BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036160
(601 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 328/596 (55%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+ +F +M + + V++N L+NG ++ G G+K M LF M + +L++++ +
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G + GQ +HA +LG A + + +L+++Y+KC + AL F + +VV W +
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
+ + + +IF M+ + PNQ+ S+++ GD GE IH+ I K F
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+ + V + L+ MY + G++ + A +D VSW + + + Y D+ L F Q
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
ML +G + + + AC+ L + G+Q+HA + +LV +Y + G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
+E++ +AF+ D A+ A+++ + Q+G E AL+ F +M EGI +N FT S +
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 364 CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASW 423
S A + G+ +H++ KTG+ + V AL++MYAKCGSI DAE F + ++ SW
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 424 NMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKK 483
N +I Y KHG G +AL++F M+ P+ +T V VLSACSH+GL+++G +F S+
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 484 IYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDE 543
YG++P +H+ C++D+L RAG + + FI E + P+ALVW LL AC H N+E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 544 KDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
A LLELEP+ + YV S++ A +W+ R + +G+KKEP SWIEV
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 266/537 (49%), Gaps = 2/537 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++LA+RVF + + SW A+++G +++ + + LFC M + + ++ S+VL
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
++ G+ +H + ++LG + D ++ +LV +Y G +A +F + D V +
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I L Q G ++A ++F M ++P+ L SLV A + G G+ +HA K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
GF S+ + AL+++Y + + F ++ V WN + + + RI
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
F QM ++ PN T+ ILK C L D+ G+Q+H+ IK + N V + L+DMY K
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G L+ A A KD+ ++T +I Y Q + AL FR+M GI+S+E L +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 361 LNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDT 420
++ C+ + L G+ +H+ A +G D+ ALV +Y++CG I+++ F+ + D
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 421 ASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSS 480
+WN ++ G+ + G E+AL F M EG + TF + A S +++GK+ +
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 481 IKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
I K G + +I + + G ++ E E T N + W ++ A S HG
Sbjct: 718 ITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAYSKHG 772
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 284/594 (47%), Gaps = 12/594 (2%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG-FA 62
A +VF MPE + +WN ++ A +V LF M ++ + S VL+
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
S + +HA + G + L+D+YS+ G D A +VF ++ D +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+I+ L + C EA ++F M + P + +S++ A + GE +H ++ K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
F SDT V NALVS+Y G + +F ++ +D+V++N L + ++ + +F
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 243 QMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSG 302
+M L G +P+ T ++ ACS+ + G+QLHA+T K N+ + +L+++Y K
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 303 CLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLN 362
+E A F +++ + ++ +Y + + + FR+M++E I N++T S L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 363 GCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS 422
C + L G +HS +KT L+ +V + L+ MYAK G +D A + A +D S
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 423 WNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
W MI GY ++ +KAL FR MLD G DE+ +SAC+ + ++EG++ +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQA 617
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
+ G + + ++ + R GK E +T+ N + W L+ GN E
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNE-- 674
Query: 543 EKDAEKL---LELEPKMESNYVFPSDISATQGRWNDFSG--VRALLSSQGIKKE 591
+A ++ + E +N+ F S + A N G V A+++ G E
Sbjct: 675 --EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 214/465 (46%), Gaps = 19/465 (4%)
Query: 53 SLSTVLKG-FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYR 111
+L +L+G +G + G+ +H+ ++LG + LS L D Y G A KVF
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 112 IKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCG 171
+ + + W +I L + E +F M +V PN+ + ++ A R G
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGG 199
Query: 172 -------ESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNAL 224
E IHA I G T+V N L+ +Y NG V RVF+ + +D SW A+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 225 FSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSL 284
S E + +R+F M + G P F +L AC + + G+QLH +K
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 285 DGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRK 344
+ V +LV +Y G L A F +++ +D Y +I +Q G E A++ F++
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 345 MRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGS 404
M L+G++ + TLAS + CS TL G+ LH+ K G + + AL+ +YAKC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 405 IDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSA 464
I+ A F + + + WN+M+ Y + FR M E VP++ T+ +L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 465 CSHMGLIEEGKKHFSSIKKIYGITPTIKHFAC--MIDILGRAGKF 507
C +G +E G++ S I K + + C +ID+ + GK
Sbjct: 500 CIRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKL 541
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 206/450 (45%), Gaps = 13/450 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A F NVV WN +L Y D + +F M+ E ++++ ++LK
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
G ++ G+ +H+ I+ L+ ++ L+DMY+K G D A + R DVV+W
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I Q +A F M + ++ ++ LT+ V A + G+ IHA C
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
GF SD NALV++Y G++ FE D+++WNAL S FQ + ++ LR+
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
F +M +G N TF +KA S +++ GKQ+HA K D V +L+ MY K
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G + DA F ++ K+ ++ AII +Y++ G AL F +M ++ N TL
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 799
Query: 361 LNGCSPVATLANG-RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR- 418
L+ CS + + G S+ + G +V M + G + A+ + ++
Sbjct: 800 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP 859
Query: 419 DTASW-----------NMMIGGYVKHGLGE 437
D W NM IG + H L E
Sbjct: 860 DALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 218/452 (48%), Gaps = 15/452 (3%)
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTET-GDQRCGESIHAV 177
++ AI + + QE K + + ++PN L L+ +T G G +H+
Sbjct: 53 SFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQ 110
Query: 178 ICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQG 237
I K G +S+ + L Y+ G + +VF+ + + +WN + +
Sbjct: 111 ILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV 170
Query: 238 LRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFG--KQLHAHTIKHSLDGNHVVGTSLV 295
+F +M+ + PN TF +L+AC S V F +Q+HA + L + VV L+
Sbjct: 171 FGLFVRMVSENVTPNEGTFSGVLEACRGGS-VAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 296 DMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEF 355
D+Y ++G ++ A FD L KD ++ A+I+ ++ A++ F M + GI +
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 356 TLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGS 415
+S L+ C + +L G LH + +K G D +V ALV++Y G++ AE +F
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 416 ALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGK 475
+ RD ++N +I G + G GEKA+E F+ M +G PD T ++ ACS G + G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 476 KHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSW 535
+ + K+ G K ++++ + ++ ET++ N ++W +L A
Sbjct: 410 QLHAYTTKL-GFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLWNVMLVA--- 464
Query: 536 HGNIELDEKDAEKL---LELEPKMESNYVFPS 564
+G ++ D +++ ++ +++E + + Y +PS
Sbjct: 465 YGLLD-DLRNSFRIFRQMQIEEIVPNQYTYPS 495
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 330/603 (54%), Gaps = 4/603 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
ME A +VF+++ E N V WNA++ GYA +G+ KVM LF MK F+ +++L
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A S ++ G H++ I+ A + F+ +LVDMY+KCG ++A ++F R+ D D V W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
II Q EA +F M + + L S ++A T G+ +H + K
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
G + D G++L+ MY + G + +VF ++ VS NAL + + + ++ + +
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVL 616
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGN-HVVGTSLVDMYD 299
F +ML +G P+ TF I++AC + G Q H K +G SL+ MY
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 300 KSGCLEDAGVAFDSLAN-KDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
S + +A F L++ K + +T +++ ++Q G E ALK +++MR +G+ ++ T
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
+ L CS +++L GR +HS+ H LD S L+ MYAKCG + + VF R
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 419 -DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
+ SWN +I GY K+G E AL+ F M +PDEITF+ VL+ACSH G + +G+K
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
F + YGI + H ACM+D+LGR G E ++FI L P+A +W +LLGAC HG
Sbjct: 857 FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
+ E AEKL+ELEP+ S YV S+I A+QG W + +R ++ +G+KK P SWI
Sbjct: 917 DDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Query: 598 EVD 600
+V+
Sbjct: 977 DVE 979
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 277/568 (48%), Gaps = 15/568 (2%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+ +F M +VV+WN +++G+ + G + F +M+ K ++ +L +VL
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
+ G VVHA AI+LG A + ++ SLV MYSKC + A KVF +++ + V W A+
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I G + ++F M+ S + F TSL+ + D G H++I K
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+ VGNALV MY + G + ++FE + +D+V+WN + + E+ + +F +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M L G + LKAC+ + + GKQ+H ++K LD + G+SL+DMY K G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
++DA F SL + + A+I Y+Q E A+ F++M G+ +E T A+ +
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 364 CSPVATLANGRLLHSIAVKTGHLLD-MFVSTALVAMYAKCGSIDDAEAVFKG-SALRDTA 421
C +L G H K G + ++ +L+ MY + +A A+F S+ +
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 698
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSI 481
W M+ G+ ++G E+AL+ ++ M +G +PD+ TFV VL CS + + EG+ S
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS-- 756
Query: 482 KKIYGITPTIKHFA--CMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNI 539
I+ + + +ID+ + G E + N + W +L+ + +G
Sbjct: 757 -LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY- 814
Query: 540 ELDEKDAEKLLELEPKMESNYVFPSDIS 567
AE L++ M +++ P +I+
Sbjct: 815 ------AEDALKIFDSMRQSHIMPDEIT 836
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 284/620 (45%), Gaps = 80/620 (12%)
Query: 13 ELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQV 72
E +V +WN++L+ Y+ G KV+ F S+ + + +KF+ S VL A ++ G+
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 73 VHAMAIRLGCALDKFLSCSLVDMYSKC-------------------------------GL 101
+H I++G + + +LVDMY+KC GL
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 102 ADNALKVFYRIKD-----------------------------------PDVVAWGAIITC 126
+ A+ VF R++D PDVVAW +I+
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 127 LDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESD 186
++GC A + F MR+SSVK + L S++ A + G +HA K G S+
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 187 TLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLL 246
VG++LVSMY + ++ ++VFEA+ ++ V WNA+ + + + +F M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 247 KGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLED 306
G+ + TF +L C++ D+ G Q H+ IK L N VG +LVDMY K G LED
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 307 AGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSP 366
A F+ + ++D + II SY Q A F++M L GI S+ LAS L C+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 367 VATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMM 426
V L G+ +H ++VK G D+ ++L+ MY+KCG I DA VF S N +
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 601
Query: 427 IGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYG 486
I GY ++ L E+A+ F+ ML G P EITF ++ AC + G + I K G
Sbjct: 602 IAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK-RG 659
Query: 487 ITPTIKHFACMIDILG---RAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDE 543
+ ++ I +LG + TE +E + ++W ++ S +G
Sbjct: 660 FSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY---- 713
Query: 544 KDAEKLLELEPKMESNYVFP 563
E+ L+ +M + V P
Sbjct: 714 ---EEALKFYKEMRHDGVLP 730
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 38/466 (8%)
Query: 67 IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITC 126
++ G+ VH+ ++ LG + L ++VD+Y+KC A K F + DV AW ++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSM 134
Query: 127 LDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESD 186
G + + F + E+ + PN+F + ++ + G IH + K G E +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 187 TLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLL 246
+ G ALV MY + R+S RVFE I ++V W LFS + P++ + +F +M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 247 KGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLED 306
+G +P+ F+ + ++ Y + G L+D
Sbjct: 255 EGHRPDHLAFVTV-----------------------------------INTYIRLGKLKD 279
Query: 307 AGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSP 366
A + F +++ D+ A+ +I+ + + G +A++ F MR +KS TL S L+
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 367 VATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMM 426
VA L G ++H+ A+K G +++V ++LV+MY+KC ++ A VF+ ++ WN M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 427 IGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYG 486
I GY +G K +E F M GY D+ TF +LS C+ +E G + F SI
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKK 458
Query: 487 ITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGA 532
+ + ++D+ + G + I E + + W ++G+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQ-IFERMCDRDNVTWNTIIGS 503
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 47/392 (11%)
Query: 169 RCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRF 228
R G+++H+ G +S+ +GNA+V +Y + +VSY + F+ + +D +WN++ S +
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMY 135
Query: 229 QDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNH 288
P + LR F + PN TF ++L C+ ++V FG+Q+H IK L+ N
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 289 VVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE 348
G +LVDMY K + DA F+ + + + +T + + Y +AG E A+ F +MR E
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 349 GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDA 408
G + + + +N Y + G + DA
Sbjct: 256 GHRPDHLAFVTVIN-----------------------------------TYIRLGKLKDA 280
Query: 409 EAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
+F + D +WN+MI G+ K G A+E F M T VLSA +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 469 GLIEEG-KKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWE 527
++ G H +IK G+ I + ++ + + K E + E N + W
Sbjct: 341 ANLDLGLVVHAEAIK--LGLASNIYVGSSLVSMYSKCEKM-EAAAKVFEALEEKNDVFWN 397
Query: 528 NLLGACSWHGNIELDEKDAEKLLELEPKMESN 559
++ + +G ++ K++EL M+S+
Sbjct: 398 AMIRGYAHNG-------ESHKVMELFMDMKSS 422
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 142/309 (45%), Gaps = 22/309 (7%)
Query: 225 FSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSD--------------VG 270
F R Y SPD G RI+ +L + + + L C +
Sbjct: 19 FVRRLSY-SPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALR 77
Query: 271 FGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYA 330
GK +H+ ++ +D +G ++VD+Y K + A FD L KD+ A+ ++++ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 331 QAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMF 390
G+ L+ F + I N+FT + L+ C+ + GR +H +K G + +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 391 VSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEG 450
ALV MYAKC I DA VF+ +T W + GYVK GL E+A+ F M DEG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 451 YVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAG-KFTE 509
+ PD + FV V++ +G +++ + F + +P + + MI G+ G +
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVA 311
Query: 510 IENFITETK 518
IE F K
Sbjct: 312 IEYFFNMRK 320
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/601 (34%), Positives = 335/601 (55%), Gaps = 5/601 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESG---DGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
A +F ++ +VVSWN+L+ GY+++G VM LF M+ + + ++L+ + K
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
++ G+ HA+ +++ D ++ SLV MY K GL ++ LKVF + + + W
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 121 GAIITCLDQQGCCQEAAKIFNL-MRESSVKPNQ-FVLTSLVRATTETGDQRCGESIHAVI 178
+++ +G +EA K+FNL +RE + +V T+++ + T G IH +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
K G + NALV+MY + ++ ++F++ ++S++W+A+ + + + +
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
++F +M G KP+ T + +L ACS + + GKQLH+ +K + + T+LVDMY
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K+GCL DA FD L +D+ +T++I+ Y Q + E AL +R+M+ GI N+ T+A
Sbjct: 368 AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 427
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
S L CS +ATL G+ +H +K G L++ + +AL MY+KCGS++D VF+ + +
Sbjct: 428 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
D SWN MI G +G G++ALE F ML EG PD++TFV ++SACSH G +E G +F
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYF 547
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
+ + G+ P + H+ACM+D+L RAG+ E + FI + +W LL AC HG
Sbjct: 548 NMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
EL EKL+ L + S YV S I GR D V + + G+ KE CSWIE
Sbjct: 608 CELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Query: 599 V 599
+
Sbjct: 668 L 668
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 258/522 (49%), Gaps = 19/522 (3%)
Query: 55 STVLKGFANSGYIK---AGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYR 111
ST+LK + + AG+ VH IR G + + LV+ Y+KCG A +F
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 112 IKDPDVVAWGAIITCLDQQGCCQEA---AKIFNLMRESSVKPNQFVLTSLVRATTETGDQ 168
I DVV+W ++IT Q G + ++F MR + PN + L + +A +
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS 134
Query: 169 RCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRF 228
G HA++ K D V +LV MY + G V G +VF + +++ +W+ + S +
Sbjct: 135 TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 229 QDYESPDQGLRIFYQMLLKGFKPNMC--TFIVILKACSSLSDVGFGKQLHAHTIKHSLDG 286
++ +++F L + + + F +L + ++ VG G+Q+H TIK+ L G
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 287 NHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMR 346
+ +LV MY K L +A FDS +++ ++A++T Y+Q GE+ A+K F +M
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 347 LEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSID 406
GIK +E+T+ LN CS + L G+ LHS +K G +F +TALV MYAK G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 407 DAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACS 466
DA F RD A W +I GYV++ E+AL +R M G +P++ T VL ACS
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 467 HMGLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALV 525
+ +E GK+ H +IK +G+ I + + + + G E N + + +
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSL-EDGNLVFRRTPNKDVVS 491
Query: 526 WENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDIS 567
W ++ S +G ++ LEL +M + + P D++
Sbjct: 492 WNAMISGLSHNGQ-------GDEALELFEEMLAEGMEPDDVT 526
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 10/219 (4%)
Query: 356 TLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGS 415
TL L S L GR +H ++TG + + LV YAKCG + A ++F
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 416 ALRDTASWNMMIGGYVKHG---LGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIE 472
+D SWN +I GY ++G ++ FR M + +P+ T + A S +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 473 EGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTP--NALVWENLL 530
