YYSAFDHL 137
>gi|342887520|gb|EGU87002.1| hypothetical protein FOXB_02396 [Fusarium oxysporum Fo5176]
Length = 457
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 172 QCFSCKE--YRHIVVKCAKK---FCNYCKKPGHIIKECPTRP 208
+CF C E + H +C C +CK+PGH+IKECP +P
Sbjct: 59 KCFGCGETGFSHRRAECPNPQEMTCRFCKQPGHMIKECPDKP 100
>gi|147857338|emb|CAN79196.1| hypothetical protein VITISV_000238 [Vitis vinifera]
Length = 906
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 21 TAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNYFSGFQNLWAE--YVDMIY 77
TAKD+W+ +++ Y++ A + + ++ + QG+ ++ Y + + LW E + +I
Sbjct: 29 TAKDIWDAIQQTYSKARDAAQVYEVKVKTIVAKQGSKTVTKYVNQLKALWQELDHYRVIK 88
Query: 78 VQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKE---LLRE 134
+ P E A +++ EQ + FL+ P+++ R ++ + P CF E L+R+
Sbjct: 89 TKYP-EDAAVLKDFIEQDRVYDFLVGFNPEFDQVRIQILGKQEVP----CFNEVVALIRD 143
Query: 135 EQ 136
E+
Sbjct: 144 EE 145
>gi|432955938|ref|XP_004085637.1| PREDICTED: uncharacterized protein LOC101164623, partial [Oryzias
latipes]
Length = 449
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECP 205
C C E+ H+V C+K FC C+ GH+ +ECP
Sbjct: 184 CRRCGEHGHLVEDCSKPFCGKCRNIGHVYEECP 216
>gi|147789978|emb|CAN60688.1| hypothetical protein VITISV_017222 [Vitis vinifera]
Length = 538
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+DLS + ELL ++ +N H N + ++ C CK
Sbjct: 180 KDLS---TISLTELL--------HSLEAKNAGHKNGKVNNNKSCGNNQKNGXFPPCPHCK 228
Query: 178 EYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
+ H KC CN C K GH +E CQ Q VA+
Sbjct: 229 KTNHSPQKCWWRPDVKCNKCGKQGH--EETSAAVDYCQEEQLFVAT 272
>gi|400593110|gb|EJP61112.1| pol-like protein [Beauveria bassiana ARSEF 2860]
Length = 946
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD---NAIAYAAAHWKSK-------GR 166
N + PS ++ + L +E L +++ + NAI Y W + R
Sbjct: 188 NHTVFPSANISYIGWLTKEAHLKRASLIVVEFIEPEMANAIIYTGMVWDGQIHQCQLYDR 247
Query: 167 DMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECP 205
R QCF C Y HI +C A + C YC + H +K CP
Sbjct: 248 AYRVKQCFRCYSYGHISTQCNASRTCGYCAE-QHELKHCP 286
>gi|10177143|dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 76/195 (38%), Gaps = 9/195 (4%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+WI+ S+ + + ++ A ++W+ L ++ N + L +I QG +S+ +Y
Sbjct: 132 SWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDY 191
Query: 62 FSGFQNLWAEYVDMIYVQV--PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
++ + LW + V + E SK +FL L Y RS ++ +
Sbjct: 192 YTALKTLWDDLDGASCVSTCKNCTCCIATASMIEHSKIVKFLSGLNESYSTIRSQIIMKK 251
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIA-----YAAAHWKSKGRDMR-QVQC 173
P L + LL ++ + N N A +A KS G + +VQC
Sbjct: 252 TIPDLAEIY-NLLDQDHSQRNIVTMPTNASTFNVSAPQSDQFAVNLAKSFGTQPKPKVQC 310
Query: 174 FSCKEYRHIVVKCAK 188
C H C K
Sbjct: 311 SHCGYTGHNADTCYK 325
>gi|432953363|ref|XP_004085368.1| PREDICTED: zinc finger CCHC domain-containing protein 3-like,
partial [Oryzias latipes]
Length = 332
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECP 205
C C E+ H+V C+K FC C+ GH+ +ECP
Sbjct: 184 CRRCGEHGHLVEDCSKPFCGKCRHTGHVYEECP 216
>gi|147825255|emb|CAN71088.1| hypothetical protein VITISV_033975 [Vitis vinifera]
Length = 285
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + + Q ++ + Y
Sbjct: 78 SVDPKILHHLRAYKTCFKFWTQAKGLYTND-IQRFYKVVSDTVHVRQQDMDLSAYIGRIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P + + Q++ + D+F M LRP ++ R ++
Sbjct: 137 SLKKEFLTLM----PFTNGVEAQQI----QTDKFFMVLTLISLRPDLKSVRDQILASPSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD LLR +TQT+ + +A + + + + QC
Sbjct: 189 PSLDDVVARLLRLS---STQTLSTDGPSDLSMLASQTNSREGRSGNRGRGQC-------- 237
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
C YC K GH C
Sbjct: 238 -------PQCTYCNKLGHTRDRC 253
>gi|126542349|gb|ABO16606.1| gag protein [Feline immunodeficiency virus]
gi|134284761|gb|ABO69457.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E+VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + + + K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQIRPK 374
Query: 165 GRDMRQ----VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
GR + ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GRKQQNRGGPLKCFNCGKIGHLARNCRAPKRCNKCGKSGHISTDC 419
>gi|338746563|dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E L +Y+ + +D P+
Sbjct: 148 GFV---TRFDQLALLGKPMDHDEQVERVLEN---------LPEEYKPVIDQIAAKDTPPT 195
Query: 124 LDVCFKELLREEQRL 138
L + LL E ++
Sbjct: 196 LTEIHERLLNHESKI 210
>gi|226530585|ref|NP_001146802.1| uncharacterized protein LOC100280407 [Zea mays]
gi|219888819|gb|ACL54784.1| unknown [Zea mays]
Length = 244
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Query: 56 LSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNL 115
+SI Y+S F L + M+ + A + E+ +F+M +RP++++ R+ L
Sbjct: 1 MSIDEYYSAFDRLMSALTSMVPACTAVPCPA--HKFIEKFFTYRFVMGVRPEFDSLRARL 58
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
++ + ++ ELL EE RL + + + H AAA + R+ C
Sbjct: 59 LHSSDTLTMAHALSELLAEETRLKSMSSITGVSSHS---VLAAAQ---RSRNTSFQPCEH 112
Query: 176 CKEYRHIVVKCAKKF 190
CK+ H C K
Sbjct: 113 CKKTTHRSENCFAKL 127
>gi|147775589|emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]
Length = 1257
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 14/188 (7%)
Query: 11 SLILNLKLH-KTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQNYFSGFQNL 68
S I+ L H + K++ +YL +Y+ R + + S+ G S+ YF F+ +
Sbjct: 78 SDIVGLPSHCEFVKELMDYLDFLYSGKGNVSRMYDVWNAFHCSEKGAKSLTAYFMDFKKV 137
Query: 69 WAEYVDMIYVQVPIESLADVQEVH-EQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVC 127
+ E + +P VQ+ EQ FL L ++E A+S+++ SL
Sbjct: 138 YEE----LNALMPFSPEVKVQQAQREQMVVMSFLSGLPSEFETAKSHIIFGSDIGSLQEV 193
Query: 128 FKELLREEQRLATQ---TILQQNKMHDNAIAY----AAAHWKSKGRDMRQVQCFSCKEYR 180
F +LR E ++Q ++ + +NA ++++G D + CF C E
Sbjct: 194 FSRVLRTENVSSSQHTNVLVAKGGNAENARRVNNRGGNRAFENRGNDSSTIVCFYCHEVG 253
Query: 181 HIVVKCAK 188
H C K
Sbjct: 254 HTKKNCRK 261
>gi|112982721|ref|NP_001037117.1| zinc finger protein [Bombyx mori]
gi|59858992|gb|AAX09282.1| zinc finger protein [Bombyx mori]
Length = 143
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 97 RDQFLMKLRPK-YEAARSNLMNRDLSPSLDVCFK-ELLREEQRLATQTILQQNKMHDNAI 154
RD + R K ++ R+ RD D C++ R Q+ + + + N
Sbjct: 27 RDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKT 86
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
+ A + GR+ C++C + HI C K C C KPGHI +EC
Sbjct: 87 GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 138
>gi|224119568|ref|XP_002318106.1| predicted protein [Populus trichocarpa]
gi|222858779|gb|EEE96326.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-----LEYEIARYSQGNLSI 58
+ ++ ++ + ++AKD+W+YLKK Y D + E+E+ R +I
Sbjct: 75 LFAAVSTTIFTRIMSLQSAKDVWDYLKKEYAGDERIRGMQSLNLIREFELQRMKDSE-TI 133
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
+ Y + V++ + S AD + V ++ L+ + KYEA+ + L N
Sbjct: 134 KEYSDKLMGIANR------VRLLVTSFADSRIV------EKLLVTVPEKYEASITTLENT 181
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCK 177
+DLS + ELL Q + +++Q+ + A+ A + K + S K
Sbjct: 182 KDLS---KITLTELLNALQAQEQRRLMRQDHAIEGALQAKFADYDKKKFSRKNAASGSIK 238
Query: 178 E----YRHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
+ +K C +C K GH +C RP
Sbjct: 239 PNQGYNKGKFIKRNFPPCQHCNKSGHPPFKCWKRP 273
>gi|147773033|emb|CAN60644.1| hypothetical protein VITISV_025693 [Vitis vinifera]
Length = 595
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK Y + K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKINSAXEIWEYLKXEYKGNERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTVEGAFQARMQKNAGHKNGKMNNNKPCSN 236
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAV 217
++ C CK+ H KC CN C K GH+ C + Q + S AV
Sbjct: 237 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVEXICKNQQQE-ETSAAV 292
>gi|6642775|gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera]
Length = 581
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 39/239 (16%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y D K + E+E+ + + + ++
Sbjct: 73 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESD-AV 131
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 132 KDYAAQLLSI-ANKVRLLGKEFSNEKI--VQKI---------LVTLPKKYEATISSLENS 179
Query: 118 RDLSPSLDVCFKELLR-----EEQRLATQTILQ----QNKMHDNAIAYAAA--HWKSKGR 166
+DLS + ELL E++RL Q Q +MH NA + KS G
Sbjct: 180 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMHKNAGHKNGKVNNNKSCGN 236
Query: 167 DMRQ---VQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQNCQASQAVVA 219
+ + C C++ H KC + CN C K GH+ + C + Q +A
Sbjct: 237 NQKNGVFPPCPHCQKTNHSPQKCWWETRCECNKCGKQGHVERICKINSRKKLVQQLTIA 295
>gi|147817226|emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
Length = 1161
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 26/229 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
+I++ ++ +++ KT + W K++++ N + LE E+ Q + +I YF +
Sbjct: 72 TIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIXQRDXTIAXYFHKVK 131
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDV 126
L E + + ++ PI E + + LRP++ + + PSL V
Sbjct: 132 TLCRE-ISELDLEAPI---------GETRMKRIIIHGLRPEFRGFVAAIQGWQNQPSL-V 180
Query: 127 CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQV-----QCFSCKEYRH 181
F+ LL ++ LA Q K + A+ W SK +R+ + S + R
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKXRWNSKQHTVRRTKKNEDKAKSSQGERS 240
Query: 182 IVVK-------CAKKF---CNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
V+ KKF C C+K GH+ K+C ++ +++ A S
Sbjct: 241 ARVEGDSKNPXTRKKFEGTCYNCRKKGHMAKDCWSKKGLVESNAATSKS 289
>gi|147802663|emb|CAN77523.1| hypothetical protein VITISV_005923 [Vitis vinifera]
Length = 268
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M W+ SI + T KD+W+ +++ Y++ A +Q + ++
Sbjct: 9 MAWLWNSITPEISDTCMFLATTKDIWDAIQQTYSKARDA------------TQLSKTVTE 56
Query: 61 YFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y + + LW E + +I + P +++ +++ EQ + FL+ L P+++ R ++ +
Sbjct: 57 YANQLEALWQELDHYRVIKTKCPEDAIV-LKDFIEQDRVYDFLVGLNPEFDQVRIQILGK 115
Query: 119 -DLSPSLDVCFKE---LLR-EEQRLATQTILQQNKMHDNAIAYAAAHW---------KSK 164
++S CF E L+R EE R++ ++ + + D + A + K
Sbjct: 116 QEVS-----CFNEVVALIRGEEGRMS---VMLEPQTLDGSTLVAKTEYSEQEKNDLPKHL 167
Query: 165 GRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
GRD + KE + + +C +CKKP H ++C
Sbjct: 168 GRDNQ------WKENKDNL------WCTFCKKPRHTKEKC 195
>gi|147788360|emb|CAN74369.1| hypothetical protein VITISV_037867 [Vitis vinifera]
Length = 896
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 93 EQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDN 152
E ++ +FL L +++ R ++ R PS+ F E+ REE R + ++ K
Sbjct: 2 EDNRIFKFLAGLNVEFDEVRGRIIGRQPLPSIGEVFSEVRREESR---RNVMLGKK--GP 56
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCK--EYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+A + + G + F CK E H+ +C++C KP H + C
Sbjct: 57 GVAIKGSALVTMGGGYNKAAAFQCKSDERPHV-------WCDFCNKPRHTRENC 103
>gi|357504543|ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago truncatula]
gi|355497575|gb|AES78778.1| hypothetical protein MTR_7g045430 [Medicago truncatula]
Length = 483
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 52/215 (24%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W++ I S+ + T+ ++W LK+ +++ I +Y
Sbjct: 68 SWLINYISDSITQTIMFCDTSLEVWLDLKQSFSK----------------------IDHY 105
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLA----------DVQEVHEQSKRD-QFLMKLRPKYEA 110
F+ ++LW E + PI + A V ++H+ + QFL+ L ++
Sbjct: 106 FTKMKSLWEE----LSSHRPISNCACVHPCRCAASKVAKIHKNEDQIMQFLIDLNDQFSV 161
Query: 111 ARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAI-AYAAAHWKSKGRDMR 169
R+ ++ D PSL+ + +++EE A +I Q + D +I A + KS+GR
Sbjct: 162 VRTQVLLVDPLPSLNKVYSLVVQEESNNA--SINQLSVSEDTSIQVNATDNRKSQGRG-- 217
Query: 170 QVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ FS + +FC +C + H + C
Sbjct: 218 --KSFSQPK--------PTRFCTFCNRTNHTVDFC 242
>gi|147821596|emb|CAN74438.1| hypothetical protein VITISV_022954 [Vitis vinifera]
Length = 462
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 13 ILNLKLH-KTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQ-GNLSIQNYFSGFQNLWA 70
I+ L H K K++ +YL +Y++ R + + + G S+ YF F+ ++
Sbjct: 24 IVGLLSHCKFVKELMDYLDFLYSEKGHVSRMYDVWNAFHCPEKGAKSLTAYFMDFKKVYE 83
Query: 71 EYVDMIYVQVPIESLADVQEVH-EQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFK 129
E + +P VQ+ EQ FL L ++E A+S +++ SL F
Sbjct: 84 E----LNALMPFSPDVRVQQAQREQMVVMSFLSGLPSEFETAKSQILSGSDIGSLQEVFS 139
Query: 130 ELLREEQRLATQ---TILQQNKMHDNAIAY----AAAHWKSKGRDMRQVQCFSCKEYRHI 182
+LR E ++Q ++ + +NA ++++G D + CF C E H
Sbjct: 140 RVLRTENVSSSQHTNVLVAKGGNAENARRVNNRGGNRAFETRGNDSSTIVCFYCHEAGHT 199
Query: 183 VVKCAK 188
C K
Sbjct: 200 KKNCRK 205
>gi|449547240|gb|EMD38208.1| hypothetical protein CERSUDRAFT_113357 [Ceriporiopsis subvermispora
B]
Length = 673
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 172 QCFSCKEYRHIVVKCAKK-------FCNYCKKPGHIIKECPTRPQ 209
+C C+ H + C + CN CK+PGH +++CPT+ Q
Sbjct: 347 KCKICESTDHFISDCPDRAKPREGYICNICKEPGHFVRDCPTKHQ 391
>gi|147860339|emb|CAN81881.1| hypothetical protein VITISV_010825 [Vitis vinifera]
Length = 569
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 35/224 (15%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W+M S++ ++ L AK +W+ + Y++ +N+++ L + QG +
Sbjct: 1 MAWLMHSMEDNIANTYILIPKAKRIWDAVTLAYSKLENSSQMFELRNKARNLRQGEHDVT 60
Query: 60 NYFSGFQNLWAEYVDMIYVQV---PIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLM 116
Y+ LW E +D+ P +++ + + E + FL L + R +
Sbjct: 61 QYYIDLTKLWQE-LDLFNSPAWKDPDDAIL-YRNMVESDRIYDFLAGLNKGLDDVRGRPL 118
Query: 117 NRDLSPSLDVCFKELLREEQR----LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQ 172
P ++ F E+ REE R L TI + + + +A ++ +++ R
Sbjct: 119 GFKPLPQIEEIFVEIRREECRQCVTLGGSTI---STIETSTLAARGSNNRAESRG----- 170
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC---PTRPQNCQA 213
KK+C++C+KP H C +P QA
Sbjct: 171 --------------NKKWCDHCQKPNHTKDTCWKLHGKPTGLQA 200
>gi|110288905|gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1050
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 3 WIMGSIDQSLI-LNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W+ GS+ +++ + ++ +TA+D+W + ++ + + +L +E +QG++ I +Y
Sbjct: 91 WLFGSVSDAILDVVMETDQTARDLWLAIDDLFQANKEPRTIYLSHEFHSMTQGDMPIADY 150
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADV-QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
V+ ++L DV V E L L ++ + N+ + +
Sbjct: 151 CQK-------------VKTAADALRDVGHPVTESQLVLNLLSGLNSRFSSTADNIASAPV 197
Query: 121 SPSLDVCFKELLREEQRLATQTILQ 145
PS LL +E R+A +Q
Sbjct: 198 LPSFASAHNTLLLKELRIANAHKVQ 222
>gi|154286678|ref|XP_001544134.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407775|gb|EDN03316.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 964
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H +KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCVAKEHDVKECPARKAGEQPS 341
>gi|147810137|emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
Length = 1194
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 26/229 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
+I++ ++ +++ KT + W K++++ N + LE E+ +Q +L+I +YF +
Sbjct: 72 TIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIAQRDLTITHYFHKVK 131
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDV 126
L E + + ++ PI E + + LRPK+ + + PSL V
Sbjct: 132 TLCRE-ISELDLEAPI---------GETRMKRIIIHGLRPKFRGFVAAIQGWQNQPSL-V 180
Query: 127 CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK----GRDMR-QVQCFSCKEYRH 181
F+ LL ++ LA Q K + A+ W SK GR + + + + R
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKGRWNSKQHTVGRTKKNEDKAKXSQGERS 240
Query: 182 IVVKCAKKF----------CNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
V+ K C C K GH+ K+C ++ +++ A S
Sbjct: 241 ARVEGDSKNPXTRKKXEGKCYNCGKKGHMAKDCWSKKGLVESNAATSES 289
>gi|46518391|gb|AAS99677.1| At1g21220 [Arabidopsis thaliana]
gi|48310400|gb|AAT41813.1| At1g21220 [Arabidopsis thaliana]
Length = 227
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
+W+M S+ + L + +TA WE L+ + K L +A Q S+ Y
Sbjct: 83 SWMMSSLSEELRSYVTFSETAHKAWEDLRVEFVPSVDFKIYELRQRLAVLRQDGDSVGRY 142
Query: 62 FSGFQNLWAEYVDMIYVQVP----IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
F+ F W E ++ V +P E +E E+ +R FLM L R+ +M
Sbjct: 143 FAKFMRAWVELLEYDPV-LPECCDCEIAKRAKEAREKDQRYAFLMGLDNGLSNVRTQIML 201
Query: 118 RDLSPSLDVCFKELLREEQRLAT 140
+ PSL F L + E + +
Sbjct: 202 MNPLPSLHQAFVMLDQAESMMKS 224
>gi|443694199|gb|ELT95392.1| hypothetical protein CAPTEDRAFT_179303 [Capitella teleta]
Length = 363
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 168 MRQVQCFSCKEY-RHIVVKCAK----KFCNYCKKPGHIIKECPTR 207
R+++C++C ++ HI KC + K C++CK GH+I +CP +
Sbjct: 110 FRKIRCYNCGDFGNHIAAKCPQGPLPKRCHFCKSSGHLIADCPDK 154
>gi|912562|gb|AAB38057.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCSKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|21671985|gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 3 WIMGSIDQSLI-LNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W+ GS+ +++ + ++ +TA+D+W + ++ + + +L +E +QG++ I +Y
Sbjct: 91 WLFGSVSDAILDVVMETDQTARDLWLAIDDLFQANKEPRTIYLSHEFHSMTQGDMPIADY 150
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADV-QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
V+ ++L DV V E L L ++ + N+ + +
Sbjct: 151 CQK-------------VKTAADALRDVGHPVTESQLVLNLLSGLNSRFSSTADNIASAPV 197
Query: 121 SPSLDVCFKELLREEQRLATQTILQ 145
PS LL +E R+A +Q
Sbjct: 198 LPSFASAHNTLLLKELRIANAHKVQ 222
>gi|23477804|gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 3 WIMGSIDQSLI-LNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W+ GS+ +++ + ++ +TA+D+W + ++ + + +L +E +QG++ I +Y
Sbjct: 91 WLFGSVSDAILDVVMETDQTARDLWLAIDDLFQANKEPRTIYLSHEFHSMTQGDMPIADY 150
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADV-QEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
V+ ++L DV V E L L ++ + N+ + +
Sbjct: 151 CQK-------------VKTAADALRDVGHPVTESQLVLNLLSGLNSRFSSTADNIASAPV 197
Query: 121 SPSLDVCFKELLREEQRLATQTILQ 145
PS LL +E R+A +Q
Sbjct: 198 LPSFASAHNTLLLKELRIANAHKVQ 222
>gi|912556|gb|AAB38054.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|396077166|dbj|BAM33594.1| Gag-Pol precursor polyprotein [Felis catus]
Length = 1748
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 185 KCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVA 219
K K C YCK+ GH IK+CP RP N + +V+A
Sbjct: 518 KVGKDQCAYCKERGHWIKDCPKRPGNSKKPASVLA 552
>gi|396077163|dbj|BAM33593.1| Gag-Pol precursor polyprotein [Felis catus]
Length = 1749
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 185 KCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVA 219
K K C YCK+ GH IK+CP RP N + +V+A
Sbjct: 518 KVGKDQCAYCKERGHWIKDCPKRPGNSKKPASVLA 552
>gi|147828689|emb|CAN77571.1| hypothetical protein VITISV_008517 [Vitis vinifera]
Length = 709
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ + + + ++ K++W+ K+ Y +++NT S+G L I
Sbjct: 77 MSWLVNYMANEIGEDFMFYEMTKEIWDATKETYSDKENT-------------SRGELIIT 123
Query: 60 NYFSGFQNLWAEY--VDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
YF+ W D + P D + + +FL L + R ++
Sbjct: 124 QYFNALNRCWQHLYLFDENKLGCP-----DCLRKLLRRRVFKFLFGLNKNLDEVRGRILG 178
Query: 118 RDLSPSL-DVCFKELLREEQRLATQTILQQNKMHDNAIAYA-AAHWKSKGRDMRQVQCFS 175
PS+ + CF E+ REE R Q ++Q ++ + A AAH D Q
Sbjct: 179 TKPLPSIQEACF-EVRREESR---QKVMQGKTSSTSSESSALAAH------DSNQ----- 223
Query: 176 CKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
Y + K + +CN+C KPGH C
Sbjct: 224 -SAYDNKQKKNGRPWCNHCHKPGHTKDRC 251
>gi|912574|gb|AAB38063.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|147767213|emb|CAN73395.1| hypothetical protein VITISV_003815 [Vitis vinifera]
Length = 1036
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 188 KKFCNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
KKFCNYCK+PGH IK C C S VA+
Sbjct: 144 KKFCNYCKRPGHTIKTC----YRCNKSTVAVAN 172
Score = 41.2 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
+TWI + S+ L AK W+ L K R G SI +
Sbjct: 30 LTWIQNTSISSISNLLGSFDDAKSAWDMLAK------------------RQEPGQ-SIND 70
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLA-DVQE---VHEQSKRDQFLMKLRPKYEAARSNLM 116
Y+ + +W D I + P + + D Q+ + ++ + +FLM L +E R L+
Sbjct: 71 YYDQLRFIW----DQIDLSDPTWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPIRGQLL 126
Query: 117 NRDLSPSLDVCFKEL 131
NR +PSLD EL
Sbjct: 127 NRSPAPSLDTAVNEL 141
>gi|912554|gb|AAB38053.1| gag polyprotein, partial [Human immunodeficiency virus 1]
gi|912564|gb|AAB38058.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|912570|gb|AAB38061.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|912566|gb|AAB38059.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C K+ C C + GH +KECP R N
Sbjct: 384 RNQRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQAN 431
>gi|147854508|emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]
Length = 314
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 14/207 (6%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKV-YNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+ ++ TA+++W L K Y+ + + L + Q + S+ Y
Sbjct: 73 WLLMSMSPEIMKRYLRLPTAQEIWSALSKAFYDGSDELQVFTLNQKAFTAKQNDKSLSEY 132
Query: 62 FSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+ L+ E + D + ++ P E +A ++ E+ + + FL L +E R ++ +D
Sbjct: 133 YGELTELFCELDHRDKVVMKDP-EDIAAYRKSIERQRVNIFLAGLGGDFEQVRGEILRKD 191
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAY--AAAHWKSKGRDMRQVQCFSCK 177
P L+ C+ + RE R A+ N + + +W+ Q + K
Sbjct: 192 PLPDLEECYALIRREAVRHASMKAESNNPDTSAMVVRQQSTRNWQD------QSKTNHSK 245
