Query 036142
Match_columns 114
No_of_seqs 110 out of 145
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 16:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036142.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036142hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k8fa_ b.80.5.1 (A:) C-termin 23.0 9.3 0.00068 26.6 0.3 12 13-24 4-15 (157)
2 d1k4za_ b.80.5.1 (A:) C-termin 16.1 16 0.0012 25.3 0.3 12 13-24 5-16 (157)
3 d2g3qa1 a.5.2.1 (A:1339-1381) 14.8 18 0.0013 20.4 0.1 7 1-7 14-20 (43)
4 d2flia1 c.1.2.2 (A:3-219) D-ri 12.9 40 0.0029 23.3 1.7 26 2-27 166-199 (217)
5 d1lwma_ a.21.1.1 (A:) NHP6a {B 8.6 1.4E+02 0.01 17.3 3.0 13 72-84 1-13 (93)
6 d1fcda2 c.3.1.5 (A:115-255) Fl 7.9 36 0.0026 21.8 -0.2 12 71-82 44-55 (141)
7 d1u7za_ c.72.3.1 (A:) Coenzyme 7.6 94 0.0068 21.2 2.0 23 14-36 3-25 (223)
8 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 7.6 31 0.0023 19.3 -0.6 5 1-5 22-26 (51)
9 d1wjia_ a.5.2.1 (A:) Tudor dom 7.1 48 0.0035 18.9 0.1 5 1-5 19-23 (63)
10 d1rpxa_ c.1.2.2 (A:) D-ribulos 6.6 98 0.0071 21.5 1.7 26 2-27 177-210 (230)
No 1
>d1k8fa_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.01 E-value=9.3 Score=26.64 Aligned_cols=12 Identities=50% Similarity=0.877 Sum_probs=9.5
Q ss_pred ccCCCcceEEec
Q 036142 13 LESENKKWVIAG 24 (114)
Q Consensus 13 ~~~~~kkwviag 24 (114)
++.+|+||+|--
T Consensus 4 ~eL~G~kW~VEn 15 (157)
T d1k8fa_ 4 LELEGKKWRVEN 15 (157)
T ss_dssp EEEETTEEEEES
T ss_pred EeecCCEEEEEe
Confidence 567899999954
No 2
>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=16.05 E-value=16 Score=25.26 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=9.2
Q ss_pred ccCCCcceEEec
Q 036142 13 LESENKKWVIAG 24 (114)
Q Consensus 13 ~~~~~kkwviag 24 (114)
++.+|+||.|-.
T Consensus 5 ~eL~g~kW~VEn 16 (157)
T d1k4za_ 5 KELVGNKWFIEN 16 (157)
T ss_dssp EEEETTEEEEEC
T ss_pred EEecCCEEEEEe
Confidence 567899999943
No 3
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=14.81 E-value=18 Score=20.39 Aligned_cols=7 Identities=43% Similarity=1.047 Sum_probs=5.2
Q ss_pred CCCCCcc
Q 036142 1 MGFSKKS 7 (114)
Q Consensus 1 mg~s~k~ 7 (114)
|||++..
T Consensus 14 MGF~e~~ 20 (43)
T d2g3qa1 14 MGFTEEE 20 (43)
T ss_dssp TTSCHHH
T ss_pred cCCCHHH
Confidence 8998743
No 4
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=12.91 E-value=40 Score=23.25 Aligned_cols=26 Identities=27% Similarity=0.534 Sum_probs=19.1
Q ss_pred CCCCcccccCCccCC--------CcceEEecccc
Q 036142 2 GFSKKSQTDGGLESE--------NKKWVIAGIAI 27 (114)
Q Consensus 2 g~s~k~q~~~~~~~~--------~kkwviagi~l 27 (114)
|++-+-|||||+..+ |--||++|-+|
T Consensus 166 ~~~~~I~vDGGIn~~~i~~l~~aGad~~V~Gsai 199 (217)
T d2flia1 166 GLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYL 199 (217)
T ss_dssp TCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHH
T ss_pred CCCeEEEEeCCCCHHHHHHHHHCCCCEEEEchHH
Confidence 344456899999876 56789988655
No 5
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.65 E-value=1.4e+02 Score=17.34 Aligned_cols=13 Identities=31% Similarity=0.644 Sum_probs=6.9
Q ss_pred CCCCCCCCCCCCC
Q 036142 72 LPCPPAPRKRRPS 84 (114)
Q Consensus 72 ~~CPPAPRK~r~~ 84 (114)
++||..|+++...
T Consensus 1 ~~tp~~~~k~~~k 13 (93)
T d1lwma_ 1 MVTPREPKKRTTR 13 (93)
T ss_dssp CCCSCCTTSCCCS
T ss_pred CCCCCCCCCcccc
Confidence 3456666555443
No 6
>d1fcda2 c.3.1.5 (A:115-255) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=7.91 E-value=36 Score=21.77 Aligned_cols=12 Identities=42% Similarity=1.068 Sum_probs=9.5
Q ss_pred CCCCCCCCCCCC
Q 036142 71 RLPCPPAPRKRR 82 (114)
Q Consensus 71 ~~~CPPAPRK~r 82 (114)
+..||+||-|.-
T Consensus 44 P~kCpgAP~e~a 55 (141)
T d1fcda2 44 PFRCPPGPYERA 55 (141)
T ss_dssp SCSSTTHHHHHH
T ss_pred CccCCchHHHHH
Confidence 477999998754
No 7
>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}
Probab=7.56 E-value=94 Score=21.22 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=0.0
Q ss_pred cCCCcceEEeccccccccCCeee
Q 036142 14 ESENKKWVIAGIAIRASLKPIKT 36 (114)
Q Consensus 14 ~~~~kkwviagi~l~~~LkPi~t 36 (114)
|..|++.+|.+-+=+.++.||+.
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ 25 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRY 25 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEE
T ss_pred ccCCCEEEEECCCCcccCCCcce
No 8
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.56 E-value=31 Score=19.35 Aligned_cols=5 Identities=60% Similarity=1.398 Sum_probs=0.0
Q ss_pred CCCCC
Q 036142 1 MGFSK 5 (114)
Q Consensus 1 mg~s~ 5 (114)
|||++
T Consensus 22 MGF~~ 26 (51)
T d2cpwa1 22 MGFPR 26 (51)
T ss_dssp HTCCH
T ss_pred cCCCH
No 9
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.10 E-value=48 Score=18.89 Aligned_cols=5 Identities=100% Similarity=1.550 Sum_probs=0.0
Q ss_pred CCCCC
Q 036142 1 MGFSK 5 (114)
Q Consensus 1 mg~s~ 5 (114)
|||++
T Consensus 19 MGF~~ 23 (63)
T d1wjia_ 19 MGFSK 23 (63)
T ss_dssp TTCCH
T ss_pred cCCCH
No 10
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=6.59 E-value=98 Score=21.51 Aligned_cols=26 Identities=27% Similarity=0.521 Sum_probs=0.0
Q ss_pred CCCCcccccCCccCC--------CcceEEecccc
Q 036142 2 GFSKKSQTDGGLESE--------NKKWVIAGIAI 27 (114)
Q Consensus 2 g~s~k~q~~~~~~~~--------~kkwviagi~l 27 (114)
++.-.-|||||+..+ |-.+|++|-+|
T Consensus 177 ~~~~~I~vDGGIn~~~i~~l~~~Gad~~V~GS~i 210 (230)
T d1rpxa_ 177 GLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAV 210 (230)
T ss_dssp TCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHH
T ss_pred CCceEEEEECCcCHHHHHHHHHcCCCEEEEChHH
Done!