BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036144
(336 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 230 bits (587), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 185/292 (63%), Gaps = 8/292 (2%)
Query: 44 FKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEV 102
F +EL A++NF+ ++G GG+G+VYKG + A +VAVK+L QG +F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
M+S+ H+NL+ L G+C +R+LVY +M+NGS+ + + P Q PLDW R +IA
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD-HVSTRVM 221
G+A+GL YLHD DP +I+RD KA+NILLD EF + DFGLAKL KD HV V
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDXHVXXAVR 204
Query: 222 GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQN--LVTWAKPLL 279
GT G+ APEY TG+ ++K+DV+ +GV+LLELITG+ A D +R + + + L+ W K LL
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
++ KK + D L+G Y + + Q + VA +C Q RP M +VV LE
Sbjct: 265 KE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 228 bits (581), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 183/292 (62%), Gaps = 8/292 (2%)
Query: 44 FKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEV 102
F +EL A++NF ++G GG+G+VYKG + A +VAVK+L QG +F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
M+S+ H+NL+ L G+C +R+LVY +M+NGS+ + + P Q PLDW R +IA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD-HVSTRVM 221
G+A+GL YLHD DP +I+RD KA+NILLD EF + DFGLAKL KD HV V
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDXHVXXAVR 196
Query: 222 GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQN--LVTWAKPLL 279
G G+ APEY TG+ ++K+DV+ +GV+LLELITG+ A D +R + + + L+ W K LL
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
++ KK + D L+G Y + + Q + VA +C Q RP M +VV LE
Sbjct: 257 KE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 172/287 (59%), Gaps = 9/287 (3%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
+L +AT NF+ L+G G +G+VYKG + +V A+K+ +QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAA 165
+H +LV+LIG+C + ++ IL+Y++M NG+L+ H DLP + W R++I GAA
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAA 149
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
+GL YLH A +I+RD K+ NILLD F PK++DFG++K G G+ H+ V GT G
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
Y PEY + G+LT+KSDVYSFGVVL E++ RSAI S P E NL WA + +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQL 265
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEY 332
+ DP L + + L + A CL ++ RP M DV+ LEY
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 171/287 (59%), Gaps = 9/287 (3%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
+L +AT NF+ L+G G +G+VYKG + +V A+K+ +QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSF 91
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAA 165
+H +LV+LIG+C + ++ IL+Y++M NG+L+ H DLP + W R++I GAA
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAA 149
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
+GL YLH A +I+RD K+ NILLD F PK++DFG++K G + H+ V GT G
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
Y PEY + G+LT+KSDVYSFGVVL E++ RSAI S P E NL WA + +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQL 265
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEY 332
+ DP L + + L + A CL ++ RP M DV+ LEY
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 173/304 (56%), Gaps = 24/304 (7%)
Query: 44 FKYQELADATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQ 93
F + EL + T NF+ + +GEGG+G VYKGY+ + VAVK+L D + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF--LDLPPDQEP 151
++F E+ +++ QH+NLV L+G+ +DGD LVY +M NGSL + LD P P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 129
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG 211
L W R KIA GAA G+ +LH+ I+RD K++NILLD F K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ + +R++GT Y APE A+ G++T KSD+YSFGVVLLE+ITG A+D R E Q L
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + + ++K D + + +VA CL E + RP + V L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 332 YLSS 335
+++
Sbjct: 303 EMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 172/304 (56%), Gaps = 24/304 (7%)
Query: 44 FKYQELADATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQ 93
F + EL + T NF+ + +GEGG+G VYKGY+ + VAVK+L D + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 72
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF--LDLPPDQEP 151
++F E+ +++ QH+NLV L+G+ +DGD LVY +M NGSL + LD P P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 129
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG 211
L W R KIA GAA G+ +LH+ I+RD K++NILLD F K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ + R++GT Y APE A+ G++T KSD+YSFGVVLLE+ITG A+D R E Q L
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + + ++K D + + +VA CL E + RP + V L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 332 YLSS 335
+++
Sbjct: 303 EMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 172/304 (56%), Gaps = 24/304 (7%)
Query: 44 FKYQELADATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQ 93
F + EL + T NF+ + +GEGG+G VYKGY+ + VAVK+L D + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 66
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF--LDLPPDQEP 151
++F E+ +++ QH+NLV L+G+ +DGD LVY +M NGSL + LD P P
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 123
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG 211
L W R KIA GAA G+ +LH+ I+RD K++NILLD F K+SDFGLA+
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ + R++GT Y APE A+ G++T KSD+YSFGVVLLE+ITG A+D R E Q L
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 237
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + + ++K D + + +VA CL E + RP + V L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
Query: 332 YLSS 335
+++
Sbjct: 297 EMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 141/233 (60%), Gaps = 21/233 (9%)
Query: 44 FKYQELADATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQ 93
F + EL + T NF+ + GEGG+G VYKGY+ + VAVK+L D + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEE 63
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF--LDLPPDQEP 151
++F E+ + + QH+NLV L+G+ +DGD LVY + NGSL + LD P P
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP---P 120
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG 211
L W R KIA GAA G+ +LH+ I+RD K++NILLD F K+SDFGLA+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
+ +R++GT Y APE A+ G++T KSD+YSFGVVLLE+ITG A+D R
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 8/208 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR--EFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G V++ D VAVK L R EF EV ++ ++H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+V E++S GSL L +E LD R+ +A AKG+ YLH+ +PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPI 160
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
++RD K+ N+L+D ++ K+ DFGL++L S GT + APE +
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 240 KSDVYSFGVVLLELITGRSAIDNSRPSE 267
KSDVYSFGV+L EL T + N P++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 8/208 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR--EFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G V++ D VAVK L R EF EV ++ ++H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+V E++S GSL L +E LD R+ +A AKG+ YLH+ +PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPI 160
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
++R+ K+ N+L+D ++ K+ DFGL++L + S GT + APE +
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNE 218
Query: 240 KSDVYSFGVVLLELITGRSAIDNSRPSE 267
KSDVYSFGV+L EL T + N P++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 33/213 (15%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
++G GG+G+VY+ + + VAVK D +Q E + ++++H N++ L
Sbjct: 14 IIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
G C LV EF G L N L +PPD ++W ++ A+G+ YLHD
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDIL-VNWAVQI------ARGMNYLHD 123
Query: 174 VADPPVIYRDFKASNILLDAEFNP--------KLSDFGLAKLGPTGGKDHVSTRV--MGT 223
A P+I+RD K+SNIL+ + K++DFGLA+ + H +T++ G
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGA 177
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
Y + APE +K SDV+S+GV+L EL+TG
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 25/214 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS-------REFFAEVLMLSLVQHQNLV 114
+G+GG+G V+KG + VVA+K L ++G +EF EV ++S + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L G + + +V EF+ G L + LD P+ W ++++ A G+EY+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN- 140
Query: 175 ADPPVIYRDFKASNILL-----DAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
+PP+++RD ++ NI L +A K++DFGL++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 230 EY--AMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E A T+K+D YSF ++L ++TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 25/214 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS-------REFFAEVLMLSLVQHQNLV 114
+G+GG+G V+KG + VVA+K L ++G +EF EV ++S + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L G + + +V EF+ G L + LD P+ W ++++ A G+EY+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN- 140
Query: 175 ADPPVIYRDFKASNILL-----DAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
+PP+++RD ++ NI L +A K++DF L++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 230 EY--AMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E A T+K+D YSF ++L ++TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 25/214 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS-------REFFAEVLMLSLVQHQNLV 114
+G+GG+G V+KG + VVA+K L ++G +EF EV ++S + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L G + + +V EF+ G L + LD P+ W ++++ A G+EY+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN- 140
Query: 175 ADPPVIYRDFKASNILL-----DAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
+PP+++RD ++ NI L +A K++DFG ++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 230 EY--AMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E A T+K+D YSF ++L ++TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V+ E +VAVK L + ++F E +L+++QHQ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE-----------PLDWFTRMKIAGGAA 165
G C +G ++V+E+M +G L PD + PL + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
G+ YL A ++RD N L+ K+ DFG+++ + V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRDKKK 284
+ PE + + T +SDV+SFGVVL E+ T G+ +E + +T + L R
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER---- 252
Query: 285 FTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
PR + A+ C Q + R + DV L+ L+
Sbjct: 253 -------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 289
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V+ E +VAVK L + ++F E +L+++QHQ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE-----------PLDWFTRMKIAGGAA 165
G C +G ++V+E+M +G L PD + PL + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
G+ YL A ++RD N L+ K+ DFG+++ + V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRDKKK 284
+ PE + + T +SDV+SFGVVL E+ T G+ +E + +T + L R
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER---- 258
Query: 285 FTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
PR + A+ C Q + R + DV L+ L+
Sbjct: 259 -------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 295
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V+ E +VAVK L + ++F E +L+++QHQ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE-----------PLDWFTRMKIAGGAA 165
G C +G ++V+E+M +G L PD + PL + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
G+ YL A ++RD N L+ K+ DFG+++ + V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRDKKK 284
+ PE + + T +SDV+SFGVVL E+ T G+ +E + +T + L R
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER---- 281
Query: 285 FTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
PR + A+ C Q + R + DV L+ L+
Sbjct: 282 -------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ EF+ GSL + L +E +D ++ KG+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 196
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 135
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 194
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 130
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 189
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 195
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESLT 190
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 188
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 197
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 162
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 221
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 19/205 (9%)
Query: 61 LVGEGGYGRVYKGYIEAV---DQVVAVKQLDRS-GNQGSREFFAEVLMLSLVQHQNLVNL 116
++G G +G V +G ++A + VA+K L + REF +E ++ +H N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLHD 173
G + +++ EFM NG+L++ FL L Q FT +++ G G A G+ YL +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDS-FLRLNDGQ-----FTVIQLVGMLRGIASGMRYLAE 136
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAPE 230
++ ++RD A NIL+++ K+SDFGL++ D T +G + APE
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 231 YAMTGQLTKKSDVYSFGVVLLELIT 255
+ T SD +S+G+V+ E+++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L +E +D ++ KG+EYL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKGMEYL---G 132
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+R+ NIL++ E K+ DFGL K+ P K++ + G + APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLT 191
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+G +G V Y + +VVAVK+L S + R+F E+ +L +QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 118 GYCADGDQR--ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
G C +R L+ E++ GSL ++ L E +D ++ KG+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDY---LQAHAERIDHIKLLQYTSQICKGMEYL---G 134
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
I+RD NIL++ E K+ DFGL K+ P K+ + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
+ + SDV+SFGVVL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 19/205 (9%)
Query: 61 LVGEGGYGRVYKGYIEAV---DQVVAVKQLDRS-GNQGSREFFAEVLMLSLVQHQNLVNL 116
++G G +G V +G ++A + VA+K L + REF +E ++ +H N++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLHD 173
G + +++ EFM NG+L++ FL L Q FT +++ G G A G+ YL +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDS-FLRLNDGQ-----FTVIQLVGMLRGIASGMRYLAE 134
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAPE 230
++ ++RD A NIL+++ K+SDFGL++ D T +G + APE
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 231 YAMTGQLTKKSDVYSFGVVLLELIT 255
+ T SD +S+G+V+ E+++
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+VG G +G V K A D VA+KQ++ + + F E+ LS V H N+V L G C
Sbjct: 16 VVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR---MKIAGGAAKGLEYLHDVADP 177
+ LV E+ GSL N EPL ++T M ++G+ YLH +
Sbjct: 72 LN--PVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 178 PVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+I+RD K N+LL A K+ DFG A + H+ T G+ + APE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSN 180
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
++K DV+S+G++L E+IT R D P R P L
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEI-----------GGPAFRIMWAVHNGTRPPLIKN 229
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYL 333
P+ ++ C +D RP M ++V + +L
Sbjct: 230 LPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+VG G +G V K A D VA+KQ++ + + F E+ LS V H N+V L G C
Sbjct: 15 VVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR---MKIAGGAAKGLEYLHDVADP 177
+ LV E+ GSL N EPL ++T M ++G+ YLH +
Sbjct: 71 LN--PVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 178 PVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+I+RD K N+LL A K+ DFG A + H+ T G+ + APE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSN 179
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
++K DV+S+G++L E+IT R D P R P L
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEI-----------GGPAFRIMWAVHNGTRPPLIKN 228
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYL 333
P+ ++ C +D RP M ++V + +L
Sbjct: 229 LPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 238 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 62 VGEGGYGRVYKGYIEAVD-----QVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V+ + +VAVK L ++F E +L+ +QH+++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFL-----------DLPPDQEP--LDWFTRMKIAGG 163
G C DGD I+V+E+M +G L N FL D P Q L + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
A G+ YL A ++RD N L+ A K+ DFG+++ + V M
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ PE M + T +SDV+SFGV+L E+ T
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 21/206 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V G+++ + VA+K L +SG + R+F +E ++ H N+++
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G +++ EFM NGSL++ FL Q FT +++ G G A G++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDS-FLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL- 151
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAP 229
AD ++RD A NIL+++ K+SDFGL++ D T +G + AP
Sbjct: 152 --ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELIT 255
E + T SDV+S+G+V+ E+++
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 62 VGEGGYGRVY--KGYIEAVDQ---VVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V+ + Y +Q +VAVK L + + ++F E +L+ +QH+++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQ------EPLDWFTR---MKIAGGAAKG 167
G C +GD I+V+E+M +G L PD P T+ + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
+ YL A ++RD N L+ K+ DFG+++ + V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M + T +SDV+S GVVL E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGLA++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 55/309 (17%)
Query: 47 QELADATENFNPDCL-----VGEGGYGRVYKGYIEAV----DQVVAVKQLDRSGNQGSR- 96
Q + T +P C+ +G G +G VYKG ++ + VA+K L + R
Sbjct: 32 QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV 91
Query: 97 EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT 156
+F E ++ H N++ L G + +++ E+M NG+L+ + D E F+
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGE----FS 145
Query: 157 RMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL------ 207
+++ G G A G++YL A+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 146 VLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202
Query: 208 ---GPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
+GGK + + APE + T SDV+SFG+V+ E++T R
Sbjct: 203 ATYTTSGGKIPIR--------WTAPEAISYRKFTSASDVWSFGIVMWEVMT-----YGER 249
Query: 265 PSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMV 324
P E + K + + T M P +YQ + C Q++ RP
Sbjct: 250 PYWELSNHEVMKAINDGFRLPTPMDCP--------SAIYQLMM---QCWQQERARRPKFA 298
Query: 325 DVVTALEYL 333
D+V+ L+ L
Sbjct: 299 DIVSILDKL 307
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 238 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 271
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 264
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 265 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 298
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 242
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 243 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 276
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 239
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 240 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 273
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 242
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 243 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 276
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 265
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 266 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 299
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 78 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 132
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 189 TIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 79 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 133
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 190 TIKSDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 77 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 86 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 140
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 197 TIKSDVWSFGILLTEIVT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 83 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 137
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 194 TIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 85 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 139
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 196 TIKSDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 77 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 83 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 137
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 194 TIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 82 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 136
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 193 TIKSDVWSFGILLTEIVT 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 77 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 30 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 142
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 143 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 253
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 254 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 303
Query: 332 YL 333
L
Sbjct: 304 KL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 87 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 141
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 198 TIKSDVWSFGILLTEIVT 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSN 256
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
K + + M P LYQ + C Q+D ++RP +V+ L+
Sbjct: 257 QDVIKAVDEGYRLPPPMDCP--------AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 3 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 115
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 226
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 227 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 276
Query: 332 YL 333
L
Sbjct: 277 KL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 20 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 132
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 133 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 243
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 244 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 293
Query: 332 YL 333
L
Sbjct: 294 KL 295
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 72 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 126
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 183 TIKSDVWSFGILLTEIVT 200
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+VF E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 4 DVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E+M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL ++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSN 256
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
K + + M P LYQ + C Q+D ++RP +V+ L+
Sbjct: 257 QDVIKAVDEGYRLPPPMDCP--------AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA H ++ G+ + APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 257
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 258 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 291
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA H ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 238 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 271
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H L + + + IA A+G++YLH + +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHH---LHASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM---TGQ 236
I+RD K++NI L + K+ DFGLA + H ++ G+ + APE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 237 LTKKSDVYSFGVVLLELITGR---SAIDN 262
+ +SDVY+FG+VL EL+TG+ S I+N
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINN 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H + + + + IA A+G++YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT---GQ 236
I+RD K++NI L + K+ DFGLA H ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ 296
+ +SDVY+FG+VL EL+TG+ N ++ + L D K +
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 265
Query: 297 YPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLS 334
P K + + +A CL++ D RP ++ ++E L+
Sbjct: 266 CP-KAMKRLMA---ECLKKKRDERPLFPQILASIELLA 299
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 184 ETDXXRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G G VY A Q VA++Q++ E+L++ ++ N+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V E+++ GSL + + D+ + R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIH 139
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ NILL + + KL+DFG A++ P K + ++GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 241 SDVYSFGVVLLELITGRSAIDNSRPSEEQNLV-TWAKPLLRDKKKFTMM 288
D++S G++ +E+I G N P L+ T P L++ +K + +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 255
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 256 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G G VY A Q VA++Q++ E+L++ ++ N+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V E+++ GSL + + D+ + R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIH 139
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ NILL + + KL+DFG A++ P K + ++GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 241 SDVYSFGVVLLELITGRSAIDNSRPSEEQNLV-TWAKPLLRDKKKFTMM 288
D++S G++ +E+I G N P L+ T P L++ +K + +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G G VY A Q VA++Q++ E+L++ ++ N+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V E+++ GSL + + D+ + R + LE+LH VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIH 140
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ NILL + + KL+DFG A++ P K + ++GT + APE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 241 SDVYSFGVVLLELITGRSAIDNSRPSEEQNLV-TWAKPLLRDKKKFT 286
D++S G++ +E+I G N P L+ T P L++ +K +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G G VY A Q VA++Q++ E+L++ ++ N+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V E+++ GSL + + D+ + R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIH 139
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ NILL + + KL+DFG A++ P K + ++GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 241 SDVYSFGVVLLELITGRSAIDNSRPSEEQNLV-TWAKPLLRDKKKFTMM 288
D++S G++ +E+I G N P L+ T P L++ +K + +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G VYKG V +K +D + Q + F EV +L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
D +V ++ SL H L + F + IA A+G++YLH +I+
Sbjct: 103 K-DNLAIVTQWCEGSSLYKH---LHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIH 155
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM---TGQLT 238
RD K++NI L K+ DFGLA + + G+ + APE +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 239 KKSDVYSFGVVLLELITGR---SAIDNSRPSEEQNLVTWAKPLLRDKKKFTM---MADPL 292
+SDVYS+G+VL EL+TG S I+N RD+ F + A P
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINN-----------------RDQIIFMVGRGYASPD 258
Query: 293 LEGQYPRKGLYQALA-VAGMCLQEDADSRPFMVDVVTALEYL 333
L Y K +A+ + C+++ + RP +++++E L
Sbjct: 259 LSKLY--KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 3 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E M NGSL++ FL Q F
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQ-----F 115
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS- 226
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ +++ + + P+ P LYQ + C Q+D ++RP +V+ L+
Sbjct: 227 ---NQDVIKAVDEGYRLPPPM---DCP-AALYQLML---DCWQKDRNNRPKFEQIVSILD 276
Query: 332 YL 333
L
Sbjct: 277 KL 278
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 21/206 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V G+++ + VA+K L +SG + R+F +E ++ H N+++
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G +++ EFM NGSL++ FL Q FT +++ G G A G++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDS-FLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL- 125
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAP 229
AD ++R A NIL+++ K+SDFGL++ D T +G + AP
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELIT 255
E + T SDV+S+G+V+ E+++
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + V + VA+K ++ + + R EF E ++ ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G +++ E M+ G L+++ L P+ E P +++AG A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-- 192
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+PE G T SDV+SFGVVL E+ T
Sbjct: 193 ----SPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 34/302 (11%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSR 96
T V ++ + DAT N + D +VG G +G V G ++ + VA+K L + R
Sbjct: 32 TQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
+F E ++ H N++ L G ++V E M NGSL++ FL Q F
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS-FLRKHDAQ-----F 144
Query: 156 TRMKIAG---GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
T +++ G G A G++YL D+ ++RD A NIL+++ K+SDFGL+++
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 213 KDHVSTRVMGT-YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
+ +TR + +PE + T SDV+S+G+VL E+++ RP E +
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSN 256
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
K + + M P LYQ + C Q+D ++RP +V+ L+
Sbjct: 257 QDVIKAVDEGYRLPPPMDCP--------AALYQLML---DCWQKDRNNRPKFEQIVSILD 305
Query: 332 YL 333
L
Sbjct: 306 KL 307
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 184 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 7 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHA 175
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ Q +V ++ SL +H L + + + IA A+G++YLH + +
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHH---LHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM---TGQ 236
I+RD K++NI L + K+ DFGLA H ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 237 LTKKSDVYSFGVVLLELITGR---SAIDN 262
+ +SDVY+FG+VL EL+TG+ S I+N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 73 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 127
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+R+ +A+NIL+ + K++DFGLA+L +D+ T G + APE G
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 184 TIKSDVWSFGILLTEIVT 201
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 3 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 57
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLL 115
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 116 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHA 171
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA--EVLMLSLVQ 109
+ E + LVGEG YG V K + ++VA+K+ S + + A E+ +L ++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
H+NLVNL+ C + LV+EF+ + L++ L+L P+ LD+ K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNG--LDYQVVQKYLFQIINGIG 138
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK---DHVSTRVMGTYGY 226
+ H +I+RD K NIL+ KL DFG A+ G+ D V+TR Y
Sbjct: 139 FCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR-----WY 190
Query: 227 CAPEYAMTGQLT--KKSDVYSFGVVLLELITGRSAIDNSRPSEEQ--------NLVTWAK 276
APE + G + K DV++ G ++ E+ G ++ NL+ +
Sbjct: 191 RAPE-LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 277 PLLRDKKKFTMMADPLLEGQYPRKGLYQALA-----VAGMCLQEDADSRPFMVDVV 327
L F + P ++ + P + Y L+ +A CL D D RPF +++
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G YG VY+G + VAVK L + EF E ++ ++H NLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ EFM+ G+L ++ + +++ + + +A + +EYL I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD A N L+ K++DFGL++L TG + APE + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 242 DVYSFGVVLLELIT-GRSAIDNSRPSEEQNLV 272
DV++FGV+L E+ T G S PS+ L+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 35 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 212 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G G V+ GY +V AVK L + G+ F AE ++ +QHQ LV L Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKV-AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ I ++ E+M NGSL + FL P + T K+ AA+ E + + + I
Sbjct: 77 VTQEPIYIITEYMENGSLVD-FLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYI 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+NIL+ + K++DFGLA+L +D T G + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL----IEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 26/224 (11%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 3 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 57
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 115
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL-------GPTG 211
+A + +EYL I+RD A N L+ K++DFGL++L P G
Sbjct: 116 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
K + + APE + + KSDV++FGV+L E+ T
Sbjct: 173 AKFPIK--------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 35 GKAKKTPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ 93
G +PN K++ E D T +G G YG VY+G + VAVK L +
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTM 55
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD 153
EF E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++
Sbjct: 56 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVN 113
Query: 154 WFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK 213
+ +A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 114 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDT 169
Query: 214 DHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G VYKG VAVK L+ + Q + F EV +L +H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
Q +V ++ SL +H L + + + IA A+G++YLH + +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHH---LHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM---TGQ 236
I+RD K++NI L + K+ DFGLA H ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 237 LTKKSDVYSFGVVLLELITGR---SAIDN 262
+ +SDVY+FG+VL EL+TG+ S I+N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 26/224 (11%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 4 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 58
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 116
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL-------GPTG 211
+A + +EYL I+RD A N L+ K++DFGL++L P G
Sbjct: 117 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
K + + APE + + KSDV++FGV+L E+ T
Sbjct: 174 AKFPIK--------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + V + VA+K ++ + + R EF E ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G +++ E M+ G L+++ L P+ E P +++AG A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-- 194
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+PE G T SDV+SFGVVL E+ T
Sbjct: 195 ----SPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 7 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLL 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G G VY A Q VA++Q++ E+L++ ++ N+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V E+++ GSL + + D+ + R + LE+LH VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH---SNQVIH 140
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
R+ K+ NILL + + KL+DFG A++ P K + ++GT + APE K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 241 SDVYSFGVVLLELITGRSAIDNSRPSEEQNLV-TWAKPLLRDKKKFT 286
D++S G++ +E+I G N P L+ T P L++ +K +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 33/211 (15%)
Query: 61 LVGEGGYGRVYKGYIE---AVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNL 116
++G G +G V G ++ D VA+K L + R +F E ++ H N+V+L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLHD 173
G G ++V EFM NG+L+ FL Q FT +++ G G A G+ YL D
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDA-FLRKHDGQ-----FTVIQLVGMLRGIAAGMRYLAD 163
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTGGKDHVSTRVMGTY 224
+ ++RD A NIL+++ K+SDFGL+++ TGGK V
Sbjct: 164 MG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR------- 213
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + T SDV+S+G+V+ E+++
Sbjct: 214 -WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 7 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G G V G + Q VA+K L ++G + R+F +E ++ H N++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G G ++V E+M NGSL+ FL Q FT M++ G G G+ YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQ-----FTIMQLVGMLRGVGAGMRYLS 168
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTGGKDHVSTRVMGT 223
D+ ++RD A N+L+D+ K+SDFGL+++ TGGK +
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR------ 219
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELI 254
+ APE + SDV+SFGVV+ E++
Sbjct: 220 --WTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 7 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 37 AKKTPNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGN 92
A + P +F+ + L ++ +G+G +G V Y + +VAVKQL SG
Sbjct: 13 ACQDPTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP 65
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGYC-ADGDQRI-LVYEFMSNGSLENHFLDLPPDQE 150
R+F E+ +L + +V G G Q + LV E++ +G L + L +
Sbjct: 66 DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF---LQRHRA 122
Query: 151 PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
LD + + KG+EYL ++RD A NIL+++E + K++DFGLAKL P
Sbjct: 123 RLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179
Query: 211 GGKDHVSTRVMGTYG--YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
KD+ R G + APE +++SDV+SFGVVL EL T
Sbjct: 180 -DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 4 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 58
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 116
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 117 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 172
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 35/211 (16%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G G V G + Q VA+K L ++G + R+F +E ++ H N++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G G ++V E+M NGSL+ FL Q FT M++ G G G+ YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQ-----FTIMQLVGMLRGVGAGMRYLS 168
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTGGKDHVSTRVMGT 223
D+ ++RD A N+L+D+ K+SDFGL+++ TGGK +
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR------ 219
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELI 254
+ APE + SDV+SFGVV+ E++
Sbjct: 220 --WTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 39 KTPNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQG 94
+ P +F+ + L ++ +G+G +G V Y + +VAVKQL SG
Sbjct: 2 QDPTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ 54
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYC-ADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPL 152
R+F E+ +L + +V G G Q + LV E++ +G L + L + L
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF---LQRHRARL 111
Query: 153 DWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
D + + KG+EYL ++RD A NIL+++E + K++DFGLAKL P
Sbjct: 112 DASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-D 167
Query: 213 KDHVSTRVMGTYG--YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
KD+ R G + APE +++SDV+SFGVVL EL T
Sbjct: 168 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR- 96
V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 97 EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------ 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P+ E
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 151 PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK---- 206
P +++AG A G+ YL+ ++RD A N + +F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 207 --LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 178 TDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 7 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLL 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 15 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 69
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 127
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 128 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 183
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 184 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G YG VY+G + VAVK L + EF E ++ ++H NLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ EFM+ G+L ++ + +++ ++ + +A + +EYL I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD A N L+ K++DFGL++L TG + APE + + KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 242 DVYSFGVVLLELIT 255
DV++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 39 KTPNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQG 94
+ P +F+ + L ++ +G+G +G V Y + +VAVKQL SG
Sbjct: 3 QDPTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ 55
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYC-ADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPL 152
R+F E+ +L + +V G G Q + LV E++ +G L + L + L
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF---LQRHRARL 112
Query: 153 DWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
D + + KG+EYL ++RD A NIL+++E + K++DFGLAKL P
Sbjct: 113 DASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-D 168
Query: 213 KDHVSTRVMGTYG--YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
KD+ R G + APE +++SDV+SFGVVL EL T
Sbjct: 169 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G YG VY+G + VAVK L + EF E ++ ++H NLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ EFM+ G+L ++ + +++ + + +A + +EYL I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD A N L+ K++DFGL++L TG + APE + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 242 DVYSFGVVLLELIT-GRSAIDNSRPSEEQNLV 272
DV++FGV+L E+ T G S PS+ L+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 2 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 56
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLL 114
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+RD A N L+ K++DFGL++L TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 170
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 151
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ L H T + A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 258
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 259 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G VY+G + VAVK L + EF E ++ ++H NLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ EFM+ G+L ++ + +++ + + +A + +EYL I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD A N L+ K++DFGL++L TG + APE + + KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 242 DVYSFGVVLLELIT-GRSAIDNSRPSEEQNLV 272
DV++FGV+L E+ T G S PS+ L+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 149
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 256
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 257 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSEEQ 269