Query: 178 EYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+I K C +C K GH C
Sbjct: 246 TNPNIDKSTFK--CTHCNKTGHTKSRC 270
>gi|4996365|dbj|BAA78425.1| polyprotein [Arabidopsis thaliana]
gi|338746551|dbj|BAK41505.1| polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis thaliana]
gi|338746557|dbj|BAK41508.1| polyprotein [Arabidopsis thaliana]
gi|338746559|dbj|BAK41509.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ + TA +WE L+K+Y + + ++ ++++G +I +Y
Sbjct: 69 VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQFRTQLKQWTKGTKTIDDYMQ 128
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E L +Y+ + +D P+
Sbjct: 129 GFV---THFDQLALLGKPMDHDEQVERVLEN---------LPEEYKPVIDQIAAKDTPPT 176
Query: 124 LDVCFKELLREEQRL 138
L + LL +E ++
Sbjct: 177 LTEIHERLLNQESKI 191
>gi|147860686|emb|CAN83567.1| hypothetical protein VITISV_030380 [Vitis vinifera]
Length = 567
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHL-----EYEIARYSQGNLSI 58
+ ++ S+ + + +A ++WEYLK+ Y K + E+E+ + + + ++
Sbjct: 49 LFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGXERIKNMQVMNLIREFEMKKMRESD-AV 107
Query: 59 QNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN- 117
++Y + ++ A+ V ++ + E + VQ++ L+ L KYEA S+L N
Sbjct: 108 KDYAAQLLSI-ADKVRLLGKEFSNEKI--VQKI---------LVTLPEKYEATISSLENS 155
Query: 118 RDLSPSLDVCFKELLR-----EEQRL---------ATQTILQQNKMHDNAIAYAAAHWKS 163
+DLS + ELL E++RL A Q +Q+N H N +
Sbjct: 156 KDLS---TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNEKMNNNKPCSN 212
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN--------CQ 212
++ C CK+ H KC CN C K GH+ + C + Q CQ
Sbjct: 213 NQKNGVFPPCPHCKKTNHSPQKCWWRPDVKCNKCGKQGHVERICKNQQQEETSAAVDYCQ 272
Query: 213 ASQAVVAS 220
Q A+
Sbjct: 273 EEQLFAAT 280
>gi|320038187|gb|EFW20123.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 559
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 117 NRDLSPSLDVCFKELLREE---QRLATQTILQQNKMHDNAIAYAAAHWKSK-------GR 166
N + P D+ F L E +R ++ + + NAI YA W + R
Sbjct: 313 NYTVIPKADISFVGWLTRESPNKRASSIVVEFTDPEMANAIIYAGMVWDGQIHTCQLYDR 372
Query: 167 DMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECP 205
R QCF C Y HI +C A + C YC + H K CP
Sbjct: 373 ACRVKQCFRCYNYGHISTQCDAAQACGYCAE-LHETKTCP 411
>gi|260935368|gb|ACX54356.1| gag polyprotein [Equine infectious anemia virus]
Length = 427
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG +R Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 374 KGGPLRAKQTCYNCGKQGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKN 422
>gi|338746555|dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ + TA +WE L+K+Y + + ++ ++++G +I +Y
Sbjct: 69 VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQFRTQLKQWTKGTKTIDDYMQ 128
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GF + + + P++ V+ V E L +Y+ + +D P+
Sbjct: 129 GFV---THFDQLALLGKPMDHDEQVERVLEN---------LPEEYKPVIDQIAAKDTPPT 176
Query: 124 LDVCFKELLREEQRL 138
L + LL +E ++
Sbjct: 177 LTEIHERLLNQESKI 191
>gi|218188731|gb|EEC71158.1| hypothetical protein OsI_02999 [Oryza sativa Indica Group]
Length = 326
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 3 WIMGSIDQSLILNLKL---HKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQ 59
WI+ ++D S +L+L + ++TA+++W ++ ++ + + L E QG+ SI
Sbjct: 93 WILNTVDDS-VLDLAITDENQTARELWVAIEGLFRSNRAPRAVFLLEEFHSLKQGDSSID 151
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMK-LRPKYEAARSNLMNR 118
EY + ++ +L DV E S+ L++ L P+Y A ++ N
Sbjct: 152 -----------EYCQRLKIKA--AALRDVGHTIEDSQLVLSLLRGLNPRYTATADDIANS 198
Query: 119 DLSPSLDVCFKELLREEQRLA 139
+ PS + L +E RLA
Sbjct: 199 TVLPSFSRAREMLSLKELRLA 219
>gi|308809325|ref|XP_003081972.1| putative DAK2 domain containing protein (ISS) [Ostreococcus tauri]
gi|116060439|emb|CAL55775.1| putative DAK2 domain containing protein (ISS), partial
[Ostreococcus tauri]
Length = 843
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTR 207
C +C E HI +C K + C CK+ GHI KECP +
Sbjct: 154 CRNCGEEGHIAKECPKPQMCRICKQEGHIAKECPNQ 189
>gi|77549335|gb|ABA92132.1| hypothetical protein LOC_Os11g10730 [Oryza sativa Japonica Group]
gi|125576588|gb|EAZ17810.1| hypothetical protein OsJ_33352 [Oryza sativa Japonica Group]
Length = 127
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKR-SHLEYEIARYSQGNLSIQ 59
M +I S+D ++ + K H +AK+MW YLK+ Y Q++ A R S L+ Q N SI+
Sbjct: 47 MGFIFMSVDVAIRIGFKAHTSAKEMWNYLKQRYTQESGALRFSLLQNLNNLQQQQNQSIE 106
Query: 60 NYFSGFQNLWAEY 72
+++ F L ++
Sbjct: 107 EFYNVFTRLTGQF 119
>gi|339786565|gb|AEK11449.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+C RP N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERPAN 428
>gi|449474397|ref|XP_004154160.1| PREDICTED: uncharacterized protein LOC101211799 [Cucumis sativus]
Length = 261
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 48 IARYSQGNLSIQNYFSGFQNLWAE-YVDMIYVQVPIESLADV----QEVHEQSKRDQFLM 102
IA + QGN SI++YF + LW E I+ P S + + E+ K QFL+
Sbjct: 156 IASHRQGNTSIKSYFKNLKALWDEAAASSIHTNSPQSSSNNTTVEQSGLMEREKLMQFLL 215
Query: 103 KLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQ 136
L Y + S ++ SP++D + ++ EE+
Sbjct: 216 GLNDSYSSLCSQILLERPSPTVDQAYSLIILEEK 249
>gi|147818951|emb|CAN67123.1| hypothetical protein VITISV_040164 [Vitis vinifera]
Length = 982
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+ + +KT W K +Y D + + I Q ++ + Y
Sbjct: 43 SVDPKILLHFRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVKQQDMDLSTYIGQIA 101
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQF-----LMKLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ + Q H D+F L+ R E R ++
Sbjct: 102 SLKEEFLTVM----PLTTDVGDQRTHI----DKFFIVLMLIGFRSDLETVRDQILGSSSV 153
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD LR +TQT L + D+ + + + + R
Sbjct: 154 PSLDDVLARFLRIS---STQT-LSFDNTSDSFVLVSQTNSRGGRSGNRG----------- 198
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
K + C YC K GH C
Sbjct: 199 ---KGQRPHCTYCNKLGHTRDRC 218
>gi|282598114|gb|ADA83346.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S R R ++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 373 RSNFRGQRTIKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCPERQAN 424
>gi|402694377|gb|AFQ90122.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 488
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 27/172 (15%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LADVQEVHEQSKRDQFLMK-L 104
G QN G + + ++VD + Q+ E L D + ++ + M+ L
Sbjct: 271 GKPKAQNIRQGPKEPYPDFVDRLLSQIKSEGHPSEITKFLTDTLTIQNANEECKTAMRHL 330
Query: 105 RPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK 164
RP+ RD+ TQ ++ + + +A K
Sbjct: 331 RPEDTLEEKLYACRDIG----------------TTTQKMMLLARALQSGLAGPMNGGTFK 374
Query: 165 GRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQAS 214
G ++ Q C++C + H+ +C A K C CK+PGH K+C P+N +
Sbjct: 375 GGPLKAKQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKNGRTG 426
>gi|126542355|gb|ABO16609.1| gag protein [Feline immunodeficiency virus]
gi|134284782|gb|ABO69475.1| gag [Feline immunodeficiency virus]
Length = 461
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E+VD ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + + K K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQIKPK 374
Query: 165 GRDMRQ---VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
G + + ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GGNSPRRGPLKCFNCGKLGHMAKNCRAPKRCNKCGKTGHISTDC 418
>gi|119187857|ref|XP_001244535.1| predicted protein [Coccidioides immitis RS]
gi|392871250|gb|EAS33143.2| hypothetical protein CIMG_03976 [Coccidioides immitis RS]
Length = 508
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 117 NRDLSPSLDVCFKELLREE---QRLATQTILQQNKMHDNAIAYAAAHWKSK-------GR 166
N + P D+ F L E +R ++ + + NAI YA W + R
Sbjct: 262 NYTVIPKADISFVGWLTRESPNKRASSIVVEFTDPEMANAIIYAGMVWDGQIHTCQLYDR 321
Query: 167 DMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECP 205
R QCF C Y HI +C A + C YC + H K CP
Sbjct: 322 ACRVKQCFRCYNYGHISTQCDAAQACGYCAE-LHETKTCP 360
>gi|147817207|emb|CAN70866.1| hypothetical protein VITISV_027609 [Vitis vinifera]
Length = 759
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 17 KLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDM 75
+ + TAK+MW+ L Y + +N+A+ L+ QG L + YF+ LW +
Sbjct: 17 QYYSTAKEMWDALTLAYLDLENSAQLFELQNRACDLKQGELDVAQYFNALTRLWQDI--N 74
Query: 76 IYVQVP 81
+YVQ+P
Sbjct: 75 LYVQIP 80
>gi|147846217|emb|CAN79491.1| hypothetical protein VITISV_033372 [Vitis vinifera]
Length = 293
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W++ +++ + N + TAK++W+ + ++Y+ N ++ LE ++ QGN ++
Sbjct: 88 MDWLLNVMEEDISANYMCYSTAKELWDNINQMYSDFGNKSQVYELEMKLREIQQGNNTVT 147
Query: 60 NYFSGFQNLWAE 71
YF+ + LW +
Sbjct: 148 KYFNTLKGLWQD 159
>gi|27227831|dbj|BAC45013.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 871
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 383 RIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCPERQAN 427
>gi|147798853|emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
Length = 973
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
+I++ ++ +++ KT + W K++++ N + LE E+ +Q NL+I YF +
Sbjct: 7 TIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLLVAQCNLTIAQYFHKVK 66
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDV 126
L E ++ ++ PI E + + LRP+ + + PSL V
Sbjct: 67 TLCREIFELD-LEAPI---------GETRMKRIIIHGLRPELRGFVAAVQGWKNQPSL-V 115
Query: 127 CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK----GRDMR-QVQCFSCKEYRH 181
F+ LL ++ LA Q K + A+ W SK GR + + + S + R
Sbjct: 116 EFENLLAGQEALAKQMGGVSLKGEEKALYAHKGRWNSKQHTVGRTKKNEDKAKSSQGERS 175
Query: 182 IVVK-------CAKKF---CNYCKKPGHIIKEC 204
VK KKF C C+K G + K+C
Sbjct: 176 ARVKGDSKNLGTRKKFQGRCYNCRKKGXMAKDC 208
>gi|147797305|emb|CAN73741.1| hypothetical protein VITISV_026083 [Vitis vinifera]
Length = 300
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 13/187 (6%)
Query: 21 TAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQNYFSGFQNLWAE--YVDMIY 77
T +D+WE +++ Y++ A H ++ +I Q + Y + ++LW E Y I
Sbjct: 86 TTRDIWETIRQTYSKVRDAXHIHKIKTKIGATKQDTFVVTKYNNIMKSLWLELDYYQNIK 145
Query: 78 VQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQR 137
++ E A + + + + +FL+ L +Y+ + ++ ++ P L+ + EE R
Sbjct: 146 MKCS-EDAAMMLKFVQSXRXFEFLVGLNVEYDQVKVQVLGKEDLPHLNEVLSIIRAEEGR 204
Query: 138 LATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKP 197
N M D + +K E + +C YCKKP
Sbjct: 205 ---------NAMLDTPTTESPGLVTTKPNSTLLNNNXGGSEVSRSPINKNALWCVYCKKP 255
Query: 198 GHIIKEC 204
H + C
Sbjct: 256 RHTKETC 262
>gi|410131096|gb|AFV61763.1| gag protein [Equine infectious anemia virus]
Length = 483
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 25/167 (14%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LADVQEVHEQSKRDQFLMK-L 104
G QN G + + ++VD + Q+ E L D +H ++ + M+ L
Sbjct: 270 GKPKAQNIRQGPKEPYPDFVDRLLSQIKSEGHSPDITKFLTDTLTIHNANEECRSAMRHL 329
Query: 105 RPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK 164
RP+ RD+ + Q++A L + + A
Sbjct: 330 RPEDTLEEKMYACRDVG-----------SQRQKMA----LLAKALQTGLVGPMKAGVLKG 374
Query: 165 GRDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
G + C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 375 GPLKAKQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCKQNPKN 421
>gi|343416463|emb|CCD20360.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 416
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 162 KSKGRDM----RQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRP 208
K G DM + QC C + H+VVKC + CN+C + GH+ C P
Sbjct: 55 KEPGHDMAKSLQSPQCHMCNQTGHLVVKCPEVLCNWCHQKGHMASACKMSP 105
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKK-FCNYCKKPGHIIKECPTR 207
Q +CF+C + H CA K C +C PGH ECP +
Sbjct: 7 QTRCFNCGHFGHSSQLCASKPVCFHCFMPGHTSTECPRK 45
>gi|146400059|gb|ABQ28727.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQ 209
+ +A A KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+
Sbjct: 359 SGLAGAMKGGIMKGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCRNTPK 418
Query: 210 NC-QASQA 216
N Q +Q
Sbjct: 419 NGKQGAQG 426
>gi|77550934|gb|ABA93731.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 639
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W+M S+ S+ ++ + A +W+ L +Y + N + ++ Q ++Q
Sbjct: 147 VSWLMTSVAPSIGRMIEAIQNAAVVWKTLSNMYSGEGNVMMMVEAQNKVENLKQEGRTVQ 206
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKR-DQFLMKLRPKYEAARSNLMNR 118
Y S Q LWA+ +Q+ E + Q +R FL L ++E R+ + ++
Sbjct: 207 EYASELQQLWADLDHYDPLQLKHEDDIVIGNKWLQRRRVIHFLKGLNKEFEDRRAAMFHQ 266
Query: 119 DLSPSLDVCFKELLREEQRL 138
P+++ +++EE RL
Sbjct: 267 ATLPTMEEAISAMMQEEMRL 286
>gi|14475941|gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G L + + + P++ V+ V E L +Y+ + +D P+
Sbjct: 148 G---LVTRFDQLALLGKPMDHDEQVERVLEN---------LPEEYKPVIDQIAAKDTPPT 195
Query: 124 LDVCFKELLREEQRL 138
L + LL E ++
Sbjct: 196 LTEIHERLLNHESKI 210
>gi|14475946|gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ + TA +WE L+K+Y + + L ++ ++++G +I +Y
Sbjct: 88 VLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQ 147
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G L + + + P++ V+ V E L +Y+ + +D P+
Sbjct: 148 G---LVTRFDQLALLGKPMDHDEQVERVLEN---------LPEEYKPVIDQIAAKDTPPT 195
Query: 124 LDVCFKELLREEQRL 138
L + LL E ++
Sbjct: 196 LTEIHERLLNHESKI 210
>gi|147782131|emb|CAN72054.1| hypothetical protein VITISV_031315 [Vitis vinifera]
Length = 1024
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 44 LEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMI--YVQVPIESLADVQEVHEQSKRDQFL 101
L ++ QG ++ YF+ + +W + +D+ Y E ++ E ++ +FL
Sbjct: 144 LTLKLGEIRQGEDNVTKYFNSLKRIWQD-LDLFNTYEWKSTEDGLHHKKTMEDNRIFKFL 202
Query: 102 MKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHW 161
K++ R ++ R P + F E+ REE R + ++ K +A +
Sbjct: 203 AGFNVKFDEVRGRIIGRQPLPLIGEVFSEVRREESR---RNVMLGKK--GPGVAIEGSAL 257
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ G +V F K + +C++C KP H + C
Sbjct: 258 VTTGGGYNKVATFQRKSDER-----PRVWCDFCNKPRHTCENC 295
>gi|166026124|gb|ABY78372.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 153 AIAYAAAHWKSKG--RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPT 206
A AA KG R+ R+ ++CF+C + H+ C KK C C + GH +KECPT
Sbjct: 370 ATGSAATIMMQKGNFRNQRKTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECPT 429
Query: 207 RPQN 210
R N
Sbjct: 430 RQAN 433
>gi|160337083|gb|ABX25829.1| gag protein [Feline immunodeficiency virus]
Length = 502
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + +++++D +Y Q I+ + EV K+ L P+ + A S+L + SP
Sbjct: 307 GPKEDYSQFIDRLYAQ--IDQEQNSPEVKLYLKQSLSLANANPECKRAMSHL--KPESP- 361
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKG------RDMRQVQC 173
+E LR Q + T +L Q ++ A+ + KG R + +C
Sbjct: 362 ----LEEKLRACQEIGTTPYKMNMLAQALQNNGCNQVMQANVRPKGSQQGNRRPGQSFKC 417
Query: 174 FSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
F+C + H+ +C A + CN C K GHI +C
Sbjct: 418 FNCGKPGHLSRQCRAPRKCNTCGKAGHISTDC 449
>gi|147839927|emb|CAN74901.1| hypothetical protein VITISV_010116 [Vitis vinifera]
Length = 844
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSH-LEYEIARYSQGNLSIQ 59
M W S+ + TAKD+W+ +++ Y++ A + + ++ + QG+ ++
Sbjct: 34 MAWSWNSMTPEISDTCMFLATAKDIWDTIQQTYSKARDAAQVYEVKVKTIAAKQGSKTVT 93
Query: 60 NYFSGFQNLWAEYVDMIYVQVP-IESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNR 118
Y + + LW E ++ +E +++ EQ + FL++L P+++ R ++++
Sbjct: 94 EYANQLKALWQELDHYRVIKTKCLEDFVVLKDFIEQDRVYDFLVRLNPEFDQVRIQILSK 153
Query: 119 DLSPSLDVCFKELLREEQRLA 139
P CF E +R+
Sbjct: 154 QEVP----CFNEEQGSGRRIG 170
>gi|91083993|ref|XP_975245.1| PREDICTED: similar to AGAP006591-PA [Tribolium castaneum]
Length = 195
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 168 MRQVQCFSCKEY-RHIVVKCA----KKFCNYCKKPGHIIKECPTR 207
R+++C++C E+ HI KC K C+ CK H+I +CPTR
Sbjct: 123 FRKIRCYNCGEFANHIAAKCTMGPQPKRCHNCKSEDHLIADCPTR 167
>gi|357619173|gb|EHJ71850.1| zinc finger protein [Danaus plexippus]
Length = 144
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 98 DQFLMKLRPK-YEAARSNLMNRDLSPSLDVCFK-ELLREEQRLATQTILQQNKMHDNAIA 155
D + R K ++ R+ RD D C++ R Q+ + + + N
Sbjct: 28 DAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG 87
Query: 156 YAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
+ A + GRD C++C + HI C K C C KPGHI ++C
Sbjct: 88 HIARNCPEGGRDNSNQTCYNCNKTGHISRNCPDGTKTCYVCGKPGHISRDC 138
>gi|147807757|emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI S+ ++ + +T+ + W L++ ++ A+ L +G+L++
Sbjct: 45 LSWIYSSLTPDVMRQIVGLQTSHEAWTALQQSFSASTKARTMQLRLAFQTTKKGSLTMME 104
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQE-VHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y +++ +SLA + E V E+ + Q L L +Y ++L RD
Sbjct: 105 YIQKLKHI-------------SDSLAAIGEPVPEKDQILQLLSGLGAEYNPIVASLTARD 151
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAH 160
L LL EQRL QT + D IA A H
Sbjct: 152 DDIQLHAVHSILLTHEQRLHLQTTATE---EDLLIANFATH 189
>gi|341868845|gb|AEK98540.1| gag protein [Equine infectious anemia virus]
Length = 426
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 373 KGGPLKAKQTCYNCGKPGHLSSQCRAPKLCFKCKEPGHFSKQCKNAPKN 421
>gi|147843452|emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 31/194 (15%)
Query: 24 DMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPI- 82
++WE +K+ ++ N + L+ + Q I Y+ ++LW E + Y +P+
Sbjct: 62 ELWEEIKQQFSIGNGPRVQQLKSYLVNCKQEGQGIIVYYGKLKSLWDELNN--YDSIPVC 119
Query: 83 -------ESLADVQEVHEQSKRDQFLMKL-RPKYEAARSNLMNRDLSPSLDVCFKELLRE 134
+ +++ E+ + QFLM L Y RSN+++ + +L+ + ++++
Sbjct: 120 TCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEPLSNLNRVYAMIVQQ 179
Query: 135 EQ-RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNY 193
E+ R T+T ++ A+ + G+D + C+
Sbjct: 180 ERVRTMTRTKEERGSPMSFAVQVGGRNPGGDGKDKTVI-------------------CSN 220
Query: 194 CKKPGHIIKECPTR 207
CK+ GH + C R
Sbjct: 221 CKRKGHEVDSCFQR 234
>gi|374349456|gb|AEZ35326.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 379 RSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPGRQAN 423
>gi|341868843|gb|AEK98539.1| gag protein [Equine infectious anemia virus]
Length = 426
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG +R Q C++C + H +C A K C C++PGH K+C +P+N
Sbjct: 373 KGGPLRAPQTCYNCGKPGHFSSQCRAPKVCFKCRQPGHFSKQCKDQPKN 421
>gi|126542353|gb|ABO16608.1| gag protein [Feline immunodeficiency virus]
gi|134284775|gb|ABO69469.1| gag [Feline immunodeficiency virus]
Length = 461
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRP 106
E+ + G N G + +++E++D ++ Q+ ES Q+V + K + P
Sbjct: 265 ELRKIRAGAPRAVNVKQGPKEIYSEFIDRLFKQIEAESAP--QDVKQYLKDSLSISNANP 322
Query: 107 KYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHD--NAIAYAAAHWKSK 164
+ + A S+L D ++ +R Q + + T + N + + K K
Sbjct: 323 ECKRAMSHLRPEDK-------LEDKIRACQDIGS-TAYKMNMLAQALQQVRVQQVQIKPK 374
Query: 165 GRDMRQ---VQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
G + + ++CF+C + H+ C A K CN C K GHI +C
Sbjct: 375 GGNSPRRGPLKCFNCGKLGHMAKNCRAPKRCNKCGKTGHISTDC 418
>gi|358389553|gb|EHK27145.1| hypothetical protein TRIVIDRAFT_188061 [Trichoderma virens Gv29-8]
Length = 458
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 172 QCFSCKEYRHIVVKCAK---KFCNYCKKPGHIIKECPTRP 208
+CF C E H +C K + C+YCKK GH+ K+CP P
Sbjct: 68 KCFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCPEAP 107
>gi|147810497|emb|CAN74104.1| hypothetical protein VITISV_008952 [Vitis vinifera]
Length = 1211
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 46/199 (23%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++ +L+ +KT W K +Y D + + I Q ++ + Y
Sbjct: 78 SVDPKILHHLRAYKTCFKFWNQAKGLYTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKR-DQFLMKLRPKYEAARSNLMNRDLSPSLD 125
+L E++ M+ P+ + +V +Q ++ D+F M L ++++ PSLD
Sbjct: 137 SLKEEFLTMM----PLTT-----DVGDQRRQIDKFFMVL-----TLIASILGSSSVPSLD 182
Query: 126 VCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVK 185
F LLR +TQT+ N D+++ ++GR R
Sbjct: 183 DVFAHLLRIS---STQTLPSDNT-SDSSV-------DNRGRGQR---------------- 215
Query: 186 CAKKFCNYCKKPGHIIKEC 204
C YC K GH C
Sbjct: 216 ---PHCTYCNKLGHTRDRC 231
>gi|254667176|gb|ACT76540.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+D ++++CF+C H+ C KK C C K GH +K+CP R
Sbjct: 383 KDQKRIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKDCPER 427
>gi|297740978|emb|CBI31290.3| unnamed protein product [Vitis vinifera]
Length = 1201
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++WI S+ ++ + +T+ + W L++ ++ A+ L +G+L++
Sbjct: 189 LSWIYSSLTPDVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSLTMME 248
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQE-VHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
Y +++ +SLA + E V E+ + Q L L +Y ++L RD
Sbjct: 249 YIQKLKHI-------------SDSLAAIGEPVPEKDQILQLLSGLGAEYNPIIASLTTRD 295
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAH 160
L LL EQRL QT + D IA A H
Sbjct: 296 DDIQLHAVHSILLTHEQRLPLQTTPTEE---DLLIANFATH 333
>gi|158828152|gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 3 WIMGSIDQSLILN-LKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNY 61
WI G+I +S+I LK + TA+++W ++ ++ + A+ LE E+ G+LS+ +Y
Sbjct: 76 WIYGTISESIIDTVLKKNSTARELWLAIETLFLDNKEARALQLENELRTMVIGDLSVHDY 135
Query: 62 FSGFQNL 68
+NL
Sbjct: 136 CKKMKNL 142
>gi|384494339|gb|EIE84830.1| hypothetical protein RO3G_09540 [Rhizopus delemar RA 99-880]
Length = 1311
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 146 QNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA-----KKFCNYCKKPGHI 200
N D+ Y A+WK C C E H +C K+ C YC KPGHI
Sbjct: 1086 HNPETDDCSVYIHAYWKEM-----PTYCKYCHELGHSASECQQAPSNKRVCYYCYKPGHI 1140
Query: 201 IKECPTR 207
+CP +