G++ + + K+ + ++G K +E+ + P N W ++
Sbjct: 136 VGRQAHALVVKM----SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 531 GACSWHGNIELDEKDAEKLL-ELEPKMESNYVFPSDISA 568
+ G +E K L E E +S+YVF + +S+
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS 230
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E VF+ P +VVSWNA+++G + +G G + + LF M + + ++
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 61 FANSGYIKAGQVVHAM---AIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPD- 116
++ G+++ G M I L +D + +C +VD+ S+ G A K F + D
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHY-AC-MVDLLSRAGQLKEA-KEFIESANIDH 590
Query: 117 -VVAWGAIITCLDQQGCCQ 134
+ W +++ G C+
Sbjct: 591 GLCLWRILLSACKNHGKCE 609
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/608 (34%), Positives = 329/608 (54%), Gaps = 17/608 (2%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLF--------CSMKDMEKKFSKFSLS 55
A+ +F +MP+ VV+W L+ YA + + LF C++ D + +
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD------HVTFT 151
Query: 56 TVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLA--DNALKVFYRIK 113
T+L G ++ A VHA A++LG + FL+ S V + S C + D A +F I
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 114 DPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGES 173
+ D V + +IT ++ G E+ +F MR+S +P+ F + +++A D G+
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 174 IHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYES 233
+HA+ GF D VGN ++ Y ++ RV +F+ + D VS+N + S + +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 234 PDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS 293
+ L F +M GF F +L ++LS + G+QLH + + D VG S
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSN 353
LVDMY K E+A + F SL + ++TA+I+ Y Q G LK F KMR ++++
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
+ T A+ L + A+L G+ LH+ +++G+L ++F + LV MYAKCGSI DA VF+
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFE 511
Query: 414 GSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEE 473
R+ SWN +I + +G GE A+ AF M++ G PD ++ + VL+ACSH G +E+
Sbjct: 512 EMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 474 GKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGAC 533
G ++F ++ IYGITP KH+ACM+D+LGR G+F E E + E P+ ++W ++L AC
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Query: 534 SWHGNIELDEKDAEKLLELEP-KMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEP 592
H N L E+ AEKL +E + + YV S+I A G W V+ + +GIKK P
Sbjct: 632 RIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVP 691
Query: 593 SCSWIEVD 600
+ SW+EV+
Sbjct: 692 AYSWVEVN 699
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 233/510 (45%), Gaps = 9/510 (1%)
Query: 52 FSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSC-SLVDMYSKCGLADNALKVFY 110
F T F ++ GQV A + +S +++ + K G +A +F
Sbjct: 44 FDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFD 103
Query: 111 RIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESS--VKPNQFVLTSLVRATTETGDQ 168
+ D VV W ++ + EA K+F M SS P+ T+L+ + Q
Sbjct: 104 AMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQ 163
Query: 169 RCGESIHAVICKYGFESDTL--VGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFS 226
+HA K GF+++ V N L+ Y E R+ +FE I +DSV++N L +
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 227 RFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDG 286
++ + + +F +M G +P+ TF +LKA L D G+QLHA ++
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 287 NHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMR 346
+ VG ++D Y K + + + FD + D +Y +I+SY+QA + E +L FR+M+
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 347 LEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSID 406
G F A+ L+ + +++L GR LH A+ + V +LV MYAKC +
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 407 DAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACS 466
+AE +FK R T SW +I GYV+ GL L+ F M D+ TF VL A +
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 467 HMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVW 526
+ GK+ + I + G + + ++D+ + G + E NA+ W
Sbjct: 464 SFASLLLGKQLHAFIIR-SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSW 521
Query: 527 ENLLGACSWHGNIELDEKDAEKLLE--LEP 554
L+ A + +G+ E K++E L+P
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 227/525 (43%), Gaps = 60/525 (11%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++LA +F+ +PE + V++N L+ GY + G + +HLF M+ + S F+ S VLK
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
GQ +HA+++ G + D + ++D YSK +F + + D V++
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I+ Q + + F M+ F +++ + G +H
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
+S VGN+LV MY + +F+++ + +VSW AL S + GL++
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
F +M + + TF +LKA +S + + GKQLHA I+ N G+ LVDMY K
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G ++DA F+ + +++ ++ A+I+++A G+ E A+ F KM G++ + ++
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 361 LNGCSPVATLANG-------RLLHSIAVKTGH---LLDMFVSTALVAMYAKCGSIDDAEA 410
L CS + G ++ I K H +LD+
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL-------------------- 599
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSAC---SH 467
G + EA ++M + + PDEI + VL+AC +
Sbjct: 600 -----------------------GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 468 MGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIEN 512
L E + S++K+ + M +I AG++ ++ +
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAA----YVSMSNIYAAAGEWEKVRD 677
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 159/374 (42%), Gaps = 38/374 (10%)
Query: 174 IHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFS---RFQD 230
+ A I K GF++DT N +V + G+VS +V++ + H+++VS N + S + D
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 231 YESP----------------------------DQGLRIFYQMLLKG--FKPNMCTFIVIL 260
S D+ ++F QM P+ TF +L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 261 KACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS--LVDMYDKSGCLEDAGVAFDSLANKD 318
C+ Q+HA +K D N + S L+ Y + L+ A V F+ + KD
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 319 LFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHS 378
+ +IT Y + G ++ F KMR G + ++FT + L + A G+ LH+
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 379 IAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEK 438
++V TG D V ++ Y+K + + +F D S+N++I Y + E
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 439 ALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFA-CM 497
+L FR M G+ F +LS +++ ++ G++ + + +I H +
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ--LHCQALLATADSILHVGNSL 392
Query: 498 IDILGRAGKFTEIE 511
+D+ + F E E
Sbjct: 393 VDMYAKCEMFEEAE 406
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 331/603 (54%), Gaps = 4/603 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++ A+ VF ++PE + V+W +++G + G + LF + + + LSTVL
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ +++ G+ +HA +R G +D L L+D Y KCG A K+F + + ++++W
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISW 318
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+++ Q +EA ++F M + +KP+ + +S++ + G +HA K
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 378
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNAL---FSRFQDYESPDQG 237
+D+ V N+L+ MY + ++ +VF+ A D V +NA+ +SR +
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 238 LRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDM 297
L IF M + +P++ TF+ +L+A +SL+ +G KQ+H K+ L+ + G++L+D+
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 298 YDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTL 357
Y CL+D+ + FD + KDL + ++ Y Q E E AL F +++L + +EFT
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
A+ + +A++ G+ H +K G + +++ AL+ MYAKCGS +DA F +A
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
RD WN +I Y HG G+KAL+ M+ EG P+ ITFV VLSACSH GL+E+G K
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
F + + +GI P +H+ CM+ +LGRAG+ + I + P A+VW +LL C+ G
Sbjct: 679 FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
N+EL E AE + +PK ++ S+I A++G W + VR + +G+ KEP SWI
Sbjct: 738 NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Query: 598 EVD 600
++
Sbjct: 798 GIN 800
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/599 (27%), Positives = 295/599 (49%), Gaps = 27/599 (4%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFC----SMKDMEKKFSKFSLST 56
M A++VF+ MPE N+VSW+ +++ G ++ + +F + KD ++ S
Sbjct: 95 MVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQ 154
Query: 57 VLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPD 116
G G Q+ + ++ G D ++ L+D Y K G D A VF + +
Sbjct: 155 ACSGLDGRGRWMVFQL-QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 117 VVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHA 176
V W +I+ + G + ++F + E +V P+ ++L++++ A + G+ IHA
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 177 VICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQ 236
I +YG E D + N L+ Y++ GRV ++F + +++ +SW L S ++ +
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 237 GLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVD 296
+ +F M G KP+M IL +C+SL +GFG Q+HA+TIK +L + V SL+D
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 297 MYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAG---EAEMALKCFRKMRLEGIKSN 353
MY K CL DA FD A D+ + A+I Y++ G E AL FR MR I+ +
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
T S L + + +L + +H + K G LD+F +AL+ +Y+ C + D+ VF
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 414 GSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEE 473
++D WN M GYV+ E+AL F + PDE TF +++A ++ ++
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 474 GKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGA 532
G++ H +K+ P I + ++D+ + G E + ++ + + + W +++ +
Sbjct: 574 GQEFHCQLLKRGLECNPYITN--ALLDMYAKCGS-PEDAHKAFDSAASRDVVCWNSVISS 630
Query: 533 CSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKE 591
+ HG + +K L++ KM S + P+ I+ F GV + S G+ ++
Sbjct: 631 YANHG-------EGKKALQMLEKMMSEGIEPNYIT--------FVGVLSACSHAGLVED 674
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 228/453 (50%), Gaps = 7/453 (1%)
Query: 54 LSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIK 113
+ +L+ A+ + VVH I G LD +LS L+++YS+ G A KVF ++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 114 DPDVVAWGAIITCLDQQGCCQEAAKIF-NLMRESSVKPNQFVLTSLVRATT--ETGDQRC 170
+ ++V+W +++ + G +E+ +F R PN+++L+S ++A + + +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 171 GESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQD 230
+ + + K GF+ D VG L+ Y+++G + Y VF+A+ + +V+W + S
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 231 YESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVV 290
L++FYQ++ P+ +L ACS L + GKQ+HAH +++ L+ + +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 291 GTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGI 350
L+D Y K G + A F+ + NK++ ++T +++ Y Q + A++ F M G+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 351 KSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA 410
K + + +S L C+ + L G +H+ +K D +V+ +L+ MYAKC + DA
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLG---EKALEAFRMMLDEGYVPDEITFVVVLSACSH 467
VF A D +N MI GY + G +AL FR M P +TFV +L A +
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 468 MGLIEEGKKHFSSIKKIYGITPTIKHFACMIDI 500
+ + K+ + K YG+ I + +ID+
Sbjct: 467 LTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDV 498
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 332/601 (55%), Gaps = 5/601 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A +F MP+ + VSWN +++GY G + LF MK +S S +LKG A+
Sbjct: 54 ANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIAS 113
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G+ VH + I+ G + ++ SLVDMY+KC ++A + F I +P+ V+W A+
Sbjct: 114 VKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNAL 173
Query: 124 ITCLDQQGCCQEAAKIFNLMR-ESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
I Q + A + LM +++V + L+ + + +HA + K G
Sbjct: 174 IAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG 233
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIA-HQDSVSWNALFSRFQDYESPDQGLRIF 241
+ + + NA++S Y + G VS RVF+ + +D +SWN++ + F +E + +F
Sbjct: 234 LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELF 293
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK- 300
QM + ++ T+ +L ACS FGK LH IK L+ +L+ MY +
Sbjct: 294 IQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 353
Query: 301 -SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLAS 359
+G +EDA F+SL +KDL ++ +IIT +AQ G +E A+K F +R IK +++ ++
Sbjct: 354 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 413
Query: 360 CLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG-SALR 418
L CS +ATL G+ +H++A K+G + + FV ++L+ MY+KCG I+ A F+ S+
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
T +WN MI GY +HGLG+ +L+ F M ++ D +TF +L+ACSH GLI+EG +
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 533
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
+ ++ +Y I P ++H+A +D+LGRAG + + I L P+ +V + LG C G
Sbjct: 534 NLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGE 593
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
IE+ + A LLE+EP+ YV S + + +W + + V+ ++ +G+KK P SWIE
Sbjct: 594 IEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIE 653
Query: 599 V 599
+
Sbjct: 654 I 654
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 194/409 (47%), Gaps = 4/409 (0%)
Query: 72 VVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQG 131
+ H AI+ G D ++S ++D Y K G A +F + D V+W +I+ G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 132 CCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGN 191
++A +F M+ S + + + L++ GE +H ++ K G+E + VG+
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 192 ALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLK-GFK 250
+LV MY + RV F+ I+ +SVSWNAL + F + M +K
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 251 PNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVA 310
+ TF +L KQ+HA +K L + +++ Y G + DA
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 311 FDSL-ANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVAT 369
FD L +KDL ++ ++I +++ E A + F +M+ ++++ +T L+ CS
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 370 LANGRLLHSIAVKTGHLLDMFVSTALVAMYAK--CGSIDDAEAVFKGSALRDTASWNMMI 427
G+ LH + +K G + AL++MY + G+++DA ++F+ +D SWN +I
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 428 GGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
G+ + GL E A++ F + D+ F +L +CS + ++ G++
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 5/378 (1%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMK-DMEKKFSKFSLSTVLK 59
+E A FK + E N VSWNAL+ G+ + D + L M+ + + +L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRI-KDPDVV 118
+ + + VHA ++LG + + +++ Y+ CG +A +VF + D++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
+W ++I + + A ++F M+ V+ + + T L+ A + Q G+S+H ++
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 179 CKYGFESDTLVGNALVSMYME--NGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQ 236
K G E T NAL+SMY++ G + +FE++ +D +SWN++ + F +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 237 GLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVD 296
++ F + K + F +L++CS L+ + G+Q+HA K N V +SL+
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 297 MYDKSGCLEDAGVAFDSLANK-DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEF 355
MY K G +E A F +++K A+ A+I YAQ G +++L F +M + +K +
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHV 511
Query: 356 TLASCLNGCSPVATLANG 373
T + L CS + G
Sbjct: 512 TFTAILTACSHTGLIQEG 529
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 146/325 (44%), Gaps = 9/325 (2%)
Query: 276 HAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEA 335
H + IK + V ++D Y K G L A + FD + +D ++ +I+ Y G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 336 EMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTAL 395
E A F M+ G + ++ + L G + V G +H + +K G+ +++V ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 396 VAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMM-LDEGYVPD 454
V MYAKC ++DA FK + ++ SWN +I G+V+ + A +M + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 455 EITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFI 514
TF +L+ K+ + + K+ G+ I MI G ++ +
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKL-GLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 515 TETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPK-MESN-YVFPSDISATQGR 572
+ + + W +++ S H EL E E ++++ +E++ Y + +SA G
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 573 WNDFSG--VRALLSSQGIKKEPSCS 595
+ G + ++ +G+++ S +
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSAT 343
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 330/603 (54%), Gaps = 14/603 (2%)
Query: 3 LAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMH---LFCSMKDMEKKFSKFSLSTVLK 59
LA+ F + +V +WN +++GY +G+ +V+ LF + + F +VLK
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP--SVLK 161
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
+ G +H +A++ G D +++ SL+ +YS+ NA +F + D+ +
Sbjct: 162 ACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W A+I+ Q G +EA + N +R + + SL+ A TE GD G +IH+
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
K+G ES+ V N L+ +Y E GR+ +VF+ + +D +SWN++ ++ E P + +
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHV-VGTSLVDMY 298
+F +M L +P+ T I + S L D+ + + T++ + +G ++V MY
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEG-IKSNEFTL 357
K G ++ A F+ L N D+ ++ II+ YAQ G A A++ + M EG I +N+ T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
S L CS L G LH +K G LD+FV T+L MY KCG ++DA ++F
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
++ WN +I + HG GEKA+ F+ MLDEG PD ITFV +LSACSH GL++EG+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
F ++ YGITP++KH+ CM+D+ GRAG+ FI L P+A +W LL AC HG
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
N++L + +E L E+EP+ +V S++ A+ G+W +R++ +G++K P S +
Sbjct: 635 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Query: 598 EVD 600
EVD
Sbjct: 695 EVD 697
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 239/505 (47%), Gaps = 21/505 (4%)
Query: 67 IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITC 126
+++ + +HA + + +S LV++Y G A F I++ DV AW +I+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 127 LDQQGCCQEAAKIFNL-MRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFES 185
+ G E + F+L M S + P+ S+++A D G IH + K+GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 186 DTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML 245
D V +L+ +Y V +F+ + +D SWNA+ S + + + L L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TL 238
Query: 246 LKGFKP-NMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCL 304
G + + T + +L AC+ D G +H+++IKH L+ V L+D+Y + G L
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 305 EDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGC 364
D FD + +DL ++ +II +Y + A+ F++MRL I+ + TL S +
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 365 SPVATLANGRLLHSIAVKTGHLL-DMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASW 423
S + + R + ++ G L D+ + A+V MYAK G +D A AVF D SW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 424 NMMIGGYVKHGLGEKALEAFRMMLDEGYV-PDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
N +I GY ++G +A+E + +M +EG + ++ T+V VL ACS G + +G K +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
K G+ + + D+ G+ G+ + + + N++ W L+ +HG+
Sbjct: 479 K-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NSVPWNTLIACHGFHGH---- 532
Query: 543 EKDAEKLLELEPKMESNYVFPSDIS 567
EK + L +M V P I+
Sbjct: 533 ---GEKAVMLFKEMLDEGVKPDHIT 554
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 259 ILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKD 318
+ + C++L K LHA + N + LV++Y G + A FD + N+D
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 319 LFAYTAIITSYAQAGEAEMALKCFRKMRL-EGIKSNEFTLASCLNGCSPVATLANGRLLH 377
++A+ +I+ Y +AG + ++CF L G+ + T S L C T+ +G +H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIH 173
Query: 378 SIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGE 437
+A+K G + D++V+ +L+ +Y++ ++ +A +F +RD SWN MI GY + G +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 438 KAL---EAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKH 493