+ DV+S G+VL ++ G D S ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y + + VAVK L SG + E+ +L + H+N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 117 IGYCA-DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C DG I L+ EF+ +GSL+ + LP ++ ++ ++K A KG++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEY---LPKNKNKINLKQQLKYAVQICKGMDYL--- 142
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV--STRVMGTYGYCAPEYA 232
++RD A N+L+++E K+ DFGL K T + R + Y APE
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
M + SDV+SFGV L EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y + + VAVK L SG + E+ +L + H+N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 117 IGYCA-DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C DG I L+ EF+ +GSL+ + LP ++ ++ ++K A KG++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEY---LPKNKNKINLKQQLKYAVQICKGMDYL--- 130
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV--STRVMGTYGYCAPEYA 232
++RD A N+L+++E K+ DFGL K T + R + Y APE
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
M + SDV+SFGV L EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 65
Query: 114 VNLIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAK 166
V L ++ + +V E+MS GSL +L LP + +A A
Sbjct: 66 VQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIAS 115
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 116 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEXTARQGAKFP 168
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + +++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQ 111
T +F L+ GR Y + + VV +KQ++ + + E LMLS+V H
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND--------ERLMLSIVTHP 66
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
++ + G D Q ++ +++ G L + P+ F A LEYL
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF----YAAEVCLALEYL 122
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
H +IYRD K NILLD + K++DFG AK P V+ + GT Y APE
Sbjct: 123 HS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEV 174
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRSAIDNS 263
T K D +SFG+++ E++ G + +S
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEXTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 73 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 123
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKIRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-- 199
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 242
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + + RP +++V L+
Sbjct: 243 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPS 266
+ DV+S G+VL ++ G D S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPS 266
+ DV+S G+VL ++ G D S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 68
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL +L LP + +A A
Sbjct: 69 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIA 117
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 118 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 170
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 171 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 41 PNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSR 96
P +F+ + L ++ +G+G +G V Y + +VAVKQL SG R
Sbjct: 1 PTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 53
Query: 97 EFFAEVLMLSLVQHQNLVNLIG--YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
+F E+ +L + +V G Y + LV E++ +G L + L + LD
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDF---LQRHRARLDA 110
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
+ + KG+EYL ++RD A NIL+++E + K++DFGLAKL P KD
Sbjct: 111 SRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKD 166
Query: 215 HVSTRVMGTYG--YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
R G + APE +++SDV+SFGVVL EL T
Sbjct: 167 XXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 148
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 255
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 256 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 147
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 254
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 255 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 3 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 150
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 150
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 145
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 252
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 253 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 29/212 (13%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + GN F E ++ ++H+ L
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAAK 166
V L ++ + +V E+MS GSL + +L LP + +A A
Sbjct: 243 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIAS 292
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--- 223
G+ Y+ + ++RD +A+NIL+ K++DFGL +L +D+ T G
Sbjct: 293 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLI----EDNEYTARQGAKFP 345
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 149
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 256
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 257 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 66
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 67 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 115
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 116 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 168
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 64
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 65 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 113
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 114 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 166
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 114 VNLIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAK 166
V L ++ + +V E+MS GSL +L LP + +A A
Sbjct: 325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIAS 374
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 375 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP 427
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL +L LP + +A A
Sbjct: 242 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIA 290
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 291 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 343
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 150
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 142
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 249
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 250 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 148
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 255
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 256 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 114 VNLIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAK 166
V L ++ + +V E+MS GSL +L LP + +A A
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIAS 291
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 292 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP 344
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G+G +G+ K +V+ +K+L R + R F EV ++ ++H N++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ + E++ G+L + Q P W R+ A A G+ YLH + +I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSM-DSQYP--WSQRVSFAKDIASGMAYLHSMN---II 130
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKL------GPTGGKD------HVSTRVMGTYGYCA 228
+RD + N L+ N ++DFGLA+L P G + V+G + A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
PE +K DV+SFG+VL E+I GR D
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 150
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 168
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 275
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 276 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 27/232 (11%)
Query: 42 NVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR 96
+V+ E A E +G+G +G VY+G + V + VA+K ++ + + R
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 97 -EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE----- 150
EF E ++ ++V L+G + G +++ E M+ G L+++ L P
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 151 -PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
P +++AG A G+ YL+ ++RD A N ++ +F K+ DFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 207 ---LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
GGK + R M +PE G T SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG++YL A
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 169
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ H T + A E
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 276
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 277 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-- 196
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 197 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 239
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + RP +++V L+
Sbjct: 240 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQLDRS-GNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K L+ + G + + EF E L+++ + H +LV
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + LV + M +G L + + + Q L+W ++ AKG+ YL
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 157
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
+ +++RD A N+L+ + + K++DFGLA+L K++ + + A E
Sbjct: 158 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ T +SDV+S+GV + EL+T
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 155
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 262
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 263 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM-- 199
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 242
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + RP +++V L+
Sbjct: 243 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 248 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 302
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 360
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+R+ A N L+ K++DFGL++L TG
Sbjct: 361 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 416
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 417 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL---A 151
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 258
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 259 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQLDRS-GNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K L+ + G + + EF E L+++ + H +LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + LV + M +G L + + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
+ +++RD A N+L+ + + K++DFGLA+L K++ + + A E
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ T +SDV+S+GV + EL+T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNL 116
++G G +G VY G + D AVK L+R + G +F E +++ H N+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 117 IGYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+G C + ++V +M +G L N + + D + AKG+++L A
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 209
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAM 233
++RD A N +LD +F K++DFGLA+ D V + + A E
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
T + T KSDV+SFGV+L EL+T + P + N LL+ ++ LL
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 316
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
+ +Y LY+ + C A+ RP ++V+ + + S
Sbjct: 317 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 206 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 260
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ ++ +
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 318
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+R+ A N L+ K++DFGL++L TG
Sbjct: 319 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHA 374
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 375 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ G + VA+K L + G F E ++ ++H LV L Y
Sbjct: 17 LGNGQFGEVWMGTWNG-NTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQE--PLDWFTRMKIAGGAAKGLEYLHDVADPP 178
++ I +V E+M+ GSL LD D E L + +A A G+ Y+ +
Sbjct: 73 VSEEPIYIVTEYMNKGSL----LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--- 125
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTG 235
I+RD +++NIL+ K++DFGLA+L +D+ T G + APE A+ G
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLI----EDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ T KSDV+SFG++L EL+T
Sbjct: 182 RFTIKSDVWSFGILLTELVT 201
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 114 VNLIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAK 166
V L ++ + +V E+MS GSL +L LP + +A A
Sbjct: 242 VQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLP---------QLVDMAAQIAS 291
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 292 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP 344
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 40 TPNVFKYQ-ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF 98
+PN K++ E D T +G G YG VY+G + VAVK L + EF
Sbjct: 209 SPNYDKWEMERTDITMKHK----LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 263
Query: 99 FAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM 158
E ++ ++H NLV L+G C ++ EFM+ G+L ++ + +++ + +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLL 321
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+A + +EYL I+R+ A N L+ K++DFGL++L TG
Sbjct: 322 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 377
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE + + KSDV++FGV+L E+ T
Sbjct: 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM-- 199
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 242
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + RP +++V L+
Sbjct: 243 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-- 199
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 242
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + RP +++V L+
Sbjct: 243 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 33/281 (11%)
Query: 61 LVGEGGYGRVYKGYIE---AVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNL 116
++G G +G V G ++ + VA+K L + R +F E ++ H N+++L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLHD 173
G ++V E+M NGSL+ FL Q FT +++ G G + G++YL D
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDT-FLKKNDGQ-----FTVIQLVGMLRGISAGMKYLSD 142
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYCAPEYA 232
+ ++RD A NIL+++ K+SDFGL+++ + +TR + APE
Sbjct: 143 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPL 292
+ T SDV+S+G+V+ E+++ RP E K + + + M P
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMTNQDVIKAVEEGYRLPSPMDCP- 253
Query: 293 LEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYL 333
LYQ + C Q++ +SRP ++V L+ L
Sbjct: 254 -------AALYQLMLD---CWQKERNSRPKFDEIVNMLDKL 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++RD A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-- 198
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 199 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 241
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + RP +++V L+
Sbjct: 242 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS GSL + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 49 LADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF-AEVLMLSL 107
+AD E F +G+G +G V+KG QVVA+K +D + E E+ +LS
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+ G G + ++ E++ GS LDL P D F + KG
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA----LDL-LRAGPFDEFQIATMLKEILKG 132
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGY 226
L+YLH I+RD KA+N+LL + + KL+DFG+A +L T K + +GT +
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT---FVGTPFW 186
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRP 265
APE K+D++S G+ +EL G + P
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS G L + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+M+ GSL +L LP + ++ A
Sbjct: 73 VQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP---------QLVDMSAQIA 121
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 122 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEWTARQGAKF 174
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSLEN-------HFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+MS G L + +L LP + +A A
Sbjct: 76 VQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP---------QLVDMAAQIA 124
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 125 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 177
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNLIGY 119
++G G V Y + VA+K+++ Q S E E+ +S H N+V+
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEP----LDWFTRMKIAGGAAKGLEYLHDVA 175
D+ LV + +S GS+ + + E LD T I +GLEYLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG---KDHVSTRVMGTYGYCAPEYA 232
I+RD KA NILL + + +++DFG++ TGG ++ V +GT + APE
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 233 -MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADP 291
K+D++SFG+ +EL TG + P + L P P
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------------P 240
Query: 292 LLEGQYPRKGLYQALA-----VAGMCLQEDADSRPFMVDVV 327
LE K + + + +CLQ+D + RP +++
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQL---DRSGNQGSREFFAEVLMLSLVQHQNLVNLIG 118
+G GG VY ++ VA+K + R + + F EV S + HQN+V++I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPP 178
+ D LV E++ +L + PL T + G+++ HD+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+++RD K NIL+D+ K+ DFG+AK L T + V+GT Y +PE A
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFSPEQAKGEAT 189
Query: 238 TKKSDVYSFGVVLLELITGR 257
+ +D+YS G+VL E++ G
Sbjct: 190 DECTDIYSIGIVLYEMLVGE 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++R+ A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-- 199
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 200 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 242
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + + RP +++V L+
Sbjct: 243 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNLIGY 119
++G G V Y + VA+K+++ Q S E E+ +S H N+V+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEP----LDWFTRMKIAGGAAKGLEYLHDVA 175
D+ LV + +S GS+ + + E LD T I +GLEYLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG---KDHVSTRVMGTYGYCAPEYA 232
I+RD KA NILL + + +++DFG++ TGG ++ V +GT + APE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 233 -MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADP 291
K+D++SFG+ +EL TG + P + L P P
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------------P 245
Query: 292 LLEGQYPRKGLYQALA-----VAGMCLQEDADSRPFMVDVV 327
LE K + + + +CLQ+D + RP +++
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
E+ + +G+G +G V+ G +V A+K L + G F E ++ ++H+ L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 114 VNLIGYCADGDQRI-LVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAA 165
V L Y ++ I +V E+M+ GSL +L LP + ++ A
Sbjct: 73 VQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP---------QLVDMSAQIA 121
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-- 223
G+ Y+ + ++RD +A+NIL+ K++DFGLA+L +D+ T G
Sbjct: 122 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKF 174
Query: 224 -YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE A+ G+ T KSDV+SFG++L EL T
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 49/291 (16%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+G+G +G VY+G + + VAVK ++ S + R EF E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE------PLDWFTRMKIAGGAAKGLE 169
L+G + G ++V E M++G L+++ L P+ E P +++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGT 223
YL+ ++R+ A N ++ +F K+ DFG+ + GGK + R M
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM-- 200
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
APE G T SD++SFGVVL E IT + S EQ L
Sbjct: 201 ----APESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------ 243
Query: 284 KFTMMADPLLEGQY---PRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
KF M +G Y P + + MC Q + + RP +++V L+
Sbjct: 244 KFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNLIGYC 120
+G G +G V+ G + A + +VAVK + + +F E +L H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 121 ADGDQRILVYEFMSNGSLENHFLD-LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+V E + G FL L + L T +++ G AA G+EYL
Sbjct: 182 TQKQPIYIVMELVQGGD----FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
I+RD A N L+ + K+SDFG+++ +GG V + + APE
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK------WTAPEALN 288
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
G+ + +SDV+SFG++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 35 GKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYI----EAVDQVVAVKQL-DR 89
G K +FK EL ++G G +G V+KG E++ V +K + D+
Sbjct: 1 GAMKVLARIFKETELRKLK-------VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK 53
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD----L 145
SG Q + +L + + H ++V L+G C G LV +++ GSL +H L
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 146 PPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA 205
P Q L+W ++ AKG+ YL + +++R+ A N+LL + +++DFG+A
Sbjct: 113 GP-QLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 162
Query: 206 KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
L P K + + + A E G+ T +SDV+S+GV + EL+T
Sbjct: 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNLIGYC 120
+G G +G V+ G + A + +VAVK + + +F E +L H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 121 ADGDQRILVYEFMSNGSLENHFLD-LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+V E + G FL L + L T +++ G AA G+EYL
Sbjct: 182 TQKQPIYIVMELVQGGD----FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAK------LGPTGGKDHVSTRVMGTYGYCAPEYAM 233
I+RD A N L+ + K+SDFG+++ +GG V + + APE
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK------WTAPEALN 288
Query: 234 TGQLTKKSDVYSFGVVLLELIT 255
G+ + +SDV+SFG++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G YG VY G + VAVK L + EF E ++ ++H NLV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+M G+L ++ + ++E + + +A + +EYL I+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLE---KKNFIH 153
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD A N L+ K++DFGL++L TG + APE + KS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 242 DVYSFGVVLLELIT 255
DV++FGV+L E+ T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG G V ++ VAVK +D + E+ + ++ H+N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+G+ + L E+ S G L F + PD EP + G+ YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL---FDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGIG-- 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ +RD K N+LLD N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 -TKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ DV+S G+VL ++ G D +PS+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD--QPSD 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V+KG E++ V +K + D+SG Q + +L + + H ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLD----LPPDQEPLDWFTRMKIAGGAAKGLEYL 171
L+G C G LV +++ GSL +H L P Q L+W ++ AKG+ YL
Sbjct: 98 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQI------AKGMYYL 149
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ +++R+ A N+LL + +++DFG+A L P K + + + A E
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
G+ T +SDV+S+GV + EL+T
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ G M +
Sbjct: 199 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ G M +
Sbjct: 176 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 97 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 237
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 99 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAE--VLMLSLVQHQNLVNLI- 117
L+G G YG VYKG ++ ++ VAVK + Q F E + + L++H N+ I
Sbjct: 20 LIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 118 ---GYCADGD-QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
ADG + +LV E+ NGSL +L L DW + ++A +GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 173 -----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLA------KLGPTGGKDHVSTRVM 221
D P + +RD + N+L+ + +SDFGL+ +L G +D+ + +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 222 GTYGYCAPEYAMTGQLT--------KKSDVYSFGVVLLEL 253
GT Y APE + G + K+ D+Y+ G++ E+
Sbjct: 190 GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ +V AVK + + G+ F AE ++ +QH LV L
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ ++ EFM+ GSL + ++PL K+ +A+ E + + I+
Sbjct: 248 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQRNYIH 301
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD +A+NIL+ A K++DFGLA++G + APE G T KS
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVG-----------AKFPIKWTAPEAINFGSFTIKS 350
Query: 242 DVYSFGVVLLELIT 255
DV+SFG++L+E++T
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 88 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 219 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 61 LVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V G ++ + VA+K L ++G ++ R+F +E ++ H N+++
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G +++ E+M NGSL + FL + FT +++ G G G++YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGR-----FTVIQLVGMLRGIGSGMKYLS 148
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYCAPEY 231
D++ ++RD A NIL+++ K+SDFG++++ + +TR + APE
Sbjct: 149 DMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
+ T SDV+S+G+V+ E+++
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 92 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + ++VAVK++D Q F EV+++ QH+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM---KIAGGAAKGLEYLHDVADPP 178
GD+ +V EF+ G+L + + TRM +IA L+ L +
Sbjct: 142 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYGYCAPEYAMTGQ 236
VI+RD K+ +ILL + KLSDFG V R ++GT + APE
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G++++E++ G N P + ++
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ +V AVK + + G+ F AE ++ +QH LV L
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ ++ EFM+ GSL + ++PL K+ +A+ E + + I+
Sbjct: 81 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQRNYIH 134
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD +A+NIL+ A K++DFGLA++ +D+ T G + APE G T
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 239 KKSDVYSFGVVLLELIT 255
KSDV+SFG++L+E++T
Sbjct: 191 IKSDVWSFGILLMEIVT 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + R G +F E ++ + H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV+EFM +G L ++ L + T + + +G+ YL + + VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + R G +F E ++ + H LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV+EFM +G L ++ L + T + + +G+ YL + VI+
Sbjct: 76 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 52 ATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLML 105
T + NP+ +G+G +G+VYK + + A K +D + ++ E+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H N+V L+ + ++ EF + G+++ L+L + PL +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
L YLH D +I+RD KA NIL + + KL+DFG++ + S +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPY 200
Query: 226 YCAPEYAMTGQLTK------KSDVYSFGVVLLEL 253
+ APE M + +K K+DV+S G+ L+E+
Sbjct: 201 WMAPEVVMC-ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 61 LVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V G ++ + VA+K L ++G ++ R+F +E ++ H N+++
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G +++ E+M NGSL+ FL + FT +++ G G G++YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLD-AFLRKNDGR-----FTVIQLVGMLRGIGSGMKYLS 133
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYCAPEY 231
D++ ++RD A NIL+++ K+SDFG++++ + +TR + APE
Sbjct: 134 DMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
+ T SDV+S+G+V+ E+++
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 61 LVGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G V G ++ + VA+K L ++G ++ R+F +E ++ H N+++
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYLH 172
L G +++ E+M NGSL + FL + FT +++ G G G++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGR-----FTVIQLVGMLRGIGSGMKYLS 127
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYCAPEY 231
D++ ++RD A NIL+++ K+SDFG++++ + +TR + APE
Sbjct: 128 DMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
+ T SDV+S+G+V+ E+++
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + R G +F E ++ + H LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV+EFM +G L ++ L + T + + +G+ YL + VI+
Sbjct: 71 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S + HQN+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + R G +F E ++ + H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV+EFM +G L ++ L + T + + +G+ YL + VI+
Sbjct: 73 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 52 ATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLML 105
T + NP+ +G+G +G+VYK + + A K +D + ++ E+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H N+V L+ + ++ EF + G+++ L+L + PL +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
L YLH D +I+RD KA NIL + + KL+DFG++ + S +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPY 200
Query: 226 YCAPEYAMTGQLTK------KSDVYSFGVVLLEL 253
+ APE M + +K K+DV+S G+ L+E+
Sbjct: 201 WMAPEVVMC-ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S + HQN+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 52 ATENFNPDC---LVGE-GGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
T + NP+ ++GE G +G+VYK + + A K +D + ++ E+ +L+
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
H N+V L+ + ++ EF + G+++ L+L + PL +
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDA 120
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGTYG 225
L YLH D +I+RD KA NIL + + KL+DFG++ + + R +GT
Sbjct: 121 LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPY 174
Query: 226 YCAPEYAMTGQLTK------KSDVYSFGVVLLEL 253
+ APE M + +K K+DV+S G+ L+E+
Sbjct: 175 WMAPEVVMC-ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 114/275 (41%), Gaps = 32/275 (11%)
Query: 50 ADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLV 108
D E F +G+G +G VYKG +VVA+K +D + E E+ +LS
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
+ G + ++ E++ GS LDL PL+ I KGL
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSA----LDLL-KPGPLEETYIATILREILKGL 129
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+YLH I+RD KA+N+LL + + KL+DFG+A G +GT + A
Sbjct: 130 DYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMA 184
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMM 288
PE K+D++S G+ +EL G + P L+ P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP----------- 233
Query: 289 ADPLLEGQY--PRKGLYQALAVAGMCLQEDADSRP 321
P LEGQ+ P K +A CL +D RP
Sbjct: 234 --PTLEGQHSKPFKEFVEA------CLNKDPRFRP 260
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 53 TENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLV- 108
E+F ++G+G +G+V+ + +Q A+K L + + E +LSL
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
+H L ++ + V E+++ G L H D A GL
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGL 132
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
++LH ++YRD K NILLD + + K++DFG+ K G D + GT Y A
Sbjct: 133 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--DAKTNEFCGTPDYIA 187
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
PE + + D +SFGV+L E++ G+S
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + VAVK++D Q F EV+++ H N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
GD+ +V EF+ G+L + ++E + + + L YLH+ VI+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQG---VIH 164
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ +ILL ++ KLSDFG A++ K ++GT + APE +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWMAPEVISRLPYGTE 221
Query: 241 SDVYSFGVVLLELITGRSAIDNSRP 265
D++S G++++E+I G N P
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPP 246
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 50 ADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLV 108
AD E F +G+G +G V+KG +VVA+K +D + E E+ +LS
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
+ G + ++ E++ GS LDL + PLD I KGL
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLL-EPGPLDETQIATILREILKGL 132
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+YLH I+RD KA+N+LL KL+DFG+A G +GT + A
Sbjct: 133 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMA 187
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMM 288
PE K+D++S G+ +EL G P + L+ P
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------- 236
Query: 289 ADPLLEGQY--PRKGLYQALAVAGMCLQEDADSRP 321
P LEG Y P K +A CL ++ RP
Sbjct: 237 --PTLEGNYSKPLKEFVEA------CLNKEPSFRP 263
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 158 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 158 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 185 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ +V AVK + + G+ F AE ++ +QH LV L
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ ++ EFM+ GSL + ++PL K+ +A+ E + + I+
Sbjct: 254 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQRNYIH 307
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD +A+NIL+ A K++DFGLA++ +D+ T G + APE G T
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 239 KKSDVYSFGVVLLELIT 255
KSDV+SFG++L+E++T
Sbjct: 364 IKSDVWSFGILLMEIVT 380
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 175 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 165 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 150 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 45/294 (15%)
Query: 57 NPDCLVGEGGYGRVYKGYIEAVDQV-----VAVKQLDR-SGNQGSREFFAEVLMLSLVQH 110
+ D ++G+G +G VY G E +DQ A+K L R + Q F E L++ + H
Sbjct: 24 HSDRVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 111 QNLVNLIGYC--ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG--AAK 166
N++ LIG +G +L+ +M +G L P + P + I+ G A+
Sbjct: 82 PNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRS--PQRNPT---VKDLISFGLQVAR 135
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK----LGPTGGKDHVSTRVMG 222
G+EYL A+ ++RD A N +LD F K++DFGLA+ + H R+
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL-- 190
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ A E T + T KSDV+SFGV+L EL+T G + P D
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF--------------D 236
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSS 335
F L + +Y LYQ V C + D RP +V +E + S
Sbjct: 237 LTHFLAQGRRLPQPEYCPDSLYQ---VMQQCWEADPAVRPTFRVLVGEVEQIVS 287
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 52 ATENFNPDCL------VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLML 105
T + NP+ +G+G +G+VYK + + A K +D + ++ E+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H N+V L+ + ++ EF + G+++ L+L + PL +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--VMGT 223
L YLH D +I+RD KA NIL + + KL+DFG++ + R +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGT 198
Query: 224 YGYCAPEYAMTGQLTK------KSDVYSFGVVLLEL 253
+ APE M + +K K+DV+S G+ L+E+
Sbjct: 199 PYWMAPEVVMC-ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 62 VGEGGYGRVYKGYIEA-----VDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+GE +G+VYKG++ Q VA+K L D++ EF E ++ + +QH N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQ---------------EPLDWFTRMKI 160
L+G +++ + S+G L + P EP D+ + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VHL 150
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A G+EYL + V+++D N+L+ + N K+SD GL + +
Sbjct: 151 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ + APE M G+ + SD++S+GVVL E+ +
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + + G+ +F E ++ + H LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV+EFM +G L ++ L + T + + +G+ YL + VI+
Sbjct: 93 EQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE T +SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 135
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 118/280 (42%), Gaps = 34/280 (12%)
Query: 46 YQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLM 104
Y + D E F +G+G +G V+KG +VVA+K +D + E E+ +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 105 LSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGA 164
LS + G + ++ E++ GS LDL + PLD I
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLL-EPGPLDETQIATILREI 133
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGT 223
KGL+YLH I+RD KA+N+LL KL+DFG+A +L T K + +GT
Sbjct: 134 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT---FVGT 187
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
+ APE K+D++S G+ +EL G P + L+ P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------ 241
Query: 284 KFTMMADPLLEGQY--PRKGLYQALAVAGMCLQEDADSRP 321
P LEG Y P K +A CL ++ RP
Sbjct: 242 -------PTLEGNYSKPLKEFVEA------CLNKEPSFRP 268
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 53 TENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLV- 108
E+F ++G+G +G+V+ + +Q A+K L + + E +LSL
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
+H L ++ + V E+++ G L H D A GL
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGL 131
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
++LH ++YRD K NILLD + + K++DFG+ K G D + GT Y A
Sbjct: 132 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--DAKTNXFCGTPDYIA 186
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
PE + + D +SFGV+L E++ G+S
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 92 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 144
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 145 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 138
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 139 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 32/274 (11%)
Query: 51 DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQ 109
D E F +G+G +G V+KG +VVA+K +D + E E+ +LS
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
+ G + ++ E++ GS LDL + PLD I KGL+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLL-EPGPLDETQIATILREILKGLD 118
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
YLH I+RD KA+N+LL KL+DFG+A G +GT + AP
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAP 173
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMA 289
E K+D++S G+ +EL G P + L+ P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------ 221
Query: 290 DPLLEGQY--PRKGLYQALAVAGMCLQEDADSRP 321
P LEG Y P K +A CL ++ RP
Sbjct: 222 -PTLEGNYSKPLKEFVEA------CLNKEPSFRP 248
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 135
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 136 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 116/275 (42%), Gaps = 34/275 (12%)
Query: 51 DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQ 109
D E F +G+G +G V+KG +VVA+K +D + E E+ +LS
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
+ G + ++ E++ GS LDL + PLD I KGL+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLL-EPGPLDETQIATILREILKGLD 118
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCA 228
YLH I+RD KA+N+LL KL+DFG+A +L T K + +GT + A
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT---FVGTPFWMA 172
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMM 288
PE K+D++S G+ +EL G P + L+ P
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------- 221
Query: 289 ADPLLEGQY--PRKGLYQALAVAGMCLQEDADSRP 321
P LEG Y P K +A CL ++ RP
Sbjct: 222 --PTLEGNYSKPLKEFVEA------CLNKEPSFRP 248
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 62 VGEGGYGRVYKGYIEA-----VDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+GE +G+VYKG++ Q VA+K L D++ EF E ++ + +QH N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQ---------------EPLDWFTRMKI 160
L+G +++ + S+G L + P EP D+ + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VHL 133
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A G+EYL + V+++D N+L+ + N K+SD GL + +
Sbjct: 134 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ + APE M G+ + SD++S+GVVL E+ +
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G G +G VY+G + + VAVK L + Q +F E L++S HQN+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDL---PPDQEPLDWFTRMKIAGGAAKGLEYLH 172
IG R ++ E M+ G L++ + P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 173 DVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELIT 255
PE M G T K+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 76 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 128
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 129 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY D+V A+K + R G +F E ++ + H LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+ LV EFM +G L ++ L + T + + +G+ YL + VI+
Sbjct: 74 EQAPICLVTEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L+ K+SDFG+ + D T GT + +PE + +
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSE 267
KSDV+SFGV++ E+ + G+ +N SE
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 85 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 33/258 (12%)
Query: 26 RIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCL-----VGEGGYGRVYKGYIEAVDQ 80
RI + V +Y+ D F D L +GEG +G+V +D+
Sbjct: 48 RITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDK 107
Query: 81 -------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQNLVNLIGYCADGDQRILVYE 131
VAVK L D + + + +E+ M+ ++ +H+N++NL+G C ++ E
Sbjct: 108 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 167
Query: 132 FMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGGA---AKGLEYLHDVADPPV 179
+ S G+L + PP E P + T + A+G+EYL A
Sbjct: 168 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKC 224
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG--TYGYCAPEYAMTGQL 237
I+RD A N+L+ K++DFGLA+ D+ G + APE
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
Query: 238 TKKSDVYSFGVVLLELIT 255
T +SDV+SFGV++ E+ T
Sbjct: 283 THQSDVWSFGVLMWEIFT 300
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 88 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 140
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 141 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 138 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLML-SLVQHQNLVNLIGY 119
LVG G YG+VYKG Q+ A+K +D +G++ E E+ ML H+N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 120 CAD------GDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
DQ LV EF GS+ + + + +W I +GL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQ 147
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
VI+RD K N+LL KL DFG+ A+L T G+ + +GT + APE
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPYWMAPEVI 201
Query: 233 MTGQLTK-----KSDVYSFGVVLLELITGRSAIDNSRP 265
+ KSD++S G+ +E+ G + + P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K L + + + ++E E +++ V +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + LV + M G L +H + Q+ L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
DV +++RD A N+L+ + + K++DFGLA+L ++ + + A E
Sbjct: 137 DVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + T +SDV+S+GV + EL+T
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G + F E ++ +QH LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM-KIAGGAAKGLEYLHDVADPPVI 180