Sbjct: 1141 RVQCPDK 1147
>gi|254667164|gb|ACT76532.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+D ++++CF+C H+ C KK C C K GH +K+CP R
Sbjct: 383 KDQKRIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKDCPER 427
>gi|147780359|emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
Length = 1031
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/210 (17%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
++W+ S+ + + ++ H+T ++W L + ++Q + + L+ +I ++QG+ +Q
Sbjct: 91 ISWLSNSVCKEISESILYHETTIEIWNDLYERFHQGSGPRIFELKQKILAHTQGSADLQE 150
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD---QFLMKLRPKYEAARSNLMN 117
+ + +P+ + ++ E +R+ QFL+ L + R+ ++
Sbjct: 151 FKA----------------IPVCNCGGMRVYMEDQQRESVMQFLLGLNESFIPIRAQILL 194
Query: 118 RDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAA---AHWKSKGRDMRQVQCF 174
+ +P L+ F +++EE++ + T N+ A+ A + +++ R
Sbjct: 195 MEPTPLLNKVFSLVVQEERQRSLTT--------SNSPAFTAPVSSRFQAASRASSPTNSS 246
Query: 175 SCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
++ R C +C GH + +C
Sbjct: 247 RSRKDR--------PLCTHCNILGHTVDQC 268
>gi|189182786|gb|ACD81986.1| gag protein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 373 KGGSLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 421
>gi|159505443|gb|ABW97698.1| gag protein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGSLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|342868689|gb|EGU72833.1| hypothetical protein FOXB_16658 [Fusarium oxysporum Fo5176]
Length = 1302
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTR-----PQNCQASQAV 217
R R QCF C +Y HI +C A C YC + H ++CPT+ P+ C A V
Sbjct: 335 RQCRVRQCFQCHKYGHIGTQCKATITCGYCAQE-HPTRDCPTKSDRDAPRKCAACNGV 391
>gi|357118033|ref|XP_003560764.1| PREDICTED: uncharacterized protein LOC100834266 [Brachypodium
distachyon]
Length = 441
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+ ++ +++ +A +W L K Y + N S +E ++ QG+ ++ +Y
Sbjct: 105 WMLNSLVPAIAASVEALPSASVVWNQLSKRYSGKGNLMLMSQIEDKVHDVRQGDKTVMDY 164
Query: 62 FSGFQNLWAEY--VDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
+ Q+L A+ D + + P +S+ + E+ + +FL L YE R+ ++++
Sbjct: 165 VNELQHLRADLKQCDPLELSDP-KSMEIARAWVERRRVMKFLKGLDQGYEGRRATMLHQP 223
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAA---HWKSKGRDMRQVQCFSC 176
SLD + +EE LQ K N A+ W+ ++ R C++C
Sbjct: 224 ELTSLDEAIAAMSQEE------VHLQFKKGGGNESAFKVTDQRQWEPTWKETR--DCYNC 275
Query: 177 KEYRHIVVKCAKKFCNYCKKP 197
H+ YC P
Sbjct: 276 GHIGHL--------SRYCTAP 288
>gi|321478594|gb|EFX89551.1| hypothetical protein DAPPUDRAFT_95131 [Daphnia pulex]
Length = 626
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCA-KKFCNYCKKPGHI 200
+GR MR +C+ C + HI C ++ C+YCK+PGH+
Sbjct: 365 RGRQMRD-ECYKCYQQGHIARDCPNERVCSYCKEPGHV 401
>gi|37728011|gb|AAR02376.1| gag protein [Simian immunodeficiency virus]
Length = 510
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 170 QVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQ 209
Q +CF+C ++ H+ C ++ C C +PGH+ K+CP P+
Sbjct: 394 QPKCFNCGKFGHMAKNCKAPQRRKCYNCGQPGHLAKDCPQPPK 436
>gi|27227833|dbj|BAC45014.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 871
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C HI C K+ C C K GH +K+CP R N
Sbjct: 383 RIVKCFNCGREGHIAKNCKAPRKRGCWKCGKEGHQMKDCPERQAN 427
>gi|407038564|gb|EKE39189.1| zinc knuckle domain containing protein [Entamoeba nuttalli P19]
Length = 400
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 157 AAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAK---KFCNYCKKPGHIIKECP 205
+A S + +++V CF C + HI C++ K C YC KPGHI K CP
Sbjct: 297 SAPETSSLNKSLQKV-CFKCGKPGHIGRDCSQPDDKVCFYCGKPGHIGKNCP 347
>gi|253326816|gb|ACT31322.1| gag polyprotein [Equine infectious anemia virus]
Length = 486
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LADVQEVHEQSKRDQFLMK-L 104
G QN G + ++E+VD + Q+ E L D + ++ + M+ L
Sbjct: 270 GKPRAQNIRQGPKEPYSEFVDRLLSQIKSEGHSTEITKFLTDTLTIQNANEECKTAMRHL 329
Query: 105 RPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK 164
RP+ RD+ +R++ L + + + +A K
Sbjct: 330 RPEDTLEDKLYACRDIG---------TVRQKMMLLAKAL-------QSGLAGPMKGGIIK 373
Query: 165 GRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQAS 214
G ++ Q C++C + H+ +C A K C CK+PGH K+C P+N +
Sbjct: 374 GGPLKARQTCYNCGKXGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKNGRPG 425
>gi|147839951|emb|CAN70454.1| hypothetical protein VITISV_035057 [Vitis vinifera]
Length = 291
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 44 LEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMI--YVQVPIESLADVQEVHEQSKRDQFL 101
L ++ QG ++ YF+ + +W + +D+ Y E ++ E ++ +FL
Sbjct: 95 LTLKLGEIRQGEDNVTKYFNSLKRIWQD-LDLFKTYEWKSTEDGLHHKKTMEDNQIFKFL 153
Query: 102 MKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHW 161
L ++ R ++ R PS+ F E+ REE R + ++ K +A
Sbjct: 154 AGLNVDFDEVRGRIIGRQPLPSIGEVFSEVRREESR---RNVMLGKK--GPGVAIEGLTL 208
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+ G +V F K + +C++C KP + + C
Sbjct: 209 VTTGGGYNKVVAFQRKSDER-----PRVWCDFCNKPRYTRENC 246
>gi|253987314|gb|ACT52162.1| gag protein [Equine infectious anemia virus]
Length = 489
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH+ ++C P+N
Sbjct: 373 KGGPLKTPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHMSRQCKNAPKN 421
>gi|14579613|gb|AAK69330.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 383 RIVKCFNCGKTGHIAKNCKAPRKKGCWKCGKEGHQMKDCPERQAN 427
>gi|114689169|ref|XP_529043.2| PREDICTED: zinc finger CCHC domain-containing protein 13 [Pan
troglodytes]
gi|397507945|ref|XP_003824438.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like [Pan
paniscus]
Length = 170
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+K C C K GH+ KECP+
Sbjct: 123 KDCAQVKCYRCGEIGHVAINCSKTRPGQCYRCGKSGHLAKECPS 166
>gi|147785770|emb|CAN77632.1| hypothetical protein VITISV_041497 [Vitis vinifera]
Length = 521
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCCKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L +++ ++ + + + +Q++ D+F M LRP E R ++
Sbjct: 137 SLKEQFLTVMPLTPDVGA--------QQTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 188
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSL LLR +TQT+ + + Q S
Sbjct: 189 PSLGDVLARLLRIS---STQTLPSDSVSDSSV---------------LVSQTTSRGGRSG 230
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 231 TRGRGQRPHCTYCNKLGHTRDRC 253
>gi|147782683|emb|CAN75028.1| hypothetical protein VITISV_026823 [Vitis vinifera]
Length = 2182
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W++ ++++ + N + TAK++W+ + ++Y+ N ++ LE ++ Q + +
Sbjct: 1870 MAWLVNAMEEDISANYMCYSTAKELWDNINQMYSDFGNQSQVYELEMKLGEIRQEDNIVT 1929
Query: 60 NYFSGFQNLWAE 71
YF+ + LW +
Sbjct: 1930 RYFNTLKGLWQD 1941
>gi|414152012|gb|AFW99170.1| gag polyprotein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|166236165|gb|ABY85872.1| gag protein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|414152005|gb|AFW99164.1| gag polyprotein [Equine infectious anemia virus]
gi|414152019|gb|AFW99176.1| gag polyprotein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|300244839|gb|ADJ93852.1| gag polyprotein [Equine infectious anemia virus]
Length = 426
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 373 KGGSLKAPQICYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 421
>gi|270007992|gb|EFA04440.1| hypothetical protein TcasGA2_TC014742 [Tribolium castaneum]
Length = 192
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 168 MRQVQCFSCKEY-RHIVVKCA----KKFCNYCKKPGHIIKECPTR 207
R+++C++C E+ HI KC K C+ CK H+I +CPTR
Sbjct: 120 FRKIRCYNCGEFANHIAAKCTMGPQPKRCHNCKSEDHLIADCPTR 164
>gi|414152026|gb|AFW99182.1| gag polyprotein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGPLKASQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|396077172|dbj|BAM33598.1| Gag-Pol precursor polyprotein [Felis catus]
Length = 558
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 185 KCAKKFCNYCKKPGHIIKECPTRPQNCQASQAVVA 219
K K C YCK+ GH IK+CP RP N + +V+A
Sbjct: 518 KVGKDQCAYCKERGHWIKDCPKRPGNSKKPASVLA 552
>gi|259127118|gb|ACV94428.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCGAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|223951331|gb|ACN29611.1| gag protein [Human immunodeficiency virus 1]
Length = 511
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+ GRD R+ V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 380 RGNGRDQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 429
>gi|146400053|gb|ABQ28724.1| gag protein [Equine infectious anemia virus]
Length = 488
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 28/175 (16%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LADVQEVHEQSKRDQFLMK-L 104
G QN G + ++E++D + Q+ E L D + ++ + M+ L
Sbjct: 270 GKPKAQNIRQGPKEPYSEFIDRLLSQIKSEGHPSEITKFLTDTLTIQNANEECRNAMRHL 329
Query: 105 RPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSK 164
RP+ RD+ + Q +L + + +A K
Sbjct: 330 RPEDTLEEKMYACRDIGST----------------KQKMLLLARALQSGLAGPMKGGILK 373
Query: 165 GRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
G ++ Q C++C + H+ +C A K C C++PGH K+C P+N Q +Q
Sbjct: 374 GGPLKAAQTCYNCGKPGHLSSQCRAPKVCFKCRQPGHFSKQCRNAPKNGKQGAQG 428
>gi|147852307|emb|CAN80124.1| hypothetical protein VITISV_021273 [Vitis vinifera]
Length = 206
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S+D LI N TAK +W+ + Y + +T++ L + + Q S++ Y
Sbjct: 39 WLINSMDPXLIGNFIRFPTAKLVWDSIATTYFDGSDTSQVYDLRRXVTQLKQXXGSLEKY 98
Query: 62 FSGFQNLWAEYVDMIYVQVP--IESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLM 116
++ Q LW E I + P +E D+ + + D+ FL L + + R +++
Sbjct: 99 YNDLQGLWRE----IDFRRPNXMEXAVDIHNYNLLLQEDRVYVFLDGLDDRLDKIRGDVL 154
Query: 117 NRDLSPSLDVCFKELLREEQR 137
P+++ + + RE R
Sbjct: 155 QLRPFPTVEQAYAHVRREALR 175
>gi|402082586|gb|EJT77604.1| hypothetical protein GGTG_02710 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 521
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 167 DMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
D +QC SC E H+ C K C CK+PGH EC
Sbjct: 121 DRPPMQCRSCGEDGHMSKDCPSKTCPNCKEPGHTAAEC 158
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 172 QCFSCKEYRHIVVKCAK-----KFCNYCKKPGHIIKECPTRP 208
+CF+C E H C K C C K GHI ++CP RP
Sbjct: 82 KCFNCGEAGHNKADCTKPRVFDGTCRVCNKEGHIGRDCPDRP 123
>gi|166236167|gb|ABY85873.1| gag protein [Equine infectious anemia virus]
Length = 487
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 373 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 428
>gi|154270790|ref|XP_001536249.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409823|gb|EDN05263.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1307
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|300244841|gb|ADJ93853.1| gag polyprotein [Equine infectious anemia virus]
Length = 426
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 373 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 421
>gi|154270260|ref|XP_001535986.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410057|gb|EDN05445.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 987
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|147844355|emb|CAN80020.1| hypothetical protein VITISV_004053 [Vitis vinifera]
Length = 283
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W++ ++D + N + TA ++W K+ Y B DNTA ++ QG + +
Sbjct: 86 MSWLINAMDTEIGQNFLFYDTAHEIWMAAKETYSBSDNTADLLDIKGAPHDLRQGEMIVT 145
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADV---QEVHEQSKRDQFLMKLRPKYEAARSNLM 116
+Y++ W + +D ++ + E D + + E+ + +FL+ L + R ++
Sbjct: 146 HYYNTLSRFWQQ-LD-VFETMDWECXXDASRYKXIIEKERVFKFLLGLDKSLDEVRGRIL 203
Query: 117 NRDLSPSLDVCFKELLREE 135
P++ F R+E
Sbjct: 204 GTKPLPTIREAFFRGRRKE 222
>gi|147820669|emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera]
Length = 2655
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 188 KKFCNYCKKPGHIIKECPTRPQNCQA 213
KKFCNYCK+PGH I+ C R ++ A
Sbjct: 1491 KKFCNYCKRPGHTIETCYRRNKSTTA 1516
>gi|147780150|emb|CAN60059.1| hypothetical protein VITISV_039055 [Vitis vinifera]
Length = 244
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 88 VQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQN 147
++++ EQ + +FL+ L P+ + R ++ ++ PS+ + ++ EE R + ++
Sbjct: 10 LKKIMEQERVFEFLVGLNPELDQVRVQILGKEPFPSIREVYAYVIGEESR---RVVMLGG 66
Query: 148 KMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
+N+ A ++KS G +V+ + + + +CNYC KP H + C
Sbjct: 67 YTPENSALATAGNFKSMGS---KVEGRTPDDKDSL-------WCNYCHKPRHTRESC 113
>gi|374430076|gb|AEZ51335.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 485
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 376 RMVKCFNCGRDGHIAKNCRAPRKKGCWKCGKEGHQLKDCPERQAN 420
>gi|166026108|gb|ABY78364.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
G R+V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 GNQRRKVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|441674301|ref|XP_004092503.1| PREDICTED: zinc finger CCHC domain-containing protein 13 [Nomascus
leucogenys]
Length = 170
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+K C C K GH+ KECP+
Sbjct: 123 KDCAQVKCYRCGEIGHVSINCSKASEVTCYRCGKSGHLAKECPS 166
>gi|154301789|ref|XP_001551306.1| hypothetical protein BC1G_10046 [Botryotinia fuckeliana B05.10]
Length = 533
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 170 QVQCFSCKEYRHIVVKCA----KKF-CNYCKKPGHIIKECP 205
QVQCF+C E H V C KF C CKK GH KECP
Sbjct: 273 QVQCFNCGEIGHRVRDCPIPREDKFACRNCKKSGHSSKECP 313
>gi|154271554|ref|XP_001536630.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409300|gb|EDN04750.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1163
Score = 40.4 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|380479690|emb|CCF42868.1| hypothetical protein CH063_12746 [Colletotrichum higginsianum]
Length = 474
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTR-----PQNCQA 213
R R QCF C Y HI +C A C YC + H +ECP++ P+ C A
Sbjct: 356 RQCRLRQCFRCHAYGHIGTQCKATTTCGYCAQE-HATRECPSKSDTATPRKCAA 408
>gi|147858105|emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 30 KKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQ 89
+ V+ Q N ++ ++ +I + QG SI Y++ + W E Y +V S ++
Sbjct: 152 ENVFRQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSS--YHEVLSCSCGGLE 209
Query: 90 EVHEQSKRD---QFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQ 146
++ E+ +++ QFLM L Y A R ++ P + +L++E+++ ++
Sbjct: 210 KLKERDEKERVMQFLMGLNDSYAAIRGQILLMHPLPDTRRVYSLVLQQEKQVEV-SLNNG 268
Query: 147 NKMHDNAIAYAA-AHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
NK H YA A +K QVQ K H C+YC + H I++C
Sbjct: 269 NKNH-----YAMLADRDNKATSAHQVQ--KQKTPLH---------CSYCDRDYHSIEKC 311
>gi|2865437|gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 40.4 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
++G+I S+ L T+ ++WE L + + A L ++ ++++G S+ YF
Sbjct: 95 LLGAISLSVQPLLSKANTSAEVWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSVVTYFQ 154
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPK-YEAARSNLMNRDLSP 122
GF + + LA + + E+ ++ + ++ P+ Y+ + +R+ P
Sbjct: 155 GFTTRF-------------DHLALLGKAPEREEQIELILGGLPEDYKTVVDQIESRENPP 201
Query: 123 SLDVCFKELLREEQRLATQ 141
+L ++L+ E +LA +
Sbjct: 202 ALTEVLEKLINHEVKLAAK 220
>gi|154273216|ref|XP_001537460.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415972|gb|EDN11316.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1306
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|147792391|emb|CAN70277.1| hypothetical protein VITISV_022230 [Vitis vinifera]
Length = 1166
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D + +L+ +KT W K +Y D + + +I Q ++ + Y
Sbjct: 78 SVDPKIFHHLRAYKTCFKFWTQTKGLYTND-IQRFYKVVXDIVHVRQQDMBLSTYIGRIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P + + Q++ D+F M L P E+ R ++
Sbjct: 137 SLKEEFLTLM----PFTNGXEAQQI----XTDKFFMVLTLIGLXPDLESVRDQILASPSV 188
Query: 122 PSLDVCFKELLREEQRLATQTI 143
PSLB F LLR +TQT+
Sbjct: 189 PSLBDVFAXLLRLS---STQTL 207
>gi|154277106|ref|XP_001539398.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414471|gb|EDN09836.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1315
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|300720099|gb|ADK33038.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +KECP R N
Sbjct: 384 RIVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKECPGRQAN 428
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECP 205
+D Q++C+ C E H+ V C+K C C +PGH+ +ECP
Sbjct: 123 KDCTQIKCYRCGENGHMAVNCSKASEVSCYRCGEPGHLARECP 165
>gi|154277386|ref|XP_001539534.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413119|gb|EDN08502.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1390
Score = 40.4 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|37682802|gb|AAQ98385.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 499
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
+ ++++CF+C + RH+ C KK C C K GH +K+C RP
Sbjct: 381 KGQKRIKCFNCGKDRHLARNCRAPRKKGCWRCGKEGHQMKDCTERP 426
>gi|5059041|gb|AAD38881.1|AF119819_1 gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 387 RSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 431
>gi|402694379|gb|AFQ90123.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 488
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQAS 214
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N +
Sbjct: 374 KGGPLKAKQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKNGRTG 426
>gi|154284902|ref|XP_001543246.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406887|gb|EDN02428.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1390
Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 292 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 341
>gi|903629|gb|AAB38028.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 499
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 RNQRKIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|393229305|gb|EJD36930.1| hypothetical protein AURDEDRAFT_116973 [Auricularia delicata
TFB-10046 SS5]
Length = 207
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 171 VQCFSCKEYRHIVVKCAKK----FCNYCKKPGHIIKECP 205
QC+ C + H+ +C +K C+ C+KPGH+ +CP
Sbjct: 105 AQCYHCGDLGHLFYECPRKNKAPACHRCRKPGHVATQCP 143
>gi|147800238|emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]
Length = 1082
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQD-NTAKRSHLEYEIARYSQGNLSIQN 60
TW++ S++ + ++ L TAK MW+ +K++++ D N ++ L ++ +G S+
Sbjct: 69 TWMLNSLEPEIAASVGLTSTAKKMWDDIKEMFSNDGNNSRIFSLFQQLVDNKEGERSLPE 128
Query: 61 YFSGFQNLWAEYVDMIYVQVPIES 84
+F+ ++ + E +++ + ++S
Sbjct: 129 FFAAYRGIINELRELLPLSTDLDS 152
>gi|121945885|dbj|BAF44661.1| RNA helicase [Neobenedenia girellae]
Length = 634
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 165 GRDMRQVQ----CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECPTRPQ--NCQA 213
GRD V C C+E H+ +C KK C C + GH ECP P+ NC+A
Sbjct: 21 GRDCPTVGDDRACNFCQETGHLAKECPKKPCRNCGELGHHRDECPAPPKCGNCRA 75
>gi|26522546|dbj|BAC02525.2| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 854
Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 384 RIVKCFNCGKEGHIARKCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|82571406|gb|ABB84163.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +KECP R N
Sbjct: 384 RIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKECPGRQAN 428
>gi|408396967|gb|EKJ76118.1| hypothetical protein FPSE_03593 [Fusarium pseudograminearum CS3096]
Length = 1380
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 172 QCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECP 205
+CF+C EY H+ C ++ C++C H+ K+CP
Sbjct: 1200 KCFNCGEYGHMKSNCPERQCHFCGDKDHLKKDCP 1233
>gi|254667217|gb|ACT76567.1| gag protein [Human immunodeficiency virus 1]
Length = 166
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+D ++++CF+C H+ C KK C C K GH +K+CP R
Sbjct: 51 KDQKRIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKDCPER 95
>gi|213138374|gb|ACJ44847.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +KECP R N
Sbjct: 382 RIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKECPGRQAN 426
>gi|147861661|emb|CAN83177.1| hypothetical protein VITISV_042114 [Vitis vinifera]
Length = 1085
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 46/202 (22%)
Query: 8 IDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQN 67
+D ++L+L +KT W +K ++ D + + I Q ++ + Y +
Sbjct: 63 VDPKILLHLWAYKTCFKFWNQIKGLHTND-IQRLYKVASSIVNVRQQDMDLSTYIGQIAS 121
Query: 68 LWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLSP 122
L E++ + D+F M LRP E R ++ P
Sbjct: 122 LKEEFLTI----------------------DKFFMVLTLIGLRPDLETVRDQILGSSSVP 159
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHI 182
SLD F LLR +TQT+ N D+++ + Q S
Sbjct: 160 SLDDVFARLLRIS---STQTLPSDNT-SDSSVLVS--------------QTSSRGGRSGN 201
Query: 183 VVKCAKKFCNYCKKPGHIIKEC 204
+ + +C YC K GH C
Sbjct: 202 RGRGQRPYCTYCNKLGHTRDRC 223
>gi|154281441|ref|XP_001541533.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411712|gb|EDN07100.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1329
Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKECPTRPQNCQAS 214
R+ + +CF+C EY H C + K C +C H KECP R Q S
Sbjct: 289 REAQVTRCFNCHEYGHTARFCRQAKRCGFCAAKEHDDKECPARKAGEQPS 338
>gi|395754126|ref|XP_003779713.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Pongo abelii]
Length = 170
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+K C C K GH+ +ECP+
Sbjct: 123 KDCAQVKCYRCGEIGHVAINCSKASQVNCYRCGKSGHLARECPS 166
>gi|347828477|emb|CCD44174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 170 QVQCFSCKEYRHIVVKCA----KKF-CNYCKKPGHIIKECP 205