+AL R M D +T V +LSAC+ G G H SIK +G+ +
Sbjct: 234 EALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIK--HGLESELFV 284
Query: 494 FACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGA 532
+ID+ G+ + + + + + + W +++ A
Sbjct: 285 SNKLIDLYAEFGRLRDCQK-VFDRMYVRDLISWNSIIKA 322
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A +F +P +N V WN L+ + G G+K + LF M D K + T+L
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 61 FANSGYIKAGQ-VVHAMAIRLGCALD-KFLSCSLVDMYSKCGLADNALKVFYRIK-DPDV 117
++SG + GQ M G K C +VDMY + G + ALK + PD
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC-MVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 118 VAWGAIITCLDQQG 131
WGA+++ G
Sbjct: 621 SIWGALLSACRVHG 634
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 330/599 (55%), Gaps = 10/599 (1%)
Query: 5 KRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANS 64
++VF M E NVV+W L++GYA + +V+ LF M++ + + F+ + L A
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 65 GYIKAGQVVHAMAIRLGCALDKFL--SCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
G G VH + ++ G LDK + S SL+++Y KCG A +F + + VV W +
Sbjct: 208 GVGGRGLQVHTVVVKNG--LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+I+ G EA +F MR + V+ ++ S+++ + R E +H + KYG
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIA-HQDSVSWNALFSRFQDYESPDQGLRIF 241
F D + AL+ Y + + R+F+ I + VSW A+ S F + ++ + +F
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKS 301
+M KG +PN T+ VIL A +S ++HA +K + + + VGT+L+D Y K
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 302 GCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
G +E+A F + +KD+ A++A++ YAQ GE E A+K F ++ GIK NEFT +S L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 362 NGCSPV-ATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDT 420
N C+ A++ G+ H A+K+ + VS+AL+ MYAK G+I+ AE VFK +D
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 421 ASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSS 480
SWN MI GY +HG KAL+ F+ M D +TF+ V +AC+H GL+EEG+K+F
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 481 IKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIE 540
+ + I PT +H +CM+D+ RAG+ + I + +W +L AC H E
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 541 LDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
L AEK++ ++P+ + YV S++ A G W + + VR L++ + +KKEP SWIEV
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 248/536 (46%), Gaps = 6/536 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A +F P + S+ +LL G++ G Q+ LF ++ + + S+VLK A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G+ +H I+ G D + SLVD Y K + KVF +K+ +VV W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I+ + E +F M+ +PN F + + E G G +H V+ K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+ V N+L+++Y++ G V +F+ + V+WN++ S + + L +FY
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M L + + +F ++K C++L ++ F +QLH +K+ + + T+L+ Y K
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 304 LEDAGVAFDSLA-NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLN 362
+ DA F + ++ ++TA+I+ + Q E A+ F +M+ +G++ NEFT + L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 363 GCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS 422
PV + + +H+ VKT + V TAL+ Y K G +++A VF G +D +
Sbjct: 406 AL-PVISPSE---VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 423 WNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
W+ M+ GY + G E A++ F + G P+E TF +L+ C+ K F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
+ ++ + ++ + + G E + + + W +++ + HG
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 210/438 (47%), Gaps = 7/438 (1%)
Query: 104 NALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATT 163
NA +F + D ++ +++ + G QEA ++F + ++ + + +S+++ +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 164 ETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNA 223
D+ G +H K+GF D VG +LV YM+ G +VF+ + ++ V+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 224 LFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHS 283
L S + D+ L +F +M +G +PN TF L + G G Q+H +K+
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 284 LDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFR 343
LD V SL+++Y K G + A + FD K + + ++I+ YA G AL F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 344 KMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCG 403
MRL ++ +E + AS + C+ + L LH VK G L D + TAL+ Y+KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 404 SIDDAEAVFKG-SALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVL 462
++ DA +FK + + SW MI G++++ E+A++ F M +G P+E T+ V+L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 463 SACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPN 522
+A + +I + H +K Y + T+ ++D + GK E + +
Sbjct: 405 TA---LPVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGID-DKD 458
Query: 523 ALVWENLLGACSWHGNIE 540
+ W +L + G E
Sbjct: 459 IVAWSAMLAGYAQTGETE 476
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 4/283 (1%)
Query: 190 GNALVSMY----MENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML 245
G A V +Y + + R+ +F+ +D S+ +L F + R+F +
Sbjct: 26 GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH 85
Query: 246 LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLE 305
G + + F +LK ++L D FG+QLH IK + VGTSLVD Y K +
Sbjct: 86 RLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFK 145
Query: 306 DAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCS 365
D FD + +++ +T +I+ YA+ + L F +M+ EG + N FT A+ L +
Sbjct: 146 DGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA 205
Query: 366 PVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNM 425
G +H++ VK G + VS +L+ +Y KCG++ A +F + ++ +WN
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 426 MIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
MI GY +GL +AL F M E +F V+ C+++
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A +VF + + ++V+W+A+L GYA++G+ + + +F + K ++F+ S++L
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 61 -FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
A + + G+ H AI+ +S +L+ MY+K G ++A +VF R ++ D+V+
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W ++I+ Q G +A +F M++ VK + + A T G GE ++
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 180 KYGFESDTLVGNA-LVSMYMENGRVSYGSRVFEAIAHQ-DSVSWNALFSRFQDYESPDQG 237
+ + T N+ +V +Y G++ +V E + + S W + + + ++ + G
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 325/597 (54%), Gaps = 2/597 (0%)
Query: 4 AKRVFKSM-PELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
A RVF+ + +LNV+ ++ +L G+A+ D K + F M+ + + ++ + +LK
Sbjct: 88 AARVFEPIDSKLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG 146
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
+ ++ G+ +H + ++ G +LD F L +MY+KC + A KVF R+ + D+V+W
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
I+ Q G + A ++ M E ++KP+ + S++ A + G+ IH + G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
F+S + ALV MY + G + ++F+ + ++ VSWN++ + E+P + + IF
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 243 QMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSG 302
+ML +G KP + + L AC+ L D+ G+ +H +++ LD N V SL+ MY K
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 303 CLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLN 362
++ A F L ++ L ++ A+I +AQ G AL F +MR +K + FT S +
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 363 GCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS 422
+ ++ + + +H + +++ ++FV+TALV MYAKCG+I A +F + R +
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 423 WNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
WN MI GY HG G+ ALE F M P+ +TF+ V+SACSH GL+E G K F +K
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
+ Y I ++ H+ M+D+LGRAG+ E +FI + + P V+ +LGAC H N+
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 543 EKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
EK AE+L EL P +V ++I W VR + QG++K P CS +E+
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 201/409 (49%)
Query: 67 IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITC 126
+K + + + + G + F LV ++ + G D A +VF I V + ++
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 127 LDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESD 186
+ +A + F MR V+P + T L++ + + R G+ IH ++ K GF D
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 187 TLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLL 246
L +MY + +V+ +VF+ + +D VSWN + + + L + M
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 247 KGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLED 306
+ KP+ T + +L A S+L + GK++H + ++ D + T+LVDMY K G LE
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 307 AGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSP 366
A FD + +++ ++ ++I +Y Q + A+ F+KM EG+K + ++ L+ C+
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 367 VATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMM 426
+ L GR +H ++V+ G ++ V +L++MY KC +D A ++F R SWN M
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 427 IGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGK 475
I G+ ++G AL F M PD T+V V++A + + + K
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 9/312 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A+++F M E NVVSWN++++ Y ++ + ++ M +F M D K + S+ L
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A+ G ++ G+ +H +++ LG + + SL+ MY KC D A +F +++ +V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
A+I Q G +A F+ MR +VKP+ F S++ A E + IH V+ +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
+ + V ALV MY + G + +F+ ++ + +WNA+ + + L +
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 241 FYQMLLKGFKPNMCTFIVILKAC--SSLSDVG---FGKQLHAHTIKHSLDGNHVVGTSLV 295
F +M KPN TF+ ++ AC S L + G F ++I+ S+D ++V
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY----GAMV 582
Query: 296 DMYDKSGCLEDA 307
D+ ++G L +A
Sbjct: 583 DLLGRAGRLNEA 594
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 14/311 (4%)
Query: 258 VILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANK 317
++L+ CSSL ++ +Q+ K+ L H T LV ++ + G +++A F+ + +K
Sbjct: 42 LLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 318 DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLH 377
Y ++ +A+ + + AL+ F +MR + ++ + L C A L G+ +H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 378 SIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGE 437
+ VK+G LD+F T L MYAKC +++A VF RD SWN ++ GY ++G+
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 438 KALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFAC 496
ALE + M +E P IT V VL A S + LI GK+ H +++ G +
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS--GFDSLVNISTA 276
Query: 497 MIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKM 556
++D+ + G E + + L N + W +++ A +E E +L + KM
Sbjct: 277 LVDMYAKCGSL-ETARQLFDGMLERNVVSWNSMIDAYVQ------NENPKEAMLIFQ-KM 328
Query: 557 ESNYVFPSDIS 567
V P+D+S
Sbjct: 329 LDEGVKPTDVS 339
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 324/631 (51%), Gaps = 48/631 (7%)
Query: 16 VVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHA 75
V WN+L+ Y ++G K ++LF M + ++ V K ++ G+ HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 76 MAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQE 135
+++ G + F+ +LV MYS+C +A KVF + DVV+W +II + G +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 136 AAKIFNLM-RESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALV 194
A ++F+ M E +P+ L +++ G G+ +H + VGN LV
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 195 SMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF------------- 241
MY + G + + VF ++ +D VSWNA+ + + + +R+F
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 242 ----------------------YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHT 279
QML G KPN T I +L C+S+ + GK++H +
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 280 IKHSLD-------GNHVVGTSLVDMYDKSGCLEDAGVAFDSLANK--DLFAYTAIITSYA 330
IK+ +D ++V L+DMY K ++ A FDSL+ K D+ +T +I Y+
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 331 QAGEAEMALKCFRKMRLEG--IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTG-HLL 387
Q G+A AL+ +M E + N FT++ L C+ +A L G+ +H+ A++ + +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 388 DMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMML 447
+FVS L+ MYAKCGSI DA VF ++ +W ++ GY HG GE+AL F M
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 448 DEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKF 507
G+ D +T +VVL ACSH G+I++G ++F+ +K ++G++P +H+AC++D+LGRAG+
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 508 TEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDIS 567
I E + P +VW L C HG +EL E AEK+ EL + +Y S++
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 568 ATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
A GRW D + +R+L+ +G+KK P CSW+E
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 240/521 (46%), Gaps = 53/521 (10%)
Query: 67 IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPD--VVAWGAII 124
I +++H + G L L+ L+ Y G +A+ + R D V W ++I
Sbjct: 41 ISQVKLIHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 125 TCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFE 184
GC + +F LM S P+ + + +A E RCGES HA+ GF
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 185 SDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQM 244
S+ VGNALV+MY +S +VF+ ++ D VSWN++ + P L +F +M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 245 LLK-GFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
+ G +P+ T + +L C+SL GKQLH + + N VG LVDMY K G
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE--------------- 348
+++A F +++ KD+ ++ A++ Y+Q G E A++ F KM+ E
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 349 --------------------GIKSNEFTLASCLNGCSPVATLANGRLLHSIAV------- 381
GIK NE TL S L+GC+ V L +G+ +H A+
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 382 KTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL--RDTASWNMMIGGYVKHGLGEKA 439
K GH + V L+ MYAKC +D A A+F + RD +W +MIGGY +HG KA
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 440 LEAFRMMLDEG--YVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFAC 496
LE M +E P+ T L AC+ + + GK+ H +++ P C
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NC 518
Query: 497 MIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
+ID+ + G ++ + + + N + W +L+ HG
Sbjct: 519 LIDMYAKCGSISD-ARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 193/418 (46%), Gaps = 48/418 (11%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSM-KDMEKKFSKFSLSTVLKGFA 62
A++VF M +VVSWN+++ YA+ G + + +F M + + +L VL A
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
+ G G+ +H A+ + F+ LVDMY+KCG+ D A VF + DVV+W A
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 123 IITCLDQQGCCQEAAKIFNLMRE-----------------------------------SS 147
++ Q G ++A ++F M+E S
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 148 VKPNQFVLTSLVRATTETGDQRCGESIHAVICKY-------GFESDTLVGNALVSMYMEN 200
+KPN+ L S++ G G+ IH KY G + +V N L+ MY +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 201 GRVSYGSRVFEAIA--HQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKG--FKPNMCTF 256
+V +F++++ +D V+W + + + ++ L + +M + +PN T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 257 IVILKACSSLSDVGFGKQLHAHTIKHSLDGNHV-VGTSLVDMYDKSGCLEDAGVAFDSLA 315
L AC+SL+ + GKQ+HA+ +++ + + V L+DMY K G + DA + FD++
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 316 NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANG 373
K+ +T+++T Y G E AL F +MR G K + TL L CS + G
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 207/494 (41%), Gaps = 84/494 (17%)
Query: 2 ELAKRVFKSMPE----LNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTV 57
E A R+F+ M E ++VV+W+A ++GYA+ G G + + + M K ++ +L +V
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 58 LKGFANSGYIKAGQVVHAMAIRLGCALDK-------FLSCSLVDMYSKCGLADNALKVFY 110
L G A+ G + G+ +H AI+ L K + L+DMY+KC D A +F
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 111 RI--KDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRES--SVKPNQFVLTSLVRATTETG 166
+ K+ DVV W +I Q G +A ++ + M E +PN F ++ + A
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 167 DQRCGESIHAVICKYGFESDTL-VGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALF 225
R G+ IHA + + L V N L+ MY + G +S VF+ + ++ V+W +L
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Query: 226 SRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLD 285
+ + + ++ L IF +M GFK + T +V+L ACS
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS--------------------- 590
Query: 286 GNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFA-------YTAIITSYAQAGEAEMA 338
SG ++ F+ + K +F Y ++ +AG A
Sbjct: 591 --------------HSGMIDQGMEYFNRM--KTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 339 LKCFRKMRLEGIKSNEFTLASC--LNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALV 396
L+ +M +E SC ++G + A ++ + G T L
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY------TLLS 688
Query: 397 AMYAKCGSIDDAEAV-----FKGSALRDTASWNMMIGGYVKHGLGEK----ALEAFRMML 447
+YA G D + KG R SW I G +G+K A E ++++L
Sbjct: 689 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Query: 448 DE-------GYVPD 454
D GYVP+
Sbjct: 749 DHMQRIKDIGYVPE 762
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 16/307 (5%)
Query: 292 TSLVDMYDKSGCLEDAGVAFDSLANKD--LFAYTAIITSYAQAGEAEMALKCFRKMRLEG 349
+ L+ Y GCL A D ++ + ++I SY G A L F M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 350 IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAE 409
+ +T C ++++ G H++++ TG + ++FV ALVAMY++C S+ DA
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 410 AVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDE-GYVPDEITFVVVLSACSHM 468
VF ++ D SWN +I Y K G + ALE F M +E G PD IT V VL C+ +
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 469 GLIEEGKKHFSSIKKIYGITPTIKHFA----CMIDILGRAGKFTEIENFITETKLTPNAL 524
G GK+ + +T + C++D+ + G E N + + +
Sbjct: 243 GTHSLGKQ-----LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE-ANTVFSNMSVKDVV 296
Query: 525 VWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDIS--ATQGRWNDFSGVRAL 582
W ++ S G E + EK+ E + KM+ + + IS A +G + GV
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV-VTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 583 LSSQGIK 589
+ S GIK
Sbjct: 356 MLSSGIK 362
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 1 MELAKRVFKSMP--ELNVVSWNALLNGYAESGDGQKVMHLFCSM--KDMEKKFSKFSLST 56
++ A+ +F S+ E +VV+W ++ GY++ GD K + L M +D + + + F++S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 57 VLKGFANSGYIKAGQVVHAMAIR-LGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDP 115
L A+ ++ G+ +HA A+R A+ F+S L+DMY+KCG +A VF +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 116 DVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCG-ESI 174
+ V W +++T G +EA IF+ MR K + L ++ A + +G G E
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQ-DSVSWNALFS 226
+ + +G LV + GR++ R+ E + + V W A S
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 322/622 (51%), Gaps = 73/622 (11%)
Query: 49 FSKFSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKV 108
F+K L + +K ++ Y++ VHA I+ G + + F+ L+D YSKCG ++ +V
Sbjct: 22 FAKL-LDSCIKSKLSAIYVR---YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 109 FYRIKDPDVVAWGAIITCLDQQG-----------------C--------------CQEAA 137
F ++ ++ W +++T L + G C C+EA
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 138 KIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMY 197
F +M + N++ S++ A + D G +H++I K F SD +G+ALV MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 198 MENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFI 257
+ G V+ RVF+ + ++ VSWN+L + F+ + L +F ML +P+ T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 258 VILKACSSLSDVGFGKQLHAHTIKHS-LDGNHVVGTSLVDMYDKSGCLEDAGVAFDS--- 313
++ AC+SLS + G+++H +K+ L + ++ + VDMY K +++A FDS
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 314 ----------------------------LANKDLFAYTAIITSYAQAGEAEMALKCFRKM 345
+A +++ ++ A+I Y Q GE E AL F +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 346 RLEGIKSNEFTLASCLNGCSPVATLANGR------LLHSIAVKTGHLLDMFVSTALVAMY 399
+ E + ++ A+ L C+ +A L G L H ++G D+FV +L+ MY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 400 AKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFV 459