+ ++ E+M+ GSL + L D+ ++ + A+G+ Y+ I
Sbjct: 79 REEPIYIITEYMAKGSLLDF---LKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYI 132
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+N+L+ K++DFGLA++ +D+ T G + APE G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVI----EDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 238 TKKSDVYSFGVVLLELIT 255
T KSDV+SFG++L E++T
Sbjct: 189 TIKSDVWSFGILLYEIVT 206
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 107 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 159
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 160 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG YG VYK + Q+VA+KQ+ + +E E+ ++ ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ GS+ + + L D I KGLEYLH + I+
Sbjct: 95 KNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIA--TILQSTLKGLEYLHFMRK---IH 148
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKS 241
RD KA NILL+ E + KL+DFG+A G V+GT + APE +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 242 DVYSFGVVLLELITGRSAIDNSRP 265
D++S G+ +E+ G+ + P
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHP 230
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 49 LADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS---REFFAEVLML 105
+ + E+F L+G+G + VY+ VA+K +D+ + + EV +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
++H +++ L Y D + LV E NG + + L +P
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY---LKNRVKPFSENEARHFMHQII 122
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
G+ YLH +++RD SN+LL N K++DFGLA + H + + GT
Sbjct: 123 TGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWA 275
Y +PE A +SDV+S G + L+ GR D N V A
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V+ GY +V AVK L + G + F E ++ +QH LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM-KIAGGAAKGLEYLHDVADPPVI 180
+ ++ EFM+ GSL + L D+ ++ + A+G+ Y+ I
Sbjct: 78 KEEPIYIITEFMAKGSLLDF---LKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYI 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQL 237
+RD +A+N+L+ K++DFGLA++ +D+ T G + APE G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARV----IEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 238 TKKSDVYSFGVVLLELIT 255
T KS+V+SFG++L E++T
Sbjct: 188 TIKSNVWSFGILLYEIVT 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHF-----LDL-PPDQEPLDWFTRMKIAGGAAKG 167
VNL+G C G +++ E+ G L N DL D PL+ + + A+G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
+ +L A I+RD A N+LL K+ DFGLA+ V +
Sbjct: 173 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T +SDV+S+G++L E+ +
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 23/258 (8%)
Query: 19 RRSSKQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYI--- 75
RR ++R + + G+A PN + L + F ++G G +G VYKG
Sbjct: 19 RRLLQERELVEPLTPSGEA---PNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPE 73
Query: 76 -EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFM 133
E V VA+ +L + + + ++E E +++ V + ++ L+G C + L+ + M
Sbjct: 74 GEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLM 132
Query: 134 SNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNIL 190
G L ++ + + Q L+W ++ AKG+ YL D +++RD A N+L
Sbjct: 133 PFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVL 183
Query: 191 LDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVL 250
+ + K++DFGLAKL K++ + + A E + T +SDV+S+GV +
Sbjct: 184 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 243
Query: 251 LELITGRSAIDNSRPSEE 268
EL+T S + P+ E
Sbjct: 244 WELMTFGSKPYDGIPASE 261
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHF-----LDL-PPDQEPLDWFTRMKIAGGAAKG 167
VNL+G C G +++ E+ G L N DL D PL+ + + A+G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
+ +L A I+RD A N+LL K+ DFGLA+ V +
Sbjct: 165 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T +SDV+S+G++L E+ +
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 34 FGKAKKTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ 86
G K N F E+ D+T +N P +G G G V Y +D+ VA+K+
Sbjct: 1 MGSKSKVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKK 57
Query: 87 LDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSL 138
L R ++ + E++++ V H+N+++L+ + LV E M
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 117
Query: 139 ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK 198
+ ++L D E + + + G +++LH +I+RD K SNI++ ++ K
Sbjct: 118 QVIQMEL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLK 167
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI---- 254
+ DFGLA+ T G + T + T Y APE + + D++S G ++ E++
Sbjct: 168 ILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
Query: 255 --TGRSAIDNSRPSEEQ 269
GR ID EQ
Sbjct: 225 LFPGRDYIDQWNKVIEQ 241
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP------------DQEPLDWFTRMKI 160
++NL+G C ++ E+ S G+L + P +E L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 204
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 209
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 206
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ +++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF---------LDLPPDQEPLDWFTRMKIAGG 163
++NL+G C ++ E+ S G+L + P P + + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQLDRSGNQGS-REFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L + + +E+ M+ ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPP-----------DQEPLDWFTRMKI 160
++NL+G C ++ E+ S G+L + PP +E L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A A+G+EYL A I+RD A N+L+ + K++DFGLA+ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 221 MGTYG-----YCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
T G + APE T +SDV+SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQ 111
E +N C++G+G +G V K Q AVK ++++ N+ + EV +L + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
N++ L D +V E + G L + + ++ +I G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYM 137
Query: 172 HDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
H +++RD K NILL++ + + K+ DFGL+ T KD + GT Y
Sbjct: 138 H---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYY 189
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
APE + G +K DV+S GV+L L++G
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 43/227 (18%)
Query: 62 VGEGGYGRVYKGYIEAV-----DQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVN 115
+GEG +GRV++ + +VAVK L + + +F E +++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFL--------------DL-------PPDQEPLDW 154
L+G CA G L++E+M+ G L N FL DL P PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------LG 208
++ IA A G+ YL ++ ++RD N L+ K++DFGL++
Sbjct: 174 AEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 209 PTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G D + R M PE + T +SDV+++GVVL E+ +
Sbjct: 231 KADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ A+G+ YL
Sbjct: 79 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYLE 131
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 132 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQ 111
E +N C++G+G +G V K Q AVK ++++ N+ + EV +L + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
N++ L D +V E + G L + + ++ +I G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYM 137
Query: 172 HDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
H +++RD K NILL++ + + K+ DFGL+ T KD + GT Y
Sbjct: 138 H---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYY 189
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
APE + G +K DV+S GV+L L++G
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQ 111
E +N C++G+G +G V K Q AVK ++++ N+ + EV +L + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
N++ L D +V E + G L D ++ +I G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 172 HDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
H +++RD K NILL++ + + K+ DFGL+ T KD + GT Y
Sbjct: 138 H---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYY 189
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
APE + G +K DV+S GV+L L++G
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIG-YC 120
+G+G +G+VYK + + A K ++ + ++ E+ +L+ H +V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
DG I++ EF G+++ L+L T +I + LE L+ + +I
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 181 YRDFKASNILLDAEFNPKLSDFGLA--KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
+RD KA N+L+ E + +L+DFG++ L +D +GT + APE M +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPEVVMCETMK 195
Query: 239 K-----KSDVYSFGVVLLEL 253
K+D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 23 KQRRIAAEIRKFGKAK-KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGY 74
KQ ++ + + +K K N F E+ D+T +N P +G G G V Y
Sbjct: 26 KQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAY 82
Query: 75 IEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQR 126
+D+ VA+K+L R ++ + E++++ V H+N+++L+ +
Sbjct: 83 DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 127 ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKA 186
LV E M + ++L D E + + + G +++LH +I+RD K
Sbjct: 143 YLVMELMDANLCQVIQMEL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKP 192
Query: 187 SNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
SNI++ ++ K+ DFGLA+ T G + T + T Y APE + + D++S
Sbjct: 193 SNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
Query: 247 GVVLLELI------TGRSAIDNSRPSEEQ 269
G ++ E++ GR ID EQ
Sbjct: 250 GCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVVAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA-----DGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ +V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLVG-----IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S GV++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIG-YC 120
+G+G +G+VYK + + A K ++ + ++ E+ +L+ H +V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
DG I++ EF G+++ L+L T +I + LE L+ + +I
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 181 YRDFKASNILLDAEFNPKLSDFGLA--KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
+RD KA N+L+ E + +L+DFG++ L +D +GT + APE M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPEVVMCETMK 187
Query: 239 K-----KSDVYSFGVVLLEL 253
K+D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 138
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 139 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++ G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 89 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++ G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++ G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFGLAKL K++ + + A E
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 23 KQRRIAAEIRKFGKAK-KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGY 74
KQ ++ + + +K K N F E+ D+T +N P +G G G V Y
Sbjct: 26 KQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAY 82
Query: 75 IEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQR 126
+D+ VA+K+L R ++ + E++++ V H+N+++L+ +
Sbjct: 83 DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 127 ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKA 186
LV E M + ++L D E + + + G +++LH +I+RD K
Sbjct: 143 YLVMELMDANLCQVIQMEL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKP 192
Query: 187 SNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
SNI++ ++ K+ DFGLA+ T G + T + T Y APE + + D++S
Sbjct: 193 SNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
Query: 247 GVVLLELI------TGRSAIDNSRPSEEQ 269
G ++ E++ GR ID EQ
Sbjct: 250 GCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEVLMLSLVQHQ 111
+F+ ++G GG+G VY ++ A+K LD+ QG E +MLSLV
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 112 N--LVNLIGYCADG-DQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI-AGGAAKG 167
+ + + Y D+ + + M+ G L H Q + M+ A G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LE++H+ V+YRD K +NILLD + ++SD GLA + K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 228 APEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
APE G S D +S G +L +L+ G S + ++ +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEVLMLSLVQHQ 111
+F+ ++G GG+G VY ++ A+K LD+ QG E +MLSLV
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 112 N--LVNLIGYCADG-DQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI-AGGAAKG 167
+ + + Y D+ + + M+ G L H Q + M+ A G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LE++H+ V+YRD K +NILLD + ++SD GLA + K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 228 APEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
APE G S D +S G +L +L+ G S + ++ +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEVLMLSLVQHQ 111
+F+ ++G GG+G VY ++ A+K LD+ QG E +MLSLV
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 112 N--LVNLIGYCADG-DQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI-AGGAAKG 167
+ + + Y D+ + + M+ G L H Q + M+ A G
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 303
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LE++H+ V+YRD K +NILLD + ++SD GLA + K H S +GT+GY
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 356
Query: 228 APEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
APE G S D +S G +L +L+ G S + ++ +
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 49 LADATE--NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-----SGNQGSREFFAE 101
LAD N+ +GEG +G+V Y Q VA+K +++ S QG E E
Sbjct: 6 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--RE 63
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMK 159
+ L L++H +++ L D+ I+V E+ N L ++ + D +QE +F ++
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI- 121
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
+EY H +++RD K N+LLD N K++DFGL+ + G S
Sbjct: 122 -----ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC- 172
Query: 220 VMGTYGYCAPEYAMTGQLTK--KSDVYSFGVVLLELITGRSAIDN 262
G+ Y APE ++G+L + DV+S GV+L ++ R D+
Sbjct: 173 --GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 137 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 135 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEVLMLSLVQHQ 111
+F+ ++G GG+G VY ++ A+K LD+ QG E +MLSLV
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 112 N--LVNLIGYCADG-DQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI-AGGAAKG 167
+ + + Y D+ + + M+ G L H Q + M+ A G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LE++H+ V+YRD K +NILLD + ++SD GLA + K H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 228 APEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
APE G S D +S G +L +L+ G S + ++ +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 49 LADATE--NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-----SGNQGSREFFAE 101
LAD N+ +GEG +G+V Y Q VA+K +++ S QG E E
Sbjct: 7 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--RE 64
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMK 159
+ L L++H +++ L D+ I+V E+ N L ++ + D +QE +F ++
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI- 122
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
+EY H +++RD K N+LLD N K++DFGL+ + G S
Sbjct: 123 -----ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC- 173
Query: 220 VMGTYGYCAPEYAMTGQLTK--KSDVYSFGVVLLELITGRSAIDN 262
G+ Y APE ++G+L + DV+S GV+L ++ R D+
Sbjct: 174 --GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
+++L+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 61 LVGEGGYGRVYKGYI----EAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G G +G VYKG E V VA+K+L + + + ++E E +++ V + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRMKIAGGAAKGLEYLH 172
L+G C + L+ + M G L ++ + + Q L+W ++ AKG+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D +++RD A N+L+ + K++DFG AKL K++ + + A E
Sbjct: 142 DRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 233 MTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
+ T +SDV+S+GV + EL+T S + P+ E
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 116/285 (40%), Gaps = 35/285 (12%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLM 104
+YQ + EN +G G G+V+K V+AVKQ+ RSGN+ + L
Sbjct: 19 RYQAEINDLENLGE---MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD 75
Query: 105 LSLVQHQN--LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+ L H +V G + E M G+ P +M +A
Sbjct: 76 VVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVA- 132
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVM 221
K L YL + VI+RD K SNILLD KL DFG++ +L KD R
Sbjct: 133 -IVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD----RSA 185
Query: 222 GTYGYCAPEYAMTGQLTK-----KSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAK 276
G Y APE TK ++DV+S G+ L+EL TG+ N + E ++T
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLT--- 240
Query: 277 PLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRP 321
K PLL G G +Q+ CL +D RP
Sbjct: 241 -------KVLQEEPPLLPGHMGFSGDFQSFVKD--CLTKDHRKRP 276
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ--VI 119
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 6 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 122
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 123 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 173 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 230 DYIDQWNKVIEQ 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 4 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 60
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 61 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 120
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 121 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 171 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 228 DYIDQWNKVIEQ 239
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGSRE-FFAEVLMLS- 106
EN ++G G +G+V + + VAVK L + RE +E+ M++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF-------------------LDLPP 147
L H+N+VNL+G C L++E+ G L N+ L+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 148 DQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL 207
D L + + A AKG+E+L ++RD A N+L+ K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 208 GPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ V + APE G T KSDV+S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++ L+G C ++ E+ S G+L + PP E P + T +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ +V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLVG-----IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S GV++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ--VI 119
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 120 QMELDHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 49 LADATE--NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-----SGNQGSREFFAE 101
LAD N+ +GEG +G+V Y Q VA+K +++ S QG E E
Sbjct: 1 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--RE 58
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMK 159
+ L L++H +++ L D+ I+V E+ N L ++ + D +QE +F ++
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI- 116
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
+EY H +++RD K N+LLD N K++DFGL+ + G S
Sbjct: 117 -----ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC- 167
Query: 220 VMGTYGYCAPEYAMTGQLTK--KSDVYSFGVVLLELITGRSAIDN 262
G+ Y APE ++G+L + DV+S GV+L ++ R D+
Sbjct: 168 --GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 35/311 (11%)
Query: 34 FGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDR 89
G P VF + L + +GEG +G+V Y + ++VAVK L
Sbjct: 1 MGSPASDPTVFHKRYLKKIRD-------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 53
Query: 90 -SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCAD-GDQRI-LVYEFMSNGSLENHFLDLP 146
G Q + E+ +L + H++++ G C D G++ + LV E++ GSL ++ LP
Sbjct: 54 DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY---LP 110
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
+ + + A +G+ YLH I+R+ A N+LLD + K+ DFGLAK
Sbjct: 111 --RHSIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 207 LGPTGGKDHVSTRVMG---TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNS 263
P G ++ R G + Y APE + SDV+SFGV L EL+T + S
Sbjct: 166 AVPE-GHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQS 222
Query: 264 RPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ---YPRKGLYQALAVAGMCLQEDADSR 320
P++ L+ A+ + + + L G+ P K + + C + +A R
Sbjct: 223 PPTKFLELIGIAQ----GQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFR 278
Query: 321 PFMVDVVTALE 331
P +++ L+
Sbjct: 279 PTFENLIPILK 289
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G + L +Q + T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 175
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS------GNQGSREFFAEVLMLSLVQHQNLV 114
++G GG+G V+ ++A ++ A K+L++ G QG+ E +L+ V + +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD----QEPLDWFTRMKIAGGAAKGLEY 170
+L LV M+ G + H ++ D QEP F +I GLE+
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEH 304
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA---KLGPTGGKDHVSTRVMGTYGYC 227
LH +IYRD K N+LLD + N ++SD GLA K G T K + GT G+
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFM 356
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITGR 257
APE + + D ++ GV L E+I R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS------GNQGSREFFAEVLMLSLVQHQNLV 114
++G GG+G V+ ++A ++ A K+L++ G QG+ E +L+ V + +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD----QEPLDWFTRMKIAGGAAKGLEY 170
+L LV M+ G + H ++ D QEP F +I GLE+
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEH 304
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA---KLGPTGGKDHVSTRVMGTYGYC 227
LH +IYRD K N+LLD + N ++SD GLA K G T K + GT G+
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFM 356
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITGR 257
APE + + D ++ GV L E+I R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ + S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLXG-----IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 124/291 (42%), Gaps = 44/291 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTR---MKIAGG 163
NL+G C G +++ EF G+L N F+ P+ D+ T + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR---V 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDA 210
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 261
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 262 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 5 KVDNQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLXG-----IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS------GNQGSREFFAEVLMLSLVQHQNLV 114
++G GG+G V+ ++A ++ A K+L++ G QG+ E +L+ V + +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD----QEPLDWFTRMKIAGGAAKGLEY 170
+L LV M+ G + H ++ D QEP F +I GLE+
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEH 304
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA---KLGPTGGKDHVSTRVMGTYGYC 227
LH +IYRD K N+LLD + N ++SD GLA K G T K + GT G+
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFM 356
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITGR 257
APE + + D ++ GV L E+I R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS------GNQGSREFFAEVLMLSLVQHQNLV 114
++G GG+G V+ ++A ++ A K+L++ G QG+ E +L+ V + +V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD----QEPLDWFTRMKIAGGAAKGLEY 170
+L LV M+ G + H ++ D QEP F +I GLE+
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGLEH 304
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA---KLGPTGGKDHVSTRVMGTYGYC 227
LH +IYRD K N+LLD + N ++SD GLA K G T K + GT G+
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFM 356
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITGR 257
APE + + D ++ GV L E+I R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR-----SGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y Q VA+K +++ S QG E E+ L L++H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
D+ I+V E+ N L ++ + D +QE +F ++ +EY H
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYCHR- 121
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT 234
+++RD K N+LLD N K++DFGL+ + G S G+ Y APE ++
Sbjct: 122 --HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VIS 175
Query: 235 GQLTK--KSDVYSFGVVLLELITGRSAIDN 262
G+L + DV+S GV+L ++ R D+
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ +D + GT
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTL 196
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 23/242 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+GEG G V + + VAVK +D Q F EV+++ QH N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
G++ ++ EF+ G+L + + ++E + + + L YLH VI+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG---VIH 164
Query: 182 RDFKASNILLDAEFNPKLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKK 240
RD K+ +ILL + KLSDFG A++ K ++GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKXLVGTPYWMAPEVISRSLYATE 221
Query: 241 SDVYSFGVVLLELITGR---------SAIDNSRPSEEQNLVTWAK--PLLRDKKKFTMMA 289
D++S G++++E++ G A+ R S L K P+LRD + ++
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 290 DP 291
DP
Sbjct: 282 DP 283
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 196
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQ 111
+FN ++G+G +G+V + +++ A+K L + + E +L+L+
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 112 NLVNLIGYCADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
+ + C R+ V E+++ G L H + +EP F +I+ GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS----IGLFF 135
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR-VMGTYGYCAP 229
LH +IYRD K N++LD+E + K++DFG+ K D V+TR GT Y AP
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAP 189
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
E K D +++GV+L E++ G+ D E
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ +D + GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTL 171
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 80
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 134
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 135 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 187
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 61 LVGEGGYGRVYKGYIEAVDQV---VAVK--QLDRSGNQGSREFFAEVLMLSLVQHQNLVN 115
++GEG +G V +G ++ D VAVK +LD S + EF +E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 116 LIGYCADGDQR-----ILVYEFMSNGSLENHF----LDLPPDQEPLDWFTRMKIAGGAAK 166
L+G C + + +++ FM G L + L+ P PL T +K A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIAL 158
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
G+EYL ++ ++RD A N +L + ++DFGL+K +G +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
A E T KSDV++FGV + E+ T
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 35/311 (11%)
Query: 34 FGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRV----YKGYIEAVDQVVAVKQLDR 89
G P VF + L + +GEG +G+V Y + ++VAVK L
Sbjct: 1 MGSPASDPTVFHKRYLKKIRD-------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 53
Query: 90 -SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCAD-GDQRI-LVYEFMSNGSLENHFLDLP 146
G Q + E+ +L + H++++ G C D G++ + LV E++ GSL ++ LP
Sbjct: 54 DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY---LP 110
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
+ + + A +G+ YLH I+R+ A N+LLD + K+ DFGLAK
Sbjct: 111 --RHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 207 LGPTGGKDHVSTRVMG---TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNS 263
P G ++ R G + Y APE + SDV+SFGV L EL+T + S
Sbjct: 166 AVPE-GHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQS 222
Query: 264 RPSEEQNLVTWAKPLLRDKKKFTMMADPLLEGQ---YPRKGLYQALAVAGMCLQEDADSR 320
P++ L+ A+ + + + L G+ P K + + C + +A R
Sbjct: 223 PPTKFLELIGIAQ----GQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFR 278
Query: 321 PFMVDVVTALE 331
P +++ L+
Sbjct: 279 PTFENLIPILK 289
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 54 ENFNPDC-----LVGEGGYGRVY---KGYIEAVDQVVAVKQLDRS----GNQGSREFFAE 101
E P+C ++G+GGYG+V+ K ++ A+K L ++ + + AE
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRM 158
+L V+H +V+LI G + L+ E++S G L F+ L + E F
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+I+ L +LH +IYRD K NI+L+ + + KL+DFGL K G V+
Sbjct: 129 EIS----MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTH 179
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GT Y APE M + D +S G ++ +++TG
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 54 ENFNPDC-----LVGEGGYGRVY---KGYIEAVDQVVAVKQLDRS----GNQGSREFFAE 101
E P+C ++G+GGYG+V+ K ++ A+K L ++ + + AE
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD---QEPLDWFTRM 158
+L V+H +V+LI G + L+ E++S G L F+ L + E F
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA 128
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
+I+ L +LH +IYRD K NI+L+ + + KL+DFGL K G V+
Sbjct: 129 EIS----MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTH 179
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GT Y APE M + D +S G ++ +++TG
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 42 NVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGN 92
N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 57
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLP 146
++ + E++++ V H+N+++L+ + LV E M + ++L
Sbjct: 58 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 116
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 117 -DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGRSAI 260
T G + T + T Y APE + + D++S G ++ E++ GR I
Sbjct: 168 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 261 DNSRPSEEQ 269
D EQ
Sbjct: 225 DQWNKVIEQ 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-------VVAVKQL-DRSGNQGSREFFAEVLMLSLV-QHQN 112
+GEG +G+V +D+ VAVK L D + + + +E+ M+ ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHF-LDLPPDQE--------PLDWFTRMKIAGG 163
++NL+G C ++ + S G+L + PP E P + T +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 164 A---AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
A+G+EYL A I+RD A N+L+ K++DFGLA+ D+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 221 MG--TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
G + APE T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 34 FGKAKKTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ 86
G K N F E+ D+T +N P +G G G V Y +++ VA+K+
Sbjct: 1 MGSRSKRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKK 57
Query: 87 LDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSL 138
L R ++ + E++++ V H+N++ L+ + +V E M
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 117
Query: 139 ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK 198
+ ++L D E + + + G +++LH +I+RD K SNI++ ++ K
Sbjct: 118 QVIQMEL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLK 167
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
+ DFGLA+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 168 ILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 175
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 25/236 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSG-NQGS-REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VA+K +D++ N S ++ F EV ++ ++ H N+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 120 CADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
L+ E+ S G + ++ + ++E F ++ ++Y H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQYCHQ---K 130
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+++RD KA N+LLDA+ N K++DFG + GGK G+ Y APE +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGKKY 187
Query: 238 T-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 188 DGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 237
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G+G YG VY G + +A+K++ ++ S+ E+ + ++H+N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 121 ADGDQRILVYEFMSNGS----LENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
++ + E + GS L + + L +++ + ++T+ + +GL+YLHD
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 142
Query: 177 PPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
+++RD K N+L++ K+SDFG +K G + + GT Y APE G
Sbjct: 143 --IVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 236 Q--LTKKSDVYSFGVVLLELITGR 257
K +D++S G ++E+ TG+
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 42 NVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGN 92
N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 58
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLP 146
++ + E++++ V H+N+++L+ + LV E M + ++L
Sbjct: 59 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 117
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGRSAI 260
T G + T + T Y APE + + D++S G ++ E++ GR I
Sbjct: 169 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 261 DNSRPSEEQ 269
D EQ
Sbjct: 226 DQWNKVIEQ 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 42 NVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGN 92
N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 2 NQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 58
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLP 146
++ + E++++ V H+N+++L+ + LV E M + ++L
Sbjct: 59 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL- 117
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGRSAI 260
T G + T + T Y APE + + D++S G ++ E++ GR I
Sbjct: 169 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
Query: 261 DNSRPSEEQ 269
D EQ
Sbjct: 226 DQWNKVIEQ 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 175
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDR-SGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y + ++VAVK L +G Q + E+ +L + H++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 117 IGYCADGDQRIL--VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C D L V E++ GSL ++ LP + + + A +G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDY---LP--RHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM----GTYGYCAPE 230
I+RD A N+LLD + K+ DFGLAK P G H RV + APE
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEXYRVREDGDSPVFWYAPE 207
Query: 231 YAMTGQLTKKSDVYSFGVVLLELIT 255
+ SDV+SFGV L EL+T
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF---FAEVLMLSLVQHQNLVNLIG 118
+G G +G VY +VVA+K++ SG Q + ++ EV L ++H N + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 119 YCADGDQRILVYEFMSNGS---LENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
LV E+ + LE H ++PL + GA +GL YLH
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVH-------KKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT- 234
+I+RD KA NILL KL DFG A + + +GT + APE +
Sbjct: 175 ---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAM 225
Query: 235 --GQLTKKSDVYSFGVVLLELITGRSAIDN 262
GQ K DV+S G+ +EL + + N
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPLFN 255
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF---FAEVLMLSLVQHQNLVNLIG 118
+G G +G VY +VVA+K++ SG Q + ++ EV L ++H N + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 119 YCADGDQRILVYEFM---SNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
LV E+ ++ LE H ++PL + GA +GL YLH
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVH-------KKPLQEVEIAAVTHGALQGLAYLHS-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT- 234
+I+RD KA NILL KL DFG A + + +GT + APE +
Sbjct: 134 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAM 186
Query: 235 --GQLTKKSDVYSFGVVLLELITGRSAIDN 262
GQ K DV+S G+ +EL + + N
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFN 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ +D + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 62
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 116
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 117 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 169
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 25/236 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSG-NQGS-REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VA+K +D++ N S ++ F EV ++ ++ H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 120 CADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
L+ E+ S G + ++ + ++E F ++ ++Y H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQYCHQ---K 133
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+++RD KA N+LLDA+ N K++DFG + GGK G Y APE +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKY 190
Query: 238 T-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 191 DGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAVK +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------GLEYLHD 173
LV E+ S G + ++ + RMK AK ++Y H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+++RD KA N+LLDA+ N K++DFG + G K G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQ 185
Query: 234 TGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ + DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 42 NVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGN 92
N F E+ D+T +N P +G G G V Y +D+ VA+K+L R
Sbjct: 1 NQFYSVEVGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ 57
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLP 146
++ + E++++ V H+N+++L+ + LV E M + ++L
Sbjct: 58 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL- 116
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 117 -DHERMSYLLYQMLXG-----IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI------TGRSAI 260
T G + T + T Y APE + + D++S G ++ E++ GR I
Sbjct: 168 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
Query: 261 DNSRPSEEQ 269
D EQ
Sbjct: 225 DQWNKVIEQ 233
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 62 VGEGGYGRVYKG-------YIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+G+G + +++KG Y + + V +K LD++ S FF M+S + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C GD+ ILV EF+ GSL+ + L ++ ++ ++++A A + +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG------GKDHVSTRVMGTYGYCA 228
+I+ + A NILL E + K + KL G KD + R+ +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI----PWVP 185
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPL--LRDKKKF 285
PE + L +D +SFG L E+ +G KPL L ++K
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGD-----------------KPLSALDSQRKL 228
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSSP 336
D Q P + + C+ + D RP ++ L L +P
Sbjct: 229 QFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAVK +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------GLEYLHD 173
LV E+ S G + ++ + RMK AK ++Y H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+++RD KA N+LLDA+ N K++DFG + G K G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQ 185
Query: 234 TGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ + DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTL 171
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTL 171
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFL----------DLPPDQE----------PLD 153
VNL+G C G +++ E+ G L N FL L P Q+ PL+
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 154 WFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK 213
+ + A+G+ +L A I+RD A N+LL K+ DFGLA+
Sbjct: 157 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 214 DHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G++L E+ +
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTL 175
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 67
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 121
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 122 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 174
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVNLIG 118
+G+G YG V+K +VVAVK++ ++ R F +++ L H+N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 119 YC-ADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
AD D+ + LV+++M + H + EP+ + + K ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYMET---DLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG- 129
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAK-------------LGPTGGKDH------VS 217
+++RD K SNILL+AE + K++DFGL++ L ++ +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 218 TRVMGTYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
T + T Y APE + + + TK D++S G +L E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG---SREFFAEVLMLSLVQHQNLVNLIG 118
+G G +G+V G E VAVK L+R + + E+ L L +H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPP 178
+ +V E++S G L D LD ++ G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
V++RD K N+LLDA N K++DFGL+ + G S G+ Y APE ++G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLY 192
Query: 239 K--KSDVYSFGVVLLELITGRSAIDN 262
+ D++S GV+L L+ G D+
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 60 CLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
++G+G YG VY G + +A+K++ ++ S+ E+ + ++H+N+V +G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 120 CADGDQRILVYEFMSNGS----LENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
++ + E + GS L + + L +++ + ++T+ + +GL+YLHD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ 128
Query: 176 DPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT 234
+++RD K N+L++ K+SDFG +K G + + GT Y APE
Sbjct: 129 ---IVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAPEIIDK 183
Query: 235 GQ--LTKKSDVYSFGVVLLELITGR 257
G K +D++S G ++E+ TG+
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAV+ +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------GLEYLHD 173
LV E+ S G + ++ + RMK AK ++Y H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+++RD KA N+LLDA+ N K++DFG + G K G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQ 185
Query: 234 TGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ + DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 33/247 (13%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG-NQGS-REFFAEVLMLSLVQHQN 112
N+ +G+G + +V + VAVK +D++ N S ++ F EV ++ ++ H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------ 166
+V L LV E+ S G + ++ + RMK AK
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 125
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
++Y H +++RD KA N+LLD + N K++DFG + G K G+ Y
Sbjct: 126 AVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPY 179
Query: 227 CAPEYAMTGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK- 284
APE + + DV+S GV+L L++G S P + QNL + +LR K +
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRI 233
Query: 285 -FTMMAD 290
F M D
Sbjct: 234 PFYMSTD 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDR-SGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y + ++VAVK L G Q + E+ +L + H+++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 117 IGYCAD-GDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C D G++ + LV E++ GSL ++ LP + + + A +G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDY---LP--RHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAPEY 231
I+R A N+LLD + K+ DFGLAK P G ++ R G + Y APE
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWY-APEC 186
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
+ SDV+SFGV L EL+T
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 27/248 (10%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY-----------KGYIEAVDQVVAVKQLD 88
T +V + E AD ++ F ++G+G +G+V+ + Y V + +K D
Sbjct: 12 THHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 70