QVQCF+C E H V C KF C CKK GH KECP
Sbjct: 314 QVQCFNCSEIGHRVRDCPIPREDKFACRNCKKSGHSSKECP 354
>gi|147820734|emb|CAN74132.1| hypothetical protein VITISV_015703 [Vitis vinifera]
Length = 254
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 30/192 (15%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
++W++ S++ + TAK +W+ + + Y + +N+A+ + +I Q
Sbjct: 78 ISWLINSMESEIGQTYMFLPTAKQVWDVVVETYSDMENSAQVFEITNKIQELKQE----- 132
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQ---FLMKLRPKYEAARSNLM 116
+DM Y + + D + +RDQ FL L + + ++
Sbjct: 133 -------------LDMFY-NLEWTCVTDSTRYMKMLERDQVFTFLAGLNKELDEVHGCIL 178
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSC 176
+D PS+ F E+ REE R +Q M + AA + K D +V C C
Sbjct: 179 WKDPLPSVQAVFSEVCREESR-------RQVMMETLTLPNAARRNQEKEDDKGKVWCDFC 231
Query: 177 KEYRHIVVKCAK 188
+ RH C K
Sbjct: 232 NKPRHTRETCWK 243
>gi|386306768|gb|AFJ05366.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 505
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + RHI C KK C C K GH +K+C R N
Sbjct: 388 RMVKCFNCGKERHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|146400057|gb|ABQ28726.1| gag protein [Equine infectious anemia virus]
Length = 488
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
+G ++ Q C++C + H+ +C A K C C++PGH K+C P+N Q +Q
Sbjct: 373 RGGPLKAAQTCYNCGKPGHLSSQCRAPKVCFKCRQPGHFSKQCKNAPKNGKQGAQG 428
>gi|166025562|gb|ABY78091.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ GRD R+ V+CF+C + HI C KK C C + GH +K+C R N
Sbjct: 378 RGNGRDQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGREGHQMKDCTERQAN 430
>gi|147817219|emb|CAN75362.1| hypothetical protein VITISV_033265 [Vitis vinifera]
Length = 710
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 2 TWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQ-N 60
TW++ S++ + ++ L TAK+MW+ +K++++ D RS +++ + Q + +
Sbjct: 65 TWMLNSLEPEIAASVGLTSTAKEMWDAIKEMFSNDGNNSRSFSLFQLVDHKQERAKVVID 124
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEV 91
Y S N ++D V++ + SL + +V
Sbjct: 125 YVSFVVNEGTPWID---VRISMVSLIGLPKV 152
>gi|45360169|gb|AAS59204.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C HI C KK C C + GH +K+CP R N
Sbjct: 383 RTVKCFNCGREGHIARNCRAPRKKGCWKCGREGHQMKDCPERQAN 427
>gi|328834587|gb|AEB52980.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 500
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQNC 211
R V+CF+C + HI C KK C C K GH +K+C R NC
Sbjct: 388 RIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANC 433
>gi|46486646|gb|AAS98751.1| gag protein [Human immunodeficiency virus 1]
gi|213137185|gb|ACJ44277.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIARNCGAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|259126519|gb|ACV94230.1| gag protein [Human immunodeficiency virus 1]
gi|259126550|gb|ACV94245.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 157 AAAHWKSKG--RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
AAA +G R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 373 AAAVMMQRGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|166025716|gb|ABY78168.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNY 193
R+ + + Q + ++AI ++++ G+ ++CF+C + H+ C KK C
Sbjct: 361 RVLAEAMSQATNLTNSAIMMQRGNFRNPGKS---IKCFNCGKIGHLARNCKAPRKKGCWK 417
Query: 194 CKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 418 CGKEGHQMKDCTERQAN 434
>gi|383506255|gb|AFH37786.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 391 KPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQAN 435
>gi|300811076|gb|ADK35810.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|147769672|emb|CAN73953.1| hypothetical protein VITISV_025588 [Vitis vinifera]
Length = 715
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
MTW++ S+++ + N T +++WE ++Y+ N ++ L ++ QG
Sbjct: 29 MTWLVNSMEEDISSNYMYCPTTQELWENANQMYSDLGNQSQIFELTLKLGEIRQGE---- 84
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD----QFLMKLRPKYEAARSNL 115
+ D++ A+ H+++ D +FL L +++ R +
Sbjct: 85 -----------DNQDLVLFNTYEWKSAEDGRHHKKTMEDNRIFKFLAGLNVEFDEVRGRI 133
Query: 116 MNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFS 175
+ R PS+ F E+ REE R + ++ K+ AI A + G +V F
Sbjct: 134 IRRQPLPSIGEVFSEVRREESR---RNVMLGKKVPGVAIEGLAL--VTXGGGYNKVVAFQ 188
Query: 176 CKEYRHIVVKC 186
CK V C
Sbjct: 189 CKSDERPRVWC 199
>gi|410988851|ref|XP_004000690.1| PREDICTED: cellular nucleic acid-binding protein-like [Felis catus]
Length = 171
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
Y+ + +D QV+C+ C E H+ + C+K C C + GH+ +ECPT
Sbjct: 113 CYSCGEYGHIQKDCTQVKCYRCGEIGHMAINCSKTSEVNCYRCGESGHLARECPT 167
>gi|320410218|gb|ADW26889.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 391 KPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQAN 435
>gi|320410215|gb|ADW26888.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 391 KPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQAN 435
>gi|300811055|gb|ADK35792.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|259126521|gb|ACV94231.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 384 RGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|259126547|gb|ACV94244.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 157 AAAHWKSKG--RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
AAA +G R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 373 AAAVMMQRGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|242028613|gb|ACS76337.1| gag protein [Human immunodeficiency virus 1]
Length = 451
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C +KK C C K GH++K+C R N
Sbjct: 367 RTVKCFNCGKEGHIARNCRAPSKKGCWKCGKEGHLMKDCNERQAN 411
>gi|225581270|gb|ACN94804.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K GR+ R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 KGNGRNQRKGVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|170778680|gb|ACB36740.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K GR+ R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 KGNGRNQRKGVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|342867783|gb|EGU72563.1| hypothetical protein FOXB_16927 [Fusarium oxysporum Fo5176]
Length = 1790
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 107 KYEAARSNLM--NRDLSPSLDVCFKELLREE--QRLATQTILQQNKMHD-NAIAYAAAHW 161
++E R N++ NR P+ + + L + A+ I++ K D N I W
Sbjct: 293 RFEDMRDNILQENRPFIPNAGIKYIGWLTRTFATKSASSVIIEFTKPQDANKIIDEGLIW 352
Query: 162 KSK-------GRDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
+ + R R QCFSC+ Y HI +C A C YC + H +EC
Sbjct: 353 QGEVFQCELYDRSCRLRQCFSCQRYGHIGTQCKATTRCGYCAQE-HASREC 402
>gi|300811082|gb|ADK35815.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|300811062|gb|ADK35798.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGRQGAQG 430
>gi|87042738|gb|ABD16376.1| gag protein [Feline immunodeficiency virus]
Length = 411
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C A K CN C KPGH+ C
Sbjct: 377 CFNCKKPGHLARQCKAAKKCNNCGKPGHLAVNC 409
>gi|410585676|gb|AFV74119.1| gag protein [Human immunodeficiency virus]
Length = 497
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 137 RLATQTILQQNK-MHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCN 192
R+ + + Q NK + +NAI ++K R V+CF+C + HI C KK C
Sbjct: 358 RVLAEAMSQTNKDLVNNAIMMQRGNFKGP---KRIVKCFNCGKEGHIARNCRAPRKKGCW 414
Query: 193 YCKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 415 KCGKEGHQMKDCTERQAN 432
>gi|300811110|gb|ADK35839.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|93003028|tpd|FAA00097.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 399
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 173 CFSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC---PTRPQNCQA 213
C CKE H+ +C FC YCK GHI K C P P+N +A
Sbjct: 200 CRFCKERGHVQTRC---FCTYCKIEGHITKNCRSKPAIPENKKA 240
>gi|192335091|gb|ACF04074.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 150 HDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPT 206
++ A+ +++K +GR V+CF+C + HI C KK C C K GH +K+C
Sbjct: 373 NNTAVMMQKSNFKGQGRT---VKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCDM 429
Query: 207 RPQN 210
R N
Sbjct: 430 RQAN 433
>gi|300811069|gb|ADK35804.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|300811103|gb|ADK35833.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHLSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|288819398|gb|ADC55407.1| gag protein [Human immunodeficiency virus 1]
gi|288819400|gb|ADC55408.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 389 KTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCPERQAN 433
>gi|242028693|gb|ACS76377.1| gag protein [Human immunodeficiency virus 1]
Length = 451
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C +KK C C K GH++K+C R N
Sbjct: 367 RTVKCFNCGKEGHIARNCRAPSKKGCWKCGKEGHLMKDCNERQAN 411
>gi|242028669|gb|ACS76365.1| gag protein [Human immunodeficiency virus 1]
Length = 451
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C +KK C C K GH++K+C R N
Sbjct: 367 RTVKCFNCGKEGHIARNCRAPSKKGCWKCGKEGHLMKDCNERQAN 411
>gi|409684443|gb|AFV34347.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+D ++++CF+C H+ C KK C C K GH++K+C R N
Sbjct: 383 KDQKRIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHLMKDCTERQAN 430
>gi|288819402|gb|ADC55409.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 389 KTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCPERQAN 433
>gi|242028699|gb|ACS76380.1| gag protein [Human immunodeficiency virus 1]
Length = 451
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C +KK C C K GH++K+C R N
Sbjct: 367 RTVKCFNCGKEGHIARNCRAPSKKGCWKCGKEGHLMKDCNERQAN 411
>gi|259126535|gb|ACV94238.1| gag protein [Human immunodeficiency virus 1]
gi|259126543|gb|ACV94242.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 384 RGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|259126539|gb|ACV94240.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 157 AAAHWKSKG--RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
AAA +G R R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 373 AAAVMMQRGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|82568608|dbj|BAE48553.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 873
Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH++K+C R N
Sbjct: 384 RIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHLLKDCAERHAN 428
>gi|259126545|gb|ACV94243.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 RGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|55275176|gb|AAV49396.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + RHI C KK C C+K GH +K+C R N
Sbjct: 388 KPVKCFNCSKERHIAKNCRAPRKKGCWKCRKEGHQMKDCTKRQAN 432
>gi|414152134|gb|AFW99247.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152137|gb|AFW99249.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152140|gb|AFW99251.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152143|gb|AFW99253.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152146|gb|AFW99255.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152155|gb|AFW99261.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152161|gb|AFW99265.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152167|gb|AFW99269.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQ 209
+ +A + KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+
Sbjct: 75 SGLAGSMKGGICKGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPK 134
Query: 210 N 210
N
Sbjct: 135 N 135
>gi|358365333|dbj|GAA81955.1| zinc knuckle transcription factor [Aspergillus kawachii IFO 4308]
Length = 489
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKF------CNYCKKPGHIIKECPT 206
K RD+ V C +C E H C KK CN C + GH IK CPT
Sbjct: 384 KPRDVSTVTCRNCDEVGHFSRDCPKKRDYSRVKCNNCGEMGHTIKRCPT 432
>gi|225056187|gb|ACN80898.1| gag protein [Human immunodeficiency virus 1]
Length = 507
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
+S RD R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 388 RSNFRDQRKIVKCFNCGKVGHIAKNCKAPGKKGCWKCGKEGHQMKDCTERQAN 440
>gi|242027693|gb|ACS75882.1| gag protein [Human immunodeficiency virus 1]
Length = 453
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++CF+C + HI C K+ C C K GH +KECP R N
Sbjct: 367 RIIKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKECPERQAN 411
>gi|414152164|gb|AFW99267.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQ 209
+ +A + KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+
Sbjct: 75 SGLAGSMKGGICKGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPK 134
Query: 210 N 210
N
Sbjct: 135 N 135
>gi|326417127|gb|ADZ73405.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C + GH +K+CP R N
Sbjct: 383 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCPGRQAN 430
>gi|315272272|gb|ADU02719.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKLCFRCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|36365491|gb|AAQ86700.1| gag protein [Human immunodeficiency virus 1]
gi|36365518|gb|AAQ86724.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K K R+ R+ V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 384 KGKFRNQRKIVKCFNCGKEGHIARKCRAPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|323778|gb|AAA43013.1| polyprotein, partial [Equine infectious anemia virus]
Length = 122
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C + P+N
Sbjct: 34 KGGPLKAAQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCKSVPKN 82
>gi|414152158|gb|AFW99263.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQ 209
+ +A + KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+
Sbjct: 75 SGLAGSMKGGICKGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPK 134
Query: 210 N 210
N
Sbjct: 135 N 135
>gi|9626702|ref|NP_040972.1| gag protein [Feline immunodeficiency virus]
gi|323934|gb|AAB59936.1| gag protein [Feline immunodeficiency virus]
Length = 450
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C + K CN C KPGH+ +C
Sbjct: 377 CFNCKKPGHLARQCREVKKCNKCGKPGHVAAKC 409
>gi|145229969|ref|XP_001389293.1| zinc knuckle transcription factor (CnjB) [Aspergillus niger CBS
513.88]
gi|134055407|emb|CAK37116.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKF------CNYCKKPGHIIKECPT 206
K RD+ V C +C E H C KK CN C + GH IK CPT
Sbjct: 384 KPRDVSTVTCRNCDEVGHFSRDCPKKRDYSRVKCNNCGEMGHTIKRCPT 432
>gi|300811089|gb|ADK35821.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKLCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|259128559|gb|ACV94990.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++++CF+C + H+ C KK C C K GH +K+C RP N
Sbjct: 383 KGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERPAN 430
>gi|227057835|gb|ACP18899.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+G+ R+++CF+C + HI C +K C C K GH +K+C R N
Sbjct: 383 RGQGRRRIKCFNCGKEGHIARNCKAPRRKGCWKCGKEGHQMKDCTERQAN 432
>gi|300811096|gb|ADK35827.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKLCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|315272202|gb|ADU02659.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKLCFRCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|259127100|gb|ACV94421.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|154997046|gb|ABS89203.1| gag protein [Human immunodeficiency virus 1]
Length = 505
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQV-QCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
KS R+ R++ +CF+C + HI C +K C C K GH +K+CP R N
Sbjct: 385 KSNFRNQRKIIKCFNCGKEGHIAKNCRAPRRKGCWKCGKEGHQMKDCPERQAN 437
>gi|147811049|emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 34/198 (17%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 78 SVDPRILLHLQAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHLSQQDLDLSTYIGQIA 136
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDV 126
+L +++ ++ P+ Q Q++ D+F M +R + + S PSLD
Sbjct: 137 SLKEQFLTVM----PLTPDVGAQ----QTQLDKFFMPIRDQILGSSS-------VPSLDD 181
Query: 127 CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC 186
F LLR L++ L D+++ + S +
Sbjct: 182 VFARLLR----LSSTQTLPSASASDSSVLVS--------------HTTSRGGRSGTRGRG 223
Query: 187 AKKFCNYCKKPGHIIKEC 204
+ C YC K GH C
Sbjct: 224 QRPHCTYCNKLGHTRDRC 241
>gi|255069211|dbj|BAH89145.1| Gag [Human immunodeficiency virus 1]
Length = 493
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 377 KSNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|255069201|dbj|BAH89136.1| Gag [Human immunodeficiency virus 1]
gi|255069221|dbj|BAH89154.1| Gag [Human immunodeficiency virus 1]
Length = 493
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 377 KSNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|414152173|gb|AFW99273.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 87 KGGPLKASQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 135
>gi|409684305|gb|AFV34223.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
RD ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 RDQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|147819089|emb|CAN69819.1| hypothetical protein VITISV_025708 [Vitis vinifera]
Length = 1626
Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 76/203 (37%), Gaps = 32/203 (15%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D + + I SQ +L + Y
Sbjct: 526 SVDPRILLHLRAYKTCFKFWTQAKGLYTND-IQRLYKVASAIVHISQQDLDLSTYIGQIA 584
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E + ++ P+ Q Q++ D+F M LRP E R ++
Sbjct: 585 SLKEEXLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRPDLEPIRDQILGSSSV 636
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
SLD F LL +++ L + D+++ + Q S
Sbjct: 637 SSLDDVFARLLC----ISSTQTLPSDSTSDSSVLVS--------------QTTSRGGRSG 678
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 679 TRGRGQRPHCTYCNKLGHTRDXC 701
>gi|46254414|gb|AAS86172.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 159 AHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
++KS+GR V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 378 GNFKSQGRT---VKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 429
>gi|429249270|gb|AFZ77679.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 383 RIVKCFNCGRDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 427
>gi|71794586|emb|CAI28827.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 1430
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R ++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 RGQRTIKCFNCGKEGHIAKSCRAPRKKGCWKCGKEGHQLKDCTERQAN 427
>gi|299930119|gb|ADJ58267.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 383 KGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 430
>gi|261872048|gb|ACY02858.1| gag polyprotein [Equine infectious anemia virus]
Length = 426
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKN 421
>gi|414152149|gb|AFW99257.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQ 209
+ +A + KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+
Sbjct: 75 SGLAGSMKGGICKGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPK 134
Query: 210 N 210
N
Sbjct: 135 N 135
>gi|3193273|gb|AAD03326.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1433
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 385 RNQRKIKCFNCGKEGHISKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|21671035|dbj|BAC02527.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 872
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNY 193
R+ + + Q N NAI +++K R V+CF+C + HI C KK C
Sbjct: 358 RVLAEAMSQTN----NAILMQRSNFKGS---KRIVKCFNCGKEGHIARNCRAPRKKGCWK 410
Query: 194 CKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 411 CGKEGHQLKDCTERQAN 427
>gi|402694375|gb|AFQ90121.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 471
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H+ +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCRNAPKNGKQGAQG 428
>gi|354492644|ref|XP_003508457.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 172
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 27/150 (18%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
GFQ +++ D+ Y + LA +D L + Y R L+ +D
Sbjct: 35 GFQFVFSSLPDICYNCGESDHLA----------KDCDLQEGDACYNCGRGGLIAKDC--- 81
Query: 124 LDVCFKELLREEQRLATQTILQQNKMH------DNAIAYAAAHWKSKGRDMRQVQCFSCK 177
KE RE ++ + + D Y+ + + +D V+C+ C
Sbjct: 82 -----KEPKREREQCCCYNFGKPGHLARDCDHADEQKCYSCSEFGHIQKDCTSVKCYRCG 136
Query: 178 EYRHIVVKCAKKF---CNYCKKPGHIIKEC 204
E H+ C+K C C + GH+ +EC
Sbjct: 137 EPGHVATNCSKTSEVNCYRCGESGHLAQEC 166
>gi|315272265|gb|ADU02713.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|300244837|gb|ADJ93851.1| gag polyprotein [Equine infectious anemia virus]
Length = 428
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LAD---VQEVHEQSKRDQFLM 102
G QN G + + ++VD + Q+ E L D +Q +E+ K +
Sbjct: 272 GKPKAQNIKQGPKEPYPDFVDRLLSQIKSEGHSSEITRFLTDTLTIQNANEECK--NAMR 329
Query: 103 KLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWK 162
LRP+ RD+ V K +L + A QT L M N I
Sbjct: 330 HLRPEDTLEEKLYACRDIG---TVKQKMMLLAK---ALQTGLA-GPMRGNVI-------- 374
Query: 163 SKGRDMRQVQ-CFSCKEYRHIVVKCA-KKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C K C CK+PGH K+C P+N
Sbjct: 375 -KGGSLKTPQTCYNCGKPGHLSSQCKLPKVCFKCKQPGHFSKQCKAPPKN 423
>gi|259127116|gb|ACV94427.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259127096|gb|ACV94419.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|166025718|gb|ABY78169.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 388 KAVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 432
