BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036158
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 227 bits (578), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 151/206 (73%)
Query: 20 RNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGL 79
+N+VLVGRTGNGKS+T N++LG + FKSK + GVT CEM R ++DG ++NVIDTPGL
Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGL 65
Query: 80 FDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY 139
DS + +S EI+ C+ M ++GIHAVL+V S R R S+EE + ++ L+ +FG +I DY
Sbjct: 66 CDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDY 125
Query: 140 MIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGK 199
IVVFTGGD+LE++D+TL+DY CP+ L ++L+LC R VLFDNK+KD K+ EQV +
Sbjct: 126 CIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGRKVLFDNKSKDEKKKVEQVKQ 185
Query: 200 LLSLVNSVIVQNGGQPYTDEIFAELK 225
LL+ V +V Q GG PYT ++ ++K
Sbjct: 186 LLARVENVGEQTGGIPYTYQLHRKIK 211
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 146/205 (71%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
N+VLVGRTGNGKSAT NSI+ + FKSK SSGVT C + + +G ++NVIDTPGLF
Sbjct: 44 NIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLF 103
Query: 81 DSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYM 140
D S +EF+ KEIVKC+ + G+HAVL+V SVR R S+EE + L+ LFG KI DY+
Sbjct: 104 DLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFGSKIVDYL 163
Query: 141 IVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKL 200
IVVFTGGD LED+ TLEDYLG P LK +L LC R +LFDNKTKD K+T+QV +L
Sbjct: 164 IVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLILCGQRMILFDNKTKDDEKKTKQVHEL 223
Query: 201 LSLVNSVIVQNGGQPYTDEIFAELK 225
L L++ V QN PYTDE++ +K
Sbjct: 224 LKLIDLVRKQNNNIPYTDEMYHMIK 248
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 129/207 (62%), Gaps = 6/207 (2%)
Query: 15 PSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVI 74
P N + +VLVG+TG GKSAT NSILG++ F S + +TK CE + + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGK 134
DTPG+FD+ + SKEI++CI +T G HA+L+V + R++EEE A + +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 135 KISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRT 194
+ +MI++FT D+L D + L DYL RE P+ +++++ + +R +NK A++
Sbjct: 144 RARSFMILIFTRKDDLGDTN--LHDYL-REAPEDIQDLMDIFGDRYCALNNKATG-AEQE 199
Query: 195 EQVGKLLSLVNSVIVQNGGQPYTDEIF 221
Q +LL L+ V+ +N YT+ ++
Sbjct: 200 AQRAQLLGLIQRVVRENKEGCYTNRMY 226
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 127/200 (63%), Gaps = 6/200 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+T NSILG++AF S + +TK CE + + DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFD 91
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
+ KEI +C+ +T G HA+L+V + ++ EE A L S+F KK +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPL-GCYTVEEHKATRKLLSMFEKKARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKLL 201
++ T D+LED D + +YL P+ L+E++ NR LF+NK A++ EQ +LL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-ETAPEVLQELIYEFRNRYCLFNNKASG-AEQEEQKRQLL 206
Query: 202 SLVNSVIVQNGGQPYTDEIF 221
+LV S++ +NGG+ +T++++
Sbjct: 207 TLVQSMVRENGGKYFTNKMY 226
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
+VLVG+TG+GKSATAN+ILG+ F S+ + VTK C+ + + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQ-KASREWQGRDLLVVDTPGLFD 69
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
+ + KEI +CI + G HA+++V + R++EEE + +++++FGK +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDT-AKRTEQVGKL 200
++FT +ELE ++ D++ + LK I++ C NRC F N K + A++ QV +L
Sbjct: 129 ILFTRKEELE--GQSFHDFIA-DADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQEL 185
Query: 201 LSLVNSVIVQNGGQPYTDEIF 221
+ L+ ++ N G ++D+I+
Sbjct: 186 VELIEKMVQCNEGAYFSDDIY 206
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
+VL+G+TG GKS+T NSILG++ F S + +TK CE +R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
+ +EI + + +T G HA+L+V + R++ EE A + +FGK+ +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKLL 201
++ T D+LED D + +YL + PK +E++ NR LF+N+ A++ EQ +LL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-EKAPKFFQEVMHEFQNRYCLFNNRASG-AEKEEQKMQLL 206
Query: 202 SLVNSVIV 209
+LV S+ +
Sbjct: 207 TLVQSMFL 214
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 128/231 (55%), Gaps = 16/231 (6%)
Query: 1 MGGRVIDADSK--------PTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSS 52
MGGR + D + S R L+LVGRTG GKSAT NSILG+R F S+ G++