Query: 89 RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD 148
R + R+ EV H +V L + L+ +F+ G L F L +
Sbjct: 71 RVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKE 121
Query: 149 QEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG 208
+ + +A A L++LH + +IYRD K NILLD E + KL+DFGL+K
Sbjct: 122 VMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 177
Query: 209 PTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
K S GT Y APE T+ +D +SFGV++ E++TG E
Sbjct: 178 IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
Query: 269 QNLVTWAK 276
++ AK
Sbjct: 236 MTMILKAK 243
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 60
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 114
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + T + GT
Sbjct: 115 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 167
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA-----DGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ +V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLVG-----IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 27/248 (10%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY-----------KGYIEAVDQVVAVKQLD 88
T +V + E AD ++ F ++G+G +G+V+ + Y V + +K D
Sbjct: 11 THHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 69
Query: 89 RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD 148
R + R+ EV H +V L + L+ +F+ G L F L +
Sbjct: 70 RVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKE 120
Query: 149 QEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG 208
+ + +A A L++LH + +IYRD K NILLD E + KL+DFGL+K
Sbjct: 121 VMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 176
Query: 209 PTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
K S GT Y APE T+ +D +SFGV++ E++TG E
Sbjct: 177 IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 269 QNLVTWAK 276
++ AK
Sbjct: 235 MTMILKAK 242
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA-----DGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ +V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 33/240 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAVK +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------GLEYLHD 173
LV E+ S G + ++ + RMK AK ++Y H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+++RD KA N+LLDA+ N K++DFG + G K G Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQ 185
Query: 234 TGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ + DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 20/204 (9%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQL-DRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+GEG +G+V Y + ++VAVK L + G Q + E+ +L + H+++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 117 IGYCAD-GDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C D G++ + LV E++ GSL ++ LP + + + A +G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDY---LP--RHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG---TYGYCAPEY 231
I+R A N+LLD + K+ DFGLAK P G ++ R G + Y APE
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWY-APEC 185
Query: 232 AMTGQLTKKSDVYSFGVVLLELIT 255
+ SDV+SFGV L EL+T
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G + L +Q + T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTL 175
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 27/248 (10%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY-----------KGYIEAVDQVVAVKQLD 88
T +V + E AD ++ F ++G+G +G+V+ + Y V + +K D
Sbjct: 11 THHVKEGHEKADPSQ-FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 69
Query: 89 RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD 148
R + R+ EV H +V L + L+ +F+ G L F L +
Sbjct: 70 RVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKE 120
Query: 149 QEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG 208
+ + +A A L++LH + +IYRD K NILLD E + KL+DFGL+K
Sbjct: 121 VMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 176
Query: 209 PTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
K S GT Y APE T+ +D +SFGV++ E++TG E
Sbjct: 177 IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 269 QNLVTWAK 276
++ AK
Sbjct: 235 MTMILKAK 242
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 33/240 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAV+ +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK------GLEYLHD 173
LV E+ S G + ++ + RMK AK ++Y H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+++RD KA N+LLDA+ N K++DFG + G K G+ Y APE
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQ 185
Query: 234 TGQLT-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ + DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 123
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLTK 239
RD A N L++ + K+SDFGL++ D ++ V + + PE M + +
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 240 KSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLLE 294
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS---- 236
Query: 295 GQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 237 -----------------CWHEKADERP 246
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 62 VGEGGYGRVYKG-------YIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+G+G + +++KG Y + + V +K LD++ S FF M+S + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
G C GD+ ILV EF+ GSL+ + L ++ ++ ++++A A + +L +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG------GKDHVSTRVMGTYGYCA 228
+I+ + A NILL E + K + KL G KD + R+ +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI----PWVP 185
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPL--LRDKKKF 285
PE + L +D +SFG L E+ +G KPL L ++K
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGD-----------------KPLSALDSQRKL 228
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALEYLSSP 336
D Q P + + C+ + D RP ++ L L +P
Sbjct: 229 QFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L++ + K+SDFGL++ D T +G+ + PE M + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVL----DDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLL 293
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS--- 256
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 257 ------------------CWHEKADERP 266
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 65 GGYGRVYKGYIEAVDQVVAVKQL---DRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
G +G V+K + ++ VAVK D+ Q RE F+ M +H+NL+ I
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSEREIFSTPGM----KHENLLQFIAAEK 79
Query: 122 DGD----QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA-- 175
G + L+ F GSL ++ + W +A ++GL YLH+
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 176 ------DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
P + +RDFK+ N+LL ++ L+DFGLA G + +GT Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 230 EYAMTGQLT------KKSDVYSFGVVLLELITGRSAIDNS-----RPSEEQNLVTWAKPL 278
E + G + + D+Y+ G+VL EL++ A D P EE+ P
Sbjct: 195 E-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEE---IGQHPS 250
Query: 279 LRDKKKFTMMAD--PLLEGQYPRK-GLYQALAVAGMCLQEDADSR 320
L + ++ + P ++ + + GL Q C DA++R
Sbjct: 251 LEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K+++FG + P+ + T + GT
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTL 172
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 127
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLTK 239
RD A N L++ + K+SDFGL++ D ++ V + + PE M + +
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 240 KSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLLE 294
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS---- 240
Query: 295 GQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 241 -----------------CWHEKADERP 250
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 61 LVGEGGYGRVYKGYI--EAVDQVVAVKQL-DRSGNQGSREFFAEV-LMLSLVQHQNLVNL 116
++GEG +G+V K I + + A+K++ + + R+F E+ ++ L H N++NL
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 117 IGYCADGDQRILVYEFMSNGSL-----ENHFLDLPP-------DQEPLDWFTRMKIAGGA 164
+G C L E+ +G+L ++ L+ P L + A
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A+G++YL + I+RD A NIL+ + K++DFGL++ G++ + MG
Sbjct: 142 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 193
Query: 225 --GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT--GRSAIDNSRPSEEQNL---VTWAKP 277
+ A E T SDV+S+GV+L E+++ G + + L KP
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 253
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQE 315
L D + + +M E Y R Q L L+E
Sbjct: 254 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLTK 239
RD A N L++ + K+SDFGL++ D ++ V + + PE M + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 240 KSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLLE 294
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS---- 256
Query: 295 GQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 257 -----------------CWHEKADERP 266
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 61 LVGEGGYGRVYKGYI--EAVDQVVAVKQL-DRSGNQGSREFFAEV-LMLSLVQHQNLVNL 116
++GEG +G+V K I + + A+K++ + + R+F E+ ++ L H N++NL
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 117 IGYCADGDQRILVYEFMSNGSL-----ENHFLDLPP-------DQEPLDWFTRMKIAGGA 164
+G C L E+ +G+L ++ L+ P L + A
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A+G++YL + I+RD A NIL+ + K++DFGL++ G++ + MG
Sbjct: 152 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 203
Query: 225 --GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT--GRSAIDNSRPSEEQNL---VTWAKP 277
+ A E T SDV+S+GV+L E+++ G + + L KP
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 263
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQE 315
L D + + +M E Y R Q L L+E
Sbjct: 264 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLTK 239
RD A N L++ + K+SDFGL++ D ++ V + + PE M + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 240 KSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLLE 294
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS---- 241
Query: 295 GQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 242 -----------------CWHEKADERP 251
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLD 144
++ + E++++ V H+N++ L+ + Q + + + + +L + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-SQVIQ 120
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
+ D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGL
Sbjct: 121 MELDHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
A+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 173 AR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
LA+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQ 111
+FN ++G+G +G+V + D++ AVK L + + E +L+L
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 112 NLVNLIGYCADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
+ + C R+ V E+++ G L H + +EP F +IA GL +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA----IGLFF 457
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM-GTYGYCAP 229
L +IYRD K N++LD+E + K++DFG+ K G V+T+ GT Y AP
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAP 511
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
E K D ++FGV+L E++ G++ + E
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 134
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLTK 239
RD A N L++ + K+SDFGL++ D ++ V + + PE M + +
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 240 KSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLLE 294
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS---- 247
Query: 295 GQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 248 -----------------CWHEKADERP 257
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
LA+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 172 LAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 45/292 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHFL----DLPPDQEPLDWFTR-------MKIAG 162
NL+G C G +++ EF G+L + + P + P D + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR--- 219
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGD 209
Query: 220 VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPL 278
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------F 260
Query: 279 LRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 261 CRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 41/268 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V G VA+K + + G+ EF E ++ + H+ LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+M+NG L N+ ++ + +++ + +EYL ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 182 RDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMTGQLT 238
RD A N L++ + K+SDFGL++ ++ S+R G+ + PE M + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 239 KKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWA----KPLLRDKKKFTMMADPLL 293
KSD+++FGV++ E+ + G+ + SE + +P L +K +T+M
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS--- 241
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRP 321
C E AD RP
Sbjct: 242 ------------------CWHEKADERP 251
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 31/233 (13%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
LA+ T G + T + T Y APE + + D++S G ++ E+I G
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTL 172
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 44 FKYQELADATEN-FNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ---GSREFF 99
+K+ E T+N F ++G+GG+G V + A ++ A K+L++ + G
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
E +L V + +V+L D LV M+ G L+ H + Q +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVF 290
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
A GLE LH ++YRD K NILLD + ++SD GLA P G + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--QTIKGR 345
Query: 220 VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
V GT GY APE + T D ++ G +L E+I G+S +
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAVK +D++ S ++ F EV ++ ++ H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 120 CADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
LV E+ S G + ++ + ++E F ++ ++Y H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI------VSAVQYCHQ---K 125
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+++RD KA N+LLDA+ N K++DFG + G K G+ Y APE +
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKY 182
Query: 238 T-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK--FTMMAD 290
+ DV+S GV+L L++G S P + QNL + +LR K + F M D
Sbjct: 183 DGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPD-----------QEPLDWFTRMKI 160
VNL+G C G +++ E+ G L N FL PP +E L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE T +SDV+S+G++L E+ +
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQ 111
+FN ++G+G +G+V + D++ AVK L + + E +L+L
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 112 NLVNLIGYCADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
+ + C R+ V E+++ G L H + +EP F +IA GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA----IGLFF 136
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM-GTYGYCAP 229
L +IYRD K N++LD+E + K++DFG+ K G V+T+ GT Y AP
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAP 190
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
E K D ++FGV+L E++ G++ + E
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNLIGYC 120
+G G Y VYKG + VA+K++ +G+ E+ ++ ++H+N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY---------- 170
++ LV+EFM N L + + G +GLE
Sbjct: 73 HTENKLTLVFEFMDND---------------LKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 171 LHDVA---DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
L +A + +++RD K N+L++ KL DFGLA+ G + + + T Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTLWYR 175
Query: 228 APEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
AP+ M + S D++S G +L E+ITG+ + E+ L+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 44 FKYQELADATEN-FNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ---GSREFF 99
+K+ E T+N F ++G+GG+G V + A ++ A K+L++ + G
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
E +L V + +V+L D LV M+ G L+ H + Q +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVF 290
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
A GLE LH ++YRD K NILLD + ++SD GLA P G + R
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--QTIKGR 345
Query: 220 VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
V GT GY APE + T D ++ G +L E+I G+S +
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K+++FG + P+ + T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR-SGNQGSREFF-AEVLMLSLVQHQNLVNLIGY 119
+G G YGR K ++ +++ K+LD S + ++ +EV +L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 120 CADGDQRIL--VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD- 176
D L V E+ G L + +++ LD +++ L+ H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 177 -PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
V++RD K +N+ LD + N KL DFGLA++ + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 236 QLTKKSDVYSFGVVLLEL 253
+KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR-- 219
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKG 199
Query: 220 -VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKP 277
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 250
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 251 FCRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLSLV 108
E+F+ +G+G +G VY ++A+K QL+++G + + EV + S +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHL 69
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLP--PDQEPLDWFTRMKIAGGAAK 166
+H N++ L GY D + L+ E+ G++ L +Q + T + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------AN 123
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
L Y H VI+RD K N+LL + K++DFG + P+ +D + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDY 176
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
PE +K D++S GV+ E + G
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR-- 219
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKG 199
Query: 220 -VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKP 277
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 250
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 251 FCRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR-- 219
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKG 208
Query: 220 -VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKP 277
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 259
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 260 FCRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVN 115
+GEG +G+V K A VAVK L + + R+ +E +L V H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHF---------------------LDLPPDQEPLDW 154
L G C+ +L+ E+ GSL LD PD+ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
+ A ++G++YL +++ +++RD A NIL+ K+SDFGL++ +D
Sbjct: 150 GDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR--DVYEED 204
Query: 215 HVSTRVMGTY--GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNL 271
R G + A E T +SDV+SFGV+L E++T G + P NL
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + R M +L+ C +++ D RP D+ LE
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQ-----------------CWKQEPDKRPVFADISKDLE 307
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 53/300 (17%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVN 115
+GEG +G+V K A VAVK L + + R+ +E +L V H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHF---------------------LDLPPDQEPLDW 154
L G C+ +L+ E+ GSL LD PD+ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
+ A ++G++YL A+ +++RD A NIL+ K+SDFGL++ +D
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEED 204
Query: 215 HVSTRVMGTY--GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNL 271
R G + A E T +SDV+SFGV+L E++T G + P NL
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + R M +L+ C +++ D RP D+ LE
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQ-----------------CWKQEPDKRPVFADISKDLE 307
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTL 173
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLSLV 108
E+F+ +G+G +G VY ++A+K QL+++G + + EV + S +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHL 69
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLP--PDQEPLDWFTRMKIAGGAAK 166
+H N++ L GY D + L+ E+ G++ L +Q + T + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------AN 123
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
L Y H VI+RD K N+LL + K++DFG + P+ + T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDY 176
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
PE +K D++S GV+ E + G
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 27/248 (10%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY---------KGYIEA--VDQVVAVKQLD 88
T +V E AD + +F ++G+G +G+V+ G++ A V + +K D
Sbjct: 15 THHVKAGSEKADPS-HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRD 73
Query: 89 RSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD 148
R + R+ A+V H +V L + L+ +F+ G L F L +
Sbjct: 74 RVRTKMERDILADV------NHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKE 124
Query: 149 QEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG 208
+ + +A A GL++LH + +IYRD K NILLD E + KL+DFGL+K
Sbjct: 125 VMFTEEDVKFYLAE-LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEA 180
Query: 209 PTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEE 268
K S GT Y APE + +D +S+GV++ E++TG E
Sbjct: 181 IDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
Query: 269 QNLVTWAK 276
L+ AK
Sbjct: 239 MTLILKAK 246
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 53/300 (17%)
Query: 62 VGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVN 115
+GEG +G+V K A VAVK L + + R+ +E +L V H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHF---------------------LDLPPDQEPLDW 154
L G C+ +L+ E+ GSL LD PD+ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
+ A ++G++YL A+ +++RD A NIL+ K+SDFGL++ +D
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEED 204
Query: 215 HVSTRVMGTY--GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNL 271
R G + A E T +SDV+SFGV+L E++T G + P NL
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 272 VTWAKPLLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ + R M +L+ C +++ D RP D+ LE
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQ-----------------CWKQEPDKRPVFADISKDLE 307
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 117 SFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHFLD-----LPPDQEPLDWFTR-------MKIA 161
NL+G C G +++ EF G+L + +P + P D + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RV 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 263
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 264 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 307
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 115
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ G T + T Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWY 170
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLS 106
A E+F +G+G +G VY + ++A+K QL+++G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 107 LVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGA 164
++H N++ L GY D + L+ E+ G++ L +Q + T +
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A L Y H VI+RD K N+LL + K++DFG + P+ + + GT
Sbjct: 118 ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTL 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
Y PE +K D++S GV+ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 115
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 116 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 115
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 116 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 123
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 124 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 178
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+F L+G GG+G+V+K + +K++ + + RE V L+ + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 115 NLIGYCADG-----------DQR------ILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
+ G C DG R + EF G+LE E LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLA 124
Query: 158 MKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVS 217
+++ KG++Y+H +I RD K SNI L K+ DFGL GK
Sbjct: 125 LELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---R 178
Query: 218 TRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI 254
R GT Y +PE + K+ D+Y+ G++L EL+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR-- 219
AKG+E+L A I+RD A NILL + K+ DFGLA+ KD R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDXVRKG 208
Query: 220 -VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKP 277
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 259
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 260 FCRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RV 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 252
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 253 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 7 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 63
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 64 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 123
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 124 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 173
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
LA+ T G + + T Y APE + + D++S G ++ E+I G
Sbjct: 174 LAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEV-LMLSLVQHQNLVNL 116
++G+G +G+V +A + AVK L + + + +E ++L V+H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
D+ V ++++ G L H EP F +IA L YLH +
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA----LGYLHSLN- 159
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST--RVMGTYGYCAPEYAMT 234
++YRD K NILLD++ + L+DFGL K +H ST GT Y APE
Sbjct: 160 --IVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 235 GQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLLE 294
+ D + G VL E++ G SR + E KP L+ K T A LLE
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILNKP-LQLKPNITNSARHLLE 271
Query: 295 G 295
G
Sbjct: 272 G 272
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 123
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 124 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 178
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 10 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 66
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 67 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 126
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 127 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 176
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + T + T Y APE + + D++S G ++ E++ GR
Sbjct: 177 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 234 DYIDQWNKVIEQ 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RV 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 261
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 262 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 305
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 120
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 121 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 175
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+S F+D L PL ++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 61 LVGEGGYGRVYKGYI--EAVDQVVAVKQL-DRSGNQGSREFFAEV-LMLSLVQHQNLVNL 116
++GEG +G+V K I + + A+K++ + + R+F E+ ++ L H N++NL
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 117 IGYCADGDQRILVYEFMSNGSL-----ENHFLDLPP-------DQEPLDWFTRMKIAGGA 164
+G C L E+ +G+L ++ L+ P L + A
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
A+G++YL + I+R+ A NIL+ + K++DFGL++ G++ + MG
Sbjct: 149 ARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRL 200
Query: 225 --GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT--GRSAIDNSRPSEEQNL---VTWAKP 277
+ A E T SDV+S+GV+L E+++ G + + L KP
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP 260
Query: 278 LLRDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQE 315
L D + + +M E Y R Q L L+E
Sbjct: 261 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RV 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 252
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 253 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 296
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR-SGNQGSREFF-AEVLMLSLVQHQNLVNLIGY 119
+G G YGR K ++ +++ K+LD S + ++ +EV +L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 120 CADGDQRIL--VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD- 176
D L V E+ G L + +++ LD +++ L+ H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 177 -PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
V++RD K +N+ LD + N KL DFGLA++ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 236 QLTKKSDVYSFGVVLLEL 253
+KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHF------LDLPP----DQEPLDWFTRMKIAGG 163
VNL+G C G +++ E+ G L N L+ P L + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE T +SDV+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGAAKG 167
H N+V L+ ++ LV+EF+S +DL D L I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
L+ L V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 228 APEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 35/232 (15%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL-----DRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+GEG + VYK + +Q+VA+K++ + + +R E+ +L + H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 116 LIGYCADGDQRILVYEFMSNG---SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH 172
L+ LV++FM ++++ L L P + + M + +GLEYLH
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH--IKAYMLMTL-----QGLEYLH 129
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
+++RD K +N+LLD KL+DFGLAK G + + T Y APE
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELL 184
Query: 233 MTGQLTKKS-DVYSFGVVLLELIT------GRSAIDN--------SRPSEEQ 269
++ D+++ G +L EL+ G S +D P+EEQ
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL--DLPPDQEPLDWFTRMKI---A 161
NL+G C G +++ EF G+L N F+ + P+ D+ T + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RV 220
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLL 279
+ APE T +SDV+SFGV+L E+ + G S + EE
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 298
Query: 280 RDKKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
R K+ T M P Y +YQ + C + RP ++V L
Sbjct: 299 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 342
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR-SGNQGSREFF-AEVLMLSLVQHQNLVNLIGY 119
+G G YGR K ++ +++ K+LD S + ++ +EV +L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 120 CADGDQRIL--VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD- 176
D L V E+ G L + +++ LD +++ L+ H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 177 -PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
V++RD K +N+ LD + N KL DFGLA++ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 236 QLTKKSDVYSFGVVLLEL 253
+KSD++S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+S F+D L PL ++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KDFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPP--DQEPLDWFTRMKIAGGAAKG 167
H N+V L+ ++ LV+EF+S +DL D L I +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
L+ L V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 228 APEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 117/276 (42%), Gaps = 27/276 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA--EVLMLSLVQHQNLVNLIGY 119
+GEG YG V+K Q+VA+K+ S + + A E+ ML ++H NLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ LV+E+ + L H LD P + A + H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----- 123
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TGQLT 238
I+RD K NIL+ KL DFG A+L TG D+ V T Y +PE + Q
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLVGDTQYG 181
Query: 239 KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV--TWAKPLLRDKKKFTM--------M 288
DV++ G V EL++G ++ L+ T + R ++ F+ +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 289 ADP----LLEGQYPRKGLYQALAVAGMCLQEDADSR 320
DP LE ++P Y AL + CL D R
Sbjct: 242 PDPEDMEPLELKFPNIS-YPALGLLKGCLHMDPTER 276
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 37/249 (14%)
Query: 42 NVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGN 92
N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 2 NNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ 58
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLP 146
++ + E++++ V H+N++ L+ + +V E M + ++L
Sbjct: 59 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL- 117
Query: 147 PDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK 206
D E + + + G +++LH +I+RD K SNI++ ++ K+ DFGLA+
Sbjct: 118 -DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GRSAI 260
T G + T + T Y APE + + D++S G ++ E++ GR I
Sbjct: 169 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 261 DNSRPSEEQ 269
D EQ
Sbjct: 226 DQWNKVIEQ 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNL 113
+G G +G+V + G +AV +V AVK L + + +E +E+ ++S L QH+N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
VNL+G C G +++ E+ G L N L L+ IA A + LH
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNF---LRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 173 ---------DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
+A I+RD A N+LL K+ DFGLA+ V
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ APE T +SDV+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAE 101
++++ D + ++ ++G G + V + ++VA+K + + G +GS E E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NE 66
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIA 161
+ +L ++H N+V L G L+ + +S G L + ++ E ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER----DASRLI 122
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNIL---LDAEFNPKLSDFGLAKLGPTGGKDHVST 218
++YLHD+ +++RD K N+L LD + +SDFGL+K+ G V +
Sbjct: 123 FQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLS 176
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GT GY APE +K D +S GV+ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAE 101
++++ D + ++ ++G G + V + ++VA+K + + G +GS E E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NE 66
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIA 161
+ +L ++H N+V L G L+ + +S G L + ++ E ++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER----DASRLI 122
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNIL---LDAEFNPKLSDFGLAKLGPTGGKDHVST 218
++YLHD+ +++RD K N+L LD + +SDFGL+K+ G V +
Sbjct: 123 FQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLS 176
Query: 219 RVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GT GY APE +K D +S GV+ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 114
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 41/278 (14%)
Query: 62 VGEGGYGRV----YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G G +G V +KG + VAVK + + G+ EFF E + + H LV
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----VAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C+ +V E++SNG L N+ EP +++ +G+ +L
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ---LLEMCYDVCEGMAFL---ESH 123
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT---YGYCAPEYAMT 234
I+RD A N L+D + K+SDFG+ + +VS+ +GT + APE
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHY 179
Query: 235 GQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRDKKKFTMMADPLL 293
+ + KSDV++FG+++ E+ + G+ D SE V+ L R + +D +
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH----LASDTIY 235
Query: 294 EGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTALE 331
+ Y C E + RP +++++E
Sbjct: 236 QIMYS-------------CWHELPEKRPTFQQLLSSIE 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSL-------ENHFL---DLPPDQEPLDWFTRMKIAGG 163
NL+G C G +++ EF G+L N F+ DL D L+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ-- 152
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMG 222
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARL 208
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ APE T +SDV+SFGV+L E+ + G S + EE R
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FXRR 259
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
K+ T M P Y +YQ + C + RP ++V L
Sbjct: 260 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLV 108
+NF ++G+G +G+V ++ + AVK L + + E +LSL
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 109 Q-HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+ H L L D+ V EF++ G L H E F +I
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA---- 136
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
L +LHD +IYRD K N+LLD E + KL+DFG+ K G G + GT Y
Sbjct: 137 LMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPDYI 191
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
APE D ++ GV+L E++ G + +
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 115
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 116
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 114
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 116
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 115
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHFLDLPPDQEPL-----DWFTRMKI---AGGAA 165
NL+G C G +++ EF G+L + + P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMGTY 224
KG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
+ APE T +SDV+SFGV+L E+ + G S + EE R K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRRLK 261
Query: 284 KFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
+ T M P Y +YQ + C + RP ++V L
Sbjct: 262 EGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 301
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 116
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 114
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 118
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 119 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 173
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR---SGNQGSREFFAE 101
++++ D + ++ ++G G + V + ++VA+K + + G +GS E E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NE 66
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM--- 158
+ +L ++H N+V L G L+ + +S G L + ++ ++T
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-------GFYTERDAS 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNIL---LDAEFNPKLSDFGLAKLGPTGGKDH 215
++ ++YLHD+ +++RD K N+L LD + +SDFGL+K+ G
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--- 173
Query: 216 VSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
V + GT GY APE +K D +S GV+ L+ G
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 31/233 (13%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+AD+T + P +G G G V + + VAVK+L R
Sbjct: 5 KVDNQFYSVEVADSTFTVLKRYQQLKP---IGSGAQGIVCAAFDTVLGINVAVKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E+++L V H+N+++L+ + LV E M + +
Sbjct: 62 QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
LA+ T + + T + T Y APE + D++S G ++ EL+ G
Sbjct: 172 LAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 62 VGEGGYGR--VYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG +G+ + K + V+ + R ++ E EV +L+ ++H N+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 120 CADGDQRILVYEFMSNGSLENHFLD----LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
+ +V ++ G L L + + LDWF ++ +A L V
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKHVH 142
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
D +++RD K+ NI L + +L DFG+A++ ++ +GT Y +PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 236 QLTKKSDVYSFGVVLLELITGRSAID 261
KSD+++ G VL EL T + A +
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----Q 114
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 115
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ + + V T Y A
Sbjct: 116 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYE--------FMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
N+V L+ ++ LV+E FM +L + LP + L F ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG--IPLPLIKSYL--FQLLQ---- 113
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
GL + H V++RD K N+L++ E KL+DFGLA+ G T + T
Sbjct: 114 ---GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVT 165
Query: 224 YGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
Y APE + + + D++S G + E++T R+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KDFMDASALTGIPLPLIKSYLFQLL----Q 114
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V + + VA+K+L R ++ + E+L+L +QH+N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA--------KGLEYL 171
Y+F +L +P Q L +K + KGL+Y+
Sbjct: 92 FTPASSLRNFYDF---------YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
H V++RD K N+ ++ + K+ DFGLA+ +V TR Y APE
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEV 194
Query: 232 AMTG-QLTKKSDVYSFGVVLLELITGRS 258
++ + D++S G ++ E++TG++
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 115
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ + + V T Y A
Sbjct: 116 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+F L+G GG+G+V+K + ++++ + + RE V L+ + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 115 NLIGYCADG--------DQRI----------------------LVYEFMSNGSLENHFLD 144
+ G C DG D + + EF G+LE
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE- 126
Query: 145 LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGL 204
E LD +++ KG++Y+H +I+RD K SNI L K+ DFGL
Sbjct: 127 -KRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 205 AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI 254
GK TR GT Y +PE + K+ D+Y+ G++L EL+
Sbjct: 183 VTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+K+ LD E+ +L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 117
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ + + V T Y A
Sbjct: 118 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V + + VA+K+L R ++ + E+L+L +QH+N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA--------KGLEYL 171
Y+F +L +P Q L M+ + KGL+Y+
Sbjct: 110 FTPASSLRNFYDF---------YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
H V++RD K N+ ++ + K+ DFGLA+ +V TR Y APE
Sbjct: 161 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEV 212
Query: 232 AMTG-QLTKKSDVYSFGVVLLELITGRS 258
++ + D++S G ++ E++TG++
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAK 166
H N+V L+ ++ LV+EF+ F+D L PL ++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPLIKSYLFQLL----Q 117
Query: 167 GLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
GL + H V++RD K N+L++ E KL+DFGLA+ + + V T Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 227 CAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
APE + + + D++S G + E++T R+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAE 101
++++ D + ++ ++G G + V + ++VA+K + + G +GS E E
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NE 66
Query: 102 VLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRM--- 158
+ +L ++H N+V L G L+ + +S G L + ++ ++T
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-------GFYTERDAS 119