>gi|55735950|gb|AAV59683.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RDQRKTVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|320128476|gb|ADW19542.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 378 RIVKCFNCGRDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 422
>gi|259127085|gb|ACV94416.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|264687827|gb|ACY73904.1| gag protein [Small ruminant lentivirus]
Length = 241
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
+ KGRD + C++C + H+ +C + K C C + GH+ KEC
Sbjct: 195 RPKGRDAKDQACYNCGKPGHLARQCRSGKTCYKCGRKGHVQKEC 238
>gi|255986832|gb|ACU50798.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 150 HDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPT 206
H NAI +++++ ++ V+CF+C + HI C K+ C C K GH +KEC
Sbjct: 372 HSNAIMMQKGNFRNQRKN---VKCFNCGKEGHIARNCRAPRKRGCWKCGKEGHQMKECTE 428
Query: 207 RPQN 210
R N
Sbjct: 429 RQAN 432
>gi|261872046|gb|ACY02857.1| gag polyprotein [Equine infectious anemia virus]
Length = 427
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 31/170 (18%)
Query: 54 GNLSIQNYFSGFQNLWAEYVDMIYVQVPIES--------LAD---VQEVHEQSKRDQFLM 102
G QN G + + E++D + Q+ E L D +Q +E+ K +
Sbjct: 271 GKPKAQNIRQGPKEPYPEFIDRLLSQIKSEGHPTEITKFLTDTLTIQNANEECK--NAMR 328
Query: 103 KLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWK 162
LRP+ RD+ + K+ + R A QT L M AI
Sbjct: 329 HLRPEDTLEEKLYACRDIGTT-----KQKMMLLAR-ALQTGLA-GPMKGGAI-------- 373
Query: 163 SKGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
+G ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 374 -RGGPLKAKQTCYNCGKPGHLSSQCKAPKVCFKCKEPGHFSKQCRNAPKN 422
>gi|259127104|gb|ACV94423.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259127091|gb|ACV94417.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|166026208|gb|ABY78414.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RPVKCFNCGKEGHIAXNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|27901712|gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]
Length = 450
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 50 RYSQGNLSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVH-EQSKRDQFLMKLRPKY 108
R +G S+ YF F+ ++ E + +P VQ+ EQ FL L ++
Sbjct: 40 RPEKGAKSLTAYFMDFKKVYEE----LNALMPFSPDVRVQQAQREQMAVVSFLSGLPSEF 95
Query: 109 EAARSNLMNRDLSPSLDVCFKELLREEQRLATQ---TILQQNKMHDNA--IAYAAAH--W 161
E +S +++ SL F +LR E ++Q ++ + + +NA + + +
Sbjct: 96 ETTKSQILSGSDIGSLQEVFSRVLRTENVSSSQHTNVLVAKGENAENARRVTNRGGNRAF 155
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCAK 188
+++G D + CF C E H C K
Sbjct: 156 ENRGNDSSTIVCFYCYEAGHTKKNCRK 182
>gi|227057911|gb|ACP18923.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 380 KSNFRGQRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|126542363|gb|ABO16613.1| gag protein [Feline immunodeficiency virus]
gi|134284810|gb|ABO69499.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD-LSP 122
G + ++E+VD ++ Q+ ES Q+V + K + P+ + A S+L D L
Sbjct: 282 GPKEPYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANPECKRAMSHLRPEDKLED 339
Query: 123 SLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKS---KGRDMRQVQCFSCKEY 179
+ C ++ A + + +H + K +G+ ++CF+C +
Sbjct: 340 KIRAC-----QDIGSTAYKMNMLAQALHQVRVQQVQVKPKGNPVQGKRRGPLKCFNCGKI 394
Query: 180 RHIVVKC-AKKFCNYCKKPGHIIKEC 204
H+ C A K CN C K GHI +C
Sbjct: 395 GHMAKVCRAPKKCNKCGKTGHISTDC 420
>gi|449529192|ref|XP_004171585.1| PREDICTED: uncharacterized LOC101218972 [Cucumis sativus]
Length = 362
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEY----VDMIYVQVPIESLADVQEVHEQSKRDQFLM 102
+IA + QGNLS++ YF + LW + D ++A E+ E+ K QF +
Sbjct: 226 KIASHRQGNLSVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFI 285
Query: 103 KLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQR 137
L Y S ++ P+++ + E++REE+R
Sbjct: 286 GLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKR 320
>gi|315272258|gb|ADU02707.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|315272251|gb|ADU02701.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|7594608|emb|CAB53042.2| GAG protein [Human immunodeficiency virus 1]
Length = 499
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTR 207
+A A KS + R+++CF+C + H+ C KK C C K GH +K+C R
Sbjct: 371 SGTVAAAIMMQKSNFKGPRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTER 430
Query: 208 PQN 210
N
Sbjct: 431 QAN 433
>gi|414152170|gb|AFW99271.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152176|gb|AFW99275.1| gag polyprotein, partial [Equine infectious anemia virus]
gi|414152179|gb|AFW99277.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 87 KGGPLKASQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 135
>gi|343168838|gb|AEL96786.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 392 KTVKCFNCGREGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 436
>gi|259127112|gb|ACV94426.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259127110|gb|ACV94425.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|147798886|emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
Length = 1248
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYN-QDNTAKRSHLEYEIARYSQGNLSIQNYF 62
I SID ++ L + K++ +YL+ +Y+ + N ++ + R + S+ YF
Sbjct: 72 IRNSIDSEIVGLLNHCEFVKELMDYLEFLYSGKGNLSRMYDVCKAFYRVEKEAKSLTTYF 131
Query: 63 SGFQNLWAEYVDMIYVQVPIESLADVQEVH-EQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
F+ + E + V +P + VQ+ E+ FL+ L ++E A+S +++
Sbjct: 132 MDFKKTYEE----LNVLLPFSTDIKVQQTQREKMVVMSFLIGLPSEFETAKSQILSSSEI 187
Query: 122 PSLDVCFKELLREEQRLATQTILQQN 147
SL F +LR E T +I Q N
Sbjct: 188 GSLQEVFNRILRTE---GTSSIQQTN 210
>gi|259127107|gb|ACV94424.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259127098|gb|ACV94420.1| gag protein [Human immunodeficiency virus 1]
gi|259127124|gb|ACV94429.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|197690516|emb|CAP69998.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 500
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 389 KPVKCFNCGREGHIAKNCRAPRKKGCWKCGKEGHQMKDCPERQAN 433
>gi|147841873|emb|CAN62654.1| hypothetical protein VITISV_033270 [Vitis vinifera]
Length = 963
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 60/211 (28%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
MTW++ S+++ + N Y +DN AK
Sbjct: 94 MTWLVNSMEEDISSN-----------------YMEDNVAK-------------------- 116
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRD----QFLMKLRPKYEAARSNLM 116
YF+ +W D+ AD H+++ D +FL L +++ R ++
Sbjct: 117 YFNSLNQIWQ---DLDLFNTYEWKSADDGLHHKKTMEDNRIFKFLAGLNVEFDEVRGRII 173
Query: 117 NRDLSPSLDVCFKELLREEQRLATQTILQQNKM---HDNAIAYAAAHWKSKGRDMRQVQC 173
R PS+ F ++ REE Q+N M +A + + G +
Sbjct: 174 GRQPLPSIGEVFSKVRREES--------QRNVMLSKKGPGVAIEGSALVTTGGGYNKAAA 225
Query: 174 FSCKEYRHIVVKCAKKFCNYCKKPGHIIKEC 204
F CK + +C++C KP H + C
Sbjct: 226 FQCKSNER-----PRVWCDFCNKPRHTCENC 251
>gi|449472429|ref|XP_004153591.1| PREDICTED: uncharacterized protein LOC101218972 [Cucumis sativus]
Length = 362
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 47 EIARYSQGNLSIQNYFSGFQNLWAEY----VDMIYVQVPIESLADVQEVHEQSKRDQFLM 102
+IA + QGNLS++ YF + LW + D ++A E+ E+ K QF +
Sbjct: 226 KIASHRQGNLSVERYFKKLKKLWNDIGTYSSDFAQGYSSNGTIAFWSELTERDKVMQFFI 285
Query: 103 KLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQR 137
L Y S ++ P+++ + E++REE+R
Sbjct: 286 GLNDYYSIICSQILVNQPFPTVEEAYSEIIREEKR 320
>gi|259127094|gb|ACV94418.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|255739545|gb|ACU31710.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
RQV+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 386 RQVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|3193281|gb|AAD03334.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 385 RNQRKIKCFNCGKEGHISKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|82294408|sp|Q82851.1|POL_JEMBR RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr170Gag-Pol;
Contains: RecName: Full=Matrix protein p16; Short=MA;
Contains: RecName: Full=Capsid protein p26; Short=CA;
Contains: RecName: Full=Transframe peptide; AltName:
Full=p11; Contains: RecName: Full=Protease; AltName:
Full=P119; AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; Short=RT;
AltName: Full=Exoribonuclease H; AltName: Full=P72;
Contains: RecName: Full=Integrase; Short=IN
gi|733069|gb|AAA64389.1| gag-pol precursor [Jembrana disease virus]
gi|1581037|prf||2116345B gag-pol gene
Length = 1432
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 146 QNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECP 205
+ KM A A+AA + K G R C+ C + HI C + C C KPGH+ + C
Sbjct: 346 KQKMQFLAEAFAAINVKGDGEVQR---CYGCGKPGHIRRDCKNQKCFKCGKPGHLQRNCK 402
Query: 206 TR 207
++
Sbjct: 403 SK 404
>gi|255739543|gb|ACU31709.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
RQV+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 386 RQVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|75651078|sp|Q82850.1|GAG_JEMBR RecName: Full=Gag polyprotein; AltName: Full=Pr53Gag; Contains:
RecName: Full=Matrix protein p16; Short=MA; Contains:
RecName: Full=Capsid protein p26; Short=CA; Contains:
RecName: Full=Nucleocapsid protein p13; Short=NC
gi|733068|gb|AAA64388.1| gag precursor [Jembrana disease virus]
gi|1581036|prf||2116345A gag gene
Length = 436
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 146 QNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGHIIKECP 205
+ KM A A+AA + K G R C+ C + HI C + C C KPGH+ + C
Sbjct: 346 KQKMQFLAEAFAAINVKGDGEVQR---CYGCGKPGHIRRDCKNQKCFKCGKPGHLQRNCK 402
Query: 206 TR 207
++
Sbjct: 403 SK 404
>gi|260666132|gb|ACX47905.1| gag protein [Feline immunodeficiency virus]
Length = 450
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 169 RQVQCFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
+Q CF+CK+ H+ +C K CN C KPGH+ +C
Sbjct: 373 QQPVCFNCKKPGHLARQCRDVKRCNRCGKPGHLAAKC 409
>gi|147766266|emb|CAN74461.1| hypothetical protein VITISV_032891 [Vitis vinifera]
Length = 971
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQ 59
M W++ S++ + N +K AK++W+ K +Y+ N ++ L+ ++ QG+ ++
Sbjct: 3 MAWLVNSMEPKIGRNYLSYKIAKEIWDTAKVMYSDLGNVSQLFDLQSKLKEKKQGDSTVI 62
Query: 60 NYFSGFQNLWAE--YVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMN 117
+Y++ LW E D P + +++ E+ + FL L EA L
Sbjct: 63 DYYNTLIGLWQELDLFDDNTGACPDYCIKYTKKL-EKERLFAFLHGLNNLDEAHGRILGT 121
Query: 118 RDLSPSLDVCFKELLREEQR 137
+ L P + F E+ REE R
Sbjct: 122 KPL-PGIQDAFSEVRREESR 140
>gi|259128074|gb|ACV94796.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R + ++CF+C + RH+ C KK C C K GH +K+C R N
Sbjct: 383 RGQKTIKCFNCGKVRHLAKNCRAPRKKGCWKCGKEGHQMKDCDGRQAN 430
>gi|166025510|gb|ABY78065.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C K GH +K+CP R N
Sbjct: 387 KTVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 431
>gi|414152152|gb|AFW99259.1| gag polyprotein, partial [Equine infectious anemia virus]
Length = 201
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C + H+ +C A K C CK+PGH K+C P+N
Sbjct: 87 KGGPLKAPQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRNAPKN 135
>gi|325635342|gb|ADZ33215.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +K CP R N
Sbjct: 386 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQAN 430
>gi|151413484|gb|ABS11203.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ GR+ R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 RGNGRNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|124389800|gb|ABN11082.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 380 KSNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|82568617|dbj|BAE48559.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 879
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 383 RNVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|4587602|gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1015
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 22 AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEY--VDMIYVQ 79
A ++W+ L ++ N + L +I QG++ + Y++ + LW E + + V
Sbjct: 97 ASEIWKDLATRFHITNLPRSYQLSQQIWSLQQGSMDLATYYTTLKTLWNELDGANCVTVC 156
Query: 80 VPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLA 139
+ ++ E ++ +FL L Y RS ++ + P L + L +Q L+
Sbjct: 157 KNCDCCKAMETKSEHARVIKFLAGLNESYAVIRSQIIMKKHIPELAGIYNLL---DQDLS 213
Query: 140 TQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKFCNYCKKPGH 199
+ I NA+A+ + M Q Y H ++ K C++C GH
Sbjct: 214 QRNITPVQ----NAVAFNFSA-------MEPTQASVNATYNHSKLQ-QKVICSHCGYTGH 261
Query: 200 IIKEC 204
+ +C
Sbjct: 262 TVDKC 266
>gi|325635350|gb|ADZ33222.1| gag protein [Human immunodeficiency virus 1]
gi|325635358|gb|ADZ33229.1| gag protein [Human immunodeficiency virus 1]
gi|325635366|gb|ADZ33236.1| gag protein [Human immunodeficiency virus 1]
gi|325635374|gb|ADZ33243.1| gag protein [Human immunodeficiency virus 1]
gi|325635382|gb|ADZ33250.1| gag protein [Human immunodeficiency virus 1]
gi|325635390|gb|ADZ33257.1| gag protein [Human immunodeficiency virus 1]
gi|325635406|gb|ADZ33271.1| gag protein [Human immunodeficiency virus 1]
gi|325635414|gb|ADZ33278.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +K CP R N
Sbjct: 386 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQAN 430
>gi|294861025|gb|ADF45406.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 386 RDQRKIVKCFNCGKTGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 434
>gi|55139337|gb|AAV41352.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + RHI C KK C C K GH +K+C R N
Sbjct: 384 RIVKCFNCGKGRHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|21671075|dbj|BAC02547.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 876
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH++K+C R N
Sbjct: 389 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHLMKDCTERQAN 433
>gi|325635398|gb|ADZ33264.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +K CP R N
Sbjct: 386 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQAN 430
>gi|195433631|ref|XP_002064813.1| GK15001 [Drosophila willistoni]
gi|194160898|gb|EDW75799.1| GK15001 [Drosophila willistoni]
Length = 1249
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 4 IMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIA--RYSQGNLSIQNY 61
I S+ S + +K TA + W L+ V+ ++ L ++ R + G + +Y
Sbjct: 58 ITLSVKPSQLAYIKNCLTAFEAWTRLRDVHQPKGPVRKVSLYNKLLSLRMTDGQ-DMPSY 116
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
+GF ++ + A VQ ++E+ + L L P YE + RD
Sbjct: 117 INGFSDVLDQLAG-----------AGVQ-INEELRTIILLSSLPPVYENFVVAIETRDDL 164
Query: 122 PSLDV-CFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMR------QVQCF 174
PS ++ C K L+EE T+ ++N A+ A +++ ++ R Q+ C+
Sbjct: 165 PSFEILCIK--LKEEAERKRLTVTKENGQE----AFVAMQNRNRNQNARTQRNRSQITCY 218
Query: 175 SCKEYRHIVVKCAKK 189
C H+ +C K+
Sbjct: 219 KCGRQGHVKAQCGKE 233
>gi|399520|sp|P31821.1|GAG_FIVT2 RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix
protein p15; Short=MA; Contains: RecName: Full=Capsid
protein p24; Short=CA; Contains: RecName: Full=p1;
Contains: RecName: Full=Nucleocapsid protein p13;
Short=NC
gi|323949|gb|AAA43072.1| gag protein [Feline immunodeficiency virus]
Length = 449
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C + K CN C KPGH+ C
Sbjct: 377 CFNCKKPGHLARQCKEAKRCNNCGKPGHLAANC 409
>gi|315272223|gb|ADU02677.1| gag protein [Equine infectious anemia virus]
Length = 400
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 299 CYNCGKPGHFSSQCKAPKLCFKCKQPGHFSKQCRNAPKNGKQGAQG 344
>gi|110750438|gb|ABG90413.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C + GH +K+CP R N
Sbjct: 384 RIVKCFNCGKDGHIAKNCRAPRKKGCWRCGREGHQMKDCPERQAN 428
>gi|344248828|gb|EGW04932.1| Zinc finger CCHC domain-containing protein 3 [Cricetulus griseus]
Length = 270
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 169 RQVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
RQ +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 216 RQDRCFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPKAVHNSVAAQ 263
>gi|124487798|gb|ABN11984.1| RNA-binding protein LIN-28-like protein [Maconellicoccus hirsutus]
Length = 124
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 166 RDMRQVQCFSCKEY-RHIVVKCA----KKFCNYCKKPGHIIKECPTR 207
R R+++C++C EY H+ KC K C++CK H+I +CP R
Sbjct: 36 RRPRKIRCYNCGEYGNHVAAKCKLGPMPKRCHHCKSEDHLIADCPHR 82
>gi|46137255|ref|XP_390319.1| hypothetical protein FG10143.1 [Gibberella zeae PH-1]
Length = 434
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECPTRP 208
+ A G+ +CF C E H +C C YCKK GH+ K+CP P
Sbjct: 35 GFNGAEDLGDGQPGGDDKCFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAP 91
>gi|21671029|dbj|BAC02524.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 871
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 383 RSVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|315272209|gb|ADU02665.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGRPGHFSSQCKAPKLCFKCKQPGHFSKQCRNAPKNGRQGAQG 430
>gi|213138301|gb|ACJ44814.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + RHI C KK C C K GH +K+C R N
Sbjct: 383 RIVKCFNCGKGRHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|407734435|gb|AFU28020.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 383 KGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKDGHQMKDCPERQAN 430
>gi|328834534|gb|AEB52933.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 KSNFRGPRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|301788510|ref|XP_002929671.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
Length = 206
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECP 205
Y+ + +D QV+C+ C E H+ + C+K C C + GH+ +ECP
Sbjct: 148 CYSCGEYGHIQKDCSQVKCYRCGETGHMAINCSKTSEVNCYRCGESGHLARECP 201
>gi|391340776|ref|XP_003744712.1| PREDICTED: protein lin-28 homolog [Metaseiulus occidentalis]
Length = 223
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 166 RDMRQVQCFSCKEY-RHIVVKCAK----KFCNYCKKPGHIIKECPTR 207
+ R+V+C++C E+ HI KC + K C+ CK H+I +CP R
Sbjct: 132 KKFRKVRCYNCGEFANHIAAKCNEGPLPKRCHQCKSSEHLIADCPAR 178
>gi|255986278|gb|ACU50522.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R++ CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 388 RNQRKIXCFNCGKEGHLXRXCRAPRKKGCWKCGKEGHQIKDCDERXAN 435
>gi|20042970|gb|AAM08778.1|AC016780_8 Hypothetical protein [Oryza sativa]
gi|31432088|gb|AAP53773.1| Zinc knuckle family protein [Oryza sativa Japonica Group]
gi|125574800|gb|EAZ16084.1| hypothetical protein OsJ_31529 [Oryza sativa Japonica Group]
Length = 800
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKK-FCNYCKKPGHIIKECP 205
+++CF+C E + V C K C CK PGHI CP
Sbjct: 251 EIKCFNCGESGYHQVNCQKPPLCYVCKNPGHISSHCP 287
>gi|407738202|gb|AFU31184.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 383 KGQKRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKDCPERQAN 430
>gi|78172851|gb|ABB29382.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 372 KSNFRGPRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 423
>gi|270381459|emb|CBI68307.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381463|emb|CBI68310.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381472|emb|CBI68315.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381481|emb|CBI68320.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381486|emb|CBI68323.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381490|emb|CBI68325.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381494|emb|CBI68327.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381498|emb|CBI68330.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381500|emb|CBI68331.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381504|emb|CBI68333.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381506|emb|CBI68334.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381509|emb|CBI68336.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381511|emb|CBI68337.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
gi|270381513|emb|CBI68338.1| gag polyprotein [HIV-1 M:B 2007_HIV_010]
Length = 499
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 390 KTVKCFNCGKEGHVARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 434
>gi|87042740|gb|ABD16377.1| gag protein [Feline immunodeficiency virus]
Length = 450
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C + K CN C KPGH+ C
Sbjct: 377 CFNCKKPGHLAKQCREAKRCNNCGKPGHLAANC 409
>gi|225056164|gb|ACN80887.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C+K GH +KEC R N
Sbjct: 387 RMVKCFNCGKEGHIAKNCRAPRKKGCWKCEKEGHQMKECTERQAN 431
>gi|126542357|gb|ABO16610.1| gag protein [Feline immunodeficiency virus]
gi|134284789|gb|ABO69481.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + ++E+VD ++ Q+ ES Q+V + K + P+ + A S+L D
Sbjct: 282 GPKEPYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANPECKRAMSHLRPEDK--- 336
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKGRDMRQ--VQCFSCK 177
++ +R Q + + +L Q + G+ R+ ++CF+C
Sbjct: 337 ----LEDKIRARQDIGSTAYKMNMLAQALQQVRVQQVQVKPKGNPGQGKRRGPLKCFNCG 392
Query: 178 EYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
+ H C A K CN C K GHI +C
Sbjct: 393 KIGHTARVCRAPKKCNKCGKTGHISTDC 420
>gi|206129664|gb|ACI05429.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 390 RNVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 434
>gi|158931144|sp|P05895.2|POL_SIVVT RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1467
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKEC 204
+GR V+C++C ++ H+ +C K C C KPGH+ K+C
Sbjct: 395 RGRPRPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDC 438
>gi|147858119|emb|CAN79672.1| hypothetical protein VITISV_012210 [Vitis vinifera]