KCG +++ VF+ RD SWN MI G+ ++G G +ALE FR ML+ G PD IT +
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 460 VVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKL 519
VLSAC H G +EEG+ +FSS+ + +G+ P H+ CM+D+LGRAG E ++ I E +
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 520 TPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGV 579
P++++W +LL AC H NI L + AEKLLE+EP YV S++ A G+W D V
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 580 RALLSSQGIKKEPSCSWIEVDG 601
R + +G+ K+P CSWI++ G
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQG 639
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 237/490 (48%), Gaps = 55/490 (11%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++ A +F+SMPE + +WN++++G+A+ ++ + F M +++S ++VL
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ + G VH++ + D ++ +LVDMYSKCG ++A +VF + D +VV+W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
++ITC +Q G EA +F +M ES V+P++ L S++ A + G+ +H + K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 181 YG-FESDTLVGNALVSMYMENGRVSYGSRVFEA--------------------------- 212
+D ++ NA V MY + R+ +F++
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 213 ----IAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSD 268
+A ++ VSWNAL + + ++ L +F + + P +F ILKAC+ L++
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 269 VGFGKQLHAHTIKHSL------DGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAY 322
+ G Q H H +KH + + VG SL+DMY K GC+E+ + F + +D ++
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 323 TAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVK 382
A+I +AQ G AL+ FR+M G K + T+ L+ C + GR S +
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 383 ---TGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR-DTASW-----------NMMI 427
L D + T +V + + G +++A+++ + ++ D+ W N+ +
Sbjct: 522 DFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 428 GGYVKHGLGE 437
G YV L E
Sbjct: 580 GKYVAEKLLE 589
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 319/596 (53%), Gaps = 4/596 (0%)
Query: 7 VFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEK-KFSKFSLSTVLKGFANSG 65
VF M E N+ SWN L+ GYA+ G + M L+ M + K ++ VL+
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 66 YIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIIT 125
+ G+ VH +R G LD + +L+ MY KCG +A +F R+ D+++W A+I+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 126 CLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFES 185
+ G C E ++F MR SV P+ LTS++ A GD+R G IHA + GF
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 186 DTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML 245
D V N+L MY+ G ++F + +D VSW + S ++ PD+ + + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 246 LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLE 305
KP+ T +L AC++L D+ G +LH IK L +V +L++MY K C++
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 306 DAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCS 365
A F ++ K++ ++T+II AL R+M++ ++ N TL + L C+
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACA 509
Query: 366 PVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNM 425
+ L G+ +H+ ++TG LD F+ AL+ MY +CG ++ A + F S +D SWN+
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNI 568
Query: 426 MIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIY 485
++ GY + G G +E F M+ PDEITF+ +L CS ++ +G +FS ++ Y
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-Y 627
Query: 486 GITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKD 545
G+TP +KH+AC++D+LGRAG+ E FI + +TP+ VW LL AC H I+L E
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 546 AEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
A+ + EL+ K Y+ ++ A G+W + + VR ++ G+ + CSW+EV G
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 181/346 (52%), Gaps = 1/346 (0%)
Query: 130 QGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLV 189
G +EA K+ N M+E V ++ V +LVR Q G ++++ +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 190 GNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML-LKG 248
GNA ++M++ G + VF ++ ++ SWN L + D+ + ++++ML + G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 249 FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAG 308
KP++ TF +L+ C + D+ GK++H H +++ + + V +L+ MY K G ++ A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 309 VAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVA 368
+ FD + +D+ ++ A+I+ Y + G L+ F MR + + TL S ++ C +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 369 TLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIG 428
GR +H+ + TG +D+ V +L MY GS +AE +F +D SW MI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 429 GYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEG 474
GY + L +KA++ +RMM + PDEIT VLSAC+ +G ++ G
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/550 (24%), Positives = 260/550 (47%), Gaps = 20/550 (3%)
Query: 23 LNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHAMAIRLGC 82
L+G +G ++ M L SM+++ + +++ + G V+++A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 83 ALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFN- 141
+L L + + M+ + G +A VF ++ + ++ +W ++ +QG EA +++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 142 LMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENG 201
++ VKP+ + ++R D G+ +H + +YG+E D V NAL++MY++ G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 202 RVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILK 261
V +F+ + +D +SWNA+ S + + +GL +F+ M P++ T ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 262 ACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFA 321
AC L D G+ +HA+ I + V SL MY +G +A F + KD+ +
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 322 YTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAV 381
+T +I+ Y + A+ +R M + +K +E T+A+ L+ C+ + L G LH +A+
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 382 KTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALE 441
K + + V+ L+ MY+KC ID A +F ++ SW +I G L + E
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL---RLNNRCFE 482
Query: 442 A--FRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFACMI 498
A F + P+ IT L+AC+ +G + GK+ H ++ G+ + + ++
Sbjct: 483 ALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALL 540
Query: 499 DILGRAGKF-TEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKME 557
D+ R G+ T F ++ K + W LL S G ++EL +M
Sbjct: 541 DMYVRCGRMNTAWSQFNSQKK---DVTSWNILLTGYSERGQ-------GSMVVELFDRMV 590
Query: 558 SNYVFPSDIS 567
+ V P +I+
Sbjct: 591 KSRVRPDEIT 600
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 212/438 (48%), Gaps = 6/438 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+ +F MP +++SWNA+++GY E+G + + LF +M+ + +L++V+
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G + G+ +HA I G A+D + SL MY G A K+F R++ D+V+W +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I+ + +A + +M + SVKP++ + +++ A GD G +H + K
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
S +V N L++MY + + +F I ++ +SW ++ + + + L IF +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
+ +PN T L AC+ + + GK++HAH ++ + + + +L+DMY + G
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
+ A F+S KD+ ++ ++T Y++ G+ M ++ F +M ++ +E T S L G
Sbjct: 549 MNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 364 CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA-VFKGSALRDTAS 422
CS + G + S G ++ +V + + G + +A + K D A
Sbjct: 608 CSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 423 WNMMIGGYVKH---GLGE 437
W ++ H LGE
Sbjct: 668 WGALLNACRIHHKIDLGE 685
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 352 bits (902), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 330/606 (54%), Gaps = 12/606 (1%)
Query: 4 AKRVFKSMPEL---NVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
A+ VF++M +VVSW+A++ Y +G + +F ++ + + + V++
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 61 FANSGYIKAGQVVHAMAIRLG-CALDKFLSCSLVDMYSKCGLA-DNALKVFYRIKDPDVV 118
+NS ++ G+V ++ G D + CSL+DM+ K + +NA KVF ++ + +VV
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV 235
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W +IT Q G +EA + F M S + ++F L+S+ A E + G+ +H+
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 179 CKYGFESDTLVGNALVSMYME---NGRVSYGSRVFEAIAHQDSVSWNALFSRF-QDYESP 234
+ G D V +LV MY + +G V +VF+ + +SW AL + + ++
Sbjct: 296 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 235 DQGLRIFYQMLLKG-FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS 293
+ + +F +M+ +G +PN TF KAC +LSD GKQ+ K L N V S
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSN 353
++ M+ KS +EDA AF+SL+ K+L +Y + + E A K ++ + +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
FT AS L+G + V ++ G +HS VK G + V AL++MY+KCGSID A VF
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 414 GSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEE 473
R+ SW MI G+ KHG + LE F M++EG P+E+T+V +LSACSH+GL+ E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 474 GKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGAC 533
G +HF+S+ + + I P ++H+ACM+D+L RAG T+ FI + LVW LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 534 SWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPS 593
H N EL + A K+LEL+P + Y+ S+I A G+W + + +R + + + KE
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713
Query: 594 CSWIEV 599
CSWIEV
Sbjct: 714 CSWIEV 719
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 231/471 (49%), Gaps = 15/471 (3%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGF 61
E A +VF M ELNVV+W ++ + G ++ + F M + KF+LS+V
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 62 ANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKC---GLADNALKVFYRIKDPDVV 118
A + G+ +H+ AIR G D + CSLVDMY+KC G D+ KVF R++D V+
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRE----SSVKPNQFVLTSLVRATTETGDQRCGESI 174
+W A+IT + C A + NL E V+PN F +S +A D R G+ +
Sbjct: 338 SWTALITGYMKN--CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESP 234
K G S++ V N+++SM++++ R+ R FE+++ ++ VS+N +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 235 DQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSL 294
+Q ++ ++ + + TF +L +++ + G+Q+H+ +K L N V +L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 295 VDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
+ MY K G ++ A F+ + N+++ ++T++IT +A+ G A L+ F +M EG+K NE
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 355 FTLASCLNGCSPVATLANG-RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
T + L+ CS V ++ G R +S+ M +V + + G + DA
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 414 GSALR-DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLS 463
+ D W +G H E A R +L+ P+E + LS
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELD--PNEPAAYIQLS 684
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 159/607 (26%), Positives = 279/607 (45%), Gaps = 59/607 (9%)
Query: 4 AKRVFKSMP----ELNVVSWNALLNGYAESGDGQ-KVMHLFCSMKDMEKKFSKFSLSTVL 58
AK KS P +NV + L+ + +GD + V L +D + + S++L
Sbjct: 12 AKLPIKSQPSVSNRINVA--DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLL 69
Query: 59 KGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF---YRIKDP 115
K + + G++VHA I D L SL+ +YSK G + A VF R
Sbjct: 70 KSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 116 DVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIH 175
DVV+W A++ C G +A K+F E + PN + T+++RA + + G
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 176 AVICKYG-FESDTLVGNALVSMYMENGRVSYGS--RVFEAIAHQDSVSWNALFSRFQDYE 232
+ K G FESD VG +L+ M+++ G S+ + +VF+ ++ + V+W + +R
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 233 SPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGT 292
P + +R F M+L GF+ + T + AC+ L ++ GKQLH+ I+ L + V
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VEC 306
Query: 293 SLVDMYDK---SGCLEDAGVAFDSLANKDLFAYTAIITSYAQ-AGEAEMALKCFRKMRLE 348
SLVDMY K G ++D FD + + + ++TA+IT Y + A A+ F +M +
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 349 G-IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDD 407
G ++ N FT +S C ++ G+ + A K G + V+ ++++M+ K ++D
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 408 AEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSH 467
A+ F+ + ++ S+N + G ++ E+A + + + TF +LS ++
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 468 MGLIEEGKKHFSSIKKIYGIT---PTIKHFACM------IDILGRAGKFTEIENFITETK 518
+G I +G++ S + K+ G++ P M ID R F E N I+ T
Sbjct: 487 VGSIRKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 519 LT-------------------------PNALVWENLLGACSWHGNIELDEKDAEKLLE-- 551
+ PN + + +L ACS G + + + E
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 552 -LEPKME 557
++PKME
Sbjct: 606 KIKPKME 612
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 97/166 (58%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
ME A+R F+S+ E N+VS+N L+G + + ++ L + + E S F+ +++L G
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
AN G I+ G+ +H+ ++LG + ++ + +L+ MYSKCG D A +VF +++ +V++W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETG 166
++IT + G + FN M E VKPN+ +++ A + G
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++ A RVF M NV+SW +++ G+A+ G +V+ F M + K ++ + +L
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 61 FANSGYIKAG 70
++ G + G
Sbjct: 585 CSHVGLVSEG 594
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 326/610 (53%), Gaps = 19/610 (3%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKF-----SLSTVL 58
A ++F MPE N+VSWN+++ ++++G ++ L M + E F +L TVL
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME-ENGDGAFMPDVATLVTVL 299
Query: 59 KGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
A I G+ VH A++L + L+ +L+DMYSKCG NA +F + +VV
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRE-----SSVKPNQFVLTSLVRATTETGDQRCGES 173
+W ++ +G + F+++R+ VK ++ + + V +
Sbjct: 360 SWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 174 IHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYES 233
+H K F + LV NA V+ Y + G +SY RVF I + SWNAL
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 234 PDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS 293
P L QM + G P+ T +L ACS L + GK++H I++ L+ + V S
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSN 353
++ +Y G L FD++ +K L ++ +IT Y Q G + AL FR+M L GI+
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLL--DMFVSTALVAMYAKCGSIDDAEAV 411
++ CS + +L GR H+ A+K HLL D F++ +L+ MYAK GSI + V
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 412 FKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLI 471
F G + TASWN MI GY HGL ++A++ F M G+ PD++TF+ VL+AC+H GLI
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 472 EEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFIT-ETKLTPNALVWENLL 530
EG ++ +K +G+ P +KH+AC+ID+LGRAG+ + + E + +W++LL
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 531 GACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKK 590
+C H N+E+ EK A KL ELEP+ NYV S++ A G+W D VR ++ ++K
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Query: 591 EPSCSWIEVD 600
+ CSWIE++
Sbjct: 835 DAGCSWIELN 844
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 227/467 (48%), Gaps = 31/467 (6%)
Query: 39 FCSMKDMEKKFS-------------------KFSLSTVLKGFANSGYIKAGQVVHAM--- 76
FC D++K F + +L +L+ I+ G+ +H +
Sbjct: 53 FCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSG 112
Query: 77 AIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEA 136
+ RL D L ++ MY+ CG D++ VF ++ ++ W A+I+ + E
Sbjct: 113 STRLRN--DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEV 170
Query: 137 AKIF-NLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVS 195
+ F ++ + + P+ F +++A D G ++H ++ K G D VGNALVS
Sbjct: 171 LETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVS 230
Query: 196 MYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLK----GFKP 251
Y +G V+ ++F+ + ++ VSWN++ F D ++ + +M+ + F P
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 252 NMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAF 311
++ T + +L C+ ++G GK +H +K LD V+ +L+DMY K GC+ +A + F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 312 DSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRL--EGIKSNEFTLASCLNGCSPVAT 369
NK++ ++ ++ ++ G+ R+M E +K++E T+ + + C +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 370 LANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGG 429
L + + LH ++K + + V+ A VA YAKCGS+ A+ VF G + SWN +IGG
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 430 YVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
+ + +L+A M G +PD T +LSACS + + GK+
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 163/365 (44%), Gaps = 4/365 (1%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+ A+RVF + V SWNAL+ G+A+S D + + MK F++ ++L
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ ++ G+ VH IR D F+ S++ +Y CG +F ++D +V+W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+IT Q G A +F M ++ + + A + R G HA K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
+ E D + +L+ MY +NG ++ S+VF + + + SWNA+ + + + +++
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFG-KQLHAHTIKHSLDGNHVVGTSLVDMYD 299
F +M G P+ TF+ +L AC+ + G + L L N ++DM
Sbjct: 686 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLG 745
Query: 300 KSGCLEDA--GVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKM-RLEGIKSNEFT 356
++G L+ A VA + D+ + ++++S EM K K+ LE K +
Sbjct: 746 RAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYV 805
Query: 357 LASCL 361
L S L
Sbjct: 806 LLSNL 810
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 329/607 (54%), Gaps = 12/607 (1%)
Query: 3 LAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
A+++F MPE N++S+N+L++GY + G ++ M LF ++ K KF+ + L
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
+ G+++H + + G + FL L+DMYSKCG D A+ +F R + D V+W +
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRA---TTETGDQRCGESIHAVIC 179
+I+ + G +E + M + + L S+++A G G +IH
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDY-----ESP 234
K G E D +V AL+ MY +NG + ++F + ++ V++NA+ S F E+
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 235 DQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSL 294
+ ++F M +G +P+ TF V+LKACS+ + +G+Q+HA K++ + +G++L
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 295 VDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
+++Y G ED F S + +D+ ++T++I + Q + E A FR++ I+ E
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 355 FTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVS--TALVAMYAKCGSIDDAEAVF 412
+T++ ++ C+ A L++G + A+K+G +D F S T+ ++MYAK G++ A VF
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSG--IDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 413 KGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIE 472
D A+++ MI +HG +AL F M G P++ F+ VL AC H GL+
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Query: 473 EGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGA 532
+G K+F +K Y I P KHF C++D+LGR G+ ++ EN I + + + W LL +
Sbjct: 578 QGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 533 CSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEP 592
C + + + ++ AE+L+ELEP+ +YV +I G + VR L+ +G+KKEP
Sbjct: 638 CRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEP 697
Query: 593 SCSWIEV 599
+ SWI +
Sbjct: 698 ALSWIVI 704
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/578 (25%), Positives = 268/578 (46%), Gaps = 47/578 (8%)
Query: 62 ANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWG 121
A SG + G++ H I+ +L +L++MY KC A ++F R+ + +++++
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 122 AIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKY 181
++I+ Q G ++A ++F RE+++K ++F + E D GE +H ++
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 182 GFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
G + N L+ MY + G++ +F+ +D VSWN+L S + + ++ L +
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 242 YQMLLKGFKPNMCTFIV--ILKACSSLSDVGF---GKQLHAHTIKHSLDGNHVVGTSLVD 296
+M G N+ T+ + +LKAC + GF G +H +T K ++ + VV T+L+D
Sbjct: 238 AKMHRDGL--NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295
Query: 297 MYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGE-----AEMALKCFRKMRLEGIK 351
MY K+G L++A F + +K++ Y A+I+ + Q E + A K F M+ G++
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 352 SNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAV 411
+ T + L CS TL GR +H++ K D F+ +AL+ +YA GS +D