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNIL---LDAEFNPKLSDFGLAKLGPTGGKDH 215
++ ++YLHD+ +++RD K N+L LD + +SDFGL+K+ G
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--- 173
Query: 216 VSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
V + GT GY APE +K D +S GV+ L+ G
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS--REFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + +V + VAVK +D++ S ++ F EV + ++ H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 120 CADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
LV E+ S G + ++ + ++E F ++ ++Y H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI------VSAVQYCHQKF-- 133
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+++RD KA N+LLDA+ N K++DFG + G K G Y APE +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKY 189
Query: 238 T-KKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDK 282
+ DV+S GV+L L++G S P + QNL + +LR K
Sbjct: 190 DGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGK 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+ + LD E+ +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 116
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQ 111
ENF +GEG YG VYK + +VVA+ + LD E+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGL 168
N+V L+ ++ LV+EF+ F+D L PL ++ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYLFQLL----QGL 115
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
+ H V++RD K N+L++ E KL+DFGLA+ G T + T Y A
Sbjct: 116 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
PE + + + D++S G + E++T R+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF-FAEVLMLSLVQHQN 112
++F+ ++G G Y +V ++ D++ A+K + + + + + Q N
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 113 LVNLIGY--CADGDQRIL-VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
L+G C + R+ V E+++ G L H E F +I+ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS----LALN 135
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
YLH+ +IYRD K N+LLD+E + KL+D+G+ K G G ++ GT Y AP
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 190
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E D ++ GV++ E++ GRS D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 43/284 (15%)
Query: 65 GGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGD 124
G +G V+K + +++ VAVK Q + + EV L ++H+N++ IG G
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRGT 91
Query: 125 Q----RILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH-------D 173
L+ F GSL + FL + W IA A+GL YLH D
Sbjct: 92 SVDVDLWLITAFHEKGSLSD-FLK----ANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLA---KLGPTGGKDHVSTRVMGTYGYCAPE 230
P + +RD K+ N+LL ++DFGLA + G + G H +GT Y APE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ---VGTRRYMAPE 203
Query: 231 YAMTGQLT------KKSDVYSFGVVLLELITGRSAIDNS-----RPSEEQNLVTWAKPLL 279
+ G + + D+Y+ G+VL EL + +A D P EE+ P L
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE---IGQHPSL 259
Query: 280 RDKKKFTMMAD--PLLEGQYPRK-GLYQALAVAGMCLQEDADSR 320
D ++ + P+L + + G+ C DA++R
Sbjct: 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 62 VGEGGYGRVYK----GYIEA-VDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNLV 114
+G G +G+V + G I++ VAVK L S + RE +E+ +LS L H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----------- 163
NL+G C G +++ E+ G L N FL + D F K +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLN-FL-----RRKRDSFICSKTSPAIMEDDELALDL 167
Query: 164 ---------AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
AKG+ +L A I+RD A NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G+ L EL +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 62 VGEGGYGRVYK----GYIEA-VDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNLV 114
+G G +G+V + G I++ VAVK L S + RE +E+ +LS L H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----------- 163
NL+G C G +++ E+ G L N FL + D F K +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLN-FL-----RRKRDSFICSKTSPAIMEDDELALDL 160
Query: 164 ---------AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
AKG+ +L A I+RD A NILL K+ DFGLA+
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G+ L EL +
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V Y + Q VAVK+L R +R + E+ +L ++H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 120 ------CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
D + LV M L N E + + + +GL+Y+H
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFLVYQLL-----RGLKYIHS 149
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 234 TG-QLTKKSDVYSFGVVLLELITGRSAIDNS 263
+ D++S G ++ EL+ G++ S
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF-FAEVLMLSLVQHQN 112
++F+ ++G G Y +V ++ D++ A+K + + + + + Q N
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 113 LVNLIGY--CADGDQRIL-VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
L+G C + R+ V E+++ G L H E F +I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS----LALN 120
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
YLH+ +IYRD K N+LLD+E + KL+D+G+ K G G ++ GT Y AP
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 175
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E D ++ GV++ E++ GRS D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 62 VGEGGYGRVYK----GYIEA-VDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNLV 114
+G G +G+V + G I++ VAVK L S + RE +E+ +LS L H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----------- 163
NL+G C G +++ E+ G L N FL + D F K +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLN-FL-----RRKRDSFICSKTSPAIMEDDELALDL 144
Query: 164 ---------AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
AKG+ +L A I+RD A NILL K+ DFGLA+
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G+ L EL +
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREF-FAEVLMLSLVQHQN 112
++F+ ++G G Y +V ++ D++ A+K + + + + + Q N
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 113 LVNLIGY--CADGDQRIL-VYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
L+G C + R+ V E+++ G L H E F +I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS----LALN 124
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
YLH+ +IYRD K N+LLD+E + KL+D+G+ K G G ++ GT Y AP
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 179
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITGRSAID 261
E D ++ GV++ E++ GRS D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 20/229 (8%)
Query: 35 GKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG 94
+AK T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 ARAKVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---- 55
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
E +L +H L L D+ V E+ + G L H +E +
Sbjct: 56 ----VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFT 106
Query: 155 FTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK 213
R + G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 EERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 163
Query: 214 DHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
GT Y APE + D + GVV+ E++ GR N
Sbjct: 164 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 62 VGEGGYGRVY-----KGYIEAVDQVVAVKQLDR--------SGNQGSREFFAEVLMLSLV 108
+G G YG V G+ E +V+ Q D+ + + E + E+ +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 109 QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
H N++ L D LV EF G L ++ + D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGI 159
Query: 169 EYLHDVADPPVIYRDFKASNILLDAE---FNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
YLH +++RD K NILL+ + N K+ DFGL+ KD+ +GT
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAY 213
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
Y APE + + +K DV+S GV++ L+ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 37/252 (14%)
Query: 39 KTPNVFKYQELADAT-------ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR-- 89
K N F E+ D+T +N P +G G G V Y +++ VA+K+L R
Sbjct: 5 KRDNNFYSVEIGDSTFTVLKRYQNLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 90 SGNQGSREFFAEVLMLSLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFL 143
++ + E++++ V H+N++ L+ + +V E M + +
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121
Query: 144 DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFG 203
+L D E + + + G +++LH +I+RD K SNI++ ++ K+ DFG
Sbjct: 122 EL--DHERMSYLLYQMLCG-----IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 204 LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT------GR 257
LA+ T G + + T Y APE + + D++S G ++ E++ GR
Sbjct: 172 LAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 258 SAIDNSRPSEEQ 269
ID EQ
Sbjct: 229 DYIDQWNKVIEQ 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 62 VGEGGYGRVYK----GYIEA-VDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNLV 114
+G G +G+V + G I++ VAVK L S + RE +E+ +LS L H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----------- 163
NL+G C G +++ E+ G L N FL + D F K +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLN-FL-----RRKRDSFICSKTSPAIMEDDELALDL 162
Query: 164 ---------AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
AKG+ +L A I+RD A NILL K+ DFGLA+
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G+ L EL +
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V Y + Q VAVK+L R +R + E+ +L ++H+N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 120 ------CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
D + LV M G+ N+ + + F ++ +GL+Y+H
Sbjct: 88 FTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL----LRGLKYIHS 141
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y APE +
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 193
Query: 234 TG-QLTKKSDVYSFGVVLLELITGRSAIDNS 263
+ D++S G ++ EL+ G++ S
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 62 VGEGGYGRVYK----GYIEA-VDQVVAVKQLDRSGNQGSRE-FFAEVLMLS-LVQHQNLV 114
+G G +G+V + G I++ VAVK L S + RE +E+ +LS L H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----------- 163
NL+G C G +++ E+ G L N FL + D F K +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLN-FL-----RRKRDSFICSKTSPAIMEDDELALDL 167
Query: 164 ---------AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
AKG+ +L A I+RD A NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
V + APE T +SDV+S+G+ L EL +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQ 109
+ ENF +GEG YG VYK + +VVA+K+ LD E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 110 HQNLVNLIGYCADGDQRILVYE--------FMSNGSLENHFLDLPPDQEPLDWFTRMKIA 161
H N+V L+ ++ LV+E FM +L + LP + L F ++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG--IPLPLIKSYL--FQLLQ-- 117
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM 221
GL + H V++RD K N+L++ E KL+DFGLA+ + + V
Sbjct: 118 -----GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 222 GTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRS 258
T Y APE + + + D++S G + E++T R+
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 23/243 (9%)
Query: 23 KQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVV 82
++ + A R+ GKA + + ++F+ ++G G Y +V ++ D++
Sbjct: 31 EEEKEAMNTRESGKASSSLGL----------QDFDLLRVIGRGSYAKVLLVRLKKTDRIY 80
Query: 83 AVKQLDRSGNQGSREF-FAEVLMLSLVQHQNLVNLIGY--CADGDQRIL-VYEFMSNGSL 138
A++ + + + + + Q N L+G C + R+ V E+++ G L
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 139 ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK 198
H E F +I+ L YLH+ +IYRD K N+LLD+E + K
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEIS----LALNYLHERG---IIYRDLKLDNVLLDSEGHIK 193
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
L+D+G+ K G G D ST GT Y APE D ++ GV++ E++ GRS
Sbjct: 194 LTDYGMCKEGLRPG-DTTST-FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
Query: 259 AID 261
D
Sbjct: 252 PFD 254
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQNLVNLIGYC 120
VG+G YG V++G + VAVK Q RE E+ L++H N++ I
Sbjct: 16 VGKGRYGEVWRGLWHG--ESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASD 71
Query: 121 A----DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH---- 172
Q L+ + +GSL + FL ++ L+ +++A AA GL +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYD-FLQ----RQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 173 -DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGTYGYCAP 229
P + +RDFK+ N+L+ + ++D GLA + G D + +GT Y AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 230 EYAMTGQLT-------KKSDVYSFGVVLLELITGRSAIDN 262
E + Q+ K +D+++FG+VL E+ R I N
Sbjct: 187 E-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVN 223
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 36 KAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--- 92
K + T N F+Y +L F LV E GR Y I + +VA ++ +
Sbjct: 145 KHRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 93 --QGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE 150
Q SR F L S H L ++ Y G E + S E F +
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG-------ELFFHLSRERVFSE------ 250
Query: 151 PLDWFTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGP 209
R + G L+YLH ++ V+YRD K N++LD + + K++DFGL K
Sbjct: 251 -----DRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--- 300
Query: 210 TGGKDHVSTRVM-GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGR 257
G KD + + GT Y APE + D + GVV+ E++ GR
Sbjct: 301 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQG-----SREFFAEVLML 105
AT + P +G G YG VYK VA+K + +G +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 106 SLVQHQNLVNLIGYCADG--DQRI---LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H N+V L+ CA D+ I LV+E + + L + PP P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TIKDL 117
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL++LH +++RD K NIL+ + KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPV 171
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
+ T Y APE + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQE----PLDWFTRMKIAGGAAKGLEYLHDVAD 176
+ ++ +E L Q+ + +F + +GL+Y+H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQIL-----RGLKYIHSAN- 164
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAMTG 235
V++RD K SN+L++ + K+ DFGLA++ P T + T Y APE +
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 236 Q-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 36 KAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--- 92
K + T N F+Y +L F LV E GR Y I + +VA ++ +
Sbjct: 142 KHRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 93 --QGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE 150
Q SR F L S H L ++ Y G E + S E F +
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG-------ELFFHLSRERVFSE------ 247
Query: 151 PLDWFTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGP 209
R + G L+YLH ++ V+YRD K N++LD + + K++DFGL K
Sbjct: 248 -----DRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--- 297
Query: 210 TGGKDHVSTRVM-GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGR 257
G KD + + GT Y APE + D + GVV+ E++ GR
Sbjct: 298 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 37 AKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN---- 92
A+ T N F+Y +L F LV E GR Y I + +VA ++ +
Sbjct: 4 ARVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 93 -QGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEP 151
Q SR F L S H D+ V E+ + G L H +E
Sbjct: 63 LQNSRHPFLTALKYSFQTH-------------DRLCFVMEYANGGELFFHL-----SRER 104
Query: 152 LDWFTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
+ R + G L+YLH ++ V+YRD K N++LD + + K++DFGL K
Sbjct: 105 VFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---E 159
Query: 211 GGKDHVSTRVM-GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGR 257
G KD + + GT Y APE + D + GVV+ E++ GR
Sbjct: 160 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 72 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 128 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 182
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G G V + + VAVK+L R ++ + E+++L V H+N+++L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 120 ------CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
+ LV E M + ++L D E + + + G +++LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIHMEL--DHERMSYLLYQMLCG-----IKHLHS 142
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+I+RD K SNI++ ++ K+ DFGLA+ T + + T + T Y APE +
Sbjct: 143 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVIL 196
Query: 234 TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++S G ++ EL+ G + ++ N V
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V Y + Q VAVK+L R +R + E+ +L ++H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 120 ------CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
D + LV M G+ N+ + + F ++ +GL+Y+H
Sbjct: 96 FTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL----LRGLKYIHS 149
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+I+RD K SN+ ++ + ++ DFGLA+ +V+TR Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 234 TG-QLTKKSDVYSFGVVLLELITGRSAIDNS 263
+ D++S G ++ EL+ G++ S
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 82 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G +G V G + VAVK + ++ F AE +++ ++H NLV L+G
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ + +V E+M+ GSL ++ + L +K + + +EYL +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 124
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLT 238
+RD A N+L+ + K+SDFGL K+ ST+ G + APE + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 239 KKSDVYSFGVVLLEL 253
KSDV+SFG++L E+
Sbjct: 178 TKSDVWSFGILLWEI 192
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 96 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 152 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 206
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 38 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 95 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 151 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 205
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 206 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 31/245 (12%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSREFFA 100
+ KY EL + +G GG+ +V ++VA+K +D++ G+ R
Sbjct: 8 LLKYYELHET---------IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKT 57
Query: 101 EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--DLPPDQEPLDWFTRM 158
E+ L ++HQ++ L ++ +V E+ G L ++ + D ++E F ++
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI 117
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST 218
A Y H RD K N+L D KL DFGL P G KD+
Sbjct: 118 VSAVAYVHSQGYAH---------RDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQ 167
Query: 219 RVMGTYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKP 277
G+ Y APE L ++DV+S G++L L+ G P ++ N++ K
Sbjct: 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG------FLPFDDDNVMALYKK 221
Query: 278 LLRDK 282
++R K
Sbjct: 222 IMRGK 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G +G V G + VAVK + ++ F AE +++ ++H NLV L+G
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ + +V E+M+ GSL ++ + L +K + + +EYL +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 139
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLT 238
+RD A N+L+ + K+SDFGL K+ ST+ G + APE + +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 239 KKSDVYSFGVVLLELIT 255
KSDV+SFG++L E+ +
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 106 SLVQHQNLVNLIGY------CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
++H+N++ L+ + + LV M G+ N+ + + F +
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQ 129
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTR 219
I +GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 130 IL----RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 220 VMGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 183 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 30/238 (12%)
Query: 35 GKAKKTPNVFKYQ------ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLD 88
G +++ P ++ + E+ + +N +P VG G YG V + VAVK+L
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLS 67
Query: 89 RSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--- 143
R ++ + E+ +L ++H+N++ L+ E ++ L H +
Sbjct: 68 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGAD 123
Query: 144 --DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSD 201
++ Q+ D + I +GL+Y+H AD +I+RD K SN+ ++ + K+ D
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILD 179
Query: 202 FGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
FGLA+ +V+TR Y APE + + D++S G ++ EL+TGR+
Sbjct: 180 FGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
+K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 125
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G +G V G + VAVK + ++ F AE +++ ++H NLV L+G
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ + +V E+M+ GSL ++ + L +K + + +EYL +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 311
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT--YGYCAPEYAMTGQLT 238
+RD A N+L+ + K+SDFGL K+ ST+ G + APE + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 239 KKSDVYSFGVVLLEL 253
KSDV+SFG++L E+
Sbjct: 365 TKSDVWSFGILLWEI 379
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 111 QNLVNLIGYCADGDQRILV-YEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLE 169
V L +C D+++ + NG L + + E F +I LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LE 151
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
YLH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITG 256
E K SD+++ G ++ +L+ G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 30/238 (12%)
Query: 35 GKAKKTPNVFKYQ------ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLD 88
G +++ P ++ + E+ + +N +P VG G YG V + VAVK+L
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLS 67
Query: 89 RSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL--- 143
R ++ + E+ +L ++H+N++ L+ E ++ L H +
Sbjct: 68 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGAD 123
Query: 144 --DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSD 201
++ Q+ D + I +GL+Y+H AD +I+RD K SN+ ++ + K+ D
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILD 179
Query: 202 FGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
FGLA+ +V+TR Y APE + + D++S G ++ EL+TGR+
Sbjct: 180 FGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G +G V G + VAVK + ++ F AE +++ ++H NLV L+G
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 122 DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ + +V E+M+ GSL ++ + L +K + + +EYL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 130
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTGQLT 238
+RD A N+L+ + K+SDFGL K+ ST+ G + APE +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 239 KKSDVYSFGVVLLEL 253
KSDV+SFG++L E+
Sbjct: 184 TKSDVWSFGILLWEI 198
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 123
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 124
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGA-----------AKGLE 169
+ R E M + L H + D + +K + +GL+
Sbjct: 107 -NDIIRAPTIEQMKDVYLVTHLMGA-------DLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 170 YLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCA 228
Y+H V++RD K SN+LL+ + K+ DFGLA++ P T + T Y A
Sbjct: 159 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 229 PEYAMTGQ-LTKKSDVYSFGVVLLELITGR 257
PE + + TK D++S G +L E+++ R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 122
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQG-----SREFFAEVLML 105
AT + P +G G YG VYK VA+K + +G +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 106 SLVQHQNLVNLIGYCADG--DQRI---LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H N+V L+ CA D+ I LV+E + L + PP P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAE--TIKDL 117
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL++LH +++RD K NIL+ + KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPV 171
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
+ T Y APE + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+M G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + K++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+M G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + K++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLD-RSGNQG-----SREFFAEVLML 105
AT + P +G G YG VYK VA+K + +G +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 106 SLVQHQNLVNLIGYCADG--DQRI---LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H N+V L+ CA D+ I LV+E + + L + PP P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TIKDL 117
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL++LH +++RD K NIL+ + KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPV 171
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
+ T Y APE + D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 83 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 83 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 148
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 83 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR- 193
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGS----------REFFAE 101
AT + P +G G YG VYK VA+K + R N G RE A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREV-AL 64
Query: 102 VLMLSLVQHQNLVNLIGYCADG--DQRI---LVYEFMSNGSLENHFLDLPPDQEPLDWFT 156
+ L +H N+V L+ CA D+ I LV+E + + L + PP P + T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--T 121
Query: 157 RMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ +GL++LH +++RD K NIL+ + KL+DFGLA++
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMA 175
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 145
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 145
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 29 EVPERYQNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 86 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 141
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 142 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 196
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 197 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 24 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 81 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 191
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 129
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 72 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 128 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 182
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 31/233 (13%)
Query: 37 AKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN---- 92
++ T N F+Y +L F LV E GR Y I + +VA ++ +
Sbjct: 3 SRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 93 -QGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEP 151
Q SR F L S H D+ V E+ + G L H +E
Sbjct: 62 LQNSRHPFLTALKYSFQTH-------------DRLCFVMEYANGGELFFHL-----SRER 103
Query: 152 LDWFTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
+ R + G L+YLH ++ V+YRD K N++LD + + K++DFGL K
Sbjct: 104 VFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---E 158
Query: 211 GGKDHVSTRVM-GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
G KD + + GT Y APE + D + GVV+ E++ GR N
Sbjct: 159 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 211
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG---SREFFAEVLMLSLVQHQNLVNLIG 118
+G G +G+V G + VAVK L+R + + E+ L L +H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPP 178
+ +V E++S G L D ++ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
V++RD K N+LLDA N K++DFGL+ + G S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 239 K--KSDVYSFGVVLLELITGRSAIDNSR 264
+ D++S GV+L L+ G D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 27/247 (10%)
Query: 20 RSSKQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVD 79
R S ++ E F + + ++ E+ + +N +P VG G YG V +
Sbjct: 17 RGSHMLEMSQERPTFYRQELNKTIW---EVPERYQNLSP---VGSGAYGSVCAAFDTKTG 70
Query: 80 QVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGS 137
VAVK+L R ++ + E+ +L ++H+N++ L+ E ++
Sbjct: 71 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVY 126
Query: 138 LENHFL-----DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLD 192
L H + ++ Q+ D + I +GL+Y+H AD +I+RD K SN+ ++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVN 182
Query: 193 AEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLL 251
+ K+ DFGLA+ +V+TR Y APE + + D++S G ++
Sbjct: 183 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 252 ELITGRS 258
EL+TGR+
Sbjct: 238 ELLTGRT 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 145
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 24 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 81 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 191
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 18 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 75 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 130
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 185
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 186 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 72 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 128 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 182
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 183 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 83 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 193
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 194 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G Y + +A + AVK +D+S S E ++L QH N++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI---EILLRYGQHPNIITLKDVYD 91
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
DG LV E M G L + L E F I K +EYLH V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI----GKTVEYLHSQG---VVH 144
Query: 182 RDFKASNIL-LDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
RD K SNIL +D NP ++ DFG AK ++ + T + APE
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVT 273
+ D++S G++L ++ G + N + ++T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 24 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 81 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 191
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 148
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G Y + +A + AVK +D+S S E ++L QH N++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI---EILLRYGQHPNIITLKDVYD 91
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
DG LV E M G L + L E F I K +EYLH V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI----GKTVEYLHSQG---VVH 144
Query: 182 RDFKASNIL-LDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
RD K SNIL +D NP ++ DFG AK ++ + T + APE
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVT 273
+ D++S G++L ++ G + N + ++T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 150
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 21 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 78 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 73 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 129 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 183
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 184 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ D T
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGX 182
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
+ T Y APE + + D++S G ++ EL+TGR+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 17 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 74 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 129
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 130 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 184
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 185 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 73 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 129 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 183
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 184 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 21 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 78 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 147
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 39/229 (17%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+F ++G+G +G+V K + A+K++ R + +EV++L+ + HQ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 115 NLIGYCADGDQRILV---------------YEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
Y A ++R V E+ NG+L + +Q+ +++ +
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW---R 120
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------------- 206
+ + L Y+H +I+RD K NI +D N K+ DFGLAK
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYA-MTGQLTKKSDVYSFGVVLLELI 254
G D++ T +GT Y A E TG +K D+YS G++ E+I
Sbjct: 178 QNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 82 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 21 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 78 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 188
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 96 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 152 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR- 206
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 82 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 192
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P +G G YG V + VAVK+L R ++ + E+ +L
Sbjct: 24 EVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 81 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 191
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 192 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 38 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 95 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 151 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 205
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 206 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 31 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 88 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 31 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 88 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 144
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 96 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 152 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 206
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 207 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 35 GKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYIEAVDQVVAVKQLDRSGN 92
G + TP +F + +E + +G G YG V + + V++ + + +
Sbjct: 18 GDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST 77
Query: 93 QGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPL 152
+ + EV +L L+ H N++ L + D LV E G L D +
Sbjct: 78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKF 133
Query: 153 DWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGP 209
+ I G+ YLH +++RD K N+LL+++ K+ DFGL+ +
Sbjct: 134 NEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 210 TGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + + +K DV+S GV+L L+ G
Sbjct: 191 NQKK---MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 82 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 138 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR- 192
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 193 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 21 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 78 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR- 188
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 189 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN-----QG 94
T N F+Y +L F LV E GR Y I + +VA ++ + Q
Sbjct: 8 TMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
SR F L S H D+ V E+ + G L H +E +
Sbjct: 67 SRHPFLTALKYSFQTH-------------DRLCFVMEYANGGELFFHL-----SRERVFS 108
Query: 155 FTRMKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK 213
R + G L+YLH ++ V+YRD K N++LD + + K++DFGL K G K
Sbjct: 109 EDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIK 163
Query: 214 DHVSTRVM-GTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGR 257
D + + GT Y APE + D + GVV+ E++ GR
Sbjct: 164 DGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
VGEG YG VYK ++ ++VA+K+ LD E+ +L + H N+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 120 CADGDQRILVYEFMSNG---SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
LV+EFM L+ + L Q + + ++ G+ + H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR-------GVAHCHQHR- 139
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TG 235
+++RD K N+L++++ KL+DFGLA+ G T + T Y AP+ M +
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 236 QLTKKSDVYSFGVVLLELITGR 257
+ + D++S G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + V A + A+K L++ + + E ++S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 144
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
VGEG YG VYK ++ ++VA+K+ LD E+ +L + H N+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 120 CADGDQRILVYEFMSNG---SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
LV+EFM L+ + L Q + + ++ G+ + H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLR-------GVAHCHQHR- 139
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TG 235
+++RD K N+L++++ KL+DFGLA+ G T + T Y AP+ M +
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 236 QLTKKSDVYSFGVVLLELITGR 257
+ + D++S G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 93 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 145
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 42 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 99 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 155 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR- 209
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 210 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 91 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 91 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 91 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 93 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 145
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 93 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 145
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGL + +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 91 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NIL+ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 99 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 151
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 152 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 91 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 111 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 163
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 164 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 20/226 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 52
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 53 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 106
Query: 158 MKIAGG-AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
GT Y APE + D + GVV+ E++ GR N
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + K++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 20/226 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 52
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 53 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 106
Query: 158 MKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
GT Y APE + D + GVV+ E++ GR N
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 20/226 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 52
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 53 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 106
Query: 158 MKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
GT Y APE + D + GVV+ E++ GR N
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ D+GLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 52
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 53 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 106
Query: 158 MKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNS 263
GT Y APE + D + GVV+ E++ GR N
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLSLVQHQNLVNLIGYC 120
+GEG Y VYKG + D +VA+K++ +G+ EV +L ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
LV+E++ + L+ + D ++ +GL Y H V+
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHR---QKVL 122
Query: 181 YRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TGQLTK 239
+RD K N+L++ KL+DFGLA+ K + + V T Y P+ + + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 240 KSDVYSFGVVLLELITGRSAIDNSRPSEEQNLV 272
+ D++ G + E+ TGR S E+ + +
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 20/226 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 1 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 52
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 53 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 106
Query: 158 MKIAGG-AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 107 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 161
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDN 262
GT Y APE + D + GVV+ E++ GR N
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 96 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 148
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 97 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 149
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 88 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 140
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 89 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 141
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 34 FGKAKKTPNVFKYQELA----DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR 89
F + K F QEL + E + VG G YG V Y +AVK+L R
Sbjct: 27 FTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR 86
Query: 90 SGNQ--GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL---- 143
++ + E+ +L ++H+N++ L+ E ++ L H +
Sbjct: 87 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADL 142
Query: 144 -DLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDF 202
++ Q+ D + I +GL+Y+H AD +I+RD K SN+ ++ + K+ DF
Sbjct: 143 NNIVKCQKLTDDHVQFLIYQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDF 198
Query: 203 GLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
GLA+ +V+TR Y APE + D++S G ++ EL+TGR+
Sbjct: 199 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 38 KKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE 97
K T N F Y +L F LV E GR Y I + ++A ++ +
Sbjct: 6 KVTMNDFDYLKLL-GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT------- 57
Query: 98 FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +L +H L L D+ V E+ + G L H +E + R
Sbjct: 58 -VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEER 111
Query: 158 MKIAGGA-AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
+ G LEYLH V+YRD K N++LD + + K++DFGL K G + G
Sbjct: 112 ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--T 166