Sbjct: 1 MGGRKMATDEENVYGLEENAQSRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGAT 60
Query: 53 GVTKTCEMQRTMLKDGQVVNVIDTPGLFDSS-ADSEFVSKEIVKCIGMTKDGIHAVLVVF 111
VT+ C + D V V+DTP +F S + ++ +E C ++ G HA+L+V
Sbjct: 61 SVTRACTTG-SRRWDKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVT 119
Query: 112 SVRNRFSEEEGAAIHILESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKE 171
+ RF+ ++ A+ + +FG+ + +M++VFT ++L +L DY+ + L+E
Sbjct: 120 QL-GRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGG--SLHDYVSNTENRALRE 176
Query: 172 ILQLCDNRCVLFDNKTKDTAKRTE-QVGKLLSLVNSVIVQNGGQPYTDEIF 221
++ C R FDN+ T + E QV +LL +V +++++ G Y++E++
Sbjct: 177 LVAECGGRVCAFDNRA--TGREQEAQVEQLLGMVEGLVLEHKGAHYSNEVY 225
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 10/209 (4%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPG-- 78
N+VLVGR+G GKSAT NSILG F S+ + VTKT + R DGQ V V+DTP
Sbjct: 440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFN 498
Query: 79 -LFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKIS 137
+ D D + +E+ +C+ + G ++VF + RF+EE+ A+ LE++FG +
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQV 197
Y I++FT ++L + LED++ K L+ I + C R F+NK A+ T QV
Sbjct: 558 KYAIMLFTRKEDLGAGN--LEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQAQET-QV 614
Query: 198 GKLLSLVNSVIVQNG--GQPYTDEIFAEL 224
LL+ VN + ++G G P+T E ++L
Sbjct: 615 KALLTKVNDLRKESGWSGYPHTQENVSKL 643
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
Query: 19 ERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPG 78
E L+L+G+ +GKSAT N+ILGK FKSK V K C+ + +L++ +VV VIDTP
Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPD 68
Query: 79 LFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISD 138
LF S A +E + I C+ ++ +HA+L+V ++ F+ E+ ++ +FG +
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARR 127
Query: 139 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVG 198
++I+VFT + + D+ L+D++ E KPLK+++Q + R +F+NKT ++ QV
Sbjct: 128 HIIIVFT--RKDDLGDDLLQDFI--EKNKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVL 183
Query: 199 KLLSLVNSVIVQNGGQPY 216
+LL V S++ NGG PY
Sbjct: 184 ELLRKVESLVNTNGG-PY 200
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 4 RVIDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRT 63
R + + +P E ++LVG+ G GKSA NSILG++AF++ VT++ +
Sbjct: 232 RQLQSTGPEQNPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESR 291
Query: 64 MLKDGQVVNVIDTPGLFD-SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEG 122
+ + V++ID P + + DSE V K I G HA L+V + +++ +
Sbjct: 292 SWRKKK-VSIIDAPDISSLKNIDSE-VRKHIC-------TGPHAFLLVTPL-GFYTKNDE 341
Query: 123 AAIHILESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVL 182
A + +++ FG+K +YMI++ T ++L D D L+ +L R K L ++Q C NR
Sbjct: 342 AVLSTIQNNFGEKFFEYMIILLTRKEDLGDQD--LDTFL-RNSNKALYGLIQKCKNRYSA 398
Query: 183 FDNK-TKDTAKRTEQVGKLLSLVNSVIVQNGGQ 214
F+ + T + +R Q +LL + S++ QNG +
Sbjct: 399 FNYRATGEEEQR--QADELLEKIESMVHQNGNK 429
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 119/202 (58%), Gaps = 6/202 (2%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
L+LVGRTG GKSAT NSILG++ F S+ G+ VT++C + M Q V V+DTP +F
Sbjct: 5 RLILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQ-VEVVDTPDIF 63
Query: 81 DSS-ADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY 139
S ++ E +C ++ G HA+L+V + RF+ ++ A+ ++ LFGK++
Sbjct: 64 SSEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMAR 122
Query: 140 MIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGK 199
+VVFT ++L + +L+DY+ + L++++ C R +N+ + +R Q +
Sbjct: 123 TVVVFTRQEDLAGD--SLQDYVHCTDNRALRDLVAECGGRVCALNNRATGS-EREAQAEQ 179
Query: 200 LLSLVNSVIVQNGGQPYTDEIF 221
LL +V ++ ++GG Y++E++
Sbjct: 180 LLGMVACLVREHGGAHYSNEVY 201
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 121/213 (56%), Gaps = 5/213 (2%)
Query: 10 SKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQ 69
+K S E ++LVG+TG GKSA NSIL K+AF+SK GS +TKTC + + +
Sbjct: 13 AKGQCASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNRE 72
Query: 70 VVNVIDTPGLFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILE 129
+V +IDTP +F E + KE+ +C ++ G H +L+V + R++ ++ A ++
Sbjct: 73 IV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVK 130
Query: 130 SLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKD 189
+FG+ + IV+FT ++L N +L DY+ K L +++ C R F+N+ +
Sbjct: 131 EIFGEDAMGHTIVLFTHKEDL--NGGSLMDYMHDSDNKALSKLVAACGGRICAFNNRA-E 187