Length = 1211
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 43/203 (21%)
Query: 7 SIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQ 66
S+D ++L+L+ +KT W K +Y D I R + +L + Y
Sbjct: 78 SVDPKILLHLRAYKTCFKFWTQAKGLYTND-----------IQRLYK-DLDLSTYIGQIA 125
Query: 67 NLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLM-----KLRPKYEAARSNLMNRDLS 121
+L E++ ++ P+ Q Q++ D+F M LR E ++
Sbjct: 126 SLQEEFLTVM----PLTPDVGAQ----QTQLDKFFMVLTLIGLRSNLEPVHDQILGGSSV 177
Query: 122 PSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRH 181
PSLD F LL R+++ L + + D+++ + S
Sbjct: 178 PSLDDVFAHLL----RISSTQTLPSDSISDSSVLVS--------------HTTSRGGRSG 219
Query: 182 IVVKCAKKFCNYCKKPGHIIKEC 204
+ + C YC K GH C
Sbjct: 220 NRGRGQRPHCTYCNKLGHTRDRC 242
>gi|408398051|gb|EKJ77187.1| hypothetical protein FPSE_02637 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKK---FCNYCKKPGHIIKECPTRP 208
+ A G+ +CF C E H +C C YCKK GH+ K+CP P
Sbjct: 35 GFDGAEDLGDGQPGGDDKCFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAP 91
>gi|255986516|gb|ACU50641.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
G R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 385 GNQRRTVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 433
>gi|255986634|gb|ACU50700.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R+ V+CF+C + HI C KK C C K GH++KEC R N
Sbjct: 384 RNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHLMKECTERQAN 432
>gi|55560885|gb|AAV53307.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C E H+ C K+ C C K GH +K+C R N
Sbjct: 384 RSQRKIKCFNCGEEGHLAKNCRAPRKRGCWKCGKEGHQMKDCTERQAN 431
>gi|328833993|gb|AEB52452.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RTVKCFNCGKEGHIARNCKAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|300811117|gb|ADK35845.1| gag protein [Equine infectious anemia virus]
gi|300811124|gb|ADK35851.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|213138275|gb|ACJ44802.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + RHI C KK C C K GH +K+C R N
Sbjct: 384 RIVKCFNCGKGRHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|71794585|emb|CAI28826.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R ++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 RGQRTIKCFNCGKEGHIAKSCRAPRKKGCWKCGKEGHQLKDCTERQAN 427
>gi|315272188|gb|ADU02647.1| gag protein [Equine infectious anemia virus]
Length = 487
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 387 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 432
>gi|225056148|gb|ACN80880.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|158931143|sp|P27980.2|POL_SIVVG RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1465
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKEC 204
+GR V+C++C ++ H+ +C K C C KPGH+ K+C
Sbjct: 395 RGRPRPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDC 438
>gi|126542359|gb|ABO16611.1| gag protein [Feline immunodeficiency virus]
gi|134284796|gb|ABO69487.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + ++E+VD ++ Q+ ES Q+V + K + P+ + A S+L D
Sbjct: 282 GPKEPYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANPECKRAMSHLRPEDK--- 336
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKGRDMRQ--VQCFSCK 177
+++ +R Q + + +L Q + G+ R+ ++CF+C
Sbjct: 337 ----WEDKIRACQDIGSTAYKMNMLAQALQQVRVQQVQVKSKNNPGQGKRKGPLKCFNCG 392
Query: 178 EYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
+ H+ C A K CN C K GHI +C
Sbjct: 393 KIGHMTRACRAPKKCNKCGKTGHISTDC 420
>gi|48843849|gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1204
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 11/204 (5%)
Query: 12 LILNLKLHKT--------AKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFS 63
L+ ++++H T A MW +L Y + A + + QG+ ++ +++
Sbjct: 104 LVASMEIHLTGEVVTLTSAHLMWTHLHDRYAPTSDALYLAMVRQEQSLQQGDSTVDEFYT 163
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKR-DQFLMKLRPKYEAARSNLMNRDLSP 122
++W + + Q H +R FL +LR +YE+ R+ L++R
Sbjct: 164 QLSSIWRQLDSLGPTICHTYPCCQRQRSHMDLRRIYDFLTRLRSEYESTRAQLLSRHPRV 223
Query: 123 SLDVCFKELLREEQRLATQTILQ--QNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYR 180
++ E+ EE RL IL + + +A +A+ + + +
Sbjct: 224 TIMEALTEIRSEEIRLREAGILPLPSSVLAVRTVASSASSTPAVHSTVSSSSSSARPPTT 283
Query: 181 HIVVKCAKKFCNYCKKPGHIIKEC 204
+ C YC K GH+ C
Sbjct: 284 VVPSTRGHLHCTYCDKDGHVESFC 307
>gi|225056152|gb|ACN80882.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|17046532|gb|AAL34571.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 143 ILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGH 199
+L + H N+I +++K R V+CF+C + HI C KK C C K GH
Sbjct: 359 VLAEAMSHTNSIMMQRSNFKG---PKRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGH 415
Query: 200 IIKECPTRPQN 210
+K+C R N
Sbjct: 416 QMKDCNERQAN 426
>gi|2944127|gb|AAC05234.1| gag protein [Human immunodeficiency virus 1]
Length = 505
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKG--RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHI 200
+++ ++AI +A +G R+ R+ V+CF+C + HI C KK C C K GH+
Sbjct: 368 SQVTNSAITNSATIMMQRGNFRNQRKIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHL 427
Query: 201 IKECPTRPQN 210
+K+C R N
Sbjct: 428 MKDCTERQAN 437
>gi|300811131|gb|ADK35857.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|299930353|gb|ADJ58384.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KG+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 KGQGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|315272181|gb|ADU02641.1| gag protein [Equine infectious anemia virus]
Length = 485
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|300811138|gb|ADK35863.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|299929817|gb|ADJ58116.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 383 KGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 430
>gi|315272230|gb|ADU02683.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|255739511|gb|ACU31693.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 376 KSNFRGPRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|255578761|ref|XP_002530238.1| conserved hypothetical protein [Ricinus communis]
gi|223530242|gb|EEF32144.1| conserved hypothetical protein [Ricinus communis]
Length = 317
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRS-HLEYEIARYSQGNLSIQ 59
++W++ SI+ + ++ D+W +K+++ N A R L+ +++ Q + S
Sbjct: 43 ISWLLNSIEPKVSEIFSYSTSSFDLWIAVKEMFGDMNNAARVFQLKKDLSDLRQSSRSFV 102
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRD 119
F+ W E +D+ + ++ + E+ K Q L L P Y+ +S+L+
Sbjct: 103 QLLGLFKAKWNE-LDLYRLYTTDSTI--ILYRSEEDKMFQLLAALGPDYDDLKSHLIMSP 159
Query: 120 LSPSLDVCFKELLREEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEY 179
PSL + REE + + M+ NA A +G + + F
Sbjct: 160 KLPSLQTVCNTIQREE--------VHRRVMNHNATANVV-----EGGQPAEARAFLSNTQ 206
Query: 180 RHIVVKCAKKFCNYCKKPGH 199
R + C++C+ GH
Sbjct: 207 RPYRGRQPDLKCSHCEHIGH 226
>gi|55560855|gb|AAV53292.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C E H+ C K+ C C K GH +K+C R N
Sbjct: 384 RGQRKIKCFNCGEEGHLAKNCRAPRKRGCWKCGKEGHQMKDCTERQAN 431
>gi|373842332|gb|AEY77155.1| gag protein [Human immunodeficiency virus]
Length = 501
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 389 KTVKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCPERQAN 433
>gi|225056162|gb|ACN80886.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHRMKECTERQAN 431
>gi|225056160|gb|ACN80885.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|21671073|dbj|BAC02546.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 871
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNY 193
R+ + + Q N NAI +++K R V+CF+C + HI C KK C
Sbjct: 358 RVLAEAMSQTN----NAILMQRSNFKGS---KRIVKCFNCGKEGHIAKNCRAPRKKGCWK 410
Query: 194 CKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 411 CGKEGHQMKDCTERQAN 427
>gi|299930105|gb|ADJ58260.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KG+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 KGQGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|21671063|dbj|BAC02541.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 873
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 368 NNAIMMQRSNFKGS---KRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTER 424
Query: 208 PQN 210
N
Sbjct: 425 QAN 427
>gi|21671067|dbj|BAC02543.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 873
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNY 193
R+ + + Q N NAI +++K R V+CF+C + HI C KK C
Sbjct: 358 RVLAEAMSQTN----NAILMQRSNFKGS---KRIVKCFNCGKEGHIAKNCRAPRKKGCWK 410
Query: 194 CKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 411 CGKEGHQMKDCTERQAN 427
>gi|404364137|gb|AFR66846.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|299930399|gb|ADJ58407.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KG+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 KGQGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|255986906|gb|ACU50835.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+G + V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 383 RGNQRKXVKCFNCGKAGHIAXNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|315272244|gb|ADU02695.1| gag protein [Equine infectious anemia virus]
Length = 485
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|315272174|gb|ADU02635.1| gag protein [Equine infectious anemia virus]
Length = 485
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|294860995|gb|ADF45391.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K GR+ R+ V+CF+C HI C KK C C + GH +K+C R N
Sbjct: 379 KGNGRNQRKNVKCFNCGREGHIARNCRAPRKKGCWKCGREGHQMKDCTERQAN 431
>gi|195954482|gb|ACG58934.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ RQ V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RNQRQNVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|114680435|ref|XP_001150561.1| PREDICTED: zinc finger CCHC domain-containing protein 3 [Pan
troglodytes]
Length = 405
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQAVVAS 220
Q +CF C E H+ C K CN C K GH +CP N A+Q A
Sbjct: 353 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQLTGAG 404
>gi|315272216|gb|ADU02671.1| gag protein [Equine infectious anemia virus]
Length = 400
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 299 CYNCGKPGHFSSQCKAPKICFKCKQPGHFSKQCRNAPKNGKQGAQG 344
>gi|315272195|gb|ADU02653.1| gag protein [Equine infectious anemia virus]
Length = 486
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 385 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 430
>gi|299930103|gb|ADJ58259.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KG+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 KGQGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|156052325|ref|XP_001592089.1| hypothetical protein SS1G_06328 [Sclerotinia sclerotiorum 1980]
gi|154704108|gb|EDO03847.1| hypothetical protein SS1G_06328 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 558
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Query: 107 KYEAARSNLM--NRDLSPSLDVCFKELLRE---EQRLATQTILQQNKMHDNAIAYAAAHW 161
K++ ++ L+ NR P+ D+ + L ++ +T + N N I W
Sbjct: 3 KFDEIKAELLHDNRAFVPNADIKYIGWLSRAALTKKASTIIVEFTNPEDANKIIDEGLIW 62
Query: 162 KSKG-------RDMRQVQCFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNCQA 213
+ + R R QC+ C+ Y HI +C A C YC K H K+CP +
Sbjct: 63 QGEAFQCERYDRQCRLKQCYKCQRYGHIGTQCKANTACGYCAK-AHNSKDCPDKSDKSTT 121
Query: 214 SQAVV 218
VV
Sbjct: 122 RNCVV 126
>gi|320410527|gb|ADW26992.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 171 VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 390 VKCFNCGRDGHIAKSCRAPRKKGCWKCGKEGHQMKDCPERQAN 432
>gi|82568587|dbj|BAE48539.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 842
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 137 RLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNY 193
R+ + + Q N NAI +++K R V+CF+C + HI C KK C
Sbjct: 358 RVLAEAMSQTN----NAILMQRSNFKGS---KRIVKCFNCGKEGHIARNCRAPRKKGCWK 410
Query: 194 CKKPGHIIKECPTRPQN 210
C K GH +K+C R N
Sbjct: 411 CGKEGHQMKDCTERQAN 427
>gi|402910570|ref|XP_003917942.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Papio anubis]
Length = 170
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+K C C + GH+ +ECP+
Sbjct: 123 KDCAQVKCYRCGETGHVAINCSKASQVNCYRCGESGHLARECPS 166
>gi|298204772|emb|CBI25270.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQN 60
M WI S+ + ++ + TA ++W L+K+++ + A+ L +++ +G LS+
Sbjct: 90 MCWIYSSLTKGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLHFQLQTTKKGGLSMME 149
Query: 61 YFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDL 120
Y +++ VD + LA + + EQ + L L KY + + +
Sbjct: 150 YLLKIKSI----VDNL--------LAIGENITEQDRILYLLAGLGAKYNSFVITVTSGHE 197
Query: 121 SPSLDVCFKELLREEQRLATQ 141
SL+ LL E RL Q
Sbjct: 198 PLSLEEIHSMLLTHENRLEQQ 218
>gi|13383737|gb|AAK21111.1|AF327878_1 gag protein [Equine infectious anemia virus]
Length = 400
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 299 CYNCGKPGHFSSQCKAPKICFKCKQPGHFSKQCRNAPKNGRQGAQG 344
>gi|328834167|gb|AEB52607.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 340
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF C + HI C KK C C K GH +K+CP R N
Sbjct: 226 RIVKCFRCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 270
>gi|51291459|gb|AAT99669.1| gag protein [Feline immunodeficiency virus]
Length = 449
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C K CN C KPGH+ +C
Sbjct: 377 CFNCKKPGHLARQCRDVKRCNKCGKPGHLAAKC 409
>gi|12407020|emb|CAC24816.1| GAG polyprotein [Feline immunodeficiency virus]
Length = 449
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 173 CFSCKEYRHIVVKC--AKKFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C AKK CN C KPGH+ C
Sbjct: 377 CFNCKKPGHLARQCRQAKK-CNNCGKPGHLAANC 409
>gi|126542373|gb|ABO16618.1| gag protein [Feline immunodeficiency virus]
Length = 502
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + +++++D +Y Q I+ + EV K+ L P+ + A S+L + SP
Sbjct: 307 GPKEDYSQFIDRLYAQ--IDQEQNSPEVKLYLKQSLSLANANPERKRAMSHL--KPESP- 361
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKG------RDMRQVQC 173
++ LR Q + T +L Q ++ A+ + KG R + +C
Sbjct: 362 ----LEDKLRACQEIGTTPYKMNMLAQALQNNGCNQVMQANVRPKGSQQGNRRPGQLFKC 417
Query: 174 FSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
F+C + H+ +C A + CN C K GHI +C
Sbjct: 418 FNCGKPGHMSRQCRAPRKCNNCGKTGHISTDC 449
>gi|21432|emb|CAA36614.1| unnamed protein product [Solanum tuberosum]
Length = 334
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 21 TAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIY-- 77
TAKD WE +++ Y+ +N ++ L+ E+ + QG + Y++ +LW E +D Y
Sbjct: 14 TAKDAWEAVRESYSDLENASQILELKIELWQAKQGENEVTTYYNEMVSLWQE-LDQCYND 72
Query: 78 -VQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQ 136
+ ++S+ ++ E + FL +L +++ RS ++ ++ P L F E+ EE
Sbjct: 73 EWECSMDSVK-AKKKEENERVYLFLARLNREFDKVRSRILGKNPLP-LRETFSEIRTEET 130
Query: 137 RLATQTILQQN---KMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAK 188
+ +L+ + ++ + A K++ ++ C CK+Y H C K
Sbjct: 131 --GRKVMLKPDLNVELKPVIDSSALVTVKNEEDKKKKPLCDHCKKYWHTRETCWK 183
>gi|325634573|gb|ADZ32556.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 389 RTVKCFNCGKEGHIARNCRAPRKKGCWRCGKEGHQMKECTERQAN 433
>gi|242031734|gb|ACS77857.1| gag protein [Human immunodeficiency virus 1]
Length = 453
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + RHI C KK C C + GH +K+C R N
Sbjct: 367 RTVKCFNCGKERHIARNCRAPRKKGCWKCGREGHQMKDCTERQAN 411
>gi|385843047|gb|AFI80844.1| gag protein, partial [Human immunodeficiency virus 2]
Length = 146
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
R V+C++C + H +C +K C C KPGHI+ CP R
Sbjct: 74 RTVKCWNCGKEGHTAKQCRAPRRKGCWXCGKPGHIMTNCPER 115
>gi|383506323|gb|AFH37820.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 171 VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 390 VKCFNCGRDGHIAKXCRAPRKKGCWKCGKEGHQMKDCPERQAN 432
>gi|325636087|gb|ADZ33858.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 389 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 433
>gi|225056156|gb|ACN80883.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RMVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|386307125|gb|AFJ05542.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|320410530|gb|ADW26993.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 171 VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
V+CF+C HI C KK C C K GH +K+CP R N
Sbjct: 390 VKCFNCGRDGHIAKXCRAPRKKGCWKCGKEGHQMKDCPERQAN 432
>gi|213138150|gb|ACJ44746.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 385 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 429
>gi|6815586|gb|AAF28536.1|AF184404_1 gag protein [Human immunodeficiency virus 1]
Length = 238
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 188 RGQRTVKCFNCGKEGHIARNCKAPRKKGCWKCGKEGHQMKDCTERQAN 235
>gi|386307157|gb|AFJ05558.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386307155|gb|AFJ05557.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386307147|gb|AFJ05553.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386307137|gb|AFJ05548.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|300720402|gb|ADK33240.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RXVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|213495585|gb|ACJ49052.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI C KK C C+K GH IKEC R N
Sbjct: 387 KPVKCFNCGKEGHIARNCRAPRKKGCWKCEKEGHQIKECTERQAN 431
>gi|386307151|gb|AFJ05555.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|325634565|gb|ADZ32549.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 389 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 433
>gi|308445394|gb|ADO32873.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ R ++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 RNNRTIKCFNCGKGGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|308479388|ref|XP_003101903.1| hypothetical protein CRE_08340 [Caenorhabditis remanei]
gi|308262526|gb|EFP06479.1| hypothetical protein CRE_08340 [Caenorhabditis remanei]
Length = 3098
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 133 REEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDM-----------RQVQCFSCKEYRH 181
R E+ A Q+ K I H+ S+ R M ++ +C C H
Sbjct: 368 RNEKSSADNNRFQEKKARKCLICNRENHYMSQCRTMPNPSDRTKFLEKEDRCGQCLRKGH 427
Query: 182 IVVKCAKKFCNYCKKPGHIIKECP 205
C K CN C KPGH CP
Sbjct: 428 KTSSCPGKVCNRCNKPGHHFGNCP 451
>gi|218184522|gb|EEC66949.1| hypothetical protein OsI_33586 [Oryza sativa Indica Group]
Length = 715
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKK-FCNYCKKPGHIIKECP 205
+++CF+C E + V C K C CK PGHI CP
Sbjct: 251 EIKCFNCGESGYHQVNCQKPPLCYVCKNPGHISSHCP 287
>gi|120883|sp|P27978.1|GAG_SIVVG RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|334403|gb|AAA91913.1| gag polyprotein [Simian immunodeficiency virus]
Length = 521
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 56 LSIQNYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNL 115
+S+ + G + + +YVD Y + E + EV + + P + L
Sbjct: 293 VSVLDIRQGPKEAFKDYVDRFYKAIRAEQASG--EVKQWMTESLLIQNANPDCKVILKGL 350
Query: 116 -MNRDLSPSLDVC-------FKELLREE--QRLATQTILQQNKMHDNAIAYAAAHWKSKG 165
M+ L L C +K + E Q + +Q ++QQ +G
Sbjct: 351 GMHPTLEEMLTACQGVGGPSYKAKVMAEMMQNMQSQNMMQQGG--------------QRG 396
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKEC 204
R V+C++C ++ H+ +C K C C KPGH+ K+C
Sbjct: 397 RPRPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDC 438
>gi|386307121|gb|AFJ05540.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|390462456|ref|XP_002747447.2| PREDICTED: zinc finger CCHC domain-containing protein 3 [Callithrix
jacchus]
Length = 482
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 429 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSMAAQ 475
>gi|386307145|gb|AFJ05552.1| gag protein, partial [Human immunodeficiency virus 1]
gi|386307153|gb|AFJ05556.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386307123|gb|AFJ05541.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|259124539|gb|ACV93418.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C E H+ C KK C C K GH +K+C R N
Sbjct: 383 RGQKRIKCFNCGEEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|386307141|gb|AFJ05550.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386307135|gb|AFJ05547.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|32766108|gb|AAP69119.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQTN 426
>gi|55139278|gb|AAV41300.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|325634557|gb|ADZ32542.1| gag protein [Human immunodeficiency virus 1]
gi|325635939|gb|ADZ33729.1| gag protein [Human immunodeficiency virus 1]
gi|325635994|gb|ADZ33777.1| gag protein [Human immunodeficiency virus 1]
gi|325636024|gb|ADZ33803.1| gag protein [Human immunodeficiency virus 1]
gi|325636063|gb|ADZ33837.1| gag protein [Human immunodeficiency virus 1]
gi|325636079|gb|ADZ33851.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 389 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 433
>gi|300719931|gb|ADK32926.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|166025796|gb|ABY78208.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
++ R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 388 KNQRTVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 435
>gi|48843818|gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQN 210
+ KG + C C++ H C KK CN CK+ GHI K C TR N
Sbjct: 254 REKGTSSSNLWCDICQKSSHTTYMCWKKMTCNKCKRKGHIAKYCRTREIN 303
>gi|16610191|emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