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 412 FKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLI 471
F ++ +D ASW MI +V++ E A + FR + P+E T +++SAC+ +
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 472 EEGKK-----------HFSSIKK-------------------IYGITPTIKHFACMIDIL 501
G++ F+S+K I P + ++ MI L
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 502 GRAGKFTEIENFITETK---LTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMES 558
+ G E N K + PN + +L AC HG + + ++ + ++
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC-HGGLVTQGLKYFQCMKNDYRINP 594
Query: 559 NYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSW 596
N + + GR S L+ S G + P +W
Sbjct: 595 NEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP-VTW 631
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 219/460 (47%), Gaps = 17/460 (3%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++ A +F E + VSWN+L++GY G ++ ++L M + ++L +VLK
Sbjct: 199 LDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
Query: 61 FA---NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDV 117
N G+I+ G +H +LG D + +L+DMY+K G A+K+F + +V
Sbjct: 259 CCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Query: 118 VAWGAIITCLDQQG-----CCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGE 172
V + A+I+ Q EA K+F M+ ++P+ + +++A + G
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 173 SIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYE 232
IHA+ICK F+SD +G+AL+ +Y G G + F + + QD SW ++ E
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438
Query: 233 SPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGT 292
+ +F Q+ +P T +++ AC+ + + G+Q+ + IK +D V T
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 293 SLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKS 352
S + MY KSG + A F + N D+ Y+A+I+S AQ G A AL F M+ GIK
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 353 NEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVS--TALVAMYAKCGSIDDAEA 410
N+ L C + G L + +K + ++ T LV + + G + DAE
Sbjct: 559 NQQAFLGVLIACCHGGLVTQG-LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 411 VFKGSALRD-TASWNMMIGG---YVKHGLGEKALEAFRMM 446
+ S +D +W ++ Y +G++ E R+M
Sbjct: 618 LILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAE--RLM 655
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 4/257 (1%)
Query: 256 FIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLA 315
+ ++ + + V GK H H IK SL+ + +L++MY K L A FD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 316 NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRL 375
+++ ++ ++I+ Y Q G E A++ F + R +K ++FT A L C L G L
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 376 LHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGL 435
LH + V G +F+ L+ MY+KCG +D A ++F RD SWN +I GYV+ G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 436 GEKALEAFRMMLDEGYVPDEITFVVVLSACS---HMGLIEEGKKHFSSIKKIYGITPTIK 492
E+ L M +G VL AC + G IE+G K+ G+ I
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL-GMEFDIV 288
Query: 493 HFACMIDILGRAGKFTE 509
++D+ + G E
Sbjct: 289 VRTALLDMYAKNGSLKE 305
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 313/585 (53%), Gaps = 2/585 (0%)
Query: 16 VVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHA 75
++ N L+ Y SG ++ F M + + + + + +L + GQ VH
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 76 MAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQE 135
MA++LG L +S SL++MY K A VF + + D+++W ++I + Q G E
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 136 AAKIFNLMRESSVKPNQFVLTSLVRATTETGD-QRCGESIHAVICKYGFESDTLVGNALV 194
A +F + +KP+Q+ +TS+++A + + + +H K SD+ V AL+
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 195 SMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMC 254
Y N + +FE + D V+WNA+ + + + L++F M +G + +
Sbjct: 460 DAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 255 TFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSL 314
T + K C L + GKQ+HA+ IK D + V + ++DMY K G + A AFDS+
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 315 ANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGR 374
D A+T +I+ + GE E A F +MRL G+ +EFT+A+ S + L GR
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 375 LLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHG 434
+H+ A+K D FV T+LV MYAKCGSIDDA +FK + + +WN M+ G +HG
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 435 LGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHF 494
G++ L+ F+ M G PD++TF+ VLSACSH GL+ E KH S+ YGI P I+H+
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 495 ACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEP 554
+C+ D LGRAG + EN I + +A ++ LL AC G+ E ++ A KLLELEP
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 555 KMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
S YV S++ A +W++ R ++ +KK+P SWIEV
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEV 863
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 258/544 (47%), Gaps = 43/544 (7%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDG-----QKVMHLFCSMKDMEKKFSKFSLSTVL 58
A+RVF MP+ ++VSWN++L YA+S + Q+ LF ++ S+ +LS +L
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 59 KGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
K +SGY+ A + H A ++G D+F++ +LV++Y K G +F + DVV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W ++ + G +EA + + S + PN+ L L R + + D +S A
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSF-ANG 271
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
S+ + N +S Y+ +G+ ++AL L
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQ------------------YSAL-------------L 300
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+ F M+ + + TFI++L + + G+Q+H +K LD V SL++MY
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K A FD+++ +DL ++ ++I AQ G A+ F ++ G+K +++T+
Sbjct: 361 CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 359 SCLNGCSPVAT-LANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
S L S + L+ + +H A+K ++ D FVSTAL+ Y++ + +AE +F+
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK- 476
D +WN M+ GY + G K L+ F +M +G D+ T V C + I +GK+
Sbjct: 481 -DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 477 HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWH 536
H +IK Y + + + ++D+ + G + + F ++ P+ + W ++ C +
Sbjct: 540 HAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQ-FAFDSIPVPDDVAWTTMISGCIEN 596
Query: 537 GNIE 540
G E
Sbjct: 597 GEEE 600
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 194/432 (44%), Gaps = 39/432 (9%)
Query: 58 LKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDV 117
L+ S + G+ HA + ++FL +L+ MYSKCG A +VF ++ D D+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 118 VAWGAIITCLDQQGCC-----QEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGE 172
V+W +I+ Q C Q+A +F ++R+ V ++ L+ +++ +G E
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 173 SIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYE 232
S H CK G + D V ALV++Y++ G+V G +FE + ++D V WN + + +
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 233 SPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGT 292
++ + + G PN T ++ + SD G +K +GN
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG--------QVKSFANGNDASSV 277
Query: 293 SLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKS 352
S + +K ++ Y +G+ LKCF M ++
Sbjct: 278 SEIIFRNKG------------------------LSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 353 NEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVF 412
++ T L V +LA G+ +H +A+K G L + VS +L+ MY K A VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 413 KGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM--GL 470
+ RD SWN +I G ++GL +A+ F +L G PD+ T VL A S + GL
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 471 IEEGKKHFSSIK 482
+ H +IK
Sbjct: 434 SLSKQVHVHAIK 445
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 14 LNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVV 73
++V+WNA++ GY +S DG K + LF M ++ F+L+TV K I G+ V
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 74 HAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCC 133
HA AI+ G LD ++S ++DMY KCG A F I PD VAW +I+ + G
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEE 599
Query: 134 QEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNAL 193
+ A +F+ MR V P++F + +L +A++ G IHA K +D VG +L
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSL 659
Query: 194 VSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNM 253
V MY + G + +F+ I + +WNA+ + + L++F QM G KP+
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 254 CTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVG------TSLVDMYDKSGCLEDA 307
TFI +L ACS G + + H S+ G++ + + L D ++G ++ A
Sbjct: 720 VTFIGVLSACSH---SGLVSEAYKHM--RSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 308 GVAFDSLA-NKDLFAYTAIITSYAQAGEAEMALKCFRK-MRLEGIKSNEFTLAS 359
+S++ Y ++ + G+ E + K + LE + S+ + L S
Sbjct: 775 ENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M A+ F S+P + V+W +++G E+G+ ++ H+F M+ M +F+++T+ K
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ ++ G+ +HA A++L C D F+ SLVDMY+KCG D+A +F RI+ ++ AW
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETG 166
A++ L Q G +E ++F M+ +KP++ ++ A + +G
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 320/599 (53%), Gaps = 2/599 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+ VF MPE N+VS+ +++ GY+++G G + + L+ M + +F+ +++K A+
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
S + G+ +HA I+L + +L+ MY + +A +VFY I D+++W +I
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSV-KPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
I Q G EA M V PN+++ S ++A + G IH + K
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
+ + G +L MY G ++ RVF+ I D+ SWN + + + D+ + +F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 243 QMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSG 302
QM GF P+ + +L A + + G Q+H++ IK + V SL+ MY
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 303 CLEDAGVAFDSLANK-DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
L F+ N D ++ I+T+ Q + L+ F+ M + + + T+ + L
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 362 NGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTA 421
GC +++L G +H ++KTG + F+ L+ MYAKCGS+ A +F RD
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVV 540
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSI 481
SW+ +I GY + G GE+AL F+ M G P+ +TFV VL+ACSH+GL+EEG K ++++
Sbjct: 541 SWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
Query: 482 KKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIEL 541
+ +GI+PT +H +C++D+L RAG+ E E FI E KL P+ +VW+ LL AC GN+ L
Sbjct: 601 QTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHL 660
Query: 542 DEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVD 600
+K AE +L+++P + +V + A+ G W + + +R+ + +KK P SWIE++
Sbjct: 661 AQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 228/449 (50%), Gaps = 9/449 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESG-DGQKVMHLFCSMKDMEKKFSKFSLSTVLK 59
M A RVF +P +++SW++++ G+++ G + + + HL + +++ + LK
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
++ G +H + I+ A + CSL DMY++CG ++A +VF +I+ PD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W II L G EA +F+ MR S P+ L SL+ A T+ G IH+ I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQ-DSVSWNALFSRFQDYESPDQGL 238
K+GF +D V N+L++MY + +FE + DSVSWN + + +E P + L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
R+F ML+ +P+ T +L+ C +S + G Q+H +++K L + L+DMY
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K G L A FDS+ N+D+ +++ +I YAQ+G E AL F++M+ GI+ N T
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVS--TALVAMYAKCGSIDDAEAVFKGSA 416
L CS V + G L++ ++T H + + +V + A+ G +++AE
Sbjct: 579 GVLTACSHVGLVEEGLKLYA-TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK 637
Query: 417 LR-DTASWNMMIGGYVKHG---LGEKALE 441
L D W ++ G L +KA E
Sbjct: 638 LEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 263/558 (47%), Gaps = 30/558 (5%)
Query: 44 DMEKKFSKFSLS-----TVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSK 98
D +K S F + +++ ++S + G+ +H + C D L+ ++ MY K
Sbjct: 55 DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGK 114
Query: 99 CGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSL 158
CG +A +VF + + ++V++ ++IT Q G EA +++ M + + P+QF S+
Sbjct: 115 CGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI 174
Query: 159 VRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDS 218
++A + D G+ +HA + K S + NAL++MY+ ++S SRVF I +D
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 219 VSWNALFSRFQDYESPDQGLRIFYQMLLKG-FKPNMCTFIVILKACSSLSDVGFGKQLHA 277
+SW+++ + F + L +ML G F PN F LKACSSL +G Q+H
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 278 HTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEM 337
IK L GN + G SL DMY + G L A FD + D ++ II A G A+
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 338 ALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVA 397
A+ F +MR G + +L S L + L+ G +HS +K G L D+ V +L+
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 398 MYAKCGSID---DAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPD 454
MY C + + F+ +A D+ SWN ++ ++H + L F++ML PD
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNA--DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPD 472
Query: 455 EITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENF 513
IT +L C + ++ G + H S+K G+ P +ID+ + G +
Sbjct: 473 HITMGNLLRGCVEISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARR- 529
Query: 514 ITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRW 573
I ++ + + W L+ + G E+ L L +M+S + P+ ++
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGF-------GEEALILFKEMKSAGIEPNHVT------ 576
Query: 574 NDFSGVRALLSSQGIKKE 591
F GV S G+ +E
Sbjct: 577 --FVGVLTACSHVGLVEE 592
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 194/405 (47%), Gaps = 3/405 (0%)
Query: 134 QEAAKIFNL-MRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNA 192
+EA + F+ + SS K SL+ A + + G IH I + DT++ N
Sbjct: 48 REALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 193 LVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPN 252
++SMY + G + VF+ + ++ VS+ ++ + + + +R++ +ML + P+
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 253 MCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFD 312
F I+KAC+S SDVG GKQLHA IK + + +L+ MY + + DA F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 313 SLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGI-KSNEFTLASCLNGCSPVATLA 371
+ KDL ++++II ++Q G AL ++M G+ NE+ S L CS +
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 372 NGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYV 431
G +H + +K+ + +L MYA+CG ++ A VF DTASWN++I G
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 432 KHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTI 491
+G ++A+ F M G++PD I+ +L A + + +G + S I K +G +
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADL 406
Query: 492 KHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWH 536
++ + N + + +++ W +L AC H
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 316/610 (51%), Gaps = 16/610 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+ A++VF M N V+ N L+ G G++ LF M M S S +L
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSS 317
Query: 61 F-----ANSGYIKAGQVVHAMAIRLGCALDKFL---SCSLVDMYSKCGLADNALKVFYRI 112
F A +K G+ VH I G L F+ LV+MY+KCG +A +VFY +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTG--LVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 113 KDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGE 172
D D V+W ++IT LDQ GC EA + + MR + P F L S + + + G+
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 173 SIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYE 232
IH K G + + V NAL+++Y E G ++ ++F ++ D VSWN++ E
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 233 -SPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVG 291
S + + F G K N TF +L A SSLS GKQ+H +K+++
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555
Query: 292 TSLVDMYDKSGCLEDAGVAFDSLA-NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGI 350
+L+ Y K G ++ F +A +D + ++I+ Y AL M G
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 351 KSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA 410
+ + F A+ L+ + VATL G +H+ +V+ D+ V +ALV MY+KCG +D A
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMM-LDEGYVPDEITFVVVLSACSHMG 469
F +R++ SWN MI GY +HG GE+AL+ F M LD PD +TFV VLSACSH G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 470 LIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENL 529
L+EEG KHF S+ YG+ P I+HF+CM D+LGRAG+ ++E+FI + + PN L+W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 530 LGACSWHG--NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQG 587
LGAC EL +K AE L +LEP+ NYV ++ A GRW D R +
Sbjct: 796 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855
Query: 588 IKKEPSCSWI 597
+KKE SW+
Sbjct: 856 VKKEAGYSWV 865
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 272/547 (49%), Gaps = 30/547 (5%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKK--FS-KFSLSTVLKG 60
A++VF MP N VSW +++GY+ +G+ ++ + ++DM K+ FS +++ +VL+
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVF---LRDMVKEGIFSNQYAFVSVLRA 111
Query: 61 FANSGYIKA--GQVVHAMAIRLGCALDKFLSCSLVDMYSKC-GLADNALKVFYRIKDPDV 117
G + G+ +H + +L A+D +S L+ MY KC G AL F I+ +
Sbjct: 112 CQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS 171
Query: 118 VAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRA--TTETGDQRCGESIH 175
V+W +II+ Q G + A +IF+ M+ +P ++ SLV + D R E I
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIM 231
Query: 176 AVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPD 235
I K G +D VG+ LVS + ++G +SY +VF + +++V+ N L + +
Sbjct: 232 CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 236 QGLRIFYQM-LLKGFKPNMCTFIVILKACSSLS---DVGF--GKQLHAHTIKHSLDGNHV 289
+ ++F M + P +++++L + S +VG G+++H H I L V
Sbjct: 292 EATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 290 -VGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE 348
+G LV+MY K G + DA F + +KD ++ ++IT Q G A++ ++ MR
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 349 GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDA 408
I FTL S L+ C+ + G+ +H ++K G L++ VS AL+ +YA+ G +++
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 409 EAVFKGSALRDTASWNMMIGGYVKHGLGEKAL-EAFRMMLD---EGYVPDEITFVVVLSA 464
+F D SWN +IG + E++L EA L+ G + ITF VLSA
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALAR---SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 465 CSHMGLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNA 523
S + E GK+ H ++K T ++ +I G+ G+ E + +
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 524 LVWENLL 530
+ W +++
Sbjct: 585 VTWNSMI 591
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 216/483 (44%), Gaps = 22/483 (4%)
Query: 65 GYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAII 124
G+ A + H+ + D +L +L++ Y + G + +A KVF + + V+W I+
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 125 TCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRC--GESIHAVICKYG 182
+ + G +EA M + + NQ+ S++RA E G G IH ++ K
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 183 FESDTLVGNALVSMYMEN-GRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
+ D +V N L+SMY + G V Y F I ++SVSWN++ S + RIF
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLS--DVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
M G +P TF ++ SL+ DV +Q+ K L + VG+ LV +
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMR-LEGIKSNEFTLA 358
KSG L A F+ + ++ ++ + E A K F M + + + +
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI- 313
Query: 359 SCLNGCSPVATLA------NGRLLHSIAVKTGHLLDMFV--STALVAMYAKCGSIDDAEA 410
L P +LA GR +H + TG L+D V LV MYAKCGSI DA
Sbjct: 314 --LLSSFPEYSLAEEVGLKKGREVHGHVITTG-LVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGL 470
VF +D+ SWN MI G ++G +A+E ++ M +P T + LS+C+ +
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 471 IEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENL 529
+ G++ H S+K GI + ++ + G E + + + W ++
Sbjct: 431 AKLGQQIHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSI 487
Query: 530 LGA 532
+GA
Sbjct: 488 IGA 490