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNS 263
GT Y APE + D + GVV+ E++ GR N
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--NQGSREFFA-EVLMLSLVQH 110
E+F ++GEG + A + A+K L++ + + E ++S + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
V L D ++ + NG L + + E F +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEY 145
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH +I+RD K NILL+ + + +++DFG AK+ K + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K SD+++ G ++ +L+ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 89 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 141
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA---EVLMLSLVQHQNLVNLIG 118
+GEG +G+V Q VA+K + R + S E+ L L++H +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLP--PDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
++V E+ + G L ++ ++ + E +F ++ A +EY H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA------IEYCHR--- 126
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+++RD K N+LLD N K++DFGL+ + G S G+ Y APE + G+
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGK 182
Query: 237 LTK--KSDVYSFGVVLLELITGRSAIDN 262
L + DV+S G+VL ++ GR D+
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG---SREFFAEVLMLSLVQHQNLVNLIG 118
+G G +G+V G + VAVK L+R + + E+ L L +H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPP 178
+ +V E++S G L D ++ ++ ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 179 VIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
V++RD K N+LLDA N K++DFGL+ + G S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 239 K--KSDVYSFGVVLLELITGRSAIDNSR 264
+ D++S GV+L L+ G D+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L + ++ + E+ +L
Sbjct: 31 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 88 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 144 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 198
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 199 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 124
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P +V + +C
Sbjct: 125 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 134
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P +V + +C
Sbjct: 135 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 12 SLSFKDKRRSSKQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVY 71
S++ ++ SS ++ A +I+K +F+++E +G G + V
Sbjct: 1 SMARENGESSSSWKKQAEDIKK---------IFEFKET------------LGTGAFSEVV 39
Query: 72 KGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVY 130
+A ++ AVK + + +G E+ +L ++H+N+V L + LV
Sbjct: 40 LAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVM 99
Query: 131 EFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNIL 190
+ +S G L + ++ E D T ++ A + YLH + +++RD K N+L
Sbjct: 100 QLVSGGELFDRIVEKGFYTEK-DASTLIRQVLDA---VYYLHRMG---IVHRDLKPENLL 152
Query: 191 L---DAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFG 247
D E +SDFGL+K+ GK V + GT GY APE +K D +S G
Sbjct: 153 YYSQDEESKIMISDFGLSKME---GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 209
Query: 248 VVLLELITG 256
V+ L+ G
Sbjct: 210 VIAYILLCG 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 128
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P +V + +C
Sbjct: 129 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 59 DCLVGEGGYGRVYKGY-IEAVDQVVAVKQLDRSGNQGSREFFAE-VLMLSLVQHQNLVNL 116
D +G G + VYKG E +V + DR + R+ F E L +QH N+V
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 117 IGY---CADGDQRI-LVYEFMSNGSLENHFLDLPPDQEPL--DWFTRMKIAGGAAKGLEY 170
G + I LV E ++G+L+ + + + W ++ KGL++
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQF 144
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAP 229
LH PP+I+RD K NI + K+ D GLA L + + V+GT + AP
Sbjct: 145 LH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAP 199
Query: 230 EYAMTGQLTKKSDVYSFGVVLLELITG 256
E + + DVY+FG LE T
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 49 LADATENFNPDCLVGEGGYGRVYKGY-IEAVDQVVAVKQLD-RSGNQGS-----REFFAE 101
L A + + +GEG YG+V+K ++ + VA+K++ ++G +G RE A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 102 VLMLSLVQHQNLVNLIGYCA----DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFT 156
+ L +H N+V L C D + ++ LV+E + + L + +P P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 157 RMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
M +GL++LH V++RD K NIL+ + KL+DFGLA++
Sbjct: 124 DMMFQ--LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMA 175
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLE------LITGRSAIDN 262
T V+ T Y APE + D++S G + E L G S +D
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLXG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 49 LADATENFNPDCLVGEGGYGRVYKGY-IEAVDQVVAVKQLD-RSGNQGS-----REFFAE 101
L A + + +GEG YG+V+K ++ + VA+K++ ++G +G RE A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 102 VLMLSLVQHQNLVNLIGYCA----DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFT 156
+ L +H N+V L C D + ++ LV+E + + L + +P P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 157 RMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
M +GL++LH V++RD K NIL+ + KL+DFGLA++
Sbjct: 124 DMMFQ--LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMA 175
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 124
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P +V + +C
Sbjct: 125 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNL---- 116
+G GG+G V + + + VA+KQ + + +RE + E+ ++ + H N+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 117 --IGYCADGDQRILVYEFMSNGSLE---NHFLDLPPDQE-PLDWFTRMKIAGGAAKGLEY 170
+ A D +L E+ G L N F + +E P+ + + L Y
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSALRY 137
Query: 171 LHDVADPPVIYRDFKASNILLD---AEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LH+ +I+RD K NI+L K+ D G AK G + T +GT Y
Sbjct: 138 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYL 191
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITG-RSAIDNSRPSE 267
APE + T D +SFG + E ITG R + N +P +
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 110 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NI++ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNL---- 116
+G GG+G V + + + VA+KQ + + +RE + E+ ++ + H N+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 117 --IGYCADGDQRILVYEFMSNGSLE---NHFLDLPPDQE-PLDWFTRMKIAGGAAKGLEY 170
+ A D +L E+ G L N F + +E P+ + + L Y
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSALRY 136
Query: 171 LHDVADPPVIYRDFKASNILLD---AEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYC 227
LH+ +I+RD K NI+L K+ D G AK G + T +GT Y
Sbjct: 137 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYL 190
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELITG-RSAIDNSRPSE 267
APE + T D +SFG + E ITG R + N +P +
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NI++ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLAG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKCQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 128
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P +V + +C
Sbjct: 129 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 49 LADATENFNPDCLVGEGGYGRVYKGY-IEAVDQVVAVKQLD-RSGNQGS-----REFFAE 101
L A + + +GEG YG+V+K ++ + VA+K++ ++G +G RE A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AV 64
Query: 102 VLMLSLVQHQNLVNLIGYCA----DGDQRI-LVYEFMSNGSLENHFLDLPPDQEPLDWFT 156
+ L +H N+V L C D + ++ LV+E + + L + +P P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 157 RMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV 216
M +GL++LH V++RD K NIL+ + KL+DFGLA++
Sbjct: 124 DMMFQ--LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMA 175
Query: 217 STRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NI++ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NI++ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 128 LVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKAS 187
+V E++ +L D+ + P+ +++ A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLR----DIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 188 NILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSF 246
NI++ A K+ DFG+A+ + +G + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 247 GVVLLELITGRSAIDNSRP 265
G VL E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ DF LA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA++++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P T + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 152
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 153 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 201
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 79
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F A
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF----YAA 135
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 136 QIVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAK--RVKGR---TWXLCG 187
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 28 AAEIRKFGKAKKTPNVFKYQELADAT---ENFNPDCLVGEGGYGRV-----------YKG 73
++++++F K + K++ A T + F +G G +GRV Y
Sbjct: 5 SSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM 64
Query: 74 YIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFM 133
I +VV +KQ++ + N E +L V LV L D +V E++
Sbjct: 65 KILDKQKVVKLKQIEHTLN--------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 134 SNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA 193
G + +H + EP F +I EYLH + +IYRD K N+L+D
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEYLHSL---DLIYRDLKPENLLIDQ 169
Query: 194 EFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
+ +++DFG AK G+ + + GT Y APE ++ K D ++ GV++ E+
Sbjct: 170 QGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 254 ITG 256
G
Sbjct: 225 AAG 227
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYI---EAVDQVVAVKQLDRSGNQG 94
TP +F A ++ + ++G+G +G V K I E +V++ +Q+ + ++
Sbjct: 12 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
S EV +L + H N++ L + D LV E + G L D ++
Sbjct: 72 S--LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSE 125
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKLGPTG 211
+I G+ Y+H +++RD K N+LL++ + N ++ DFGL+
Sbjct: 126 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + G +K DV+S GV+L L++G
Sbjct: 183 KK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 87
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV- 146
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 147 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 195
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 28 AAEIRKFGKAKKTPNVFKYQELADAT---ENFNPDCLVGEGGYGRV-----------YKG 73
++++++F K + K++ A T + F +G G +GRV Y
Sbjct: 5 SSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM 64
Query: 74 YIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFM 133
I +VV +KQ++ + N E +L V LV L D +V E++
Sbjct: 65 KILDKQKVVKLKQIEHTLN--------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 134 SNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA 193
G + +H + EP F +I EYLH + +IYRD K N+L+D
Sbjct: 117 PGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEYLHSL---DLIYRDLKPENLLIDQ 169
Query: 194 EFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLEL 253
+ +++DFG AK G+ + + GT Y APE ++ K D ++ GV++ E+
Sbjct: 170 QGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 254 ITG 256
G
Sbjct: 225 AAG 227
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV- 172
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 173 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 221
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 134
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDH--VSTRVMGTYGY 226
YL I+RD A N+LL K+ DFGL + P DH + + +
Sbjct: 135 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHXVMQEHRKVPFAW 190
Query: 227 CAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
CAPE T + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 35/243 (14%)
Query: 31 IRKFGKAKKTPNV---FKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQL 87
I GK K +P F ++L D E +G G YG V K + Q++AVK++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGE-------IGRGAYGSVNKMVHKPSGQIMAVKRI 55
Query: 88 DRSGNQGSREFFAEVLM-LSLVQHQN----LVNLIGYC-ADGDQRILVYEFMSNG--SLE 139
+ ++ ++ ++LM L +V + +V G +GD I + E MS
Sbjct: 56 RSTVDEKEQK---QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM-ELMSTSFDKFY 111
Query: 140 NHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKL 199
+ + D P + ++ +A K L +L + + +I+RD K SNILLD N KL
Sbjct: 112 KYVYSVLDDVIPEEILGKITLA--TVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKL 167
Query: 200 SDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPEY----AMTGQLTKKSDVYSFGVVLLELI 254
DFG++ +L + K TR G Y APE A +SDV+S G+ L EL
Sbjct: 168 CDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 255 TGR 257
TGR
Sbjct: 224 TGR 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYI---EAVDQVVAVKQLDRSGNQG 94
TP +F A ++ + ++G+G +G V K I E +V++ +Q+ + ++
Sbjct: 35 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 94
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
S EV +L + H N++ L + D LV E + G L + + ++
Sbjct: 95 S--LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSE 148
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKLGPTG 211
+I G+ Y+H +++RD K N+LL++ + N ++ DFGL+
Sbjct: 149 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + G +K DV+S GV+L L++G
Sbjct: 206 KK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 62 VGEGGYGRVYKGYIEAVD---QVVAVKQLD---RSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G +G V +G +A VAVK L S + +F EV + + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 116 LIGYCADGDQRILVYEFMSNGSL-------ENHFLDLPPDQEPLDWFTRMKIAGGAAKGL 168
L G + +V E GSL + HFL L +R + A+G+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL--------LGTLSRYAVQ--VAEGM 124
Query: 169 EYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-YGYC 227
YL I+RD A N+LL K+ DFGL + P V + +C
Sbjct: 125 GYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 228 APEYAMTGQLTKKSDVYSFGVVLLELIT 255
APE T + SD + FGV L E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 172
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK + + G
Sbjct: 173 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCG 221
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYI---EAVDQVVAVKQLDRSGNQG 94
TP +F A ++ + ++G+G +G V K I E +V++ +Q+ + ++
Sbjct: 36 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 95
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
S EV +L + H N++ L + D LV E + G L + + ++
Sbjct: 96 S--LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSE 149
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKLGPTG 211
+I G+ Y+H +++RD K N+LL++ + N ++ DFGL+
Sbjct: 150 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + G +K DV+S GV+L L++G
Sbjct: 207 KK---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 28/246 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL----- 116
+G GG G V+ D+ VA+K++ + Q + E+ ++ + H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 117 ---------IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+G + + +V E+M L N P +E F + +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLL-----RG 132
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAE-FNPKLSDFGLAKLGPT--GGKDHVSTRVMGTY 224
L+Y+H V++RD K +N+ ++ E K+ DFGLA++ K H+S ++ T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 225 GYCAPEYAMT-GQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
Y +P ++ TK D+++ G + E++TG++ + E+ L+ + P++ ++
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 284 KFTMMA 289
+ +++
Sbjct: 249 RQELLS 254
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ FGLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+F ++G+G +G+V K + A+K++ R + +EV++L+ + HQ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 115 NLIGYCADGDQRILV---------------YEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
Y A ++R V E+ N +L + +Q+ +++ +
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW---R 120
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------------- 206
+ + L Y+H +I+RD K NI +D N K+ DFGLAK
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYA-MTGQLTKKSDVYSFGVVLLELI 254
G D++ T +GT Y A E TG +K D+YS G++ E+I
Sbjct: 178 QNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G+V+K A +A K + G + E E+ +++ + H NL+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
+ +LV E++ G L + +D + LD MK +G+ ++H + ++
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY---IL 209
Query: 181 YRDFKASNILL---DAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+ D K NIL DA+ K+ DFGLA+ K V+ GT + APE +
Sbjct: 210 HLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFV 265
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKK 283
+ +D++S GV+ L++G S +E N + + L D++
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE 311
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWTLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 95 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 147
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P + T Y APE +
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLV--NLIG 118
+GEG YG V Y VA+K++ +Q + E+ +L +H+N++ N I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQ----EPLDWFTRMKIAGGAAKGLEYLHDV 174
+Q VY + +E L Q + + +F + +GL+Y+H
Sbjct: 96 RAPTIEQMKDVY--IVQDLMETDLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIHSA 148
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG-PTGGKDHVSTRVMGTYGYCAPEYAM 233
V++RD K SN+LL+ + K+ DFGLA++ P + T Y APE +
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 234 TGQ-LTKKSDVYSFGVVLLELITGR 257
+ TK D++S G +L E+++ R
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 121
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 177
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 178 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 229
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +K+++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFGLAK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 86
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F A EY
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF----YAAQIVLTFEY 142
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 143 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWTLCGTPEYLAPE 194
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+++D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y APE ++ K D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQL---DRSGNQGSREFFAEVLMLSLVQHQ 111
NF + +G G + VY+ VA+K++ D + + E+ +L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 112 NLVNLIGYCADGDQRILVYEFMSNGSLE---NHFLD---LPPDQEPLDWFTRMKIAGGAA 165
N++ + ++ +V E G L HF L P++ +F ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL------C 146
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE++H V++RD K +N+ + A KL D GL + K + ++GT
Sbjct: 147 SALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPY 201
Query: 226 YCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
Y +PE KSD++S G +L E+ +A+ + ++ NL + KK
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLC-------KKI 250
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRP 321
P L + + L Q + MC+ D + RP
Sbjct: 251 EQCDYPPLPSDHYSEELRQ---LVNMCINPDPEKRP 283
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDR--SGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
VG G YG V VA+K+L R ++ + E+ +L ++H+N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 120 CA------DGDQRILVYEFMSN--GSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
D LV FM G L H E L + KGL Y+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKLGEDRIQFLVYQMLKGLRYI 144
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
H +I+RD K N+ ++ + K+ DFGLA+ + V TR Y APE
Sbjct: 145 HAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEV 196
Query: 232 AMTG-QLTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + T+ D++S G ++ E+ITG++ S
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G + V+ ++ A+K + +S E+ +L ++H+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
LV + +S G L + L+ E ++ ++YLH+ ++
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS----AVKYLHENG---IV 128
Query: 181 YRDFKASNIL-LDAEFNPK--LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+RD K N+L L E N K ++DFGL+K+ G + + GT GY APE
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPY 184
Query: 238 TKKSDVYSFGVVLLELITG 256
+K D +S GV+ L+ G
Sbjct: 185 SKAVDCWSIGVITYILLCG 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + Y+ +V A K + +S + E+ + + + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 118 GYCADGDQRILVYEFMSNGSL-ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
G+ D D +V E SL E H + +F R I +G++YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR- 162
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + + K+ DFGLA G+ + + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKG 218
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + D++S G +L L+ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKG-YIEAVDQV-VAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLVN 115
D +G G +G V +G Y Q+ VA+K L + + + E E ++ + + +V
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
LIG C + +LV E G L + FL ++ P+ ++ + G++YL +
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPL-HKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE-- 128
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD-HVSTRVMGTY--GYCAPEYA 232
++RD A N+LL K+SDFGL+K G D + + R G + + APE
Sbjct: 129 -KNFVHRDLAARNVLLVNRHYAKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + +SDV+S+GV + E ++
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + Y+ +V A K + +S + E+ + + + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 118 GYCADGDQRILVYEFMSNGSL-ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
G+ D D +V E SL E H + +F R I +G++YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR- 162
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + + K+ DFGLA G+ + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKG 218
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + D++S G +L L+ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLML 105
E+ + +N +P VG G YG V + VAVK+L R ++ + E+ +L
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-----DLPPDQEPLDWFTRMKI 160
++H+N++ L+ E ++ L H + ++ Q+ D + I
Sbjct: 76 KHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV 220
+GL+Y+H AD +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 132 YQ-ILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR- 186
Query: 221 MGTYGYCAPEYAMTG-QLTKKSDVYSFGVVLLELITGRS 258
Y APE + + D++S G ++ EL+TGR+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 41 PNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYI---EAVDQVVAVKQLDRSGNQGS 95
P +F A ++ + ++G+G +G V K I E +V++ +Q+ + ++ S
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 96 REFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
EV +L + H N++ L + D LV E + G L + + ++
Sbjct: 79 --LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEV 132
Query: 156 TRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKLGPTGG 212
+I G+ Y+H +++RD K N+LL++ + N ++ DFGL+
Sbjct: 133 DAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
Query: 213 KDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + G +K DV+S GV+L L++G
Sbjct: 190 K---MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V++ A A K + E+ +S+++H LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
D ++ +++YEFMS G L F + + + ++ KGL ++H+ ++
Sbjct: 119 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 182 RDFKASNILLDAEFNP--KLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
D K NI+ + + KL DFGL A L P K V GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGKPVG 228
Query: 239 KKSDVYSFGVVLLELITGRS 258
+D++S GV+ L++G S
Sbjct: 229 YYTDMWSVGVLSYILLSGLS 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+G+G +G VY + ++A+K QL++ G + + E+ + S ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
Y D + L+ EF G L + + F + A + + LH +
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYK-------ELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM-GTYGYCAPEYAMTG 235
VI+RD K N+L+ + K++DFG + P+ + R M GT Y PE
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 236 QLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVT 273
+K D++ GV+ E + G D+ +E +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+G+G +G VY + ++A+K QL++ G + + E+ + S ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
Y D + L+ EF G L + + F + A + + LH +
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYK-------ELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM-GTYGYCAPEYAMTG 235
VI+RD K N+L+ + K++DFG + P+ + R M GT Y PE
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 236 QLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVT 273
+K D++ GV+ E + G D+ +E +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V++ A A K + E+ +S+++H LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
D ++ +++YEFMS G L F + + + ++ KGL ++H+ ++
Sbjct: 225 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 182 RDFKASNILLDAEFNP--KLSDFGL-AKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
D K NI+ + + KL DFGL A L P K V GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGKPVG 334
Query: 239 KKSDVYSFGVVLLELITGRS 258
+D++S GV+ L++G S
Sbjct: 335 YYTDMWSVGVLSYILLSGLS 354
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)
Query: 39 KTPNVFKYQELADATENFNPDCLVGEGGYGRVY---KGYIEAVDQVVAVKQLDRSG---- 91
+T N+ + E ENF ++G G YG+V+ K ++ A+K L ++
Sbjct: 40 RTANLTGHAEKV-GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK 98
Query: 92 NQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRI-LVYEFMSNGSLENHFLDLPPDQE 150
+ + E +L ++ + + Y + ++ L+ ++++ G L H
Sbjct: 99 AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-------S 151
Query: 151 PLDWFTRMKI---AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL 207
+ FT ++ G LE+LH + +IYRD K NILLD+ + L+DFGL+K
Sbjct: 152 QRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK- 207
Query: 208 GPTGGKDHVSTRVMGTYGYCAPEYAMTGQ--LTKKSDVYSFGVVLLELITGRS--AIDNS 263
+ + GT Y AP+ G K D +S GV++ EL+TG S +D
Sbjct: 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
Query: 264 RPSEEQ 269
+ S+ +
Sbjct: 268 KNSQAE 273
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQGSREFFAEVLMLSLVQHQNLVNL 116
+G+G +G VY + ++A+K QL++ G + + E+ + S ++H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 117 IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
Y D + L+ EF G L + F + A + + LH +
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKEL-------QKHGRFDEQRSATFMEELADALHYCHE 133
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM-GTYGYCAPEYAMTG 235
VI+RD K N+L+ + K++DFG + P+ + R M GT Y PE
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 188
Query: 236 QLTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVT 273
+K D++ GV+ E + G D+ +E +
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + Y+ +V A K + +S + E+ + + + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 118 GYCADGDQRILVYEFMSNGSL-ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
G+ D D +V E SL E H + +F R I +G++YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR- 162
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + + K+ DFGLA G+ + GT Y APE
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKG 218
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + D++S G +L L+ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + Y+ +V A K + +S + E+ + + + ++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 118 GYCADGDQRILVYEFMSNGSL-ENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
G+ D D +V E SL E H + +F R I +G++YLH+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR- 146
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + + K+ DFGLA G+ + GT Y APE
Sbjct: 147 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKG 202
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + D++S G +L L+ G+ + S
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 51 DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-----EVLML 105
+ + +F L+GEG YG V + ++VA+K+++ + FA E+ +L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKIL 63
Query: 106 SLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H+N++ + + ++ ++ E M + D + +F +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-IQYFIYQTL 122
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTG 211
+ ++ LH VI+RD K SN+L+++ + K+ DFGLA++ PTG
Sbjct: 123 -----RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 212 GKDHVSTRVMGTYGYCAPEYAMT-GQLTKKSDVYSFGVVLLELITGR 257
+ + T + T Y APE +T + ++ DV+S G +L EL R
Sbjct: 175 QQSGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 62 VGEGGYGRVY--KGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G G +G V+ + +++V+ DRS + AE+ +L + H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
D +V E G L + + L ++ L Y H V
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHV 145
Query: 180 IYRDFKASNILLD--AEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+++D K NIL + +P K+ DFGLA+L + D ST GT Y APE
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS---DEHSTNAAGTALYMAPE-VFKRD 201
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKP 277
+T K D++S GVV+ L+TG + E Q T+ +P
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV + I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV + I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV + I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E++ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + +++DFG AK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T Y AP ++ K D ++ GV++ E+ G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVY--KGYI---EAVDQVVAVKQLDRSGNQG 94
TP F A ++ + ++G+G +G V K I E +V++ +Q+ + ++
Sbjct: 12 TPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
S EV +L + H N+ L + D LV E + G L D ++
Sbjct: 72 S--LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSE 125
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDA---EFNPKLSDFGLAKLGPTG 211
+I G+ Y H +++RD K N+LL++ + N ++ DFGL+
Sbjct: 126 VDAARIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K +GT Y APE + G +K DV+S GV+L L++G
Sbjct: 183 KK---XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 51 DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-----EVLML 105
+ + +F L+GEG YG V + ++VA+K+++ + FA E+ +L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKIL 63
Query: 106 SLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H+N++ + + ++ ++ E M + D + +F +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-IQYFIYQTL 122
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTG 211
+ ++ LH VI+RD K SN+L+++ + K+ DFGLA++ PTG
Sbjct: 123 -----RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 212 GKDHVSTRVMGTYGYCAPEYAMT-GQLTKKSDVYSFGVVLLELITGR 257
+ + T + T Y APE +T + ++ DV+S G +L EL R
Sbjct: 175 QQSGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +K+++ + N E +L V
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN--------EKRILQAVNF 100
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 156
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + +++DFGLAK G+ + + GT Y APE
Sbjct: 157 LHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAK--RVKGR---TWXLCGTPEYLAPE 208
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
L L D +V E+ G + +H + EP F +I EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYI---EAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G E VA+K + RE F E L + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS-FLQV--RKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFRRF 189
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G+G YG V+ G + VAVK + + S E+ L++H+N++ I
Sbjct: 45 IGKGRYGEVWMGKWRG--EKVAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 122 DGD----QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD---- 173
G Q L+ ++ NGSL ++ LD + +K+A + GL +LH
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 174 -VADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--LGPTGGKDHVSTRVMGTYGYCAPE 230
P + +RD K+ NIL+ ++D GLA + T D +GT Y PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 231 YAMTGQLTKK-------SDVYSFGVVLLEL 253
+ L + +D+YSFG++L E+
Sbjct: 217 -VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G Y + +A + AVK +D+S + E ++L QH N++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEI---EILLRYGQHPNIITLKDVYD 86
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
DG +V E M G L LD Q+ + K +EYLH V++
Sbjct: 87 DGKYVYVVTELMKGGEL----LDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 182 RDFKASNIL-LDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
RD K SNIL +D NP ++ DFG AK ++ + T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 238 TKKSDVYSFGVVLLELITGRSAIDN 262
D++S GV+L ++TG + N
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
L L D +V E+ G + +H + EP F +I EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E +L V
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRILQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
L L D +V E+ G + +H + EP F +I EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+++D + K++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + K+ DFGLA K+ G + V + GT Y APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 62 VGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQH 110
+G G +GRV Y I +VV +KQ++ + N E + V
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EKRIQQAVNF 101
Query: 111 QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
LV L D +V E+ G + +H + EP F +I EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----LTFEY 157
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPE 230
LH + +IYRD K N+L+D + K++DFG AK G+ + + GT Y APE
Sbjct: 158 LHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLCGTPEYLAPE 209
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
++ K D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYI---EAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G E VA+K + RE F E L + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS-FLQV--RKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ A KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG YG V+K ++VA+K+ LD E+ +L ++H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ LV+EF + L+ +F D +P KGL + H V
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPE---IVKSFLFQLLKGLGFCHSRN---V 122
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
++RD K N+L++ KL+DFGLA+ + + + V T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 240 KS-DVYSFGVVLLEL 253
S D++S G + EL
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLV--QHQNLVNLIGY 119
VG+G YG V++G + + VAVK ++ + +F E + + V +H+N++ I
Sbjct: 16 VGKGRYGEVWRGSWQG--ENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 120 CA----DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH--- 172
Q L+ + GSL + +L L LD + ++I A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYD-YLQLTT----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 173 --DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG--PTGGKDHVSTRVMGTYGYCA 228
P + +RD K+ NIL+ ++D GLA + T D + +GT Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 229 PEYA-MTGQLT-----KKSDVYSFGVVLLELITGRSAIDN 262
PE T Q+ K+ D+++FG+VL E+ R + N
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLV--QHQNLVNLIGY 119
VG+G YG V++G + + VAVK ++ + +F E + + V +H+N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 120 CA----DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH--- 172
Q L+ + GSL + +L L LD + ++I A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYD-YLQLTT----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 173 --DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG--PTGGKDHVSTRVMGTYGYCA 228
P + +RD K+ NIL+ ++D GLA + T D + +GT Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 229 PEYA-MTGQLT-----KKSDVYSFGVVLLELITGRSAIDN 262
PE T Q+ K+ D+++FG+VL E+ R + N
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + K+ DFGLA K+ G + V + GT Y APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
VI+RD K N+ L+ + K+ DFGLA K+ G + V + GT Y APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 237 LTKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLV 114
D +G G +G V KGY + V V L N + E AE ++ + + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
+IG C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE- 145
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYA 232
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 146 --SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLV 114
D +G G +G V KGY + V V L N + E AE ++ + + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
+IG C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE- 145
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYA 232
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 146 --SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQ-HQNLVNLIGY 119
++GEG + RV Q AVK +++ F EV ML Q H+N++ LI +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ D+ LV+E M GS+ +H + + + A L++LH+ +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 180 IYRDFKASNILLDA--EFNP-KLSDFGLAK-LGPTGGKDHVSTRVM----GTYGYCAPEY 231
+RD K NIL + + +P K+ DFGL + G +ST + G+ Y APE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 232 --AMTGQLT---KKSDVYSFGVVLLELITG 256
A + + + K+ D++S GV+L L++G
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 51 DATENFNPDCL-----VGEGGYGRVYKGYIEAVDQVVAVKQLDRSG---NQGSREFFAEV 102
D E+ N D +G+G +G+V ++ A+K +++ R F E+
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL 66
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFL-DLPPDQEPLDWFTRMKIA 161
++ ++H LVNL D + +V + + G L H ++ +E + F
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI----- 121
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVM 221
L+YL + +I+RD K NILLD + ++DF +A + P ++ T +
Sbjct: 122 CELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMA 175
Query: 222 GTYGYCAPEYAMTGQLTKKS---DVYSFGVVLLELITGR 257
GT Y APE + + S D +S GV EL+ GR
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLVNLI 117
+G G +G V KGY + V V L N + E AE ++ + + +V +I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE---S 136
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTG 235
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLVNLI 117
+G G +G V KGY + V V L N + E AE ++ + + +V +I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE---S 126
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTG 235
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLV 114
D +G G +G V KGY + V V L N + E AE ++ + + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
+IG C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE- 143
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYA 232
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 144 --SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVL 103
K EL D ++F +G G G V+K + V+A K + R + E+
Sbjct: 61 KVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 118
Query: 104 MLSLVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L +V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA--GRIPEQILGKVSIA- 174
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRV 220
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++
Sbjct: 175 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSF 225
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
+GT Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 11 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA- 64
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 65 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 20/225 (8%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR---SGNQGSREFF 99
V K + L E+++ ++G G +G V +A +V A+K L + S F+
Sbjct: 64 VKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFW 123
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQRIL--VYEFMSNGSLENHFLDLPPDQEPLDWFTR 157
E +++ +V L +CA D + L V E+M G L N + ++ ++T
Sbjct: 124 EERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT- 180
Query: 158 MKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVS 217
L+ +H + +I+RD K N+LLD + KL+DFG G H
Sbjct: 181 ----AEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 218 TRVMGTYGYCAPEYAMT----GQLTKKSDVYSFGVVLLELITGRS 258
T V GT Y +PE + G ++ D +S GV L E++ G +
Sbjct: 234 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT 277
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLVNLI 117
+G G +G V KGY + V V L N + E AE ++ + + +V +I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE---S 124
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTG 235
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 12 IGKGRFGEVWRGKWRG--EEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIA- 65
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 66 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 54 ENFNPDCLVGEGGYGRV-----------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV 102
+ F+ +G G +GRV Y I +VV +KQ++ + N E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L V LV L D +V E+++ G + +H + EP F +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV- 151
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMG 222
EYLH + +IYRD K N+L+D + +++DFG AK G+ + + G
Sbjct: 152 ---LTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLCG 200
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
T APE ++ K D ++ GV++ E+ G
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-- 100
V KY++LA +G+G +G V+K Q VA+K++ + A
Sbjct: 17 VSKYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 101 EVLMLSLVQHQNLVNLIGYC---ADGDQRI-----LVYEFMSN---GSLENHFLDLPPDQ 149
E+ +L L++H+N+VNLI C A R LV++F + G L N +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----- 121
Query: 150 EPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
FT +I L L+ + +++RD KA+N+L+ + KL+DFGLA+
Sbjct: 122 -----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRP 265
L + RV+ T Y PE + + D++ G ++ E+ T RS I
Sbjct: 177 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Query: 266 SEEQ 269
+ Q
Sbjct: 235 EQHQ 238
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLVNLI 117
+G G +G V KGY + V V L N + E AE ++ + + +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE---S 130
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTG 235
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKG-YIEAVDQV-VAVKQLDRSGNQG-SREFFAEVLMLSLVQHQNLVN 115
D +G G +G V +G Y Q+ VA+K L + + + E E ++ + + +V
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
LIG C + +LV E G L + +E + ++ + G++YL +
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 176 DPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD-HVSTRVMGTY--GYCAPEYA 232
++R+ A N+LL K+SDFGL+K G D + + R G + + APE
Sbjct: 457 ---FVHRNLAARNVLLVNRHYAKISDFGLSKA--LGADDSYYTARSAGKWPLKWYAPECI 511
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + +SDV+S+GV + E ++
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-- 100
V KY++LA +G+G +G V+K Q VA+K++ + A