Query: 190 TAKRTEQVGKLLSLVNSVIVQNGGQPYTDEIFA 222
+ + +QV +L+ + ++++ G YT+ +++
Sbjct: 188 GSNQDDQVKELMDCIEDLLMEKNGDHYTNGLYS 220
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++LVG+TG GKSAT NSILG+ F+SK + VT+TC++ +T +G+ V V+DTP +F+
Sbjct: 30 IILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTWNGRKVLVVDTPSIFE 88
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
S AD++ + K I C ++ G H +L+V + RF+ ++ AI ++ +FG +++
Sbjct: 89 SQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIRKVKEVFGTGAMRHVV 147
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKLL 201
++FT ++L + L+DY+ LK++++ C+ R F+N +R +Q +LL
Sbjct: 148 ILFTHKEDL--GGQALDDYVANTDNCSLKDLVRECERRYCAFNNWGSVEEQRQQQ-AELL 204
Query: 202 SLVNSVIVQNGGQPYTDEIF 221
+++ + + G +++++F
Sbjct: 205 AVIERLGREREGSFHSNDLF 224
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 7/200 (3%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
L+LVG+TG+GKSAT NSILG++AF+SK + VT T + + T +G+ + VIDTP +F
Sbjct: 105 QLLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIF 163
Query: 81 DSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYM 140
E +K+I C + G HAVL+V V R++ E+ A L+ +FG I Y
Sbjct: 164 SPQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYT 220
Query: 141 IVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKL 200
I+VFT ++L + +LE+Y+ K L + C+ R F+NK + + Q+ KL
Sbjct: 221 ILVFTRKEDLAEG--SLEEYIQENNNKSLDVLDVACERRHCGFNNKAQGDEQEA-QLKKL 277
Query: 201 LSLVNSVIVQNGGQPYTDEI 220
+ V ++ +N G YT E
Sbjct: 278 MEEVELILWENEGHCYTMEF 297
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 8/190 (4%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
N++L+GR+G GKSAT N+ILG+ AF S+ + VT + + + L D Q V V+DTP
Sbjct: 477 NIILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPSFI 535
Query: 81 DSSA---DSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKIS 137
+ D + +EI C+ + ++G+ ++V + RF++E+ + LE+ F + I
Sbjct: 536 QTPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENIM 594
Query: 138 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQV 197
YMIV+FT ++L D D L DY K LK+IL+ C+ R F+NK + T QV
Sbjct: 595 KYMIVLFTRKEDLGDGD--LHDYTNNTKNKALKKILKKCNGRVCAFNNKETGEDQET-QV 651
Query: 198 GKLLSLVNSV 207
LL + NS+
Sbjct: 652 KGLLKIANSL 661
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
L+L+G+ G GKSAT N+ILGK F+SK VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
S + SE + + +C+ + D H VL++ + ++EE+ I + G K +MI
Sbjct: 110 SLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMI 168
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQ-LCDNRCVLFDNKTKDTAKRTEQVGKL 200
VVFT DEL ++++L +Y+ E + LKE+++ + RC F+NK D +R QV KL
Sbjct: 169 VVFTREDEL--DEDSLWNYI--ESKESLKELIKNIGSRRCCTFNNKA-DKKQRELQVFKL 223
Query: 201 LSLVNSVIVQNGGQPYTDEIFAE 223
L + +++++ +PY + + E
Sbjct: 224 LDAIELLMMES-PEPYFEPLKME 245
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 4 RVIDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRT 63
++ D P P E ++L+G+ G GKSA NSILGK+ FK++ +
Sbjct: 272 QITGPDCDPDMP---ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHS 328
Query: 64 MLKDGQVVNVIDTPGLFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGA 123
+ G+ V +ID+P + D V T G HA L+V + + ++
Sbjct: 329 RVWQGKKVLIIDSPEISSWKLDESAVKNH-------TFPGPHAFLLVTPLGSSLKSDDD- 380
Query: 124 AIHILESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLF 183
I++ +FG+K + + IV+FT ++ E D+ L+ + L + Q R +F
Sbjct: 381 VFSIIKRIFGEKFTKFTIVLFTRKEDFE--DQALDKVIKEN--DALYNLTQKFGERYAIF 436
Query: 184 DNKTKDTAKRTEQVGKLLSLVNSVIVQNGGQP 215
N + QVGKLLS + ++ + +P
Sbjct: 437 -NYRASVEEEQSQVGKLLSQIEKMVQCHSNKP 467
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
L+LVG+TG+GKSAT NSILG++ F+SK + VT + L +G+ + VIDTP +
Sbjct: 104 QLLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDIL 162
Query: 81 DSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYM 140
E +K+I C + G HAVL+V V R++ E+ A L+ +FG I Y
Sbjct: 163 SPQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYT 219
Query: 141 IVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKL 200
I+VFT +EL + +LE+Y+ K L + C+ R F+N+ + + Q+ KL
Sbjct: 220 ILVFTRKEELAEG--SLEEYIKENNNKTLDALDVACERRHCGFNNRAQGDEQEA-QLQKL 276
Query: 201 LSLVNSVIVQNGGQPYTDEI 220
+ + S++ +N G YT E+
Sbjct: 277 MEEIESILWENEGHCYTMEL 296
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 107 bits (266), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 122/201 (60%), Gaps = 5/201 (2%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