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 254 CTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDS 313
C + +++C + G + H+ K+ LD + + +L++ Y ++G A FD
Sbjct: 4 CVPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDE 61
Query: 314 LANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLA-- 371
+ ++ ++ I++ Y++ GE + AL R M EGI SN++ S L C + ++
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 372 NGRLLHSIAVKTGHLLDMFVSTALVAMYAKC-GSIDDAEAVFKGSALRDTASWNMMIGGY 430
GR +H + K + +D VS L++MY KC GS+ A F ++++ SWN +I Y
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 431 VKHGLGEKALEAFRMMLDEGYVPDEITF-VVVLSACS 466
+ G A F M +G P E TF +V +ACS
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 321/601 (53%), Gaps = 2/601 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFS--LSTVL 58
+ A++VF MP ++VSW +++ Y + + + + LF +M+ ++ S + LS VL
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 59 KGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
K S I G+ +HA A++ ++ SL+DMY + G D + +VF + + V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W AIIT L G +E F+ M S + + ++A + G++IH +
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
GF + V N+L +MY E G + G +FE ++ +D VSW +L ++ + +
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
F +M PN TF + AC+SLS + +G+QLH + + L+ + V S++ MY
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
G L A V F + +D+ +++ II Y QAG E K F MR G K +F LA
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
S L+ +A + GR +H++A+ G + V ++L+ MY+KCGSI +A +F +
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
D S MI GY +HG ++A++ F L G+ PD +TF+ VL+AC+H G ++ G +F
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
+ +++ Y + P +H+ CM+D+L RAG+ ++ E I E + +VW LL AC G+
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
IE + AE++LEL+P + V ++I ++ G + + VR + ++G+ KEP S I+
Sbjct: 596 IERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIK 655
Query: 599 V 599
+
Sbjct: 656 I 656
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 2/288 (0%)
Query: 191 NALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLL--KG 248
N+ + + G + +VF+ + H D VSW ++ R+ + D+ L +F M +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 249 FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAG 308
P+ V+LKAC S++ +G+ LHA+ +K SL + VG+SL+DMY + G ++ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 309 VAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVA 368
F + ++ +TAIIT AG + L F +M S+ +T A L C+ +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 369 TLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIG 428
+ G+ +H+ + G + + V+ +L MY +CG + D +F+ + RD SW +I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 429 GYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
Y + G KA+E F M + P+E TF + SAC+ + + G++
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 190/600 (31%), Positives = 317/600 (52%), Gaps = 8/600 (1%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M A VF +P +VVSW +L+GY +S D + +F M+ + + ++++V+
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKD---PDV 117
+ VHA + G LD ++ +L+ MYSK G D + +VF + D ++
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 118 VAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAV 177
V +IT Q +A ++F M + ++ ++F + SL+ G+ +H
Sbjct: 421 V--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL---NLGKQVHGY 475
Query: 178 ICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQG 237
K G D VG++L ++Y + G + ++F+ I +D+ W ++ S F +Y +
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 238 LRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDM 297
+ +F +ML G P+ T +L CSS + GK++H +T++ +D +G++LV+M
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 298 YDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTL 357
Y K G L+ A +D L D + +++I+ Y+Q G + FR M + G + F +
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
+S L + + G +H+ K G + V ++L+ MY+K GSIDD F
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
D +W +I Y +HG +AL+ + +M ++G+ PD++TFV VLSACSH GL+EE H
Sbjct: 716 PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFH 775
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
+S+ K YGI P +H+ CM+D LGR+G+ E E+FI + P+ALVW LL AC HG
Sbjct: 776 LNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG 835
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
+EL + A+K +ELEP Y+ S+I A G W++ R L+ G++KEP S +
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 274/582 (47%), Gaps = 56/582 (9%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGF 61
E A +VF+ NV WN ++ G + + V LF M +K ++ S+VL
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 62 ANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWG 121
A+ ++ G+VV A I+ G A D F+ ++VD+Y+KCG A++VF RI +P VV+W
Sbjct: 262 ASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 122 AIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKY 181
+++ + A +IF MR S V+ N +TS++ A +HA + K
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 182 GFESDTLVGNALVSMYMENGRVSYGSRVFE---AIAHQDSVSWNALFSRFQDYESPDQGL 238
GF D+ V AL+SMY ++G + +VFE I Q+ V N + + F + P + +
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 239 RIFYQMLLKGFKPN---MCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLV 295
R+F +ML +G + + +C+ + +L + GKQ+H +T+K L + VG+SL
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDC------LNLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 296 DMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEF 355
+Y K G LE++ F + KD + ++I+ + + G A+ F +M +G +E
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 356 TLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGS 415
TLA+ L CS +L G+ +H ++ G M + +ALV MY+KCGS+ A V+
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 416 ALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSAC---------- 465
D S + +I GY +HGL + FR M+ G+ D +L A
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 466 -------------------------SHMGLIEEGKKHFSSIK--KIYGITPTIKHFACMI 498
S G I++ K FS I + T I +A
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH- 731
Query: 499 DILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIE 540
G+A + ++ N + E P+ + + +L ACS G +E
Sbjct: 732 ---GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 242/480 (50%), Gaps = 11/480 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M A ++F ++P+ +VVS N +++GY + ++ + F M + + ++ S +V+
Sbjct: 100 MADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISA 159
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ ++V I++G + + +L+D++SK ++A KVF +V W
Sbjct: 160 CSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCW 219
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSV---KPNQFVLTSLVRATTETGDQRCGESIHAV 177
II + Q +F+L E V KP+ + +S++ A R G+ + A
Sbjct: 220 NTIIAGALRN---QNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQAR 276
Query: 178 ICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQG 237
+ K G E D V A+V +Y + G ++ VF I + VSW + S +
Sbjct: 277 VIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Query: 238 LRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDM 297
L IF +M G + N CT ++ AC S V Q+HA K + V +L+ M
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISM 395
Query: 298 YDKSGCLEDAGVAFDSLAN-KDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFT 356
Y KSG ++ + F+ L + + +ITS++Q+ + A++ F +M EG++++EF+
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 357 LASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSA 416
+ S L S + L G+ +H +K+G +LD+ V ++L +Y+KCGS++++ +F+G
Sbjct: 456 VCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIP 512
Query: 417 LRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
+D A W MI G+ ++G +A+ F MLD+G PDE T VL+ CS + GK+
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 198/397 (49%), Gaps = 10/397 (2%)
Query: 79 RLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAK 138
R D FL+ SL+ YS G +A K+F I PDVV+ +I+ Q +E+ +
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 139 IFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYM 198
F+ M + N+ S++ A + E + K G+ +V +AL+ ++
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 199 ENGRVSYGSRVFEAIAHQDSVSWNALFS---RFQDYESPDQGLRIFYQMLLKGFKPNMCT 255
+N R +VF + WN + + R Q+Y + +F++M + KP+ T
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV---FDLFHEMCVGFQKPDSYT 253
Query: 256 FIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLA 315
+ +L AC+SL + FGK + A IK + + V T++VD+Y K G + +A F +
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 316 NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRL 375
N + ++T +++ Y ++ +A AL+ F++MR G++ N T+ S ++ C + +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 376 LHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG-SALRDTASWNMMIGGYVKHG 434
+H+ K+G LD V+ AL++MY+K G ID +E VF+ ++ N+MI + +
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSK 432
Query: 435 LGEKALEAFRMMLDEGYVPDEITFVVVLSA--CSHMG 469
KA+ F ML EG DE + +LS C ++G
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 1/297 (0%)
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
+Y D + +L+S Y +G ++ +++F+ I D VS N + S ++ + ++ LR
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
F +M GF+ N ++ ++ ACS+L F + + HTIK VV ++L+D++
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLAS 359
K+ EDA F + +++ + II + F +M + K + +T +S
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 360 CLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRD 419
L C+ + L G+++ + +K G D+FV TA+V +YAKCG + +A VF
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 420 TASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
SW +M+ GY K ALE F+ M G + T V+SAC ++ E +
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 317/602 (52%), Gaps = 8/602 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+++F M + ++ WN LL + ++V++ F M E+K F+L LK
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 64 SGYIKAGQVVHAMA---IRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ G+++H + LG D ++ SL+ MY KCG AL++F ++ PD+V W
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGS--DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 121 GAIITCLDQQGCCQEAAKIFNLM-RESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
++++ ++ G +A + F M S V P++ L +LV A T+ + R G +H +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
+ GF +D + N+L++ Y ++ +F+ IA +D +SW+ + + + + + L
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
+F M+ G +PN+ T + +L+AC++ D+ G++ H I+ L+ V T+LVDMY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEG-IKSNEFTLA 358
K E+A F + KD+ ++ A+I+ + G A +++ F M LE + + +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
L CS + L + HS +K G + F+ +LV +Y++CGS+ +A VF G AL+
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYV-PDEITFVVVLSACSHMGLIEEGKKH 477
DT W +I GY HG G KALE F M+ V P+E+TF+ +LSACSH GLI EG +
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
F + Y + P ++H+A ++D+LGR G +P + LLGAC H
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
N E+ E A+KL ELE Y+ S++ +G W + +R + +GIKK + S I
Sbjct: 551 NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Query: 598 EV 599
E+
Sbjct: 611 EI 612
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 229/467 (49%), Gaps = 11/467 (2%)
Query: 104 NALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATT 163
+A ++F + + W ++ L ++ +E F+ M KP+ F L ++A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 164 ETGDQRCGESIHAVICK-YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWN 222
E + GE IH + K SD VG++L+ MY++ GR+ R+F+ + D V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 223 ALFSRFQDYESPDQGLRIFYQMLLKG-FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIK 281
++ S F+ SP Q + F +M++ P+ T I ++ AC+ LS+ G+ +H I+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 282 HSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKC 341
+ + SL++ Y KS ++A F +A KD+ +++ +I Y Q G A AL
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 342 FRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAK 401
F M +G + N T+ L C+ L GR H +A++ G ++ VSTALV MY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 402 CGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYV-PDEITFVV 460
C S ++A AVF +D SW +I G+ +G+ +++E F +ML E PD I V
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 461 VLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLT 520
VL +CS +G +E+ K S + K YG A ++++ R G L
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 521 PNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDIS 567
+ +VW +L+ HG K + L ++S+ V P++++
Sbjct: 431 -DTVVWTSLITGYGIHG------KGTKALETFNHMVKSSEVKPNEVT 470
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSM-KDMEKKFSKFSLSTVLKG 60
E A VF +P +VVSW AL++G+ +G + + F M + + + VL
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ G+++ + H+ I+ G + F+ SLV++YS+CG NA KVF I D V W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESS-VKPNQFVLTSLVRATTETG 166
++IT G +A + FN M +SS VKPN+ S++ A + G
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 401 KCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVV 460
K S DA +F R WN ++ + E+ L F M + PD T V
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 461 VLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLT 520
L AC + + G+ +KK + + + +I + + G+ E E +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-K 124
Query: 521 PNALVWENLLGACSWHGN 538
P+ + W +++ +G+
Sbjct: 125 PDIVTWSSMVSGFEKNGS 142
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 302/552 (54%), Gaps = 4/552 (0%)
Query: 53 SLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRI 112
+L ++L+ G G VH ++ G L+ S L+DMY KC A KVF +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 113 KDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGE 172
+ +VV+W A+++ G + + +F+ M + PN+F ++ ++A G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 173 SIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYE 232
IH K GFE VGN+LV MY + GR++ +VF I + +SWNA+ + F
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 233 SPDQGLRIFYQMLLKGFK--PNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLD--GNH 288
+ L F M K P+ T +LKACSS + GKQ+H ++ +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 289 VVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE 348
+ SLVD+Y K G L A AFD + K + +++++I YAQ GE A+ F++++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 349 GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDA 408
+ + F L+S + + A L G+ + ++AVK L+ V ++V MY KCG +D+A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 409 EAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
E F L+D SW ++I GY KHGLG+K++ F ML PDE+ ++ VLSACSH
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 469 GLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWEN 528
G+I+EG++ FS + + +GI P ++H+AC++D+LGRAG+ E ++ I + PN +W+
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 529 LLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGI 588
LL C HG+IEL ++ + LL ++ K +NYV S++ G WN+ R L + +G+
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 589 KKEPSCSWIEVD 600
KKE SW+E++
Sbjct: 548 KKEAGMSWVEIE 559
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 226/451 (50%), Gaps = 6/451 (1%)
Query: 3 LAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
+A +VF SMPE NVVSW+AL++G+ +GD + + LF M ++F+ ST LK
Sbjct: 59 MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
++ G +H +++G + + SLVDMYSKCG + A KVF RI D +++W A
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVK--PNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I G +A F +M+E+++K P++F LTSL++A + TG G+ IH + +
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 181 YGFE--SDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
GF S + +LV +Y++ G + + F+ I + +SW++L + + +
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+F ++ + + I+ + + + GKQ+ A +K V S+VDMY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K G +++A F + KD+ ++T +IT Y + G + +++ F +M I+ +E
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTA-LVAMYAKCGSIDDAEAVFKGSAL 417
+ L+ CS + G L S ++T + A +V + + G + +A+ + +
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 418 R-DTASWNMMIGGYVKHGLGEKALEAFRMML 447
+ + W ++ HG E E +++L
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILL 509
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Query: 350 IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAE 409
I + L S L C+ G +H +K+G L++ S L+ MY KC A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 410 AVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMG 469
VF R+ SW+ ++ G+V +G + +L F M +G P+E TF L AC +
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 470 LIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIE----NFITETKLTPNALV 525
+E+G + KI G ++ ++D+ + G+ E E + + ++ NA++
Sbjct: 122 ALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 318/602 (52%), Gaps = 3/602 (0%)
Query: 3 LAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
+ +R+++ +V +WN + D + + LF MK + + F+ V K A
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
+ ++VHA I+ D F+ + VDM+ KC D A KVF R+ + D W A
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+++ Q G +A +F MR + + P+ + +L+++ + + E++HAV + G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDS--VSWNALFSRFQDYESPDQGLRI 240
+ V N +S Y + G + VFEAI D VSWN++F + + +
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
+ ML + FKP++ TFI + +C + + G+ +H+H I D + + + MY K
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
S A + FD + ++ ++T +I+ YA+ G+ + AL F M G K + TL S
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 361 LNGCSPVATLANGRLLHSIAVKTGHLLD-MFVSTALVAMYAKCGSIDDAEAVFKGSALRD 419
++GC +L G+ + + A G D + + AL+ MY+KCGSI +A +F + +
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 420 TASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFS 479
+W MI GY +G+ +AL+ F M+D Y P+ ITF+ VL AC+H G +E+G ++F
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 480 SIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNI 539
+K++Y I+P + H++CM+D+LGR GK E I P+A +W LL AC H N+
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 540 ELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
++ E+ AE L LEP+M + YV ++I A G W+ F+ +R+++ + IKK P S I+V
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Query: 600 DG 601
+G
Sbjct: 604 NG 605
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 206/453 (45%), Gaps = 12/453 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
++ A +VF+ MPE + +WNA+L+G+ +SG K LF M+ E ++ T+++
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIK--DPDVV 118
+ +K + +HA+ IRLG + ++ + + Y KCG D+A VF I D VV
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
+W ++ G +A ++ LM KP+ +L + G IH+
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
G + D N +SMY ++ +F+ + + VSW + S + + D+ L
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHT-IKHSLDGNHVVGTSLVDM 297
+F+ M+ G KP++ T + ++ C + GK + A I N ++ +L+DM
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 298 YDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTL 357
Y K G + +A FD+ K + +T +I YA G ALK F KM K N T
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHL---LDMFVSTALVAMYAKCGSIDDA-EAVFK 413
+ L C+ +L G I + ++ LD + + +V + + G +++A E +
Sbjct: 463 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY--SCMVDLLGRKGKLEEALELIRN 520
Query: 414 GSALRDTASWNMMIGGYVKH---GLGEKALEAF 443
SA D W ++ H + E+A E+
Sbjct: 521 MSAKPDAGIWGALLNACKIHRNVKIAEQAAESL 553
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 309/586 (52%), Gaps = 37/586 (6%)
Query: 50 SKFSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF 109
SK + T++K + +HA IR +L + ++ +Y+ L AL +F
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLF 62
Query: 110 YRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQR 169
+K P V+AW ++I C Q +A F MR S P+ V S++++ T D R
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 170 CGESIHAVICKYGFESDTLVGNALVSMYME----NGRVSYGS------------------ 207
GES+H I + G + D GNAL++MY + ++S G+
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 208 --------------RVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNM 253
RVFE + +D VS+N + + + + LR+ +M KP+
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 254 CTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDS 313
T +L S DV GK++H + I+ +D + +G+SLVDMY KS +ED+ F
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 314 LANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANG 373