Length = 594
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 66/221 (29%)
Query: 21 TAKDMWEYLKKVYNQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQV 80
+AK++WE L+ Y++D K S E+ +Y Q + VD I +
Sbjct: 367 SAKELWEELRSTYDEDFGTKSS----EVNKYLQFLM----------------VDGISILE 406
Query: 81 PIESLADVQE--------VHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELL 132
++ L + + + E + KL P ++ R+ LM+ ++ PSLD+ L
Sbjct: 407 QVQELHKIADSLMASGIWIDENFHISAIIAKLPPSWKDCRTRLMHENV-PSLDMLMHH-L 464
Query: 133 REEQRLATQTILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKF-- 190
R E + +N H+ + ++ +D+ + QC++C + HI C ++
Sbjct: 465 RVEDDCRNRY---RNDKHEKRVG-------ARKKDLSKKQCYNCGKEGHISKYCTERNYQ 514
Query: 191 ------------------------CNYCKKPGHIIKECPTR 207
C C K GHI K C R
Sbjct: 515 GCEKSNGRESETIPVVTEAKINGQCYNCGKEGHISKYCTER 555
>gi|386307131|gb|AFJ05545.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|297522375|gb|ADI44378.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C HI C KK C C K GH +KEC R N
Sbjct: 383 RDKRKTVKCFNCGREGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|36365374|gb|AAQ86596.1| gag protein [Human immunodeficiency virus 1]
gi|36365437|gb|AAQ86652.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 391 KNVKCFNCGKEGHIARKCTAPRKKGCWKCAKEGHQMKDCTERQAN 435
>gi|32766090|gb|AAP69110.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|255986542|gb|ACU50654.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
K R R+++CF+C HI C KK C C K GH +K+C R N
Sbjct: 383 KGNFRSQRKIKCFNCGREGHIAKHCRAPRKKGCWKCGKEGHQMKDCTERQAN 434
>gi|225056150|gb|ACN80881.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|164418922|gb|ABY54763.1| gag protein [Human immunodeficiency virus 1]
Length = 484
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 355 NNAILMQRSNFKG---SKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 411
Query: 208 PQN 210
N
Sbjct: 412 QAN 414
>gi|396075560|gb|AFN81274.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S R+ R ++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 375 RSNFRNQRPIKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCTERQAN 426
>gi|255986868|gb|ACU50816.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ GR+ R+ V+CF+C HI C KK C C K GH +K+C R N
Sbjct: 381 RGNGRNQRKTVKCFNCGREGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 433
>gi|209576125|gb|ACI64032.1| gag protein [Human immunodeficiency virus 1]
Length = 106
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
KS R ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 18 KSNFRGPKRIKCFNCGKDGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 69
>gi|206129559|gb|ACI05379.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ ++CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 388 KTIKCFNCGKEGHIAAKCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|451170215|gb|AGF32658.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|282598041|gb|ADA83285.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 377 RSNFRGQRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQAN 428
>gi|259125447|gb|ACV93783.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 RNQKRIKCFNCGKEGHLARNCGAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|160337089|gb|ABX25834.1| gag protein [Feline immunodeficiency virus]
Length = 498
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + ++ ++D +Y Q I+ + EV K+ + P+ + A S+L + SP
Sbjct: 303 GPKEDYSNFIDRLYAQ--IDQEQNSPEVKLYLKQSLSIANANPECKRAMSHL--KPESP- 357
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKG------RDMRQVQC 173
+E LR Q + T +L Q + A+ + +G R + ++C
Sbjct: 358 ----LEEKLRACQEIGTTPYKMNMLAQALQSNGCNQVMQANTRPRGPQQGNRRPNQSLKC 413
Query: 174 FSCKEYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
F+C + H+ +C A + CN C K GHI +C
Sbjct: 414 FNCGKPGHLSRQCRAPRKCNNCGKTGHISTDC 445
>gi|117643971|gb|ABK51662.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++CF+C + HI C KK C C + GH +K+CP R N
Sbjct: 385 RIIKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCPERQAN 429
>gi|13383730|gb|AAK21105.1|AF327877_1 gag protein [Equine infectious anemia virus]
Length = 400
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 173 CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQNC-QASQA 216
C++C + H +C A K C CK+PGH K+C P+N Q +Q
Sbjct: 299 CYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRNAPKNGKQGAQG 344
>gi|259128483|gb|ACV94960.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 382 RGQRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 429
>gi|195927726|gb|ACG55522.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 RDQRKTVKCFNCGKEGHIAXNCRAPRKKGCWKCGKEGHQMKDCTGRQAN 432
>gi|451170285|gb|AGF32716.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|320128406|gb|ADW19496.1| gag protein [Human immunodeficiency virus 1]
Length = 481
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 361 NNAIMMQRSNFKG---SKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 417
Query: 208 PQN 210
N
Sbjct: 418 QAN 420
>gi|204304679|gb|ACH99187.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 365 NNAILMQRSNFKG---SKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 421
Query: 208 PQN 210
N
Sbjct: 422 QAN 424
>gi|32766094|gb|AAP69112.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|255985993|gb|ACU50380.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 159 AHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+++++GR+ ++CF+C + HI C KK C C K GH +KEC R N
Sbjct: 381 GNFRNQGRN---IKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|32766098|gb|AAP69114.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|451170279|gb|AGF32711.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|451170203|gb|AGF32648.1| gag protein [Human immunodeficiency virus 1]
gi|451170273|gb|AGF32706.1| gag protein [Human immunodeficiency virus 1]
gi|451170291|gb|AGF32721.1| gag protein [Human immunodeficiency virus 1]
gi|451170320|gb|AGF32745.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|409684325|gb|AFV34241.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
RD ++++CF+C + H+ C K+ C C K GH +K+C R N
Sbjct: 383 RDQKRIKCFNCGKEGHLARNCRAPRKRGCWKCGKEGHQMKDCTERQAN 430
>gi|339431362|gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
Length = 1249
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
M+W+ S+ + ++A D+W+ +K++Y NQ+N A+ L+ ++ +Q +
Sbjct: 88 MSWLFNSMGSKVSEIFSFSESAFDLWKAVKEIYGNQNNAARIFELQKNLSVLNQDGKTFI 147
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSN-LMNR 118
+ +++W E + + A + + E+ K Q L L YE RS+ LM+
Sbjct: 148 EHLGRLKSMWNE---LNLYRPHTTDPAILLKQAEEDKVFQLLSSLDSTYEDLRSHILMSV 204
Query: 119 DLSP 122
+L P
Sbjct: 205 ELPP 208
>gi|238632988|gb|ACR51089.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
++++ NAI +++++ R ++CF+C + H+ C KK C C K GH +KE
Sbjct: 368 SQVNSNAIMMQRGNFRNQ---KRTIKCFNCGKEEHLARNCRAPRKKGCWKCGKEGHQMKE 424
Query: 204 CPTRPQN 210
C R N
Sbjct: 425 CTERQAN 431
>gi|15054664|gb|AAK82677.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C E H+ C KK C C K GH +K+C R N
Sbjct: 383 RGQKRIKCFNCGEEGHLARSCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|451170267|gb|AGF32701.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|451170232|gb|AGF32672.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|451170185|gb|AGF32633.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|255986113|gb|ACU50440.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|213138237|gb|ACJ44784.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RNVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|32766092|gb|AAP69111.1| gag protein [Human immunodeficiency virus 1]
gi|32766106|gb|AAP69118.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|326486508|gb|ADZ76332.1| gag protein, partial [Human immunodeficiency virus 1]
gi|343168848|gb|AEL96795.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 154 IAYAAAHWKSKG--------RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIK 202
+A A +H +S G + R+++CF+C H+ C KK C C K GH +K
Sbjct: 363 LAEAMSHMQSAGIMMQKGNFKGQRKIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMK 422
Query: 203 ECPTRPQN 210
+C R N
Sbjct: 423 DCTERQAN 430
>gi|270008355|gb|EFA04803.1| hypothetical protein TcasGA2_TC014852 [Tribolium castaneum]
Length = 361
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 189 KFCNYCKKPGHIIKECPTRPQN 210
KFCNYCKK GH+I EC R N
Sbjct: 299 KFCNYCKKQGHLINECRKREYN 320
>gi|229661973|gb|ACQ84421.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|384500510|gb|EIE91001.1| hypothetical protein RO3G_15712 [Rhizopus delemar RA 99-880]
Length = 476
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA-----KKFCNYCKKPGHII 201
N D+ Y A+WK C C E H +C K+ C YC KPGHI
Sbjct: 252 NPETDDCSVYIHAYWKEM-----PTYCKYCHELGHSASECQQAPSNKRVCYYCYKPGHIR 306
Query: 202 KECPTR 207
+CP +
Sbjct: 307 VQCPDK 312
>gi|374430140|gb|AEZ51383.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CFSC + HI C KK C C K GH +KEC R N
Sbjct: 384 KTVKCFSCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|77553001|gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1588
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 1 MTWIMGSIDQSLILNLKLHKTAKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQ 59
+ W+M S+ S+ ++ + A +W+ L +Y + N + ++ Q ++Q
Sbjct: 126 VAWLMTSVSPSIARMIEAIQNATIIWKTLSNMYSGEGNVMMMVEAQDKVDNLKQEGRTVQ 185
Query: 60 NYFSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKR-DQFLMKLRPKYEAARSNLMNR 118
Y S Q+LWA+ +Q+ + + Q +R FL L ++E R+ + ++
Sbjct: 186 EYASELQHLWADLDHYDPLQLKHDDDIVIGNKWLQRRRFIHFLKGLNKEFEDRRAAMFHQ 245
Query: 119 DLSPSLDVCFKELLREEQR 137
P+++ +++EE R
Sbjct: 246 ATLPNMEEAISAMVQEEMR 264
>gi|384496321|gb|EIE86812.1| hypothetical protein RO3G_11523 [Rhizopus delemar RA 99-880]
Length = 476
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA-----KKFCNYCKKPGHII 201
N D+ Y A+WK C C E H +C K+ C YC KPGHI
Sbjct: 252 NPETDDCSVYIHAYWKEM-----PTYCKYCHELGHSASECQQAPSNKRVCYYCYKPGHIR 306
Query: 202 KECPTR 207
+CP +
Sbjct: 307 VQCPDK 312
>gi|259128114|gb|ACV94816.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C E H+ C KK C C K GH +K+C R N
Sbjct: 383 RGQKRIKCFNCGEEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|32766104|gb|AAP69117.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|32766088|gb|AAP69109.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|451170227|gb|AGF32668.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RPVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|384498595|gb|EIE89086.1| hypothetical protein RO3G_13797 [Rhizopus delemar RA 99-880]
Length = 476
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA-----KKFCNYCKKPGHII 201
N D+ Y A+WK C C E H +C K+ C YC KPGHI
Sbjct: 252 NPETDDCSVYIHAYWKEM-----PTYCKYCHELGHSASECQQAPSNKRVCYYCYKPGHIR 306
Query: 202 KECPTR 207
+CP +
Sbjct: 307 VQCPDK 312
>gi|164418904|gb|ABY54754.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 359 NNAILMQRSNFKG---SKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 415
Query: 208 PQN 210
N
Sbjct: 416 QAN 418
>gi|441442333|gb|AGC32031.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ +C KK C C K GH IK+C R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARQCRAPRKKGCWKCGKEGHQIKDCTERQAN 430
>gi|5668923|gb|AAD46075.1|AF076475_1 gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+ AI ++K RD V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 369 NTAIMMQKGNFKGPRRD---VKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTER 425
Query: 208 PQN 210
N
Sbjct: 426 QAN 428
>gi|227057917|gb|ACP18925.1| gag protein [Human immunodeficiency virus 1]
Length = 488
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 143 ILQQNKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGH 199
+L + H N I +++K R V+CF+C + HI C KK C C K GH
Sbjct: 359 VLAEAMSHTNNIMMQRSNFKG---SKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGH 415
Query: 200 IIKECPTRPQN 210
+K+C R N
Sbjct: 416 QMKDCTERQAN 426
>gi|134086049|gb|ABO52878.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
NAI +++S+ + V+CF+C + HI C KK C C K GH +KEC R
Sbjct: 373 SNAIMMQRGNFRSQ---RKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTER 429
Query: 208 PQN 210
N
Sbjct: 430 QAN 432
>gi|32766102|gb|AAP69116.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 382 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 426
>gi|19912265|dbj|BAB88554.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 503
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + RHI C KK C C K GH +K+C R N
Sbjct: 392 KAVKCFNCGKERHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|259128494|gb|ACV94963.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 384 RGQRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|383506241|gb|AFH37779.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RIVKCFNCGKXGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|259129107|gb|ACV95224.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+V C KK C C K GH +K+C R N
Sbjct: 383 RGQKRIKCFNCGKEGHLVRNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|109131255|ref|XP_001096279.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Macaca mulatta]
gi|355757474|gb|EHH60999.1| Zinc finger CCHC domain-containing protein 13 [Macaca fascicularis]
Length = 170
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECPT 206
+D QV+C+ C E H+ + C+K C C + GH+ +ECP+
Sbjct: 123 KDCAQVKCYRCGETGHVAINCSKASQVNCYRCGESGHLARECPS 166
>gi|441638964|ref|XP_004093152.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 3 [Nomascus leucogenys]
Length = 407
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 354 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 400
>gi|147772735|emb|CAN60627.1| hypothetical protein VITISV_018874 [Vitis vinifera]
Length = 416
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 22 AKDMWEYLKKVY-NQDNTAKRSHLEYEIARYSQGNLSIQNYFSGFQNLWAEYVDMIYVQV 80
AKD+W+ +++ Y + +N ++ L+ + + QG+ + Y++ LW + + +
Sbjct: 117 AKDVWDGIRETYSDAENASQIFELKTRLWKMKQGDRKVTKYYTEMLGLWQD--PDLNCKK 174
Query: 81 PIESLAD---VQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQR 137
E D ++ E + +FL+ L + + RS ++NR PS+ F + +EE R
Sbjct: 175 EWECTGDSVRFKKKMENERVFEFLVGLNCELDDVRSRVLNRRPLPSIREVFSVVQQEESR 234
>gi|395752155|ref|XP_003780642.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 3 [Pongo abelii]
Length = 407
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 354 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 400
>gi|212722300|ref|NP_001131354.1| uncharacterized protein LOC100192675 [Zea mays]
gi|194691294|gb|ACF79731.1| unknown [Zea mays]
gi|414873649|tpg|DAA52206.1| TPA: hypothetical protein ZEAMMB73_492803 [Zea mays]
Length = 168
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKK-FCNYCKKPGHIIKECPTRPQN 210
Q C++CKE HI +C + C+ C K GH+ ++CPT N
Sbjct: 96 QTVCWNCKESGHIASECKNEALCHACNKTGHLARDCPTSGAN 137
>gi|82568609|dbj|BAE48554.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 492
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH++K+C R N
Sbjct: 384 RIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHLLKDCAERHAN 428
>gi|326437736|gb|EGD83306.1| hypothetical protein PTSG_03915 [Salpingoeca sp. ATCC 50818]
Length = 315
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 173 CFSCKEYRHIVVKC------AKKFCNYCKKPGHIIKEC 204
C+ C E H+ +C +K C+ C+KPGHI ++C
Sbjct: 203 CYVCGERGHLAARCPRSTYNGEKLCHVCRKPGHIARDC 240
>gi|429249174|gb|AFZ77631.1| gag protein [Human immunodeficiency virus 1]
Length = 488
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 368 NNAIMMQRSNFKG---SKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTER 424
Query: 208 PQN 210
N
Sbjct: 425 QAN 427
>gi|334884494|gb|AEH21358.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S + R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 379 RSNFKGQRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|119710415|gb|ABL96405.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 260
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
++ R+++CF+C + HI C KK C C K GH IK+C R N
Sbjct: 49 KNQRKIKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQIKDCTERQAN 96
>gi|261872050|gb|ACY02859.1| gag polyprotein [Equine infectious anemia virus]
Length = 426
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 164 KGRDMRQVQ-CFSCKEYRHIVVKC-AKKFCNYCKKPGHIIKECPTRPQN 210
KG ++ Q C++C++ H+ +C K C CK+PGH ++C P+N
Sbjct: 373 KGGPIKAKQTCYNCRKPGHLSSQCRTPKVCFKCKEPGHFSRQCRNNPKN 421
>gi|17352344|gb|AAL01563.1| gag [Human immunodeficiency virus 1]
Length = 492
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C K C C K GH +K+CP R N
Sbjct: 381 RGQKRIKCFNCGKEGHLARNCRAPRKXGCWKCGKEGHQMKDCPERQAN 428
>gi|23396534|sp|Q9NUD5.1|ZCHC3_HUMAN RecName: Full=Zinc finger CCHC domain-containing protein 3
Length = 404
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 351 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 397
>gi|386306928|gb|AFJ05444.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|259126537|gb|ACV94239.1| gag protein [Human immunodeficiency virus 1]
gi|259126555|gb|ACV94247.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
NA A KG+ R+++CF+C + H+ C KK C C K GH +KEC R
Sbjct: 372 NAAAVMMQRGNFKGQ--RRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQ 429
Query: 209 QN 210
N
Sbjct: 430 AN 431
>gi|225581286|gb|ACN94812.1| gag protein [Human immunodeficiency virus 1]
gi|294860927|gb|ADF45357.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 162 KSKGRDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K RD R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 KGNFRDQRKTVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|320410175|gb|ADW26874.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RIVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|166026380|gb|ABY78500.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
K R+ R+++CF+C H+ C KK C C K GH +K C R N
Sbjct: 382 KGNFRNNRKIKCFNCGREGHLARNCRAPGKKGCWKCGKEGHQMKXCTERQAN 433
>gi|260533614|gb|ACX45025.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 KGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|86277637|gb|ABC88354.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH++K+C R N
Sbjct: 386 RIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHLMKDCTERQAN 430
>gi|6815545|gb|AAF28495.1|AF184363_1 gag protein [Human immunodeficiency virus 1]
Length = 254
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S R R ++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 200 RSNFRGQRTIKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCTERQAN 251
>gi|119499962|ref|XP_001266738.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
gi|119414903|gb|EAW24841.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
Length = 491
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKF------CNYCKKPGHIIKECP 205
K RD+ V C +C+E H C +K CN C + GHIIK CP
Sbjct: 392 KPRDVSTVTCRNCEEVGHFSRDCPQKKDWSKVKCNNCGEMGHIIKRCP 439
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 169 RQVQCFSCKEYRHIVVKCAKK-----FCNYCKKPGHIIKECPTRP----QNCQA 213
+ + CF+C E H +C K C C K GH ECP RP +NCQ+
Sbjct: 85 KGMACFNCGEEGHSKAECTKPRVFKGPCRICSKEGHPAAECPDRPPDVCKNCQS 138
>gi|87131043|gb|ABD24125.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 382 RGQRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 429
>gi|358022906|gb|AEU03927.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R R ++CF+C + H+ C K+ C C K GH +K+C R N
Sbjct: 379 KSNFRGQRTIKCFNCGKEGHLARNCRAPRKRGCWKCGKEGHQMKDCTERQAN 430
>gi|386306942|gb|AFJ05451.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|386306932|gb|AFJ05446.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|259126560|gb|ACV94249.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
NA A KG+ R+++CF+C + H+ C KK C C K GH +KEC R
Sbjct: 372 NAAAIMMQRGNFKGQ--RRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQ 429
Query: 209 QN 210
N
Sbjct: 430 AN 431
>gi|259126515|gb|ACV94228.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|225056094|gb|ACN80854.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI KC K+ C C K GH +K+C R N
Sbjct: 386 RTVKCFNCGKEGHIAKKCRAPRKRGCWKCGKEGHQMKDCTERQAN 430
>gi|386306960|gb|AFJ05460.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|386306944|gb|AFJ05452.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|242030724|gb|ACS77370.1| gag protein [Human immunodeficiency virus 1]
Length = 462
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 369 RMVKCFNCGKEGHIARNCRAPGKKGCWKCGKEGHQMKDCTERQAN 413
>gi|164418430|gb|ABY54522.1| gag protein [Human immunodeficiency virus 1]
Length = 488
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HIV C KK C C K GH +K+C R N
Sbjct: 374 RIVKCFNCGKEGHIVRNCRAPRKKGCWKCGKEGHQMKDCTERQAN 418
>gi|166025770|gb|ABY78195.1| gag protein [Human immunodeficiency virus 1]
Length = 511
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 RPRRSVKCFNCGKDGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|36365446|gb|AAQ86660.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 392 KNVKCFNCGKEGHIARKCRAPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|36365473|gb|AAQ86684.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 392 KNVKCFNCGKEGHIARKCRTPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|386306966|gb|AFJ05463.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|386306964|gb|AFJ05462.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|386306934|gb|AFJ05447.1| gag protein, partial [Human immunodeficiency virus 1]