++LVG++G GKSAT NSIL + AF+S+ VT+T + + T +G+ + V+DTP +F
Sbjct: 28 RILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIF 86
Query: 81 DSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYM 140
+S A ++ + K+I C + G H +L+V + RF+ E+ A+ +++ +FG + +M
Sbjct: 87 ESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHM 145
Query: 141 IVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKL 200
IV+FT ++LE +++LE+++ + L+ + Q C R F+N+ ++ Q+ +L
Sbjct: 146 IVLFTRKEDLE--EKSLEEFVTHTDNRSLRSLTQECGRRYCAFNNRASGEEQQG-QLAEL 202
Query: 201 LSLVNSVIVQNGGQPYTDEIF 221
++LV + + G +++++F
Sbjct: 203 MALVRRLEQECEGSFHSNDLF 223
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 17 NGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDT 76
+G ++LVG++G GKSAT NSIL + AF+S+ VT+T + + +G+ V+DT
Sbjct: 42 SGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDT 100
Query: 77 PGLFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKI 136
P +F+S ++ + K+I C M G H +L+V + R++ E+ A+ +++ +FG +
Sbjct: 101 PPIFESKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGV 159
Query: 137 SDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQ 196
YMIV+FT ++L DE+LE+++ L ++Q C R F+NK ++ Q
Sbjct: 160 MRYMIVLFTHKEDLA--DESLEEFVTHTGNLDLHRLVQECGRRYCAFNNKASGEEQQG-Q 216
Query: 197 VGKLLSLVNSVIVQNGGQPYTDEIF 221
+ +L++LV + ++ G +++++F
Sbjct: 217 LAELMALVRRLEQEHEGSFHSNDLF 241
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 126/208 (60%), Gaps = 7/208 (3%)
Query: 16 SNGERNL--VLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNV 73
++G R L +LVG++G GKSAT NS+L + AF+S+ VT+T + + T +G+ + V
Sbjct: 17 TSGSRPLRILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILV 75
Query: 74 IDTPGLFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFG 133
+DTP +F+S A ++ + K+I C + G H +L+V + RF+ E+ A+ +++ +FG
Sbjct: 76 VDTPPIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFG 134
Query: 134 KKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKR 193
+ +MIV+FT ++L +++LE+++ + L+ ++Q C R F+N+ ++
Sbjct: 135 VGVMRHMIVLFTRKEDL--AEKSLEEFVTHTDNRSLRSLVQECGRRYCAFNNRASGEEQQ 192
Query: 194 TEQVGKLLSLVNSVIVQNGGQPYTDEIF 221
Q+ +L++LV + + G +++++F
Sbjct: 193 G-QLAELMALVRRLEQECEGSFHSNDLF 219
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
N++L+GR+G GKSAT N+ILG+ AF S+ + VT + R L D Q + V+DTP L
Sbjct: 476 NIILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLN 534
Query: 81 DSSA---DSEFVSKEIVKCIGMT-KDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKI 136
S + + KEI +C+ ++G+ ++VF + RF++E+ A + LE+ F + I
Sbjct: 535 QMSGTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENI 593
Query: 137 SDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQ 196
YMIV+FT ++L D D L D+ K LK I + C R F+NK + T Q
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIFKKCKGRVCAFNNKETGEDQET-Q 650
Query: 197 VGKLLSLVNSV 207
V LL++ N +
Sbjct: 651 VKALLTIANDL 661
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 113/196 (57%), Gaps = 9/196 (4%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
L+L+G+ G GKSAT N+ILGK F+S+ VTK C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
S E + + +C+ + D VL++ + +EE+ I ++ +FG + +MI
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMI 167
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQ-LCDNRCVLFDNKTKDTAKRTEQVGKL 200
VVFT DEL ++TL++++ E K LK++++ + RC F+NK D ++ QV +
Sbjct: 168 VVFTREDEL--GEDTLQNHI--ESKKYLKKLIENIGSQRCCAFNNKA-DKKQQELQVSQF 222
Query: 201 LSLVNSVIVQNGGQPY 216
L + +++++ G +
Sbjct: 223 LDAIEFLMMESPGTYF 238
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 19 ERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPG 78
E ++L+G+ G GKSA NSILGK+ FK++ + L + + +ID+P
Sbjct: 283 ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQKKFLIIDSPE 342
Query: 79 LFDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISD 138
+ D V + T G HA L+V + + + + I++ +FG+K
Sbjct: 343 ISSWKLDESDVKEH-------TFPGPHAFLLVTPLGSSLKSGD-SVFSIIKRIFGEKFIK 394
Query: 139 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVG 198
+ I++FT ++ E D D +E L ++Q+ + R +F N + QVG
Sbjct: 395 FTIILFTRKEDFEGQD---LDTFTKE-NDALCNLIQIFEGRYAVF-NYRATVEEEQSQVG 449
Query: 199 KLLSLVNSVIVQNGGQP 215
KLLS + SV+ + +P
Sbjct: 450 KLLSQIESVVQHHNNKP 466
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 113/200 (56%), Gaps = 6/200 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