L +D ++ +++ Y Q G AL+ FR+M +K +S + C+ +ATL G
Sbjct: 303 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362
Query: 374 RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKH 433
+ LH ++ G ++F+++ALV MY+KCG+I A +F + D SW +I G+ H
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 434 GLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKH 493
G G +A+ F M +G P+++ FV VL+ACSH+GL++E +F+S+ K+YG+ ++H
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 494 FACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELE 553
+A + D+LGRAGK E NFI++ + P VW LL +CS H N+EL EK AEK+ ++
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVD 542
Query: 554 PKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
+ YV ++ A+ GRW + + +R + +G++K+P+CSWIE+
Sbjct: 543 SENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 5 KRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANS 64
+RVF+ MP +VVS+N ++ GYA+SG + + + M + K F+LS+VL F+
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 65 GYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAII 124
+ G+ +H IR G D ++ SLVDMY+K +++ +VF R+ D ++W +++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 125 TCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFE 184
Q G EA ++F M + VKP +S++ A G+ +H + + GF
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 185 SDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQM 244
S+ + +ALV MY + G + ++F+ + D VSW A+ + + + +F +M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 245 LLKGFKPNMCTFIVILKACS--SLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSG 302
+G KPN F+ +L ACS L D +G ++ T + L+ ++ D+ ++G
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWG-YFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 303 CLEDA 307
LE+A
Sbjct: 495 KLEEA 499
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 328/615 (53%), Gaps = 22/615 (3%)
Query: 6 RVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSG 65
RVF+ +PE N VSW+A++ G ++ + F M+ + S+ ++VL+ A
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 66 YIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIIT 125
++ G +HA A++ A D + + +DMY+KC +A +F ++ + ++ A+IT
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 126 CLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFES 185
Q+ +A +F+ + S + ++ L+ + RA G I+ + K
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 186 DTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML 245
D V NA + MY + ++ RVF+ + +D+VSWNA+ + + + L +F ML
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 246 LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLE 305
+P+ TF ILKAC+ S +G+G ++H+ +K + N VG SL+DMY K G +E
Sbjct: 476 RSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 306 DAGV----------------AFDSLANKDL----FAYTAIITSYAQAGEAEMALKCFRKM 345
+A + + NK L ++ +II+ Y ++E A F +M
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 346 RLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSI 405
GI ++FT A+ L+ C+ +A+ G+ +H+ +K D+++ + LV MY+KCG +
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 406 DDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSAC 465
D+ +F+ S RD +WN MI GY HG GE+A++ F M+ E P+ +TF+ +L AC
Sbjct: 655 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Query: 466 SHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALV 525
+HMGLI++G ++F +K+ YG+ P + H++ M+DILG++GK I E + ++
Sbjct: 715 AHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI 774
Query: 526 WENLLGACSWH-GNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLS 584
W LLG C+ H N+E+ E+ LL L+P+ S Y S++ A G W S +R +
Sbjct: 775 WRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMR 834
Query: 585 SQGIKKEPSCSWIEV 599
+KKEP CSW+E+
Sbjct: 835 GFKLKKEPGCSWVEL 849
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 276/585 (47%), Gaps = 32/585 (5%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A F MP +VVSWN++L+GY ++G+ K + +F M +F + + +LK +
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G +H + +R+GC D + +L+DMY+K +L+VF I + + V+W AI
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I Q A K F M++ + +Q + S++R+ + R G +HA K F
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+D +V A + MY + + +F+ + + S+NA+ + + E + L +F++
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
++ G + + + +AC+ + + G Q++ IK SL + V + +DMY K
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
L +A FD + +D ++ AII ++ Q G+ L F M I+ +EFT S L
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 364 CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAV----FKGSALRD 419
C+ +L G +HS VK+G + V +L+ MY+KCG I++AE + F+ + +
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 420 T----------------ASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLS 463
T SWN +I GYV E A F M++ G PD+ T+ VL
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 464 ACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPN 522
C+++ GK+ H IKK + + + ++D+ + G + + E L +
Sbjct: 612 TCANLASAGLGKQIHAQVIKK--ELQSDVYICSTLVDMYSKCGDLHD-SRLMFEKSLRRD 668
Query: 523 ALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDIS 567
+ W ++ + HG E+ ++L +M + P+ ++
Sbjct: 669 FVTWNAMICGYAHHGK-------GEEAIQLFERMILENIKPNHVT 706
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 219/451 (48%), Gaps = 25/451 (5%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M+ A+ +F + LN S+NA++ GY++ G K + LF + F + SLS V +
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A + G ++ +AI+ +LD ++ + +DMY KC A +VF ++ D V+W
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
AII +Q G E +F M S ++P++F S+++A T G G IH+ I K
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK 510
Query: 181 YGFESDTLVGNALVSMYMENGRVSYG----SRVFEAI----------------AHQDSVS 220
G S++ VG +L+ MY + G + SR F+ + VS
Sbjct: 511 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 221 WNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTI 280
WN++ S + E + +F +M+ G P+ T+ +L C++L+ G GKQ+HA I
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 281 KHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALK 340
K L + + ++LVDMY K G L D+ + F+ +D + A+I YA G+ E A++
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQ 690
Query: 341 CFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVS--TALVAM 398
F +M LE IK N T S L C+ + + G L + +K + LD + + +V +
Sbjct: 691 LFERMILENIKPNHVTFISILRACAHMGLIDKG-LEYFYMMKRDYGLDPQLPHYSNMVDI 749
Query: 399 YAKCGSIDDAEAVFKGSALR-DTASWNMMIG 428
K G + A + + D W ++G
Sbjct: 750 LGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 230/463 (49%), Gaps = 8/463 (1%)
Query: 50 SKFSLSTVLKGFANS-GYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKV 108
+ F L+ +L+ + NS ++ A V M +R + +K +++ YSK A
Sbjct: 82 TTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK-----MINGYSKSNDMFKANSF 136
Query: 109 FYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQ 168
F + DVV+W ++++ Q G ++ ++F M ++ + +++ + D
Sbjct: 137 FNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 196
Query: 169 RCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRF 228
G IH ++ + G ++D + +AL+ MY + R RVF+ I ++SVSW+A+ +
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 256
Query: 229 QDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNH 288
L+ F +M + + +L++C++LS++ G QLHAH +K +
Sbjct: 257 VQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 289 VVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE 348
+V T+ +DMY K ++DA + FD+ N + +Y A+IT Y+Q AL F ++
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 349 GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDA 408
G+ +E +L+ C+ V L+ G ++ +A+K+ LD+ V+ A + MY KC ++ +A
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 409 EAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
VF RD SWN +I + ++G G + L F ML PDE TF +L AC+
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG- 495
Query: 469 GLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIE 511
G + G + SSI K G+ +ID+ + G E E
Sbjct: 496 GSLGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAE 537
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 37/407 (9%)
Query: 164 ETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNA 223
+ G G+ HA + GF T V N L+ +Y + S VF+ + +D VSWN
Sbjct: 60 KQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK 119
Query: 224 LFSRF--------------------------------QDYESPDQGLRIFYQMLLKGFKP 251
+ + + Q+ ES + + +F M +G +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL-KSIEVFVDMGREGIEF 178
Query: 252 NMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAF 311
+ TF +ILK CS L D G Q+H ++ D + V ++L+DMY K ++ F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 312 DSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLA 371
+ K+ +++AII Q +ALK F++M+ ++ AS L C+ ++ L
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 372 NGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYV 431
G LH+ A+K+ D V TA + MYAKC ++ DA+ +F S + S+N MI GY
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 432 KHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFS-SIKKIYGITPT 490
+ G KAL F ++ G DEI+ V AC+ + + EG + + +IK +
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 491 IKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
+ + A ID+ G+ E E + +A+ W ++ A +G
Sbjct: 419 VANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 255 TFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSL 314
F + K C+ + GKQ HAH I V L+ +Y S A + FD +
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 315 -----------------------AN--------KDLFAYTAIITSYAQAGEAEMALKCFR 343
AN +D+ ++ ++++ Y Q GE+ +++ F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 344 KMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCG 403
M EGI+ + T A L CS + + G +H I V+ G D+ ++AL+ MYAK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 404 SIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLS 463
++ VF+G +++ SW+ +I G V++ L AL+ F+ M + + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 464 ACSHMGLIEEGKK-HFSSIKKIYGITPTIK 492
+C+ + + G + H ++K + ++
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVR 319
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 289/564 (51%), Gaps = 35/564 (6%)
Query: 73 VHAMAIRLGCALDKFLSCSLVDMYSKCGLA--DNALKVFYRIKDPDVVAWGAIITCLDQ- 129
H IR G D + + L M + A + A KVF I P+ AW +I
Sbjct: 49 THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASG 108
Query: 130 QGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLV 189
+++ ES PN++ L++A E G+S+H + K SD V
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168
Query: 190 GNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGF 249
N+L+ Y G + +VF I +D VSWN++ + F SPD+ L +F +M +
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 250 KPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGV 309
K + T + +L AC+ + ++ FG+Q+ ++ ++ ++ N + +++DMY K G +EDA
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 310 AFD-------------------------------SLANKDLFAYTAIITSYAQAGEAEMA 338
FD S+ KD+ A+ A+I++Y Q G+ A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 339 LKCFRKMRLE-GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVA 397
L F +++L+ +K N+ TL S L+ C+ V L GR +HS K G ++ V++AL+
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 398 MYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEIT 457
MY+KCG ++ + VF RD W+ MIGG HG G +A++ F M + P+ +T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 458 FVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITET 517
F V ACSH GL++E + F ++ YGI P KH+AC++D+LGR+G + FI
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 518 KLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFS 577
+ P+ VW LLGAC H N+ L E +LLELEP+ + +V S+I A G+W + S
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS 588
Query: 578 GVRALLSSQGIKKEPSCSWIEVDG 601
+R + G+KKEP CS IE+DG
Sbjct: 589 ELRKHMRVTGLKKEPGCSSIEIDG 612
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 215/469 (45%), Gaps = 35/469 (7%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKF-SKFSLSTVLK 59
+E A++VF +P+ N +WN L+ YA D + F M + + +K++ ++K
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
A + GQ +H MA++ D F++ SL+ Y CG D+A KVF IK+ DVV+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W ++I Q+G +A ++F M VK + + ++ A + + G + + I
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVS------------------- 220
+ + + NA++ MY + G + R+F+A+ +D+V+
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 221 ------------WNALFSRFQDYESPDQGLRIFYQM-LLKGFKPNMCTFIVILKACSSLS 267
WNAL S ++ P++ L +F+++ L K K N T + L AC+ +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 268 DVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIIT 327
+ G+ +H++ KH + N V ++L+ MY K G LE + F+S+ +D+F ++A+I
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 328 SYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGR-LLHSIAVKTGHL 386
A G A+ F KM+ +K N T + CS + L H + G +
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 387 LDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS-WNMMIGGYVKHG 434
+ +V + + G ++ A + + + S W ++G H
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 310/598 (51%), Gaps = 6/598 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A+ VF +PE + W +L Y + + +V+ L+ + ++ S LK
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
+ G+ +H +++ + D + L+DMY+KCG +A KVF I +VV W ++
Sbjct: 155 LQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I + C+E +FN MRE++V N++ +L+ A T+ G+ H + K G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
E + + +L+ MY++ G +S RVF +H D V W A+ + S ++ L +F +
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSL-DGNHVVGTSLVDMYDKSG 302
M KPN T +L C + ++ G+ +H +IK + D N V +LV MY K
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCY 391
Query: 303 CLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLN 362
DA F+ + KD+ A+ +II+ ++Q G AL F +M E + N T+AS +
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 363 GCSPVATLANGRLLHSIAVKTGHLLD--MFVSTALVAMYAKCGSIDDAEAVFKGSALRDT 420
C+ + +LA G LH+ +VK G L + V TAL+ YAKCG A +F ++T
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 421 ASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSS 480
+W+ MIGGY K G +LE F ML + P+E TF +LSAC H G++ EGKK+FSS
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 481 IKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIE 540
+ K Y TP+ KH+ CM+D+L RAG+ + + I + + P+ + L C H +
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD 631
Query: 541 LDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
L E +K+L+L P S YV S++ A+ GRWN VR L+ +G+ K S +E
Sbjct: 632 LGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 187/396 (47%), Gaps = 15/396 (3%)
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESP 234
H V+ G D + LVS+Y G VF+ I D W + + +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 235 DQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIK-HSLDGNHVVGTS 293
+ ++++ ++ GF+ + F LKAC+ L D+ GK++H +K S D +VV T
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD--NVVLTG 181
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSN 353
L+DMY K G ++ A F+ + +++ +T++I Y + E L F +MR + N
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
E+T + + C+ ++ L G+ H VK+G L + T+L+ MY KCG I +A VF
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 414 GSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEE 473
+ D W MI GY +G +AL F+ M P+ +T VLS C + +E
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 474 GKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGA 532
G+ H SIK GI T A ++ + + + + + ++ E + + + W +++
Sbjct: 362 GRSVHGLSIK--VGIWDTNVANA-LVHMYAKCYQNRDAK-YVFEMESEKDIVAWNSIISG 417
Query: 533 CSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISA 568
S +G+I + L L +M S V P+ ++
Sbjct: 418 FSQNGSI-------HEALFLFHRMNSESVTPNGVTV 446
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 258 VILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANK 317
++L C+++ + +Q H + L G+ + T LV +Y G +DA + FD +
Sbjct: 49 LLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 318 DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLH 377
D + + ++ Y E+ +K + + G + ++ + L C+ + L NG+ +H
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 378 SIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGE 437
VK D V T L+ MYAKCG I A VF LR+ W MI GYVK+ L E
Sbjct: 166 CQLVKVPS-FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 438 KALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGK 475
+ L F M + + +E T+ ++ AC+ + + +GK
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 309/598 (51%), Gaps = 4/598 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A +F MPE N VS+ L GYA Q + L+ + + + ++ LK F +
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
+ +H+ ++LG + F+ +L++ YS CG D+A VF I D+V W I
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
++C + G +++ K+ + MR + PN + + ++A+ G + +H I K +
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
D VG L+ +Y + G +S +VF + D V W+ + +RF ++ + +F +
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M PN T IL C+ G G+QLH +K D + V +L+D+Y K
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
++ A F L++K+ ++ +I Y GE A FR+ + E T +S L
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGA 458
Query: 364 CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASW 423
C+ +A++ G +H +A+KT + + VS +L+ MYAKCG I A++VF D ASW
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 424 NMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKK 483
N +I GY HGLG +AL +M D P+ +TF+ VLS CS+ GLI++G++ F S+ +
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 484 IYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDE 543
+GI P ++H+ CM+ +LGR+G+ + I P+ ++W +L A N E
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Query: 544 KDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
+ AE++L++ PK E+ YV S++ A +W + + +R + G+KKEP SWIE G
Sbjct: 639 RSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 221/473 (46%), Gaps = 14/473 (2%)
Query: 69 AGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLD 128
+ + +H ++ G LD F + L++ Y K G +AL +F + + + V++ L
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSF----VTLA 122
Query: 129 QQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTL 188
Q CQ+ +++ + + N V TS ++ +H+ I K G++S+
Sbjct: 123 QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 189 VGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKG 248
VG AL++ Y G V VFE I +D V W + S + + + L++ M + G
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 249 FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAG 308
F PN TF LKA L F K +H +K + VG L+ +Y + G + DA
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 309 VAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVA 368
F+ + D+ ++ +I + Q G A+ F +MR + NEFTL+S LNGC+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 369 TLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIG 428
G LH + VK G LD++VS AL+ +YAKC +D A +F + ++ SWN +I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 429 GYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEG-KKHFSSIKKIYGI 487
GY G G KA FR L E+TF L AC+ + ++ G + H +IK
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK----- 477
Query: 488 TPTIKHFAC---MIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
T K A +ID+ + G ++ E + T + W L+ S HG
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG 529
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 19/230 (8%)
Query: 347 LEGIKSNEF--TLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGS 404
+ G+ S+ + L C+ P++ A +H +K G LD+F + L+ Y K G
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKA----IHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 405 IDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSA 464
DA +F R+ S+ + GY + + + + EG+ + F L
Sbjct: 100 DKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 465 CSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNAL 524
+ E S I K+ G A +I+ G + E L + +
Sbjct: 156 FVSLDKAEICPWLHSPIVKL-GYDSNAFVGAALINAYSVCGSVDSART-VFEGILCKDIV 213
Query: 525 VWENLLGACSWHGNIELDEKDAEKLL---ELEPKMESNYVFPSDISATQG 571
VW ++ +G E D+ KLL + M +NY F + + A+ G
Sbjct: 214 VWAGIVSCYVENGYFE----DSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 278/542 (51%), Gaps = 31/542 (5%)
Query: 91 SLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFN-LMRESSVK 149