Sbjct: 16 VSKYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 65
Query: 101 EVLMLSLVQHQNLVNLIGYC---ADGDQRI-----LVYEFMSN---GSLENHFLDLPPDQ 149
E+ +L L++H+N+VNLI C A R LV++F + G L N +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----- 120
Query: 150 EPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
FT +I L L+ + +++RD KA+N+L+ + KL+DFGLA+
Sbjct: 121 -----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRP 265
L + RV+ T Y PE + + D++ G ++ E+ T RS I
Sbjct: 176 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 233
Query: 266 SEEQ 269
+ Q
Sbjct: 234 EQHQ 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYI---EAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G E VA+K + RE F E L + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 17 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA- 70
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 71 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-- 100
V KY++LA +G+G +G V+K Q VA+K++ + A
Sbjct: 17 VSKYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 101 EVLMLSLVQHQNLVNLIGYC---ADGDQRI-----LVYEFMSN---GSLENHFLDLPPDQ 149
E+ +L L++H+N+VNLI C A R LV++F + G L N +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----- 121
Query: 150 EPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
FT +I L L+ + +++RD KA+N+L+ + KL+DFGLA+
Sbjct: 122 -----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRP 265
L + RV+ T Y PE + + D++ G ++ E+ T RS I
Sbjct: 177 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Query: 266 SEEQ 269
+ Q
Sbjct: 235 EQHQ 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYI---EAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G E VA+K + RE F E L + H ++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRS-FLQV--RKFSLDLASLILYAYQLSTALAYLES---K 510
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ A KL DFGL++ S + + APE +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VI 114
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGT 166
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI------DNSRP 265
Y +PE + +SD++S G+ L+E+ GR I ++SRP
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 62 VGEGGYGRVY--KGYIEAVDQVVAV-KQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIG 118
+G G YG V K + ++ + + K+ + S EV +L + H N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 119 YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPP 178
+ D LV E G L + + L +D MK G YLH
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTTYLHK---HN 124
Query: 179 VIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTG 235
+++RD K N+LL+++ K+ DFGL+ GGK +GT Y APE +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE-VLRK 180
Query: 236 QLTKKSDVYSFGVVLLELITG 256
+ +K DV+S GV+L L+ G
Sbjct: 181 KYDEKCDVWSCGVILYILLCG 201
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 14 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA- 67
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 68 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 75 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 186
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
+ +DG+ I + E M GSL+ + + P + ++ IA +GL YL +
Sbjct: 82 AFYSDGEISICM-EHMDGGSLDQVLKEA--KRIPEEILGKVSIA--VLRGLAYLREKHQ- 135
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGTYGYCAPEYAMTG 235
+++RD K SNIL+++ KL DFG++ G+ D ++ +GT Y APE
Sbjct: 136 -IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGTRSYMAPERLQGT 188
Query: 236 QLTKKSDVYSFGVVLLELITGRSAI 260
+ +SD++S G+ L+EL GR I
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
VI+RD K N+ L+ + K+ DFGLA G+ + + GT Y APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 198
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 46 YQELADATENFNPDCLVGEGGYGRVY--KGYIEAVDQVVAV-KQLDRSGNQGSREFFAEV 102
+Q L+D + +G G YG V K + ++ + + K+ + S EV
Sbjct: 16 FQGLSDRYQRVKK---LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 103 LMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L + H N++ L + D LV E G L + + L +D MK
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK--- 128
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTR 219
G YLH +++RD K N+LL+++ K+ DFGL+ GGK
Sbjct: 129 QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKE 182
Query: 220 VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
+GT Y APE + + +K DV+S GV+L L+ G
Sbjct: 183 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV---------LM 104
+ ++P ++G G V + A AVK ++ + + S E EV ++
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 105 LSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGA 164
+ H +++ LI LV++ M G L D ++ L I
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSL 209
Query: 165 AKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
+ + +LH +++RD K NILLD +LSDFG + G K + GT
Sbjct: 210 LEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTP 263
Query: 225 GYCAPEYAMTGQ------LTKKSDVYSFGVVLLELITG 256
GY APE K+ D+++ GV+L L+ G
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 43 VFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-- 100
V KY++LA +G+G +G V+K Q VA+K++ + A
Sbjct: 17 VSKYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR 66
Query: 101 EVLMLSLVQHQNLVNLIGYC---ADGDQRI-----LVYEFMSN---GSLENHFLDLPPDQ 149
E+ +L L++H+N+VNLI C A R LV++F + G L N +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----- 121
Query: 150 EPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK--- 206
FT +I L L+ + +++RD KA+N+L+ + KL+DFGLA+
Sbjct: 122 -----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGRSAIDNSRP 265
L + RV+ T Y PE + + D++ G ++ E+ T RS I
Sbjct: 177 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Query: 266 SEEQ 269
+ Q
Sbjct: 235 EQHQ 238
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 37 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA- 90
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 91 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
VI+RD K N+ L+ + K+ DFGLA G+ + + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 194
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLV--QHQNLVNLIGY 119
VG+G YG V++G + + VAVK ++ + +F E + + V +H+N++ I
Sbjct: 45 VGKGRYGEVWRGSWQG--ENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 120 CA----DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH--- 172
Q L+ + GSL + +L L LD + ++I A GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYD-YLQL----TTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 173 --DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG--PTGGKDHVSTRVMGTYGYCA 228
P + +RD K+ NIL+ ++D GLA + T D + +GT Y A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 229 PEYA-MTGQLT-----KKSDVYSFGVVLLELITGRSAIDN 262
PE T Q+ K+ D+++FG+VL E+ R + N
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRS---GNQGSREFFAEVLMLSLVQHQNLVNLI 117
+G+GG+ + ++ +V A K + +S + E+ + + HQ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G+ D D +V E SL L+L ++ L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
VI+RD K N+ L+ + K+ DFGLA G+ + + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 194
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNS 263
+ + DV+S G ++ L+ G+ + S
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 80 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 191
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 51 DATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFA-----EVLML 105
+ + +F L+GEG YG V + ++VA+K+++ + FA E+ +L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE----PFDKPLFALRTLREIKIL 63
Query: 106 SLVQHQNLVNLIGY-----CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKI 160
+H+N++ + + ++ ++ E M + D + +F +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-IQYFIYQTL 122
Query: 161 AGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL---------GPTG 211
+ ++ LH VI+RD K SN+L+++ + K+ DFGLA++ PTG
Sbjct: 123 -----RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 212 GKDHVSTRVMGTYGYCAPEYAMT-GQLTKKSDVYSFGVVLLELITGR 257
+ + + T Y APE +T + ++ DV+S G +L EL R
Sbjct: 175 QQSGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 83 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLES---K 135
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 194
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSRE-FFAEVLML 105
A E+ + ++GEG +G VY+G E ++ VAVK + ++E F +E +++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H ++V LIG + I++ E G L H+L+ ++ L T + +
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLE--RNKNSLKVLTLVLYSLQIC 119
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-Y 224
K + YL + ++RD NIL+ + KL DFGL++ +D+ V
Sbjct: 120 KAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 174
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ +PE + T SDV+ F V + E+++
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 106 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 217
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQ-HQNLVNLIGY 119
L+GEG Y +V + AVK +++ F EV L Q ++N++ LI +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
D + LV+E + GS+ H Q+ + ++ A L++LH +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTKG---I 132
Query: 180 IYRDFKASNILLDA--EFNP-KLSDFGLAKLGPTGGKDHVS---------TRVMGTYGYC 227
+RD K NIL ++ + +P K+ DF L +G K + S T G+ Y
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLG----SGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 228 APEY--AMTGQLT---KKSDVYSFGVVLLELITG 256
APE T Q T K+ D++S GVVL +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLV 114
D +G G +G V KGY + V V L N + E AE ++ + + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
+IG C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEES 488
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYA 232
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 489 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G+G +G V++G + VAVK ++ R +F AE+ +++H+N++ I
Sbjct: 50 IGKGRFGEVWRGKWRG--EEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIA- 103
Query: 120 CADGD------QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH- 172
AD Q LV ++ +GSL ++ E + +K+A A GL +LH
Sbjct: 104 -ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 157
Query: 173 ----DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL--GPTGGKDHVSTRVMGTYGY 226
P + +RD K+ NIL+ ++D GLA T D +GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 227 CAPEYAMTG------QLTKKSDVYSFGVVLLEL 253
APE + K++D+Y+ G+V E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVL 103
K EL D ++F +G G G V+K + V+A K + R + E+
Sbjct: 26 KVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 83
Query: 104 MLSLVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L +V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA- 139
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRV 220
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++
Sbjct: 140 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSF 190
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
+GT Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSRE-FFAEVLML 105
A E+ + ++GEG +G VY+G E ++ VAVK + ++E F +E +++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H ++V LIG + I++ E G L H+L+ ++ L T + +
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLER--NKNSLKVLTLVLYSLQIC 135
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-Y 224
K + YL + ++RD NIL+ + KL DFGL++ +D+ V
Sbjct: 136 KAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 190
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ +PE + T SDV+ F V + E+++
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQ---VVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G + + VA+K + RE F E L + H ++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 81 GVITENPVWIIM-ELCTLGELRS-FLQV--RKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 192
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 59 DCLVGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLV 114
D +G G +G V KGY + V V L N + E AE ++ + + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 115 NLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
+IG C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEES 489
Query: 175 ADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYA 232
++RD A N+LL + K+SDFGL+K +++ + G + + APE
Sbjct: 490 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVL 103
K EL D ++F +G G G V+K + V+A K + R + E+
Sbjct: 18 KVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 75
Query: 104 MLSLVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG 162
+L +V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA- 131
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRV 220
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++
Sbjct: 132 -VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSF 182
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPS 266
+GT Y +PE + +SD++S G+ L+E+ GR I + S
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG YG VYK + A+K+ L++ E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ +LV+E + LD+ + L+ T G+ Y HD V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TGQLT 238
++RD K N+L++ E K++DFGLA+ G T + T Y AP+ M + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 239 KKSDVYSFGVVLLELITG 256
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 52 ATENFNPDCLVGEGGYGRVYKGYI-----EAVDQVVAVKQLDRSGNQGSRE-FFAEVLML 105
A E+ + ++GEG +G VY+G E ++ VAVK + ++E F +E +++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 106 SLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+ H ++V LIG + I++ E G L H+L+ ++ L T + +
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGEL-GHYLE--RNKNSLKVLTLVLYSLQIC 123
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT-Y 224
K + YL + ++RD NIL+ + KL DFGL++ +D+ V
Sbjct: 124 KAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPI 178
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ +PE + T SDV+ F V + E+++
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 62 VGEGGYGRVYKGYI---EAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNLVNLI 117
+GEG +G V++G E VA+K + RE F E L + H ++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G + I++ E + G L + FL + + LD + + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRS-FLQV--RKFSLDLASLILYAYQLSTALAYLES---K 510
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
++RD A N+L+ + KL DFGL++ S + + APE +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 238 TKKSDVYSFGVVLLELI 254
T SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGS--REFFAEVLMLSLVQHQNLVNLI 117
+G G +G V KGY + V V L N + E AE ++ + + +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADP 177
G C + + +LV E G L + L ++ D +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKY---LQQNRHVKD-KNIIELVHQVSMGMKYLEE---S 130
Query: 178 PVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTY--GYCAPEYAMTG 235
++RD A N+LL + K+SDFGL+K ++ + G + + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 236 QLTKKSDVYSFGVVLLELIT 255
+ + KSDV+SFGV++ E +
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG YG VYK + A+K+ L++ E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ +LV+E + LD+ + L+ T G+ Y HD V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TGQLT 238
++RD K N+L++ E K++DFGLA+ G T + T Y AP+ M + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 239 KKSDVYSFGVVLLELITG 256
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG YG VYK + A+K+ L++ E+ +L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ +LV+E + LD+ + L+ T G+ Y HD V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM-TGQLT 238
++RD K N+L++ E K++DFGLA+ G T + T Y AP+ M + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 239 KKSDVYSFGVVLLELITG 256
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQ--LDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+GEG YG V+K ++VA+K+ LD E+ +L ++H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ LV+EF + L+ +F D +P KGL + H V
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPE---IVKSFLFQLLKGLGFCHSRN---V 122
Query: 180 IYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
++RD K N+L++ KL++FGLA+ + + + V T Y P+ +L
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 240 KS-DVYSFGVVLLEL 253
S D++S G + EL
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQ-HQNLVNLIGYC 120
+GEG + K + +Q AVK + + +++ E+ L L + H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 121 ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVI 180
D LV E ++ G L E + K+ + ++HDV V+
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS----HMHDVG---VV 128
Query: 181 YRDFKASNILLDAE---FNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
+RD K N+L E K+ DFG A+L P + + T T Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-TLHYAAPELLNQNGY 186
Query: 238 TKKSDVYSFGVVLLELITGR 257
+ D++S GV+L +++G+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA--VI 114
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGT 166
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLV 114
+F ++G+G +G+V K + A+K++ R + +EV +L+ + HQ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 115 NLIGYCADGDQRILV---------------YEFMSNGSLENHFLDLPPDQEPLDWFTRMK 159
Y A ++R V E+ N +L + +Q+ +++ +
Sbjct: 66 RY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW---R 120
Query: 160 IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK------------- 206
+ + L Y+H +I+R+ K NI +D N K+ DFGLAK
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 207 LGPTGGKDHVSTRVMGTYGYCAPEYA-MTGQLTKKSDVYSFGVVLLELI 254
G D++ T +GT Y A E TG +K D YS G++ E I
Sbjct: 178 QNLPGSSDNL-TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA--VI 114
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGT 166
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA--VI 114
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGT 166
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA--VI 114
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMANSFVGT 166
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAI 260
Y +PE + +SD++S G+ L+E+ GR I
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 48 ELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR-EFFAEVLMLS 106
EL D ++F +G G G V+K + V+A K + R + E+ +L
Sbjct: 5 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 107 LVQHQNLVNLIG-YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAA 165
+V G + +DG+ I + E M GSL+ + P ++ IA
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKK--AGRIPEQILGKVSIA--VI 117
Query: 166 KGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK--DHVSTRVMGT 223
KGL YL + +++RD K SNIL+++ KL DFG++ G+ D ++ +GT
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDEMANEFVGT 169
Query: 224 YGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGR 257
Y +PE + +SD++S G+ L+E+ GR
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 62 VGEGGYGRV------YKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+GEGG+ V + G+ A+ +++ +Q DR Q E M L H N++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ------READMHRLFNHPNILR 90
Query: 116 LIGYC----ADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
L+ YC + L+ F G+L N L L + + G +GLE +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFG---LAKLGPTGGKDHVSTRVMG----TY 224
H +RD K +NILL E P L D G A + G + ++ + T
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 225 GYCAPE-YAMTGQ--LTKKSDVYSFGVVLLELITGRSAID 261
Y APE +++ + +++DV+S G VL ++ G D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQ-HQNLVNLIGY 119
++GEG + RV Q AVK +++ F EV ML Q H+N++ LI +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
+ D+ LV+E M GS+ +H + + + A L++LH+ +
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 180 IYRDFKASNILLDA--EFNP-KLSDFGLAK-LGPTGGKDHVSTRVM----GTYGYCAPEY 231
+RD K NIL + + +P K+ DF L + G +ST + G+ Y APE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 232 --AMTGQLT---KKSDVYSFGVVLLELITG 256
A + + + K+ D++S GV+L L++G
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G V++ +A +V K ++ E+ +++ + H L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
D + +L+ EF+S G L F + + + + A +GL+++H+ + +++
Sbjct: 119 DKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 182 RDFKASNILLDAE--FNPKLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLT 238
D K NI+ + + + K+ DFGLA KL P D + T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAAPEIVDREPVG 228
Query: 239 KKSDVYSFGVVLLELITGRS 258
+D+++ GV+ L++G S
Sbjct: 229 FYTDMWAIGVLGYVLLSGLS 248
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 47 QELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLS 106
Q ++ P +G G YG V K Q++AVK++ + N ++ L +S
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 107 LVQHQNLVNLIGYCA---DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
+ + Y A +GD I + E M + SL+ + + + + KIA
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICM-ELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV-MG 222
K LE+LH VI+RD K SN+L++A K+ DFG++ D V+ + G
Sbjct: 162 IVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY----LVDSVAKTIDAG 215
Query: 223 TYGYCAPEYAMTGQLTK-----KSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKP 277
Y APE + +L + KSD++S G+ ++EL R D +W P
Sbjct: 216 CKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP 263
Query: 278 LLRDKKKFTMMADPLLEGQYPR-KGLYQALAVAGMCLQEDADSRP 321
+ K+ ++ +P Q P K + + CL++++ RP
Sbjct: 264 FQQLKQ---VVEEP--SPQLPADKFSAEFVDFTSQCLKKNSKERP 303
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--------QGSRE-FFAEVLM 104
EN+ P ++G G V + + + AVK +D +G Q RE EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 105 LSLVQ-HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
L V H N++ L LV++ M G L D ++ L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRA 132
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
+ + LH + +++RD K NILLD + N KL+DFG + G K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGT 186
Query: 224 YGYCAPEYAMTGQ------LTKKSDVYSFGVVLLELITG 256
Y APE K+ D++S GV++ L+ G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G Y + +A + AVK +D+S + E ++L QH N++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI---EILLRYGQHPNIITLKDVYD 86
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
DG +V E G L + L Q+ + K +EYLH V++
Sbjct: 87 DGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 182 RDFKASNIL-LDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQL 237
RD K SNIL +D NP ++ DFG AK ++ + T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTANFVAPEVLERQGY 197
Query: 238 TKKSDVYSFGVVLLELITGRSAIDN 262
D++S GV+L +TG + N
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--------QGSRE-FFAEVLM 104
EN+ P ++G G V + + + AVK +D +G Q RE EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 105 LSLVQ-HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
L V H N++ L LV++ M G L D ++ L KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRA 119
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
+ + LH + +++RD K NILLD + N KL+DFG + G K V GT
Sbjct: 120 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGT 173
Query: 224 YGYCAPEYAMTGQ------LTKKSDVYSFGVVLLELITG 256
Y APE K+ D++S GV++ L+ G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--------QGSRE-FFAEVLM 104
EN+ P ++G G V + + + AVK +D +G Q RE EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 105 LSLVQ-HQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
L V H N++ L LV++ M G L D ++ L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRA 132
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGT 223
+ + LH + +++RD K NILLD + N KL+DFG + G K V GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSVCGT 186
Query: 224 YGYCAPEYAMTGQ------LTKKSDVYSFGVVLLELITG 256
Y APE K+ D++S GV++ L+ G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 31/288 (10%)
Query: 10 DHSLSFKDKRRSSKQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGR 69
D + D+ +S RR + AK P K +++ E+F ++G G +G
Sbjct: 32 DILICLYDECNNSPLRREKNILEYLEWAK--PFTSKVKQMRLHREDFEILKVIGRGAFGE 89
Query: 70 VYKGYIEAVDQVVAVKQLDRSG--NQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRI 127
V ++ D+V A+K L++ + F E + + + + Y D +
Sbjct: 90 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149
Query: 128 -LVYEFMSNG---SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRD 183
LV ++ G +L + F D P++ + M IA + L Y+H RD
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RD 200
Query: 184 FKASNILLDAEFNPKLSDFG-LAKLGPTGGKDHVSTRVMGTYGYCAPEYAMT-----GQL 237
K NIL+D + +L+DFG KL G S+ +GT Y +PE G+
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ--SSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 238 TKKSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
+ D +S GV + E++ G + P ++LV ++ K++F
Sbjct: 259 GPECDWWSLGVCMYEMLYGET------PFYAESLVETYGKIMNHKERF 300
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 96 REFFAEVLMLSLVQHQNLVNLIGYCADG--DQRILVYEFMSNGSLENHFLDLPPDQEPLD 153
+ + E+ +L + H N+V L+ D D +V+E ++ G + P +PL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLS 135
Query: 154 WFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGK 213
KG+EYLH +I+RD K SN+L+ + + K++DFG++ G
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGS 190
Query: 214 DHVSTRVMGTYGYCAPE-YAMTGQL--TKKSDVYSFGVVLLELITGRSAIDNSR 264
D + + +GT + APE + T ++ K DV++ GV L + G+ + R
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLD-----RSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G+G + V + Q AVK +D S + + E + +++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 116 LI-GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L+ Y +DG +V+EFM L ++ + ++ + + LE L
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 175 ADPPVIYRDFKASNILLDAEFNP---KLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPE 230
D +I+RD K N+LL ++ N KL DFG+A +LG +G V+ +GT + APE
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---LVAGGRVGTPHFMAPE 203
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K DV+ GV+L L++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQL----DRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
+GEG YG VYK ++ VA+K++ + G G+ EV +L +QH+N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELK 99
Query: 118 GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG----AAKGLEYLHD 173
+ L++E+ N ++D PD M++ G+ + H
Sbjct: 100 SVIHHNHRLHLIFEYAENDL--KKYMDKNPD-------VSMRVIKSFLYQLINGVNFCHS 150
Query: 174 VADPPVIYRDFKASNILL---DAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
++RD K N+LL DA P K+ DFGLA+ G T + T Y
Sbjct: 151 RR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQFTHEIITLWYRP 205
Query: 229 PEYAM-TGQLTKKSDVYSFGVVLLELI 254
PE + + + D++S + E++
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNL--- 116
+G G YG V Q VA+K++ + + ++ E+ +L +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 117 ----IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH 172
+ Y + +V + M + + P E + +F + +GL+Y+H
Sbjct: 123 LRPTVPY-GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL-----RGLKYMH 176
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDH--VSTRVMGTYGYCAPE 230
VI+RD K SN+L++ K+ DFG+A+ T +H T + T Y APE
Sbjct: 177 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 231 YAMT-GQLTKKSDVYSFGVVLLELITGR 257
++ + T+ D++S G + E++ R
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGN--QGSREFFAEVLMLSLVQHQNLVNL--- 116
+G G YG V Q VA+K++ + + ++ E+ +L +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 117 ----IGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH 172
+ Y + +V + M + + P E + +F + +GL+Y+H
Sbjct: 122 LRPTVPY-GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL-----RGLKYMH 175
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDH--VSTRVMGTYGYCAPE 230
VI+RD K SN+L++ K+ DFG+A+ T +H T + T Y APE
Sbjct: 176 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 231 YAMT-GQLTKKSDVYSFGVVLLELITGR 257
++ + T+ D++S G + E++ R
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 35/278 (12%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNL 113
++ P +G G YG V K Q++AVK++ + N ++ L +S+
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 114 VNLIGYCA---DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
+ Y A +GD I + E M + SL+ + + + + KIA K LE+
Sbjct: 67 FTVTFYGALFREGDVWICM-ELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV-MGTYGYCAP 229
LH + VI+RD K SN+L++A K+ DFG++ D V+ + G Y AP
Sbjct: 125 LH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY----LVDDVAKDIDAGCKPYMAP 178
Query: 230 EYAMTGQLTK-----KSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKK 284
E + +L + KSD++S G+ ++EL R D +W P + K+
Sbjct: 179 E-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQ- 225
Query: 285 FTMMADPLLEGQYPR-KGLYQALAVAGMCLQEDADSRP 321
++ +P Q P K + + CL++++ RP
Sbjct: 226 --VVEEP--SPQLPADKFSAEFVDFTSQCLKKNSKERP 259
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 30/252 (11%)
Query: 32 RKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSG 91
R F + ++F QE E L+G+G +G+VY G + + + ++R
Sbjct: 12 RSFPRKASQTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDN 69
Query: 92 NQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEP 151
+ F EV+ +H+N+V +G C ++ +L + D +
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIV 126
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK--LSDFGLAKLGP 209
LD +IA KG+ YLH ++++D K+ N+ D N K ++DFGL +
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD---NGKVVITDFGLFSISG 180
Query: 210 T--GGKDHVSTRVM-GTYGYCAPEYAMTGQL-----------TKKSDVYSFGVVLLELIT 255
G+ R+ G + APE + QL +K SDV++ G + EL
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL-H 237
Query: 256 GRSAIDNSRPSE 267
R ++P+E
Sbjct: 238 AREWPFKTQPAE 249
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E M P Q+ D+ T R + A+
Sbjct: 75 VIRLLDWFERPDSFVLILERME------------PVQDLFDFITERGALQEELARSFFWQ 122
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 178
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 238
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEV-LMLSLVQHQNLVNLIGY 119
++ EGG+ VY+ + A+K+L + + +R EV M L H N+V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 120 CADGDQR--------ILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYL 171
+ G + +L+ E +E FL + PL T +KI + ++++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLA 205
H PP+I+RD K N+LL + KL DFG A
Sbjct: 153 HR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 52 ATENFNPDCLV-----GEGGYGRVYKGYIEAVDQVVAVKQLD--RSGNQGSREFFAEVLM 104
+ ENFN ++ G G + V + ++ Q A K L R G E E+ +
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 105 LSLVQH-QNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGG 163
L L + ++NL + + IL+ E+ + G + + L LP E + +++
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFS--LCLPELAEMVSENDVIRLIKQ 139
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEF---NPKLSDFGLAKLGPTGGKDHVSTRV 220
+G+ YLH +++ D K NILL + + + K+ DFG+++ G +
Sbjct: 140 ILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREI 193
Query: 221 MGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
MGT Y APE +T +D+++ G++ L+T S
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 21/233 (9%)
Query: 40 TPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVK-----QLDRSGNQG 94
TP++ D E P +G+G +G VY + +VA+K Q+++ G +
Sbjct: 12 TPDILTRHFTIDDFEIGRP---LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE- 67
Query: 95 SREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
+ E+ + + + H N++ L Y D + L+ E+ G L D
Sbjct: 68 -HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDE 122
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKD 214
I A L Y H VI+RD K N+LL + K++DFG + P+ +
Sbjct: 123 QRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK 179
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRSAIDNSRPSE 267
+ GT Y PE +K D++ GV+ EL+ G +++ +E
Sbjct: 180 ----TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+ E G ++KG + D VV V ++ + SR+F E L + H N++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 122 D--GDQRILVYEFMSNGSLEN------HFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
L+ +M GSL N +F+ +D +K A A+G+ +LH
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFV--------VDQSQAVKFALDMARGMAFLHT 129
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAM 233
+ +P + + ++++D + ++S + + G+ M + APE
Sbjct: 130 L-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR-------MYAPAWVAPEALQ 181
Query: 234 T---GQLTKKSDVYSFGVVLLELIT 255
+ +D++SF V+L EL+T
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SRE-FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMS 134
E + + ++L S SRE EV +L ++H N++ L + +L+ E +S
Sbjct: 39 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 98
Query: 135 NGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNI-LLDA 193
G L D ++E L + G+ YLH + + D K NI LLD
Sbjct: 99 GGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK 151
Query: 194 EF-NP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVL 250
NP KL DFG+A G + + GT + APE L ++D++S GV+
Sbjct: 152 NVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
Query: 251 LELITGRS 258
L++G S
Sbjct: 209 YILLSGAS 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + +++VAVK ++R G + E++ ++H N+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ S G L + E F ++ G + Y H + V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YAHAMQ---VAH 138
Query: 182 RDFKASNILLDAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P K++DFG +K + +GT Y APE + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKEYDG 195
Query: 240 K-SDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
K +DV+S GV L ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLD--RSGNQGSREFFAEVLMLSLVQHQNLVNLIGY 119
+G+G + V + + Q A K ++ + + ++ E + L++H N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPV 179
++ LV++ ++ G L F D+ ++++ + + LE ++ + +
Sbjct: 99 ISEEGFHYLVFDLVTGGEL---FEDIVAR----EYYSEADASHCIHQILESVNHIHQHDI 151
Query: 180 IYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
++RD K N+LL ++ KL+DFGLA G+ GT GY +PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 237 LTKKSDVYSFGVVLLELITG 256
K D+++ GV+L L+ G
Sbjct: 210 YGKPVDIWACGVILYILLVG 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 16/224 (7%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQV---VAVKQL--DRSGNQGSREFF 99
K +++ + F ++G+G +G V + ++ D VAVK L D + EF
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQR------ILVYEFMSNGSLENHFLDLPPDQEP-- 151
E + H ++ L+G + +++ FM +G L L + P
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 152 LDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTG 211
L T ++ A G+EYL + I+RD A N +L + ++DFGL++ +G
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT 255
+ A E T SDV++FGV + E++T
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMS 134
E + + ++L S SRE EV +L ++H N++ L + +L+ E +S
Sbjct: 32 EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 91
Query: 135 NGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNI-LLDA 193
G L D ++E L + G+ YLH + + D K NI LLD
Sbjct: 92 GGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK 144
Query: 194 EF-NP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVL 250
NP KL DFG+A G + + GT + APE L ++D++S GV+
Sbjct: 145 NVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201
Query: 251 LELITGRS 258
L++G S
Sbjct: 202 YILLSGAS 209
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SRE-FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 100
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 157
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 158 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 100
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 157
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 158 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SRE-FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SRE-FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G V++ + D+V K L Q R E+ ++ +V+H N+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVL-----QDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 121 -ADGDQR-----ILVYEFMSNG--SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLH 172
++GD++ LV E++ H+ L ++ + + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL---KQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 173 DVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + +RD K N+LLD KL DFG AK+ G+ +VS + + Y APE
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSX--ICSRYYRAPEL 212
Query: 232 AM-TGQLTKKSDVYSFGVVLLELITGR 257
T D++S G V+ EL+ G+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 150
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 206
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMS 134
E + + ++L S SRE EV +L ++H N++ L + +L+ E +S
Sbjct: 53 EYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVS 112
Query: 135 NGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNI-LLDA 193
G L D ++E L + G+ YLH + + D K NI LLD
Sbjct: 113 GGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK 165
Query: 194 EF-NP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVL 250
NP KL DFG+A G + + GT + APE L ++D++S GV+
Sbjct: 166 NVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 222
Query: 251 LELITGRS 258
L++G S
Sbjct: 223 YILLSGAS 230
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 150
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 206
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 266
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 150
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 206
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 18/230 (7%)
Query: 34 FGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR---S 90
+ K T N K ++L E++ ++G G +G V ++ +V A+K L +
Sbjct: 56 LSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 91 GNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE 150
S F+ E +++ +V L D +V E+M G L N + ++
Sbjct: 114 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 151 PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
++T L+ +H + I+RD K N+LLD + KL+DFG
Sbjct: 174 WARFYT-----AEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 225
Query: 211 GGKDHVSTRVMGTYGYCAPEYAMT----GQLTKKSDVYSFGVVLLELITG 256
G T V GT Y +PE + G ++ D +S GV L E++ G
Sbjct: 226 EGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + +++VAVK ++R G + E++ ++H N+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ S G L + E F ++ G + Y H + V +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 137
Query: 182 RDFKASNILLDAEFNPKLS--DFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P+L DFG +K + +GT Y APE + +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDG 194
Query: 240 K-SDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
K +DV+S GV L ++ G ++ P E +N
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 225
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 74 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 121
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 177
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 237
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 238 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 266
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + +++VAVK ++R G + + E++ ++H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ S G L + E F ++ G + Y H + V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 182 RDFKASNILLDAEFNPKLS--DFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P+L DFG +K + +GT Y APE + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDG 195
Query: 240 K-SDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
K +DV+S GV L ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 151
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 207
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 90 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 137
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 193
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 253
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 151
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 207
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 138
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 194
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 254
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 118 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 165
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 221
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 18/230 (7%)
Query: 34 FGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR---S 90
+ K T N K ++L E++ ++G G +G V ++ +V A+K L +
Sbjct: 56 LSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 91 GNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE 150
S F+ E +++ +V L D +V E+M G L N + ++
Sbjct: 114 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 151 PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
++T L+ +H + I+RD K N+LLD + KL+DFG
Sbjct: 174 WARFYT-----AEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 225
Query: 211 GGKDHVSTRVMGTYGYCAPEYAMT----GQLTKKSDVYSFGVVLLELITG 256
G T V GT Y +PE + G ++ D +S GV L E++ G
Sbjct: 226 EGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 110 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 157
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 213
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 274 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 302
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 18/230 (7%)
Query: 34 FGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDR---S 90
+ K T N K ++L E++ ++G G +G V ++ +V A+K L +
Sbjct: 51 LSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 108
Query: 91 GNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQE 150
S F+ E +++ +V L D +V E+M G L N + ++
Sbjct: 109 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 168
Query: 151 PLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPT 210
++T L+ +H + I+RD K N+LLD + KL+DFG
Sbjct: 169 WARFYT-----AEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220
Query: 211 GGKDHVSTRVMGTYGYCAPEYAMT----GQLTKKSDVYSFGVVLLELITG 256
G T V GT Y +PE + G ++ D +S GV L E++ G
Sbjct: 221 EGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 123
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 179
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 123
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 179
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 118
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 174
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 234
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR------EFFAEVLMLSLVQHQNLVN 115
+G G + V K ++ A K + + ++ SR E EV +L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L + +L+ E +S G L D +E L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 176 DPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEY 231
+ + D K NI+L + P KL DFGLA G + + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 232 AMTGQLTKKSDVYSFGVVLLELITGRS 258
L ++D++S GV+ L++G S
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 123
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 179