L+L+G+TG+GKSAT NSILG+ F+SK + VTKT + +R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
E V+ I + I ++ G HAVL+V + RF++E+ + L+ +FG + + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKLL 201
+VFT ++L +LEDY+ + L + R F+N+ + + Q+ +L+
Sbjct: 160 LVFTRKEDLAGG--SLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEA-QLRELM 216
Query: 202 SLVNSVIVQNGGQPYTDEIF 221
V +++ +N G Y+++ +
Sbjct: 217 EKVEAIMWENEGDYYSNKAY 236
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
L+LVG++G+GKSAT NSILG+R F+SK + VT+ + Q +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQ-QGCRAWEGRELQVIDTPDILS 154
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDYMI 141
A ++ + + + +AVL+V + RF+EE+ LE +FGK I I
Sbjct: 155 PWAAGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGILARTI 213
Query: 142 VVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTEQVGKLL 201
+VFT ++L + +LE YL + L ++ +C R F+NK D A++ Q+ +L+
Sbjct: 214 LVFTRKEDL--DGRSLETYLRETDNRALAKLDDVCSRRHCGFNNK-GDGAEQETQLRELM 270
Query: 202 SLVNSVIVQNGGQPYT 217
V V+ + G Y+
Sbjct: 271 RHVEGVLKEPEGCAYS 286
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRT------MLKDGQ----V 70
NL + GRT +GKS+ N +LG F S VTK C + R+ M + GQ
Sbjct: 10 NLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQ 69
Query: 71 VNVIDTPGLFDSSADSEFVSKEIVKCI--GMTKDGIH-AVLVVFSVRNRFSEEEGAAIHI 127
+ V+DTPG S + V +E+ K + ++G+H A+LV + F +E A+ +
Sbjct: 70 IQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQL 129
Query: 128 LESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKT 187
++ L G +YM V+FT +ELE+ + E+YL RE L +L +R + +
Sbjct: 130 MQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTLLTLLDSVQHRYIFLSGRG 188
Query: 188 KDTAKRTEQVGKLLSLVNSVIVQNGGQ 214
EQ K+L + I +N Q
Sbjct: 189 NLC---NEQRIKILERIMEFIKENHFQ 212
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRT------MLKDGQ----V 70
NL L G T +GKS+ N ILG F S VT+ C + R+ M + GQ
Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQ 68
Query: 71 VNVIDTPGLFDSSADSEFVSKEIVKCIGMT--KDGIHAVLVVFSVRNRFS-EEEGAAIHI 127
V V+DTPG S + V +E+ + + ++G+H L+V +EE + + +
Sbjct: 69 VQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQM 128
Query: 128 LESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKT 187
++ L G +Y ++FT +++E+ ++YL RE + L ++L +R + +
Sbjct: 129 IQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLKLLNSIQHRYIF---QY 184
Query: 188 KDTAKRTEQVGKLLSLVNSVIVQNGGQPYT 217
K +EQ K+L + + +N Q T
Sbjct: 185 KKGNSLSEQRLKILERIIEFVKENCYQVLT 214
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRT------MLKDGQ----V 70
NL ++G+T +GKS+ N +LG F S+ VTK C + R+ M + G
Sbjct: 9 NLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQ 68
Query: 71 VNVIDTPGLFDSSADSEFVSKEIVKCI--GMTKDGIHAVLVVFSVRNRFSEEEGA-AIHI 127
+ V+DTPG S + V +E+ K + ++G+H L+V F +E + ++ +
Sbjct: 69 IQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQL 128
Query: 128 LESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKT 187
++ L G +Y ++FT +++++ + E+YL E L +L +R + +
Sbjct: 129 IQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYLC-EASDALLTLLNSVQHRHIFLYERG 187
Query: 188 KDTAKRTEQVGKLLSLVNSVIVQNGGQ 214
+EQ K+L + I +N Q
Sbjct: 188 NSW---SEQRIKILERIMEFIKENHFQ 211
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 13 TSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCE----------MQR 62
T P+ NL L G T +GKS+ N +LG F S VT C M+R
Sbjct: 2 TDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRR 61
Query: 63 TMLKDGQVVNVIDTPGLFDSSADSEFVSKEIVKCIGMT--KDGIHAVLVVFSVRNRFSEE 120
L+ V V+DTPG S ++V +E+ + + + G+H L+V F +
Sbjct: 62 GGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQ 121
Query: 121 EGA-AIHILESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNR 179
E + +++ L G +Y ++FT +++E+ T + YL E LK +L ++
Sbjct: 122 EVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL-HEASDTLKTLLNSIQHK 180
Query: 180 CVLFDNKTKDTAKRTEQVGKLLSLVNSVIVQNGGQPYT 217
V K K EQ K+L + I +N Q T
Sbjct: 181 YVFQYKKGKSL---NEQRMKILERIMEFIKENCYQVLT 215
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 13 TSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVN 72
TS S+ + + LVG TG+G++ATAN+I GK+ +S ++ VT C+ + D + N
Sbjct: 875 TSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPINN 934
Query: 73 VIDTPG 78
+IDTPG
Sbjct: 935 MIDTPG 940
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 19 ERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPG 78