gi|386306950|gb|AFJ05455.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|299482814|gb|ADJ19221.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RPVKCFNCGKEGHVAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|255739125|gb|ACU31500.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
KS R+ ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 376 KSNFRNYKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|147809669|emb|CAN59866.1| hypothetical protein VITISV_013438 [Vitis vinifera]
Length = 1040
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 21/134 (15%)
Query: 3 WIMGSIDQSLILNLKLHKTAKDMWEYLKKVYNQ-DNTAKRSHLEYEIARYSQGNLSIQNY 61
W++ S++ + KTAKD+W+ K++Y+ N ++ + ++ +G S+ Y
Sbjct: 93 WLINSMEPKISRRYLFLKTAKDVWDTTKRMYSDLGNVSQVFEIRSKLKEMKKGTQSVIQY 152
Query: 62 FSGFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLS 121
F+ L D E+ + FL L + R +++R
Sbjct: 153 FT--------------------DLEDNDRNLERERVYDFLGGLNLDLDEIRGRVLSRVPF 192
Query: 122 PSLDVCFKELLREE 135
P++D F E+ +EE
Sbjct: 193 PTIDEAFAEVHKEE 206
>gi|404364110|gb|AFR66837.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
G R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 GNQKRTVKCFNCGKIGHIAKNCRAPRKKGCWKCGKEGHQMKDCIERQAN 432
>gi|402882898|ref|XP_003904969.1| PREDICTED: zinc finger CCHC domain-containing protein 3 [Papio
anubis]
Length = 402
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 349 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 395
>gi|386306922|gb|AFJ05441.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 493
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 379 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 423
>gi|260533724|gb|ACX45124.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 388 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 435
>gi|222428369|gb|ACM50025.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 153 AIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQ 209
AI +++S+G+ V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 375 AIMMQRGNFRSQGKS---VKCFNCGKIGHIAKNCRAPRKKGCWKCGKEGHQMKDCDERQA 431
Query: 210 N 210
N
Sbjct: 432 N 432
>gi|209576183|gb|ACI64061.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
KS R ++++CF+C + H+ C KK C C K GH +K+CP R N
Sbjct: 18 KSNFRGPKRIKCFNCGKDGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQAN 69
>gi|109092511|ref|XP_001111701.1| PREDICTED: zinc finger CCHC domain-containing protein 3-like
isoform 2 [Macaca mulatta]
Length = 402
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 349 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 395
>gi|403300895|ref|XP_003941149.1| PREDICTED: zinc finger CCHC domain-containing protein 3 [Saimiri
boliviensis boliviensis]
Length = 304
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 251 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSMAAQ 297
>gi|299929821|gb|ADJ58118.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+D ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 384 KDQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 431
>gi|259126541|gb|ACV94241.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|29648305|ref|NP_149080.2| zinc finger CCHC domain-containing protein 3 [Homo sapiens]
gi|46812645|gb|AAH69238.1| Zinc finger, CCHC domain containing 3 [Homo sapiens]
gi|119631089|gb|EAX10684.1| zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 350 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 396
>gi|88853349|emb|CAJ01227.1| gag-pol precursor [Human immunodeficiency virus 1]
Length = 1431
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 377 KGNFRGPRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|386306946|gb|AFJ05453.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|326370901|gb|ADZ56649.1| gag protein [Human immunodeficiency virus 1]
Length = 508
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 386 RDQRKTVKCFNCGKGGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 434
>gi|226345522|gb|ACO49256.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
R V+CF+C + HI C KK C C + GH +K+CP R
Sbjct: 23 RSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCPGR 64
>gi|395863010|ref|XP_003803706.1| PREDICTED: cellular nucleic acid-binding protein-like [Otolemur
garnettii]
Length = 170
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 155 AYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKKF---CNYCKKPGHIIKECP 205
Y+ + +D QV+C+ C E H+ + C+K C C + GH+ +ECP
Sbjct: 112 CYSCGEFGHIQKDCTQVKCYRCGETGHVAINCSKATEVNCYRCGESGHLARECP 165
>gi|386306940|gb|AFJ05450.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|384365691|gb|AFH76574.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 152 NAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRP 208
NA+ KG+ R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 372 NAVGIMMQRGNFKGQ-RRNVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQ 430
Query: 209 QN 210
N
Sbjct: 431 AN 432
>gi|259129127|gb|ACV95232.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCRKCGKEGHQMKDCTERQAN 430
>gi|259126533|gb|ACV94237.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|121708529|ref|XP_001272160.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
gi|119400308|gb|EAW10734.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
Length = 488
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 169 RQVQCFSCKEYRHIVVKCAKK-----FCNYCKKPGHIIKECPTRP----QNCQA 213
+ + CF+C E H +C K C C K GH ECP RP +NCQ+
Sbjct: 83 KGMACFNCGEEGHSKAECTKPRVFKGSCRICNKEGHPAAECPDRPPDVCKNCQS 136
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 164 KGRDMRQVQCFSCKEYRHIVVKCAKKF------CNYCKKPGHIIKECP 205
K RD+ V C +C E H C KK CN C + GH IK CP
Sbjct: 390 KPRDVSTVTCRNCDEVGHFSRDCTKKKDWSKVKCNNCGEMGHTIKRCP 437
>gi|410209420|gb|JAA01929.1| zinc finger, CCHC domain containing 3 [Pan troglodytes]
gi|410288174|gb|JAA22687.1| zinc finger, CCHC domain containing 3 [Pan troglodytes]
Length = 406
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 353 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 399
>gi|386306948|gb|AFJ05454.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|386306938|gb|AFJ05449.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 383 RAVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 427
>gi|225056239|gb|ACN80923.1| gag protein [Human immunodeficiency virus 1]
Length = 516
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 154 IAYAAAHWKSKG--RDMRQV-QCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+ AA KG R+ R+V +CF+C HIV C KK C C K GH IK+C R
Sbjct: 375 VTNPAAVMMQKGNFRNQRKVVKCFNCGREGHIVRNCRAPRKKGCWKCGKEGHQIKDCTER 434
Query: 208 PQN 210
N
Sbjct: 435 QAN 437
>gi|311274658|ref|XP_003134416.1| PREDICTED: zinc finger CCHC domain-containing protein 3-like [Sus
scrofa]
Length = 402
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 349 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 395
>gi|22596474|gb|AAN03238.1|AF457080_1 gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 381 RGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|554970|gb|AAA44694.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 487
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|407736966|gb|AFU30152.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C H+ C KK C C K GH +KEC R N
Sbjct: 383 KGQRKIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|291388770|ref|XP_002710931.1| PREDICTED: zinc finger, CCHC domain containing 3 [Oryctolagus
cuniculus]
Length = 408
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 355 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 401
>gi|238632973|gb|ACR51079.1| gag protein [Human immunodeficiency virus 1]
gi|238632985|gb|ACR51087.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
++++ NAI +++++ R ++CF+C + H+ C KK C C K GH +KE
Sbjct: 368 SQVNSNAIMMQRGNFRNQ---KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKE 424
Query: 204 CPTRPQN 210
C R N
Sbjct: 425 CTERQAN 431
>gi|126542361|gb|ABO16612.1| gag protein [Feline immunodeficiency virus]
gi|134284803|gb|ABO69493.1| gag [Feline immunodeficiency virus]
Length = 462
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 64 GFQNLWAEYVDMIYVQVPIESLADVQEVHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPS 123
G + ++E+VD ++ Q+ ES Q+V + K + P+ + A S+L D
Sbjct: 282 GPKEPYSEFVDRLFKQIEAESAP--QDVKQYLKDSLSISNANPECKRAMSHLRPEDK--- 336
Query: 124 LDVCFKELLREEQRLATQT----ILQQNKMHDNAIAYAAAHWKSKGRDMRQ--VQCFSCK 177
++ +R Q + + +L Q + G+ R+ ++CF+C
Sbjct: 337 ----LEDKIRACQDIGSTAYKMNMLAQALQQVRVQQVQVKPKGNPGQGKRRGPLKCFNCG 392
Query: 178 EYRHIVVKC-AKKFCNYCKKPGHIIKEC 204
+ H+ C A K CN C K GHI +C
Sbjct: 393 KIGHMARVCRAPKKCNKCGKTGHISTDC 420
>gi|259126552|gb|ACV94246.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|213137724|gb|ACJ44542.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R+V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 383 RKVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|166026020|gb|ABY78320.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKC---AKKFCNYCKKPGHIIKECPTRPQN 210
R+ ++V+CF+C + HI C KK C C + GH +K+C R N
Sbjct: 384 RNQKKVKCFNCGKEGHIAKNCRAPRKKGCWKCGREGHQMKDCTERQAN 431
>gi|148469886|gb|ABQ65876.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
KS R ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 377 KSNFRGTKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|36365392|gb|AAQ86612.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C + HI KC KK C C K GH +K+C R N
Sbjct: 392 KNVKCFNCGKEGHIARKCRAPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|29243008|emb|CAD70670.1| Gag protein [Simian immunodeficiency virus - mon]
Length = 192
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R Q++C++C ++ H+ C K C C K GH K CP QN
Sbjct: 63 RQGXQIRCYNCGKFGHVAKNCTAPRKTGCFRCGKEGHXSKNCPNGGQN 110
>gi|407736961|gb|AFU30148.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C H+ C KK C C K GH +KEC R N
Sbjct: 383 KGQRKIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259126513|gb|ACV94227.1| gag protein [Human immunodeficiency virus 1]
gi|259126527|gb|ACV94234.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH IK+C R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQIKDCTERQAN 431
>gi|55416413|gb|AAV50170.1| gag protein [Human immunodeficiency virus 1]
Length = 479
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 372 KGNFRGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 423
>gi|36365401|gb|AAQ86620.1| gag protein [Human immunodeficiency virus 1]
gi|36365455|gb|AAQ86668.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ V+CF+C E HI C KK C C K GH +K+C R N
Sbjct: 392 KNVKCFNCGEEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 436
>gi|22596554|gb|AAN03310.1|AF457088_1 gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 RGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 426
>gi|86753662|gb|ABD15079.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 380 RAKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|406856197|gb|AFS64059.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 388 RIVKCFNCGKEGHIAKNCXAPRKKGCWKCGKEGHQMKECTERQAN 432
>gi|386306674|gb|AFJ05321.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 384 RVVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 428
>gi|259126523|gb|ACV94232.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 384 KGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|300720198|gb|ADK33104.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 RNVKCFNCGKEGHIAXNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|55416399|gb|AAV50163.1| gag protein [Human immunodeficiency virus 1]
Length = 467
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECP 205
R ++++CF+C + H+ C KK C C K GH +K+CP
Sbjct: 373 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCP 415
>gi|33088552|gb|AAP93318.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 244
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R ++++CF+C + HI C KK C C K GH +K+C R N
Sbjct: 38 KGNFRGQKRIKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQLKDCTERQAN 89
>gi|32399658|emb|CAD59561.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 1437
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 389 RIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKECTERQAN 433
>gi|395758818|gb|AFN70480.1| gag protein [Human immunodeficiency virus 1]
gi|441442549|gb|AGC32164.1| gag protein [Human immunodeficiency virus 1]
gi|441442555|gb|AGC32168.1| gag protein [Human immunodeficiency virus 1]
gi|441442561|gb|AGC32172.1| gag protein [Human immunodeficiency virus 1]
gi|441442564|gb|AGC32174.1| gag protein [Human immunodeficiency virus 1]
gi|441442567|gb|AGC32176.1| gag protein [Human immunodeficiency virus 1]
gi|441442570|gb|AGC32178.1| gag protein [Human immunodeficiency virus 1]
gi|441442573|gb|AGC32180.1| gag protein [Human immunodeficiency virus 1]
gi|441442576|gb|AGC32182.1| gag protein [Human immunodeficiency virus 1]
gi|441442579|gb|AGC32184.1| gag protein [Human immunodeficiency virus 1]
gi|441442582|gb|AGC32186.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 KGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|147771812|emb|CAN66774.1| hypothetical protein VITISV_006776 [Vitis vinifera]
Length = 1031
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 91 VHEQSKRDQFLMKLRPKYEAARSNLMNRDLSPSLDVCFKELLREEQRLATQTILQQNKMH 150
+ E+ + FL LRP+Y+ ++ L+ +D+ P L F + EE R A +L+ N
Sbjct: 13 ILERERIFDFLAGLRPEYDEVQNRLLGKDVVPDLHEVFSVIRDEEXRRA--MMLRSNNEP 70
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKC 186
D ++ A+H + G C C + H C
Sbjct: 71 DQ-LSLKASHENTIGNKKNDXWCDFCNKDNHTREMC 105
>gi|56608687|gb|AAW02977.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+S R ++V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 376 RSNFRGPKRVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|77416891|sp|P24740.3|POL_HV1U4 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1428
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 RGPRRIKCFNCGKEGHLAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 426
>gi|407736956|gb|AFU30144.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C H+ C KK C C K GH +KEC R N
Sbjct: 383 KGQRKIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|157274060|gb|ABV28326.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CF+C + HI C KK C C K GH +KEC R N
Sbjct: 387 RVVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 431
>gi|441442552|gb|AGC32166.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
K R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 KGNFRGQRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|451170583|gb|AGF32977.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+D ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 383 KDQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|320128481|gb|ADW19545.1| gag protein [Human immunodeficiency virus 1]
Length = 483
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 151 DNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTR 207
+NAI +++K R V+CF+C + HI C KK C C K GH +K+C R
Sbjct: 363 NNAIMMQGSNFKG---PKRIVKCFNCGKQGHIAKNCRAPRKKGCWKCGKEGHQMKDCNER 419
Query: 208 PQN 210
N
Sbjct: 420 QAN 422
>gi|260533743|gb|ACX45141.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 379 RGNNRGPRRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 430
>gi|293346389|ref|XP_002726297.1| PREDICTED: zinc finger CCHC domain-containing protein 3 [Rattus
norvegicus]
gi|293358162|ref|XP_001072887.2| PREDICTED: zinc finger CCHC domain-containing protein 3 [Rattus
norvegicus]
gi|149031044|gb|EDL86071.1| rCG37285 [Rattus norvegicus]
Length = 400
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 347 QDRCFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPKAVHNSMAAQ 393
>gi|13487796|gb|AAK27724.1| gag polyprotein [Feline immunodeficiency virus]
Length = 450
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 173 CFSCKEYRHIVVKCAK-KFCNYCKKPGHIIKEC 204
CF+CK+ H+ +C K CN C KPGH+ C
Sbjct: 377 CFNCKKPSHLARQCKDVKRCNKCGKPGHLAVNC 409
>gi|77748089|gb|AAI07585.1| ZCCHC3 protein [Homo sapiens]
Length = 239
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 186 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 232
>gi|255739449|gb|ACU31662.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
++M+ N++ ++K R V+CF+C + HI C KK C C K GH +K+
Sbjct: 365 SQMNSNSVMMQRGNFKGA---KRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKD 421
Query: 204 CPTRPQN 210
C R N
Sbjct: 422 CTERQAN 428
>gi|119370129|gb|ABL68018.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++CF+C + HI C KK C C K GH +KEC R N
Sbjct: 385 RPIKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECTERQAN 429
>gi|88853350|emb|CAJ01233.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R R+++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 381 RGPRKIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|391379426|gb|AFM44085.1| gag protein [Human immunodeficiency virus 1]
Length = 506
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 166 RDMRQ-VQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
RD R+ V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 RDQRKAVKCFNCGKAGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 432
>gi|339786531|gb|AEK11432.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 169 RQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R V+CFSC + HI C KK C C K GH +K+C R N
Sbjct: 384 RIVKCFSCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQAN 428
>gi|259127601|gb|ACV94617.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 382 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 429
>gi|255986326|gb|ACU50546.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
+++ ++A A A + G + ++CF+C + HI C KK C C K GH +K+
Sbjct: 364 SQVTNSASASIMAQRGNYGNQRKAIKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKD 423
Query: 204 CPTRPQN 210
C R N
Sbjct: 424 CAERQAN 430
>gi|213138269|gb|ACJ44799.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 162 KSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
KS R ++++CF+C + H+ C KK C C K GH +K+C R N
Sbjct: 376 KSNFRGSKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 427
>gi|259128148|gb|ACV94833.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259128142|gb|ACV94830.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|238634306|gb|ACR52166.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
++++ NAI +++++ R ++CF+C + H+ C KK C C K GH +KE
Sbjct: 368 SQVNPNAIMMQRGNFRNQ---KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKE 424
Query: 204 CPTRPQN 210
C R N
Sbjct: 425 CTERQAN 431
>gi|166026324|gb|ABY78472.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 165 GRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
G + V+CF+C + HI C KK C C K GH +K+C R N
Sbjct: 384 GNQRKTVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCDGRQAN 432
>gi|407736971|gb|AFU30156.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
+ R+++CF+C H+ C KK C C K GH +KEC R N
Sbjct: 383 KGQRKIKCFNCGREGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|345789590|ref|XP_003433252.1| PREDICTED: zinc finger CCHC domain-containing protein 3 [Canis
lupus familiaris]
Length = 286
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 170 QVQCFSCKEYRHIVVKCAKKF-CNYCKKPGHIIKECPTRPQNCQASQ 215
Q +CF C E H+ C K CN C K GH +CP N A+Q
Sbjct: 233 QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSVAAQ 279
>gi|270014457|gb|EFA10905.1| hypothetical protein TcasGA2_TC001731 [Tribolium castaneum]
Length = 1398
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 158 AAHWKSKGRDMRQVQCFSCKEYRHIVVKCAKK----FCNYCKKPGHIIKECPTRPQNCQA 213
A+ K+ + R++ CF C++ H C+ + C C+ GH+ K+C + N +
Sbjct: 225 ASFGKNNAKSSRELICFKCQKPGHTANVCSARNREMRCTLCRSHGHVAKDCRNKTTNKPS 284
Query: 214 SQAVVA 219
Q VA
Sbjct: 285 DQKTVA 290
>gi|259128130|gb|ACV94824.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259128096|gb|ACV94807.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|259128094|gb|ACV94806.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 166 RDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKECPTRPQN 210
R ++++CF+C + H+ C KK C C K GH +KEC R N
Sbjct: 383 RGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQAN 430
>gi|238634242|gb|ACR52116.1| gag protein [Human immunodeficiency virus 1]
gi|238634248|gb|ACR52120.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 147 NKMHDNAIAYAAAHWKSKGRDMRQVQCFSCKEYRHIVVKCA---KKFCNYCKKPGHIIKE 203
++++ NAI +++++ R ++CF+C + H+ C KK C C K GH +KE
Sbjct: 368 SQVNPNAIMMQRGNFRNQ---KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKE 424
Query: 204 CPTRPQN 210
C R N
Sbjct: 425 CTERQAN 431
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.131 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,275,484,873
Number of Sequences: 23463169
Number of extensions: 121868046
Number of successful extensions: 408900
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 15042
Number of HSP's that attempted gapping in prelim test: 377724
Number of HSP's gapped (non-prelim): 18086
length of query: 220
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 83
effective length of database: 9,144,741,214
effective search space: 759013520762
effective search space used: 759013520762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)