BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036150
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3
SV=1
Length = 92
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA---LNAAT 43
KYAVKRKAVGIW CK CGKVKAG LN A+
Sbjct: 44 KYAVKRKAVGIWGCKACGKVKAGGAYTLNTAS 75
>sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2
Length = 93
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA---LNAAT 43
KY VKRKAVGIW CK CGKVKAG +N A+
Sbjct: 44 KYGVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75
>sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC
PE=3 SV=1
Length = 92
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA---LNAAT 43
KY VKRKAVGIW CK CGKVKAG +N A+
Sbjct: 44 KYGVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75
>sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa subsp. japonica
GN=Os01g0679700 PE=1 SV=1
Length = 92
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA---LNAAT 43
K+AVKRKAVGIW CK CGKVKAG +N A+
Sbjct: 44 KFAVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75
>sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A
PE=3 SV=1
Length = 92
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 21/24 (87%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K+AVKRKAVGIW CK CGKVKAG
Sbjct: 44 KFAVKRKAVGIWGCKDCGKVKAGG 67
>sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana
GN=RPL37AB PE=3 SV=1
Length = 92
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA---LNAAT 43
KY+VKRK VGIW CK CGKVKAG +N A+
Sbjct: 44 KYSVKRKVVGIWGCKDCGKVKAGGAYTMNTAS 75
>sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain
CCE9901) GN=RPL37a PE=3 SV=1
Length = 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 19/24 (79%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
KY +KRKAVGIWSCK C K KAG
Sbjct: 44 KYGMKRKAVGIWSCKGCNKTKAGG 67
>sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3
SV=2
Length = 92
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
KY +KR+AVGIW CK C K KAG
Sbjct: 44 KYGMKRQAVGIWCCKGCNKTKAGG 67
>sp|O61462|RL37A_CRYST 60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A
PE=3 SV=3
Length = 92
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKA-GALNAATLAAFTALPA 52
K A+KR+AVGIW CK C KV A GA +T+AA T A
Sbjct: 44 KDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSA 82
>sp|Q23G98|RL37A_TETTS 60S ribosomal protein L37a OS=Tetrahymena thermophila (strain
SB210) GN=RPL37A PE=1 SV=1
Length = 103
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKA-GALNAATLAAFTA 49
K AVKR AVGIW CK C K+ A GA T A TA
Sbjct: 44 KVAVKRAAVGIWKCKPCKKIIAGGAWELTTPPAVTA 79
>sp|Q9U2A8|RL37A_CAEEL 60S ribosomal protein L37a OS=Caenorhabditis elegans GN=rpl-43
PE=3 SV=3
Length = 91
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K A+KRKA GIW+C C KV AG
Sbjct: 44 KEAMKRKATGIWNCAKCHKVVAGG 67
>sp|O17307|RL37A_SCHMA 60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3
SV=1
Length = 91
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K ++KRKA GIW CK C KV AG
Sbjct: 43 KDSLKRKAAGIWECKACKKVVAGG 66
>sp|Q97BZ3|RL37A_THEVO 50S ribosomal protein L37Ae OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl37ae PE=3 SV=1
Length = 80
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 14 KKYAVKRKAVGIWSCKYCG-KVKAGALNAA 42
KK VKR A GIW C++CG K GA N A
Sbjct: 43 KKKRVKRLAAGIWVCRHCGYKFAGGAYNPA 72
>sp|Q54UG4|RL37A_DICDI 60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A
PE=3 SV=1
Length = 91
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K AV+R +VGIW C C KV AG
Sbjct: 44 KDAVRRSSVGIWKCNGCRKVLAGG 67
>sp|Q7SZB4|RL37A_XENLA 60S ribosomal protein L37a OS=Xenopus laevis GN=rpl37a PE=3 SV=3
Length = 92
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K +KRKAVGIW C C K+ AG
Sbjct: 44 KTKMKRKAVGIWHCGSCMKIVAGG 67
>sp|O30179|RL37A_ARCFU 50S ribosomal protein L37Ae OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl37ae PE=3 SV=1
Length = 83
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 11 KRTKKYAVKRKAVGIWSCKYCG 32
K+ K AVKR GIW C++CG
Sbjct: 39 KKCGKKAVKRSGTGIWECRHCG 60
>sp|Q9YC06|RL37A_AERPE 50S ribosomal protein L37Ae OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl37ae PE=3 SV=1
Length = 86
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 18 VKRKAVGIWSCKYCGKVKAGA 38
V+R +VG+WSC+ CG AGA
Sbjct: 47 VRRVSVGVWSCRKCGNTWAGA 67
>sp|Q6FRG6|RL43_CANGA 60S ribosomal protein L43 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL43
PE=3 SV=1
Length = 92
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGALNAATLAAFTALPAAAAAL 57
K V+R A GIWSC C K AG A+T AAAA +
Sbjct: 44 KKTVRRGAAGIWSCHSCKKTVAG-------GAYTVSTAAAATV 79
>sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL43 PE=3
SV=1
Length = 92
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGALNAATLAAFTALPAAAAAL 57
K AVKR A GIW+C C K AG A+T AAAA +
Sbjct: 44 KKAVKRGAAGIWNCSSCKKTVAG-------GAYTFSTAAAATV 79
>sp|P32046|RL37A_CHICK 60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=2 SV=2
Length = 92
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 15 KYAVKRKAVGIWSCKYCGK-VKAGALNAATLAAFTALPA 52
K +KRKAVGIW C C K V GA T +A T A
Sbjct: 44 KTKMKRKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSA 82
>sp|Q9VMU4|RL37A_DROME 60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A
PE=1 SV=3
Length = 92
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
K ++KR VGIWSCK C + AG
Sbjct: 44 KDSMKRAVVGIWSCKRCKRTVAGG 67
>sp|A5UNQ7|RL37A_METS3 50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 18 VKRKAVGIWSCKYCGKVKAGA 38
VKR+A GIW C+ CG V G
Sbjct: 46 VKRQAAGIWKCRKCGAVFTGG 66
>sp|O61598|RL37A_OSTOS 60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a
PE=3 SV=3
Length = 91
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 15 KYAVKRKAVGIWSCKYCGK-VKAGALNAATLAAFT 48
K A++R AVGIW+C C K V GA T+AA T
Sbjct: 44 KDAMRRGAVGIWNCSKCKKTVAGGAYVYGTVAAAT 78
>sp|Q9V202|RL37A_PYRAB 50S ribosomal protein L37Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl37ae PE=3 SV=1
Length = 83
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGA 38
+ AV+R + GIW CK CG + AG
Sbjct: 43 RRAVRRISTGIWQCKKCGAIFAGG 66
>sp|C6A452|RL37A_THESM 50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rpl37ae PE=3 SV=1
Length = 85
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
Query: 15 KYAVKRKAVGIWSCKYCGKVKAGALNAATLAAFTALPAAAAALL 58
+ AV+R + GIW C+ CG AT A LPA A +
Sbjct: 43 RKAVRRISTGIWQCQKCG---------ATFAGGAYLPATPAGRI 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.125 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,806,867
Number of Sequences: 539616
Number of extensions: 530315
Number of successful extensions: 2768
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2714
Number of HSP's gapped (non-prelim): 56
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)