E N++L+GRTG GKS+T N++ G SS + + +G +N+IDTPG
Sbjct: 151 ECNVLLLGRTGVGKSSTLNTVFG---IDIPVHSSESCTQDPFTYSRVVNGFKLNIIDTPG 207
Query: 79 LFDSSAD----------SEFVSKEIVKCIGMTK-------DGIHAVLVVFSVRNRFSEEE 121
DS + ++S + + C+ + DG H +++ N+F+E+
Sbjct: 208 FLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVI-----NQFTEKL 262
Query: 122 GAAI 125
G +
Sbjct: 263 GPQL 266
>sp|Q89A14|DER_BUCBP GTPase Der OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=der PE=3 SV=1
Length = 462
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
+ L+GRT GKS N + G R + + +T+ + ++ + ++V +IDTPG+ +
Sbjct: 5 IALIGRTNVGKSTLFNKLTGNRNDALASNHASLTRDRKHGFIIVNNTKIV-LIDTPGINE 63
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKI 136
S + KEI + + + V +V S RN+ ++ I +L F KKI
Sbjct: 64 DSKKKISLDKEIFEQVKFSIKQADLVCLVVSARNKLMHKDVEIIEMLRK-FQKKI 117
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G+TG GKSAT NSI G+ ++ A G + E+ T+ G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVR-----NRFSEEEGAAIHILESLFGKKI 136
S+ S +++I+ I +V++ R R+S + + + ++ +FG I
Sbjct: 227 LSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYS--DFSLLQLITEIFGAAI 284
Query: 137 SDYMIVVFT 145
I+V T
Sbjct: 285 WLNTILVMT 293
>sp|A8MIS4|ENGB_ALKOO Probable GTP-binding protein EngB OS=Alkaliphilus oremlandii
(strain OhILAs) GN=engB PE=3 SV=1
Length = 208
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 5 VIDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTM 64
VI A + P NG + L GR+ GKS+T N+IL +R + S G T+T
Sbjct: 9 VISAVAPKQYPENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINF---- 64
Query: 65 LKDGQVVN----VIDTPG 78
+VN ++D PG
Sbjct: 65 ----YIVNNEFHIVDLPG 78
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G+ G GKS+T NS++G++ + + + + RTM G +N+IDTPGL +
Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM--GGFTINIIDTPGLVE 96
Query: 82 SSADSEFVSKEIVKCIG--MTKDGIHAVLVVFSVR-NRFSEEEGAAIHILESLFGKKISD 138
+ +V+ + ++ I + I +L V + R E + + + FGK+I
Sbjct: 97 AG----YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWC 152
Query: 139 YMIVVFTGGDELEDNDETLEDYLGRECPKPLKEI 172
++V T ++ + E + + LK I
Sbjct: 153 KTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTI 186
>sp|C5D3F4|DER_GEOSW GTPase Der OS=Geobacillus sp. (strain WCH70) GN=der PE=3 SV=1
Length = 436
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 33/192 (17%)
Query: 24 LVGRTGNGKSATANSILG-KRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFDS 82
L+GR GKS+ N+ILG +R S +G T+ + T +++GQ +IDT G+
Sbjct: 180 LIGRPNVGKSSLVNAILGEERVIVSDI--AGTTRDA-VDTTFVREGQEYVIIDTAGMRKR 236
Query: 83 SADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY--- 139
E K V + VLVV + EEG I+E KKI+ Y
Sbjct: 237 GKIYESTEKYSVLRALKAIERSDVVLVVLNA------EEG----IIEQ--DKKIAGYAHE 284
Query: 140 ----MIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTE 195
+I+V D +E +D+TL ++ + +++ D ++F +AK +
Sbjct: 285 AGRGVIIVVNKWDAIEKDDKTLIEF-----ERKIRDHFPFLDYAPIIF-----VSAKTKQ 334
Query: 196 QVGKLLSLVNSV 207
++ KLL LV V
Sbjct: 335 RLHKLLPLVRMV 346
>sp|Q9CGE5|ENGB_LACLA Probable GTP-binding protein EngB OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=engB PE=3 SV=1
Length = 195
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 6 IDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTML 65
I A SK P N + L GR+ GKS+ N++L ++ F +G G T+
Sbjct: 12 ISAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNI-- 69
Query: 66 KDGQVVNVIDTPGLFDSSADSEFVSK--EIVKCIGMTKDGIHAVLVVFSVRNRFSEEE 121
D Q ++ +D PG + + K ++++ T++ + AV+ + +R+ SE++
Sbjct: 70 -DDQ-LHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSEDD 125
>sp|Q1Q7V4|MNME_PSYCK tRNA modification GTPase MnmE OS=Psychrobacter cryohalolentis
(strain K5) GN=mnmE PE=3 SV=2
Length = 478
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 21 NLVLVGRTGNGKSATANSILGK-RAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGL 79
++VL GR GKS+ N + G+ RA + +G T+ +Q T++ +G +++ DT GL
Sbjct: 232 HVVLAGRPNAGKSSLLNRLAGQERAIVTDV--AGTTRDT-LQETVVLNGLTLHLTDTAGL 288
Query: 80 FDSSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY 139
++ E + E + D +L+V+ V R EEE + + E LFG+
Sbjct: 289 RETEDTVERIGIERARTAIAQAD---MLLMVYDV-TRDLEEESTPLQLAEQLFGELPEAK 344
Query: 140 MIVVFTGGDELEDNDETLE 158
+++ +L +N+ + E
Sbjct: 345 RLLIIANKSDLLNNNSSKE 363
>sp|Q02Z21|ENGB_LACLS Probable GTP-binding protein EngB OS=Lactococcus lactis subsp.