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 38 KKTPNVFKY-QELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR 96
K P ++Y +E+ AT +G G +G V++ + AVK++
Sbjct: 61 KLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLE------ 110
Query: 97 EFFAEVLM-LSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
F AE LM + + +V L G +G + E + GSL L +Q L
Sbjct: 111 VFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPED 166
Query: 156 TRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAE-FNPKLSDFGLAK-LGPTG-G 212
+ G A +GLEYLH +++ D KA N+LL ++ + L DFG A L P G G
Sbjct: 167 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 213 KDHVSTR-VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
KD ++ + GT + APE + K DV+S ++L ++ G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 75 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 122
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 178
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLL-------------ELITGRSAIDNSRPSEEQNL 271
Y PE+ + +S V+S G++L E+I G+ SE Q+L
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 238
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 118
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 174
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDNSR-------------PSEEQNL 271
Y PE+ + +S V+S G++L +++ G ++ SE Q+L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 234
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 85 KQLDRSGNQG-SREFFA-EVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHF 142
K+ +S +G SRE EV +L +QH N++ L + IL+ E ++ G L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGEL---- 101
Query: 143 LDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPK---- 198
D ++E L + G+ YLH + + + D K NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIK 158
Query: 199 LSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITGRS 258
+ DFGLA G + + GT + APE L ++D++S GV+ L++G S
Sbjct: 159 IIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 55 NFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSRE-FFAEVLMLSLVQHQNL 113
+F P +G GG+G V++ + D A+K++ + +RE EV L+ ++H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 114 V---------NLIGYCADGDQRILVYEFMSNGSLEN--HFLDLPPDQEPLDWFTRMKIAG 162
V N ++ +Y M EN +++ E + + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 163 GAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK-----------LGPTG 211
A+ +E+LH +++RD K SNI + K+ DFGL L P
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 212 GKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELI 254
+ +V GT Y +PE + K D++S G++L EL+
Sbjct: 183 AYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 35 GKAKKTPNVFKYQELADATENF-NPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ 93
G A P+ + DA +F + +G G VY+ + + A+K L ++ ++
Sbjct: 33 GTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK 92
Query: 94 GSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD 153
+ E+ +L + H N++ L + LV E ++ G L + ++
Sbjct: 93 --KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK-------G 143
Query: 154 WFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILL-----DAEFNPKLSDFGLAKLG 208
+++ A + LE + + + +++RD K N+L DA K++DFGL+K+
Sbjct: 144 YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPL--KIADFGLSKI- 200
Query: 209 PTGGKDH--VSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
+H + V GT GYCAPE + D++S G++ L+ G
Sbjct: 201 ----VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 52 ATENFN-------PDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLM 104
A ENF P +G G YG V K Q+ AVK++ + N ++ L
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 105 LSLVQHQNLVNLIGYCA---DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIA 161
+S + Y A +GD + + + + SL+ + + + + KIA
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIA 142
Query: 162 GGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRV- 220
K LE+LH + VI+RD K SN+L++A K DFG++ D V+ +
Sbjct: 143 VSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGY----LVDDVAKDID 196
Query: 221 MGTYGYCAPEYAMTGQLTK-----KSDVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWA 275
G Y APE + +L + KSD++S G+ +EL R D +W
Sbjct: 197 AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-----------SWG 244
Query: 276 KPLLRDKKKFTMMADPLLEGQYPR-KGLYQALAVAGMCLQEDADSRP 321
P + K+ ++ +P Q P K + + CL++++ RP
Sbjct: 245 TPFQQLKQ---VVEEP--SPQLPADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSN 135
E +++ K+L +Q + E + L++H N+V L ++ L+++ ++
Sbjct: 49 EYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 105
Query: 136 GSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEF 195
G L F D+ + +++ + + LE + V++RD K N+LL ++
Sbjct: 106 GEL---FEDIVARE----YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKL 158
Query: 196 N---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLE 252
KL+DFGLA G+ GT GY +PE K D+++ GV+L
Sbjct: 159 KGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 253 LITG 256
L+ G
Sbjct: 217 LLVG 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 62 VGEGGYGRVYKGYIEAVD-QVVAVKQLDRSGNQGS-------REFFAEVLMLSLVQHQNL 113
+ GG G +Y V+ + V +K L SG+ + R+F AEV+ S+VQ N
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
V D I V E++ SL+ P E + + + A L YLH
Sbjct: 148 VEHTDRHGDPVGYI-VMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPA------LSYLHS 200
Query: 174 VADPPVIYRDFKASNILLDAEFNPKLSDFG-LAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
+ ++Y D K NI+L E KL D G ++++ G + GT G+ APE
Sbjct: 201 IG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG-------YLYGTPGFQAPEIV 249
Query: 233 MTGQLTKKSDVYSFGVVLLEL 253
TG T +D+Y+ G L L
Sbjct: 250 RTGP-TVATDIYTVGRTLAAL 269
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 151
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 207
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 267
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 90 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 137
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 193
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 253
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 150
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 206
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 266
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 151
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 207
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 267
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 118
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 174
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 234
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 138
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 194
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 254
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 255 IRWCLALRPXDRPTFEEIQNHPWMQDVLL 283
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 138
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 194
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 254
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 123 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 170
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 226
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 286
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 287 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 315
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 118 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 165
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 221
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 281
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 62 VGEGGYGRVYK------GYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVN 115
+G+G + V + G+ E +++ K+L +Q + E + L++H N+V
Sbjct: 12 IGKGAFSVVRRCVKLCTGH-EYAAKIINTKKLSARDHQ---KLEREARICRLLKHSNIVR 67
Query: 116 LIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVA 175
L ++ LV++ ++ G L F D+ ++++ + + LE +
Sbjct: 68 LHDSISEEGFHYLVFDLVTGGEL---FEDIVAR----EYYSEADASHCIQQILEAVLHCH 120
Query: 176 DPPVIYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
V++RD K N+LL ++ KL+DFGLA G GT GY +PE
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 233 MTGQLTKKSDVYSFGVVLLELITG 256
K D+++ GV+L L+ G
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVG 202
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 52/269 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQL--DRSGNQGS----REFFAEVLMLSLVQH--QN 112
L+G GG+G VY G + + VA+K + DR + G EV++L V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 113 LVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFT-RMKIAGGAAKG---- 167
++ L+ + D +L+ E P Q+ D+ T R + A+
Sbjct: 98 VIRLLDWFERPDSFVLILERPE------------PVQDLFDFITERGALQEELARSFFWQ 145
Query: 168 -LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYG 225
LE + + V++RD K NIL+D KL DFG L KD V T GT
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRV 201
Query: 226 YCAPEYAMTGQLTKKS-DVYSFGVVLLELITGRSAIDN------------SRPSEE-QNL 271
Y PE+ + +S V+S G++L +++ G ++ R S E Q+L
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 261
Query: 272 VTWA-------KPLLRDKKKFTMMADPLL 293
+ W +P + + M D LL
Sbjct: 262 IRWCLALRPSDRPTFEEIQNHPWMQDVLL 290
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSG--------NQGSREFFAEVLMLSLVQHQNL 113
+G G +G V+ + ++ V VK + + + + E+ +LS V+H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPD-QEPLDWFTRMKIAGGAAKGLEYLH 172
+ ++ + LV E +G F+D P EPL + ++ +A G L
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV--SAVGYLRLK 149
Query: 173 DVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
D+ I+RD K NI++ +F KL DFG A G + GT YCAPE
Sbjct: 150 DI-----IHRDIKDENIVIAEDFTIKLIDFGSAAYLERG---KLFYTFCGTIEYCAPEVL 201
Query: 233 MTGQLT-KKSDVYSFGVVLLELI 254
M + +++S GV L L+
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 38 KKTPNVFKY-QELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSR 96
K P ++Y +E+ AT +G G +G V++ + AVK++
Sbjct: 80 KLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRL------E 129
Query: 97 EFFAEVLM-LSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWF 155
F AE LM + + +V L G +G + E + GSL L +Q L
Sbjct: 130 VFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPED 185
Query: 156 TRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAE-FNPKLSDFGLAK-LGPTG-G 212
+ G A +GLEYLH +++ D KA N+LL ++ + L DFG A L P G G
Sbjct: 186 RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 213 KDHVSTR-VMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
K ++ + GT + APE + K DV+S ++L ++ G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + ++VAVK ++R G E++ ++H N+V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
++ E+ S G L + E F ++ G + Y H + + +
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSMQ---ICH 139
Query: 182 RDFKASNILLDAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P K+ DFG +K + +GT Y APE + +
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDG 196
Query: 240 K-SDVYSFGVVLLELITG 256
K +DV+S GV L ++ G
Sbjct: 197 KIADVWSCGVTLYVMLVG 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 44/227 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIG 118
L+G G YG VY Y + ++ VA+K+++R + E+ +L+ ++ ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 119 YCADGD-----QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEY 170
D + +V E +++ L+ F + P+ + T I G +
Sbjct: 93 LIIPDDLLKFDELYIVLE-IADSDLKKLF------KTPI-FLTEEHIKTILYNLLLGENF 144
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKL-------------------GPTG 211
+H+ +I+RD K +N LL+ + + K+ DFGLA+ GP
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 212 G--KDHVSTRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELIT 255
K +++ V+ T Y APE + + TK D++S G + EL+
Sbjct: 202 KNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 60 CLVGEGGYGRVYKGYIEAVDQVV--AVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLI 117
C VG G YG VYK + A+KQ++ +G S E+ +L ++H N+++L
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQ 84
Query: 118 G-YCADGDQRI-LVYEFMSNGSLENHFLDL----PPDQEPLDWFTRMKIAGGAAKGLEY- 170
+ + D+++ L++++ + H + +++P+ ++ G K L Y
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLW--HIIKFHRASKANKKPV------QLPRGMVKSLLYQ 136
Query: 171 ----LHDVADPPVIYRDFKASNILLDAEFNP-----KLSDFGLAKLGPTGGKDHVSTR-V 220
+H + V++RD K +NIL+ E P K++D G A+L + K V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 221 MGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITG 256
+ T+ Y APE + + TK D+++ G + EL+T
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + +++VAVK ++R G + E++ ++H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ S G L + E F ++ G + Y H + V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 182 RDFKASNILLDAEFNPKLS--DFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P+L FG +K + +GT Y APE + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDG 195
Query: 240 K-SDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
K +DV+S GV L ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSN 135
E ++ K+L +Q + E + L++H N+V L ++ L+++ ++
Sbjct: 38 EYAAMIINTKKLSARDHQ---KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94
Query: 136 GSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEF 195
G L F D+ ++++ + + LE + V++R+ K N+LL ++
Sbjct: 95 GEL---FEDIVAR----EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL 147
Query: 196 N---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLE 252
KL+DFGLA G+ GT GY +PE K D+++ GV+L
Sbjct: 148 KGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 253 LITG 256
L+ G
Sbjct: 206 LLVG 209
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQNLVNLIG 118
L+G G YG V + Y + +VVA+K++ R + E+ +L+ + H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 119 YCADGD----QRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---GAAKGLEYL 171
D + V +++ + F + P+ + T + I G++Y+
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLF------RTPV-YLTELHIKTLLYNLLVGVKYV 172
Query: 172 HDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLG--PTGGKDHVS------------ 217
H +++RD K +N L++ + + K+ DFGLA+ P G +
Sbjct: 173 HSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 218 -----------TRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELIT 255
T + T Y APE + + T+ DV+S G + EL+
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+ E G ++KG + D VV V ++ + SR+F E L + H N++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 122 D--GDQRILVYEFMSNGSLEN------HFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHD 173
L+ + GSL N +F+ +D +K A A+G +LH
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGTNFV--------VDQSQAVKFALDXARGXAFLHT 129
Query: 174 VADPPVIYRD-FKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYA 232
+ P+I R + ++ +D + ++S + + G+ + V PE
Sbjct: 130 LE--PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDT 187
Query: 233 MTGQLTKKSDVYSFGVVLLELIT 255
+ +D +SF V+L EL+T
Sbjct: 188 N----RRSADXWSFAVLLWELVT 206
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMG 222
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ APE T +SDV+SFGV+L E+ + G S + EE R
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 306
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
K+ T M P Y +YQ + C + RP ++V L
Sbjct: 307 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 348
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHF 142
NL+G C G +++ EF G+L +
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMG 222
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ APE T +SDV+SFGV+L E+ + G S + EE R
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 308
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
K+ T M P Y +YQ + C + RP ++V L
Sbjct: 309 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 350
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHF 142
NL+G C G +++ EF G+L +
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMG 222
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ APE T +SDV+SFGV+L E+ + G S + EE R
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 313
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
K+ T M P Y +YQ + C + RP ++V L
Sbjct: 314 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 355
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHF 142
NL+G C G +++ EF G+L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVST-RVMG 222
AKG+E+L A I+RD A NILL + K+ DFGLA+ D+V
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 223 TYGYCAPEYAMTGQLTKKSDVYSFGVVLLELIT-GRSAIDNSRPSEEQNLVTWAKPLLRD 281
+ APE T +SDV+SFGV+L E+ + G S + EE R
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 315
Query: 282 KKKFTMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSRPFMVDVVTAL 330
K+ T M P Y +YQ + C + RP ++V L
Sbjct: 316 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELVEHL 357
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQV-----VAVKQLDRSGNQGS-REFFAEV-LMLSLVQHQNLV 114
+G G +G+V + +D+ VAVK L R +E+ +++ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 115 NLIGYCAD-GDQRILVYEFMSNGSLENHF 142
NL+G C G +++ EF G+L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCA 121
+G G +G + +++VAVK ++R G + E++ ++H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 122 DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIY 181
+V E+ S G L + E F ++ G + Y H + V +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAMQ---VCH 138
Query: 182 RDFKASNILLDAEFNPKLS--DFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTK 239
RD K N LLD P+L FG +K + +GT Y APE + +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKEYDG 195
Query: 240 K-SDVYSFGVVLLELITGRSAIDNSRPSEEQNL 271
K +DV+S GV L ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
VG G +G V++ + AVK++ E F E++ + + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 120 CADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
+G + E + GSL LP D+ + G A +GLEYLH
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR- 170
Query: 177 PPVIYRDFKASNILLDAEFN-PKLSDFGLAK-LGPTG-GKDHVSTR-VMGTYGYCAPEYA 232
+++ D KA N+LL ++ + L DFG A L P G GK ++ + GT + APE
Sbjct: 171 --ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 233 MTGQLTKKSDVYSFGVVLLELITG 256
M K D++S ++L ++ G
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLD-----RSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G+G + V + Q AVK +D S + + E + +++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 116 LI-GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L+ Y +DG +V+EFM L ++ + ++ + + LE L
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 175 ADPPVIYRDFKASNILLDAEFNP---KLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPE 230
D +I+RD K +LL ++ N KL FG+A +LG +G V+ +GT + APE
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMAPE 203
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K DV+ GV+L L++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
VG G +G V++ + AVK++ E F E++ + + +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 134
Query: 120 CADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
+G + E + GSL LP D+ + G A +GLEYLH
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR- 186
Query: 177 PPVIYRDFKASNILLDAEFN-PKLSDFGLAK-LGPTG-GKDHVST-RVMGTYGYCAPEYA 232
+++ D KA N+LL ++ + L DFG A L P G GK ++ + GT + APE
Sbjct: 187 --ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 244
Query: 233 MTGQLTKKSDVYSFGVVLLELITG 256
M K D++S ++L ++ G
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 54 ENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQ--GSREFFAEVLMLSLVQHQ 111
+N+ L+G G YG VY Y + ++ VA+K+++R + E+ +L+ ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 112 NLVNLIGYCA-----DGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAG---G 163
++ L D+ +V E +++ L+ F + P+ + T +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLF------KTPI-FLTEQHVKTILYN 139
Query: 164 AAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVS------ 217
G +++H+ +I+RD K +N LL+ + + K+ DFGLA+ + H+
Sbjct: 140 LLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 218 -----------------TRVMGTYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELIT-GRS 258
T + T Y APE + + T D++S G + EL+ +S
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 259 AIDN 262
I+N
Sbjct: 257 HINN 260
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLD-----RSGNQGSREFFAEVLMLSLVQHQNLVN 115
++G+G + V + Q AVK +D S + + E + +++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 116 LI-GYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDV 174
L+ Y +DG +V+EFM L ++ + ++ + + LE L
Sbjct: 93 LLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 175 ADPPVIYRDFKASNILLDAEFNP---KLSDFGLA-KLGPTGGKDHVSTRVMGTYGYCAPE 230
D +I+RD K +LL ++ N KL FG+A +LG +G V+ +GT + APE
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMAPE 205
Query: 231 YAMTGQLTKKSDVYSFGVVLLELITG 256
K DV+ GV+L L++G
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 97 EFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSL---ENHFLDLPPDQEPLD 153
+F E+ +++ ++++ + G + D+ ++YE+M N S+ + +F L +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 154 WFTRMK-IAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGG 212
+K I Y+H+ + + +RD K SNIL+D KLSDFG ++
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--- 203
Query: 213 KDHVSTRVMGTYGYCAPEYAMTGQLTK--KSDVYSFGVVL 250
D GTY + PE+ K D++S G+ L
Sbjct: 204 -DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 30/212 (14%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQ--------LDRSGNQGSREFFAEVLMLSLVQHQN 112
L+GEG YG+V E +D ++ R G E+ +L ++H+N
Sbjct: 12 LLGEGSYGKVK----EVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 113 LVNLIG--YCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAK---G 167
++ L+ Y + + +V E+ G E LD P++ F + G + G
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKR----FPVCQAHGYFCQLIDG 121
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNPKLSDFGLAK-LGPTGGKDHVSTRVMGTYGY 226
LEYLH ++++D K N+LL K+S G+A+ L P D T G+ +
Sbjct: 122 LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAF 177
Query: 227 CAPEYA--MTGQLTKKSDVYSFGVVLLELITG 256
PE A + K D++S GV L + TG
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSN 135
E +++ K+L +Q + E + L++H N+V L ++ LV++ ++
Sbjct: 31 EYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 136 GSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEF 195
G L F D+ + +++ + + LE ++ +++RD K N+LL ++
Sbjct: 88 GEL---FEDIVARE----YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 196 N---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLE 252
KL+DFGLA G GT GY +PE K D+++ GV+L
Sbjct: 141 KGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYI 198
Query: 253 LITG 256
L+ G
Sbjct: 199 LLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 76 EAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSN 135
E +++ K+L +Q + E + L++H N+V L ++ LV++ ++
Sbjct: 31 EYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 136 GSLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEF 195
G L F D+ + +++ + + LE ++ +++RD K N+LL ++
Sbjct: 88 GEL---FEDIVARE----YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 196 N---PKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLE 252
KL+DFGLA G GT GY +PE K D+++ GV+L
Sbjct: 141 KGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYI 198
Query: 253 LITG 256
L+ G
Sbjct: 199 LLVG 202
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G+G +G+V K Y V Q VA+K + R+ + R+ E+ +L ++ Q
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 121 ADGDQRILVYEFMSNGSLENHF----------LDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
D D + V + N + NH L + F+ + A L+
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
L + +I+ D K NILL + K+ DFG + V T + + Y A
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRA 267
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITG 256
PE + + D++S G +L EL+TG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G+G +G+V K Y V Q VA+K + R+ + R+ E+ +L ++ Q
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 121 ADGDQRILVYEFMSNGSLENHF----------LDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
D D + V + N + NH L + F+ + A L+
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
L + +I+ D K NILL + K+ DFG + V T + + Y A
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRA 267
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITG 256
PE + + D++S G +L EL+TG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 23 KQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVV 82
++ + AE ++ K P +E+ E+F ++G G +G V ++ +++
Sbjct: 47 RRDKYVAEFLEWAK----PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 102
Query: 83 AVKQLDRSGNQGSRE---FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNG--- 136
A+K L++ E F E +L Q + L D + LV ++ G
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL 162
Query: 137 SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFN 196
+L + F D P+ + M +A + L Y+H RD K N+LLD +
Sbjct: 163 TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGH 213
Query: 197 PKLSDFG-LAKLGPTGGKDHVSTRVMGTYGYCAPEY--AM---TGQLTKKSDVYSFGVVL 250
+L+DFG K+ G S+ +GT Y +PE AM G+ + D +S GV +
Sbjct: 214 IRLADFGSCLKMNDDGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 271
Query: 251 LELITGRS 258
E++ G +
Sbjct: 272 YEMLYGET 279
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 33/275 (12%)
Query: 23 KQRRIAAEIRKFGKAKKTPNVFKYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVV 82
++ + AE ++ K P +E+ E+F ++G G +G V ++ +++
Sbjct: 63 RRDKYVAEFLEWAK----PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 118
Query: 83 AVKQLDRSGNQGSRE---FFAEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNG--- 136
A+K L++ E F E +L Q + L D + LV ++ G
Sbjct: 119 AMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL 178
Query: 137 SLENHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFN 196
+L + F D P+ + M +A + L Y+H RD K N+LLD +
Sbjct: 179 TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGH 229
Query: 197 PKLSDFG-LAKLGPTGGKDHVSTRVMGTYGYCAPEY--AM---TGQLTKKSDVYSFGVVL 250
+L+DFG K+ G S+ +GT Y +PE AM G+ + D +S GV +
Sbjct: 230 IRLADFGSCLKMNDDGTVQ--SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 287
Query: 251 LELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
E++ G + P ++LV ++ +++F
Sbjct: 288 YEMLYGET------PFYAESLVETYGKIMNHEERF 316
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSRE------FFAEVLMLSLVQHQNL 113
+G G G V + + VA+K + + +RE E+ +L + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTRMKIAGGAAKGLEYL 171
+ + + D + +V E M G L + + +E +F +M +A ++YL
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYL 130
Query: 172 HDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
H+ +I+RD K N+LL ++ K++DFG +K+ G+ + + GT Y A
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLA 184
Query: 229 PEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
PE + T + D +S GV+L ++G R
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSRE------FFAEVLMLSLVQHQNL 113
+G G G V + + VA+K + + +RE E+ +L + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTRMKIAGGAAKGLEYL 171
+ + + D + +V E M G L + + +E +F +M +A ++YL
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYL 130
Query: 172 HDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
H+ +I+RD K N+LL ++ K++DFG +K+ G+ + + GT Y A
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLA 184
Query: 229 PEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
PE + T + D +S GV+L ++G R
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSRE------FFAEVLMLSLVQHQNL 113
+G G G V + + VA+K + + +RE E+ +L + H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTRMKIAGGAAKGLEYL 171
+ + + D + +V E M G L + + +E +F +M +A ++YL
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYL 129
Query: 172 HDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
H+ +I+RD K N+LL ++ K++DFG +K+ G+ + + GT Y A
Sbjct: 130 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLA 183
Query: 229 PEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
PE + T + D +S GV+L ++G R
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFF--AEVLMLSLVQHQNLVNLIGY 119
+G G +G V++ + AVK++ E F E++ + + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 120 CADGDQRILVYEFMSNGSLENHFLD---LPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
+G + E + GSL LP D+ + G A +GLEYLH
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR- 184
Query: 177 PPVIYRDFKASNILLDAEFN-PKLSDFGLAK-LGPTG-GKDHVST-RVMGTYGYCAPEYA 232
+++ D KA N+LL ++ + L DFG A L P G GK ++ + GT + APE
Sbjct: 185 --ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 233 MTGQLTKKSDVYSFGVVLLELITG 256
M K D++S ++L ++ G
Sbjct: 243 MGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 132 FMSNGSLENHFLDLPPDQEPLDWFTRMKI--------AGGAAKGLEYLHDVADPPVIYRD 183
F S+G E+ L ++E D F + I + A+G+E+L + I+RD
Sbjct: 168 FASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRD 224
Query: 184 FKASNILLDAEFNPKLSDFGLAKLGPTGGKDHV---STRVMGTYGYCAPEYAMTGQLTKK 240
A NILL K+ DFGLA+ D+V TR+ + APE + K
Sbjct: 225 LAARNILLSENNVVKICDFGLAR-DIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTK 281
Query: 241 SDVYSFGVVLLELIT 255
SDV+S+GV+L E+ +
Sbjct: 282 SDVWSYGVLLWEIFS 296
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 62 VGEGGYGRVYKGYIEAVDQ-----VVAVKQLDRSGNQGS-REFFAEVLMLSLVQHQ-NLV 114
+G G +G+V + + + VAVK L + E+ +L+ + H N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 115 NLIGYCA-DGDQRILVYEFMSNGSLENHF 142
NL+G C G +++ E+ G+L N+
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSRE------FFAEVLMLSLVQHQNL 113
+G G G V + + VA+K + + +RE E+ +L + H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTRMKIAGGAAKGLEYL 171
+ + + D + +V E M G L + + +E +F +M +A ++YL
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYL 136
Query: 172 HDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
H+ +I+RD K N+LL ++ K++DFG +K+ G+ + + GT Y A
Sbjct: 137 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLA 190
Query: 229 PEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
PE + T + D +S GV+L ++G R
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVKQLDRS--GNQGSRE------FFAEVLMLSLVQHQNL 113
+G G G V + + VA+K + + +RE E+ +L + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 114 VNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTRMKIAGGAAKGLEYL 171
+ + + D + +V E M G L + + +E +F +M +A ++YL
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYL 130
Query: 172 HDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
H+ +I+RD K N+LL ++ K++DFG +K+ G+ + + GT Y A
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLA 184
Query: 229 PEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
PE + T + D +S GV+L ++G R
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G+G +G+V K Y V Q VA+K + R+ + R+ E+ +L ++ Q
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 121 ADGDQRILVYEFMSNGSLENHF----------LDLPPDQEPLDWFTRMKIAGGAAKGLEY 170
D D + V + N + NH L + F+ + A L+
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 171 LHDVADPPVIYRDFKASNILLDAEFNP--KLSDFGLAKLGPTGGKDHVSTRVMGTYGYCA 228
L + +I+ D K NILL + K+ DFG + + +R Y A
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRA 267
Query: 229 PEYAMTGQLTKKSDVYSFGVVLLELITG 256
PE + + D++S G +L EL+TG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNL-IGY 119
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFF 82
Query: 120 CADGDQRILVYEFMSNGSLENHFLDLPPDQ--EPLDWFTRMKIAGGAA----------KG 167
+ G+++ +VY N LD P+ ++R K +
Sbjct: 83 YSSGEKKDVVY--------LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMGTYGY 226
L Y+H + +RD K N+LLD + KL DFG AK G+ +VS + + Y
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--ICSRYY 188
Query: 227 CAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
APE T DV+S G VL EL+ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTR 157
E+ +L + H ++ + + D + +V E M G L + + +E +F +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 158 MKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKD 214
M +A ++YLH+ +I+RD K N+LL ++ K++DFG +K+ G+
Sbjct: 248 MLLA------VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGET 295
Query: 215 HVSTRVMGTYGYCAPEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
+ + GT Y APE + T + D +S GV+L ++G R
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 100 AEVLMLSLVQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLD--WFTR 157
E+ +L + H ++ + + D + +V E M G L + + +E +F +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 158 MKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP---KLSDFGLAKLGPTGGKD 214
M +A ++YLH+ +I+RD K N+LL ++ K++DFG +K+ G+
Sbjct: 262 MLLA------VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGET 309
Query: 215 HVSTRVMGTYGYCAPEYAM---TGQLTKKSDVYSFGVVLLELITGRSAIDNSR 264
+ + GT Y APE + T + D +S GV+L ++G R
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 111
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 112 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX-ICS 219
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
Y Y APE T DV+S G VL EL+ G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 85
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 86 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 192
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 89
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 90 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX-ICS 197
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
Y Y APE T DV+S G VL EL+ G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 96
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 97 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--IC 203
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 78
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 79 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 185
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 89
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 90 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 196
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 111
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 112 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 218
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 105
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 106 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 212
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 81
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 82 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--IC 188
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 90
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 91 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 197
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVS--YIC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 113
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 114 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 220
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 53 TENFNPDCLVGEGGYGRVYKGY-----IEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
++N++ +G+G + V + +E +++ K+L Q + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+QH N+V L + LV++ ++ G L F D+ + +++ + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVARE----FYSEADASHCIQQI 113
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
LE + +++R+ K N+LL ++ KL+DFGLA H GT
Sbjct: 114 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 170
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GY +PE +K D+++ GV+L L+ G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 53 TENFNPDCLVGEGGYGRVYKGY-----IEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
++N++ +G+G + V + +E +++ K+L Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+QH N+V L + LV++ ++ G L F D+ + +++ + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVARE----FYSEADASHCIQQI 114
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
LE + +++R+ K N+LL ++ KL+DFGLA H GT
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GY +PE +K D+++ GV+L L+ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 24/224 (10%)
Query: 45 KYQELADATENFNPDCLVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQG------SREF 98
K +E +A P L+G+GG+G V+ G+ VA+K + R+ G S
Sbjct: 24 KDREAFEAEYRLGP--LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTC 81
Query: 99 FAEVLMLSLV----QHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDW 154
EV +L V H ++ L+ + + +LV E D ++ PL
Sbjct: 82 PLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGE 138
Query: 155 FTRMKIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFN-PKLSDFGLAKLGPTGGK 213
G +++ H V++RD K NIL+D KL DFG L
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGAL----LH 191
Query: 214 DHVSTRVMGTYGYCAPEYAMTGQLTK-KSDVYSFGVVLLELITG 256
D T GT Y PE+ Q + V+S G++L +++ G
Sbjct: 192 DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 82
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 83 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVS--YIC 189
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 115
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 116 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 222
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 53 TENFNPDCLVGEGGYGRVYKGY-----IEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
++N++ +G+G + V + +E +++ K+L Q + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+QH N+V L + LV++ ++ G L F D+ + +++ + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVARE----FYSEADASHCIQQI 137
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
LE + +++R+ K N+LL ++ KL+DFGLA H GT
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 194
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GY +PE +K D+++ GV+L L+ G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 53 TENFNPDCLVGEGGYGRVYKGY-----IEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSL 107
++N++ +G+G + V + +E +++ K+L Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 108 VQHQNLVNLIGYCADGDQRILVYEFMSNGSLENHFLDLPPDQEPLDWFTRMKIAGGAAKG 167
+QH N+V L + LV++ ++ G L F D+ + +++ + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVARE----FYSEADASHCIQQI 114
Query: 168 LEYLHDVADPPVIYRDFKASNILLDAEFN---PKLSDFGLAKLGPTGGKDHVSTRVMGTY 224
LE + +++R+ K N+LL ++ KL+DFGLA H GT
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 225 GYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
GY +PE +K D+++ GV+L L+ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR----- 156
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 157 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YIC 263
Query: 223 TYGYCAPEYAMTGQ-LTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVS--YIC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 61 LVGEGGYGRVYKGYIEAVDQVVAVKQLDRSGNQGSREFFAEVLMLSLVQHQNLVNLIGYC 120
++G G +G VY+ + ++VA+K++ + +R E+ ++ + H N+V
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR----- 77
Query: 121 ADGDQRILVYEFMSNGSLENH-FLDLPPDQEPLDWFTRMKIAGGAA-------------- 165
L Y F S+G ++ +L+L D P + + A
Sbjct: 78 -------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 166 --KGLEYLHDVADPPVIYRDFKASNILLDAEFNP-KLSDFGLAKLGPTGGKDHVSTRVMG 222
+ L Y+H + +RD K N+LLD + KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVS--YIC 184
Query: 223 TYGYCAPEYAM-TGQLTKKSDVYSFGVVLLELITGR 257
+ Y APE T DV+S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 42/275 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVK--QLDRSGNQGSREFFAEVLMLS-LVQHQN-LVNLI 117
+G GG +V++ E Q+ A+K L+ + NQ + E+ L+ L QH + ++ L
Sbjct: 64 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 118 GYCADGDQRILVYEFMSNGSLE-NHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
Y DQ I Y M G+++ N +L +P + + K LE +H +
Sbjct: 123 DYEI-TDQYI--YMVMECGNIDLNSWLKKKKSIDPWERKSYWK------NMLEAVHTIHQ 173
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+++ D K +N L+ + KL DFG+A V +GT Y PE
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 237 LTKKS-----------DVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
++++ DV+S G +L + G++ + ++ K
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 277
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSR 320
+ DP E ++P V CL+ D R
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKD 214
+I + ++YLH + + +RD K N+L ++ P KL+DFG AK T +
Sbjct: 126 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 179
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
++T Y Y APE + K D++S GV++ L+ G
Sbjct: 180 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKD 214
+I + ++YLH + + +RD K N+L ++ P KL+DFG AK T +
Sbjct: 125 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 178
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
++T Y Y APE + K D++S GV++ L+ G
Sbjct: 179 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKD 214
+I + ++YLH + + +RD K N+L ++ P KL+DFG AK T +
Sbjct: 127 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 180
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
++T Y Y APE + K D++S GV++ L+ G
Sbjct: 181 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 42/275 (15%)
Query: 62 VGEGGYGRVYKGYIEAVDQVVAVK--QLDRSGNQGSREFFAEVLMLS-LVQHQN-LVNLI 117
+G GG +V++ E Q+ A+K L+ + NQ + E+ L+ L QH + ++ L
Sbjct: 20 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 118 GYCADGDQRILVYEFMSNGSLE-NHFLDLPPDQEPLDWFTRMKIAGGAAKGLEYLHDVAD 176
Y DQ I Y M G+++ N +L +P + + K LE +H +
Sbjct: 79 DY-EITDQYI--YMVMECGNIDLNSWLKKKKSIDPWERKSYWK------NMLEAVHTIHQ 129
Query: 177 PPVIYRDFKASNILLDAEFNPKLSDFGLAKLGPTGGKDHVSTRVMGTYGYCAPEYAMTGQ 236
+++ D K +N L+ + KL DFG+A V +GT Y PE
Sbjct: 130 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 237 LTKKS-----------DVYSFGVVLLELITGRSAIDNSRPSEEQNLVTWAKPLLRDKKKF 285
++++ DV+S G +L + G++ + ++ K
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKL 233
Query: 286 TMMADPLLEGQYPRKGLYQALAVAGMCLQEDADSR 320
+ DP E ++P V CL+ D R
Sbjct: 234 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKD 214
+I + ++YLH + + +RD K N+L ++ P KL+DFG AK T +
Sbjct: 119 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 172
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
++T Y Y APE + K D++S GV++ L+ G
Sbjct: 173 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 159 KIAGGAAKGLEYLHDVADPPVIYRDFKASNILLDAEFNP----KLSDFGLAKLGPTGGKD 214
+I + ++YLH + + +RD K N+L ++ P KL+DFG AK T +
Sbjct: 165 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 218
Query: 215 HVSTRVMGTYGYCAPEYAMTGQLTKKSDVYSFGVVLLELITG 256
++T Y Y APE + K D++S GV++ L+ G
Sbjct: 219 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,398,157
Number of Sequences: 62578
Number of extensions: 446533
Number of successful extensions: 3570
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1013
Number of HSP's gapped (non-prelim): 1216
length of query: 336
length of database: 14,973,337
effective HSP length: 99
effective length of query: 237
effective length of database: 8,778,115
effective search space: 2080413255
effective search space used: 2080413255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)