cremoris (strain SK11) GN=engB PE=3 SV=1
Length = 195
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 6 IDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTML 65
I A SK P N + L GR+ GKS+ N++L ++ F +G G T+
Sbjct: 12 ISAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNI-- 69
Query: 66 KDGQVVNVIDTPGLFDSSADSEFVSK--EIVKCIGMTKDGIHAVLVVFSVRNRFSEEE 121
D Q ++ +D PG + + K ++++ T++ + AV+ + +R+ SE++
Sbjct: 70 -DDQ-LHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSEDD 125
>sp|Q9L6G1|ENGB_LACLM Probable GTP-binding protein EngB OS=Lactococcus lactis subsp.
cremoris (strain MG1363) GN=engB PE=3 SV=1
Length = 195
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 6 IDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTML 65
I A SK P N + L GR+ GKS+ N++L ++ F +G G T+
Sbjct: 12 ISAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNI-- 69
Query: 66 KDGQVVNVIDTPGLFDSSADSEFVSK--EIVKCIGMTKDGIHAVLVVFSVRNRFSEEE 121
D Q ++ +D PG + + K ++++ T++ + AV+ + +R+ SE++
Sbjct: 70 -DDQ-LHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSEDD 125
>sp|P25342|CDC10_YEAST Cell division control protein 10 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC10 PE=1 SV=1
Length = 322
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAG----SSGVTKTCEMQ---RTMLKDGQV--V 71
N+++VG++G GKS N++ S G + VTKT EM+ T+++D +
Sbjct: 34 NIMVVGQSGLGKSTLINTLFASHLIDSATGDDISALPVTKTTEMKISTHTLVEDRVRLNI 93
Query: 72 NVIDTPGLFDSSADSEFVSKEIVKCI 97
NVIDTPG F D+ + IVK I
Sbjct: 94 NVIDTPG-FGDFIDNSKAWEPIVKYI 118
>sp|Q92C22|RSGA1_LISIN Putative ribosome biogenesis GTPase RsgA 1 OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=rsgA1 PE=3 SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 2 GGRVIDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKA----GSSGVTKT 57
G ++AD KP S LVL+G +G GKS+ NS+ G K+ S G T
Sbjct: 172 GFEALEADLKPNS------TLVLLGSSGVGKSSFINSLAGADLMKTSEIREDDSKGKHTT 225
Query: 58 CEMQRTMLKDGQVVNVIDTPGL 79
+ +L +G + +IDTPG+
Sbjct: 226 THREMHLLANGWI--IIDTPGM 245
>sp|Q9SLF3|TC132_ARATH Translocase of chloroplast 132, chloroplastic OS=Arabidopsis
thaliana GN=TOC132 PE=1 SV=1
Length = 1206
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G++G GKSAT NSI + F + A G + +++ L G V VIDTPGL
Sbjct: 577 IMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVE--GLVQGIKVRVIDTPGLLP 634
Query: 82 SSAD 85
S +D
Sbjct: 635 SWSD 638
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis
thaliana GN=TOC159 PE=1 SV=1
Length = 1503
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 21 NLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLF 80
N++++G+ G GKSAT NSILG + A T E+ T+ +G + IDTPGL
Sbjct: 857 NILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTV--NGVKITFIDTPGLK 914
Query: 81 DSSAD 85
++ D
Sbjct: 915 SAAMD 919
>sp|Q5FFN4|ERA_EHRRG GTPase Era OS=Ehrlichia ruminantium (strain Gardel) GN=era PE=3
SV=1
Length = 296
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 24 LVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNV--IDTPGLFD 81
+VG T GKS N ++G++ A + +T ++ + + + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLVNVLVGQKV----AAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFS 68
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEE 120
E K +VK M+ GI V+V+ V+N ++
Sbjct: 69 PKTKLE---KFLVKHAWMSLKGIENVIVLVDVKNYLNQH 104
>sp|Q3YRS0|ERA_EHRCJ GTPase Era OS=Ehrlichia canis (strain Jake) GN=era PE=3 SV=1
Length = 296
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 24 LVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQV-VNVIDTPGLFDS 82
+VG T GKS N ++G+ K A + V T +L + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGR---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 83 SADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEE 120
E K IVK M+ GI V+++ V+N ++
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKH 104
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G+ G GKS+T NSI+G+R S + + R+ + G +N+IDTPGL +
Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLIE 99
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G+ G GKS+T NS++G++A S + + RT + G +N+IDTPGL +
Sbjct: 41 VLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRT--RSGFTLNIIDTPGLIE 98
>sp|Q5HAY9|ERA_EHRRW GTPase Era OS=Ehrlichia ruminantium (strain Welgevonden) GN=era
PE=3 SV=1
Length = 296
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 24 LVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNV--IDTPGLFD 81
+VG T GKS N ++G++ A + +T ++ + + + V + IDTPG+F
Sbjct: 13 IVGATNAGKSTLVNVLVGQKV----AAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFS 68
Query: 82 SSADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEE 120
E K +VK M+ GI V+V+ V+N ++
Sbjct: 69 PKTKLE---KFLVKHAWMSLKGIENVIVLVDVKNYLNQH 104
>sp|Q9LUS2|TC120_ARATH Translocase of chloroplast 120, chloroplastic OS=Arabidopsis
thaliana GN=TOC120 PE=1 SV=1
Length = 1089
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 22 LVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFD 81
++++G++G GKSAT NSI + + A G K +++ + G V VIDTPGL
Sbjct: 459 IMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFV--QGIKVRVIDTPGLLP 516
Query: 82 SSADSEFVSKEIVKCI 97
S +D + +++I+K +
Sbjct: 517 SWSD-QHKNEKILKSV 531
>sp|A4IQA2|DER_GEOTN GTPase Der OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=der PE=3 SV=1
Length = 436
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 24 LVGRTGNGKSATANSILG-KRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFDS 82
L+GR GKS+ N+ILG +R S +G T+ + + +++GQ +IDT G+
Sbjct: 180 LIGRPNVGKSSLVNAILGEERVIVSDI--AGTTRDA-VDTSFVREGQKYVIIDTAGMRKR 236
Query: 83 SADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY--- 139
E K V + VLVV + EEG I+E KKI+ Y
Sbjct: 237 GKIYESTEKYSVLRALRAIERSDVVLVVLNA------EEG----IIEQ--DKKIAGYAHE 284
Query: 140 ----MIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTE 195
+I+V D +E +D+T+ E + +++ D +LF +AK +
Sbjct: 285 AGRGVILVVNKWDAVEKDDKTMV-----EFERKIRDHFPFLDYAPILF-----VSAKTKQ 334
Query: 196 QVGKLLSLVNSV 207
++ KLL LV V
Sbjct: 335 RLHKLLPLVQLV 346
>sp|Q8Y7F0|RSGA1_LISMO Putative ribosome biogenesis GTPase RsgA 1 OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=rsgA1 PE=3 SV=1
Length = 346
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 2 GGRVIDADSKPTSPSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAG-----SSGVTK 56
G +++D KP S L+L+G +G GKS+ NS+ G K+ AG S G
Sbjct: 172 GFEALESDLKPNS------TLILLGSSGVGKSSFINSLAGTDLMKT-AGIREDDSKGKHT 224
Query: 57 TCEMQRTMLKDGQVVNVIDTPGL 79
T + +L +G + VIDTPG+
Sbjct: 225 TTHREMHLLSNGWI--VIDTPGM 245
>sp|B5Z9J7|ENGB_HELPG Probable GTP-binding protein EngB OS=Helicobacter pylori (strain
G27) GN=engB PE=3 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 15 PSNGERNLVLVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQ----- 69
P++ +V++GR+ GKS+ N++LGK KS A + G T+ T +D +
Sbjct: 20 PASLTSEMVILGRSNVGKSSFINTLLGKNLAKSSA-TPGKTRLANFFSTTWEDKENALTT 78
Query: 70 VVNVIDTPGL 79
NVID PG
Sbjct: 79 TFNVIDLPGF 88
>sp|Q2GGZ1|ERA_EHRCR GTPase Era OS=Ehrlichia chaffeensis (strain Arkansas) GN=era PE=3
SV=1
Length = 296
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 24 LVGRTGNGKSATANSILGKRAFKSKAGSSGVTKTCEMQRTMLKDGQV-VNVIDTPGLFDS 82
+VG T GKS N ++G+ K A + V T +L + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGQ---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 83 SADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEE 120
E K IVK M+ GI V+++ V+N ++
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKH 104
>sp|Q5KXT0|DER_GEOKA GTPase Der OS=Geobacillus kaustophilus (strain HTA426) GN=der PE=3
SV=1
Length = 436
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 33/192 (17%)
Query: 24 LVGRTGNGKSATANSILG-KRAFKSKAGSSGVTKTCEMQRTMLKDGQVVNVIDTPGLFDS 82
L+GR GKS+ N+ILG +R S +G T+ + + +++GQ +IDT G+
Sbjct: 180 LIGRPNVGKSSLVNAILGEERVIVSDI--AGTTRDA-VDTSFVREGQEYVIIDTAGMRKR 236
Query: 83 SADSEFVSKEIVKCIGMTKDGIHAVLVVFSVRNRFSEEEGAAIHILESLFGKKISDY--- 139
E K V + VLVV + EEG I+E KKI+ Y
Sbjct: 237 GKIYESTEKYSVLRALRAIERSDVVLVVLNA------EEG----IIEQ--DKKIAGYAHE 284
Query: 140 ----MIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDTAKRTE 195
+I++ D +E +D+T+ ++ + +++ D +LF +AK +
Sbjct: 285 AGRGVILIVNKWDAIEKDDKTMVEF-----ERKIRDHFPFLDYAPILF-----VSAKTKQ 334
Query: 196 QVGKLLSLVNSV 207
++ KLL LV V
Sbjct: 335 RLHKLLPLVRLV 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,292,744
Number of Sequences: 539616
Number of extensions: 3625968
Number of successful extensions: 14693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 754
Number of HSP's that attempted gapping in prelim test: 14145
Number of HSP's gapped (non-prelim): 1020
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)