+L+ YSK GL F ++ D D V W +I G A K +N +MR+ S
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 150 PNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRV 209
+ L ++++ ++ G G+ IH + K GFES LVG+ L+ MY G +S +V
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 210 FEAI------------------------------AHQDSVSWNALFSRFQDYESPDQGLR 239
F + +DSVSW A+ + +
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
F +M ++G K + F +L AC L + GKQ+HA I+ + + VG++L+DMY
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLAS 359
K CL A FD + K++ ++TA++ Y Q G AE A+K F M+ GI + +TL
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 360 CLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRD 419
++ C+ V++L G H A+ +G + + VS +LV +Y KCG IDD+ +F +RD
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 420 TASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFS 479
SW M+ Y + G + ++ F M+ G PD +T V+SACS GL+E+G+++F
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 480 SIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNI 539
+ YGI P+I H++CMID+ R+G+ E FI P+A+ W LL AC GN+
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 540 ELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
E+ + AE L+EL+P + Y S I A++G+W+ + +R + + +KKEP SWI+
Sbjct: 557 EIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKW 616
Query: 600 DG 601
G
Sbjct: 617 KG 618
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 225/501 (44%), Gaps = 66/501 (13%)
Query: 7 VFKSMPELNVVSWNALLNGYAESG-DGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSG 65
F+ +P+ + V+WN L+ GY+ SG G V M+D ++ +L T+LK +++G
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 66 YIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKD----------- 114
++ G+ +H I+LG + L+ MY+ G +A KVFY + D
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 115 -------------------PDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVL 155
D V+W A+I L Q G +EA + F M+ +K +Q+
Sbjct: 214 GLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 156 TSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAH 215
S++ A G G+ IHA I + F+ VG+AL+ MY + + Y VF+ +
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 216 QDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQL 275
++ VSW A+ + ++ ++IF M G P+ T + AC+++S + G Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 276 HAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEA 335
H I L V SLV +Y K G ++D+ F+ + +D ++TA++++YAQ G A
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 336 EMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANG-RLLHSIAVKTGHLLDMFVSTA 394
++ F KM G+K + TL ++ CS + G R + + G + + +
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 395 LVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPD 454
++ ++++ G ++ EA R + + PD
Sbjct: 514 MIDLFSRSGRLE----------------------------------EAMRFINGMPFPPD 539
Query: 455 EITFVVVLSACSHMGLIEEGK 475
I + +LSAC + G +E GK
Sbjct: 540 AIGWTTLLSACRNKGNLEIGK 560
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+ AK VF M + NVVSW A++ GY ++G ++ + +F M+ ++L +
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
AN ++ G H AI G +S SLV +Y KCG D++ ++F + D V+W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC- 179
A+++ Q G E ++F+ M + +KP+ LT ++ A + G G+ ++
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAH-QDSVSWNALFS 226
+YG + ++ ++ +GR+ R + D++ W L S
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 388 DMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFR-MM 446
++F L+ Y+K G I + E+ F+ RD +WN++I GY GL A++A+ MM
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 447 LDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKI 484
D +T + +L S G + GK+ + K+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 318/606 (52%), Gaps = 9/606 (1%)
Query: 1 MELAKRVFKSMP--ELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVL 58
+ELA+ VF +P +N ++W+ ++ YA + +K + L+ M + + +K++ VL
Sbjct: 51 VELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVL 110
Query: 59 KGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
K A I G+++H+ A D ++ +LVD Y+KCG + A+KVF + D+V
Sbjct: 111 KACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 119 AWGAIITCLDQQGCCQEAAKIF-NLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAV 177
AW A+I+ C + +F ++ R + PN + + A G R G+++H
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY 230
Query: 178 ICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQG 237
+ GF +D +V ++ +Y ++ + Y RVF+ ++ V+W+A+ + + E +
Sbjct: 231 CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 238 LRIFYQMLLKGFKPNMCTFI---VILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSL 294
+F+QML+ M T + +IL C+ D+ G+ +H + +K + V ++
Sbjct: 291 GEVFFQMLVND-NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTI 349
Query: 295 VDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
+ Y K G L DA F + KD+ +Y ++IT E + + F +MR GI+ +
Sbjct: 350 ISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDI 409
Query: 355 FTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG 414
TL L CS +A L +G H V G+ ++ + AL+ MY KCG +D A+ VF
Sbjct: 410 TTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT 469
Query: 415 SALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEG 474
RD SWN M+ G+ HGLG++AL F M + G PDE+T + +LSACSH GL++EG
Sbjct: 470 MHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEG 529
Query: 475 KKHFSSIKK-IYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGAC 533
K+ F+S+ + + + P I H+ CM D+L RAG E +F+ + P+ V LL AC
Sbjct: 530 KQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Query: 534 SWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPS 593
+ N EL + ++K+ L ES + + SA + RW D + +R + +G+ K P
Sbjct: 590 WTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSAAE-RWEDAARIRMIQKKRGLLKTPG 648
Query: 594 CSWIEV 599
SW++V
Sbjct: 649 YSWVDV 654
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/610 (32%), Positives = 321/610 (52%), Gaps = 18/610 (2%)
Query: 6 RVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSG 65
+VF + E N VSWN+L++ + + F M D + S F+L +V+ +N
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 66 Y---IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
+ G+ VHA +R G L+ F+ +LV MY K G ++ + D+V W
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+++ L Q EA + M V+P++F ++S++ A + R G+ +HA K G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 183 -FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
+ ++ VG+ALV MY +V G RVF+ + + WNA+ + + E + L +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 242 YQMLLK-GFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
M G N T ++ AC + +H +K LD + V +L+DMY +
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMR-LE----------G 349
G ++ A F + ++DL + +IT Y + E AL KM+ LE
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 350 IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAE 409
+K N TL + L C+ ++ LA G+ +H+ A+K D+ V +ALV MYAKCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 410 AVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMG 469
VF ++ +WN++I Y HG G++A++ RMM+ +G P+E+TF+ V +ACSH G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 470 LIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPN-ALVWEN 528
+++EG + F +K YG+ P+ H+AC++D+LGRAG+ E + N A W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 529 LLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGI 588
LLGA H N+E+ E A+ L++LEP + S+YV ++I ++ G W+ + VR + QG+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 589 KKEPSCSWIE 598
+KEP CSWIE
Sbjct: 753 RKEPGCSWIE 762
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 256/538 (47%), Gaps = 22/538 (4%)
Query: 19 WNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHAMAI 78
W LL S ++ + + M + K ++ +LK A+ ++ G+ +HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 79 RLGCALDKF-LSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAA 137
+ G +D ++ +LV++Y KCG KVF RI + + V+W ++I+ L + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 138 KIFNLMRESSVKPNQFVLTSLVRATTETGDQR---CGESIHAVICKYGFESDTLVGNALV 194
+ F M + +V+P+ F L S+V A + G+ +HA + G E ++ + N LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 195 SMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMC 254
+MY + G+++ + + +D V+WN + S E + L +M+L+G +P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 255 TFIVILKACSSLSDVGFGKQLHAHTIKH-SLDGNHVVGTSLVDMYDKSGCLEDAGVAFDS 313
T +L ACS L + GK+LHA+ +K+ SLD N VG++LVDMY + FD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 314 LANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE-GIKSNEFTLASCLNGCSPVATLAN 372
+ ++ + + A+I Y+Q + AL F M G+ +N T+A + C +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 373 GRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVK 432
+H VK G D FV L+ MY++ G ID A +F RD +WN MI GYV
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 433 HGLGEKALEAFRMMLD-EGYV----------PDEITFVVVLSACSHMGLIEEGKK-HFSS 480
E AL M + E V P+ IT + +L +C+ + + +GK+ H +
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 481 IKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
IK + + + ++D+ + G ++ + + N + W ++ A HGN
Sbjct: 544 IKN--NLATDVAVGSALVDMYAKCGCL-QMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 5 KRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSK-FSLSTVLKGFAN 63
+RVF M + + WNA++ GY+++ ++ + LF M++ + +++ V+
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
SG + +H ++ G D+F+ +L+DMYS+ G D A+++F +++D D+V W +
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 124 ITCLDQQGCCQEAA----KIFNLMRE-------SSVKPNQFVLTSLVRATTETGDQRCGE 172
IT ++A K+ NL R+ S+KPN L +++ + G+
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 173 SIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYE 232
IHA K +D VG+ALV MY + G + +VF+ I ++ ++WN + + +
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 233 SPDQGLRIFYQMLLKGFKPNMCTFIVILKACS 264
+ + + + M+++G KPN TFI + ACS
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 16/274 (5%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSK--------- 51
+++A R+F M + ++V+WN ++ GY S + + L M+++E+K SK
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 52 --FSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF 109
+L T+L A + G+ +HA AI+ A D + +LVDMY+KCG + KVF
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 110 YRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQR 169
+I +V+ W II G QEA + +M VKPN+ S+ A + +G
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 170 CGESIHAVI-CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAH--QDSVSWNALFS 226
G I V+ YG E + +V + GR+ ++ + + +W++L
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 227 RFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVIL 260
+ + + + G I Q L++ +PN+ + V+L
Sbjct: 696 ASRIHNNLEIG-EIAAQNLIQ-LEPNVASHYVLL 727
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 314/599 (52%), Gaps = 3/599 (0%)
Query: 4 AKRVFKSMPEL-NVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
A RVF + + NVV WN ++ G+ SG + + L+ K+ K S + L +
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
S G+ +H +++G D ++ SL+ MYSKCG+ A VF + D + W A
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
++ + A +F MR+ SV P+ F L++++ + G G+S+HA + K
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
+S + + +AL+++Y + G VF+++ +D V+W +L S + L++F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 243 QMLLK--GFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
M KP+ + AC+ L + FG Q+H IK L N VG+SL+D+Y K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G E A F S++ +++ A+ ++I+ Y++ E+++ F M +GI + ++ S
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 361 LNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDT 420
L S A+L G+ LH ++ G D + AL+ MY KCG AE +FK +
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 421 ASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSS 480
+WN+MI GY HG AL F M G PD++TF+ ++SAC+H G +EEGK F
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 481 IKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIE 540
+K+ YGI P ++H+A M+D+LGRAG E +FI + ++ +W LL A H N+E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 541 LDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
L AEKLL +EP+ S YV ++ G N+ + + L+ +G+ K+P CSWIEV
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 263/567 (46%), Gaps = 26/567 (4%)
Query: 18 SWNALLNGYAESGDGQKVMHLFCSMKDMEKKF--SKFSLSTVLKGFANSGYIKAGQVVHA 75
S N+ + + G+ + +HL+ S D F S F+ ++LK + + G+ +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLY-SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 76 MAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF-------YRIKDPDVVAWGAIITCLD 128
+ LG D F++ SLV+MY KCG D A++VF + DV W ++I
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 129 QQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRC--GESIHAVICKYGFESD 186
+ +E F M V+P+ F L+ +V + G+ R G+ IH + + ++D
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD 204
Query: 187 TLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVS-WNALFSRFQDYESPDQGLRIFYQML 245
+ + AL+ MY + G RVF I + +V WN + F + L ++
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 246 LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLE 305
K +F L ACS + GFG+Q+H +K L + V TSL+ MY K G +
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 306 DAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCS 365
+A F + +K L + A++ +YA+ AL F MR + + + FTL++ ++ CS
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 366 PVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNM 425
+ G+ +H+ K + +AL+ +Y+KCG DA VFK +D +W
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 426 MIGGYVKHGLGEKALEAFRMML--DEGYVPDEITFVVVLSACSHMGLIEEG-KKHFSSIK 482
+I G K+G ++AL+ F M D+ PD V +AC+ + + G + H S IK
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
G+ + + +ID+ + G E+ + + T N + W +++ +C N+
Sbjct: 505 T--GLVLNVFVGSSLIDLYSKCG-LPEMALKVFTSMSTENMVAWNSMI-SCYSRNNL--- 557
Query: 543 EKDAEKLLELEPKMESNYVFPSDISAT 569
E ++L M S +FP +S T
Sbjct: 558 ---PELSIDLFNLMLSQGIFPDSVSIT 581
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 2/239 (0%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGF 61
E+A +VF SM N+V+WN++++ Y+ + + + LF M S+++VL
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 62 ANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWG 121
+++ + G+ +H +RLG D L +L+DMY KCG + A +F +++ ++ W
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 122 AIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK- 180
+I G C A +F+ M+++ P+ SL+ A +G G++I + +
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIA-HQDSVSWNALFSRFQDYESPDQGL 238
YG E + +V + G + +A+ DS W L S + + + + G+
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 328 bits (840), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 316/600 (52%), Gaps = 3/600 (0%)
Query: 4 AKRVFKSMPEL-NVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
A+R+F E + V WN++L+ Y+ SG + + LF M + +++ + L
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSC-SLVDMYSKCGLADNALKVFYRIKDPDVVAWG 121
Y K G+ +HA ++ + C +L+ MY++CG A ++ ++ + DVV W
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 122 AIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKY 181
++I Q +EA + F+ M + K ++ +TS++ A+ + G +HA + K+
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 182 GFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
G++S+ VGN L+ MY + Y R F + +D +SW + + + + + L +F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKS 301
+ K + + IL+A S L + K++H H ++ L + V+ LVD+Y K
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKC 534
Query: 302 GCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
+ A F+S+ KD+ ++T++I+S A G A++ FR+M G+ ++ L L
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 362 NGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTA 421
+ + ++ L GR +H ++ G L+ ++ A+V MYA CG + A+AVF +
Sbjct: 595 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 654
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSI 481
+ MI Y HG G+ A+E F M E PD I+F+ +L ACSH GL++EG+ +
Sbjct: 655 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 482 KKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIEL 541
+ Y + P +H+ C++D+LGRA E F+ K P A VW LL AC H E+
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 774
Query: 542 DEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
E A++LLELEPK N V S++ A QGRWND VRA + + G++K P CSWIE+DG
Sbjct: 775 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 834
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 267/572 (46%), Gaps = 24/572 (4%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A++VF MP+ +WN ++ Y +G+ + L+ +M+ S +LK A
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK 194
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDP-DVVAWGA 122
I++G +H++ ++LG F+ +LV MY+K A ++F ++ D V W +
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
I++ G E ++F M + PN + + S + A + G+ IHA + K
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 183 FESDTL-VGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
S L V NAL++MY G++ R+ + + D V+WN+L + + L F
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKS 301
M+ G K + + I+ A LS++ G +LHA+ IKH D N VG +L+DMY K
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 302 GCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
G AF + +KDL ++T +I YAQ AL+ FR + + ++ +E L S L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 362 NGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTA 421
S + ++ + +H ++ G LLD + LV +Y KC ++ A VF+ +D
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 553
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK-HFSS 480
SW MI +G +A+E FR M++ G D + + +LSA + + + +G++ H
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 481 IKKIYGITPTI-----KHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSW 535
++K + + +I +AC D+ F IE L + +++ A
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER--------KGLLQYTSMINAYGM 665
Query: 536 HGNIELDEKDAEKLLELEPKMESNYVFPSDIS 567
HG + +EL KM V P IS
Sbjct: 666 HGC-------GKAAVELFDKMRHENVSPDHIS 690
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 212/457 (46%), Gaps = 11/457 (2%)
Query: 87 FLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRES 146
FL+ LV MY KCG D+A KVF + D AW +I G A ++ MR
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 147 SVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYG 206
V +L++A + D R G +H+++ K G+ S + NALVSMY +N +S
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 207 SRVFEAIAHQ-DSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSS 265
R+F+ + D+V WN++ S + + L +F +M + G PN T + L AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 266 LSDVGFGKQLHAHTIKHSLDGNHV-VGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTA 324
S GK++HA +K S + + V +L+ MY + G + A + N D+ + +
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 325 IITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTG 384
+I Y Q + AL+ F M G KS+E ++ S + ++ L G LH+ +K G
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 385 HLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFR 444
++ V L+ MY+KC F +D SW +I GY ++ +ALE FR
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 445 MMLDEGYVPDEITFVVVLSACS---HMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDIL 501
+ + DE+ +L A S M +++E H ++K G+ T+ ++D+
Sbjct: 477 DVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI--LRK--GLLDTVIQNE-LVDVY 531
Query: 502 GRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
G+ K + + W +++ + + +GN
Sbjct: 532 GKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 567
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 153/336 (45%), Gaps = 17/336 (5%)
Query: 208 RVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFK--------PNMCTFIVI 259
R+ +I + S N Q + P L F +L + F+ + F +
Sbjct: 27 RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYV 86
Query: 260 LKACSSLSDVGFGKQLHAHTIK--HSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANK 317
L+ C V G+QLH+ K S + + + G LV MY K G L+DA FD + ++
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 318 DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLH 377
FA+ +I +Y GE AL + MR+EG+ + + L C+ + + +G LH
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 378 SIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR-DTASWNMMIGGYVKHGLG 436
S+ VK G+ F+ ALV+MYAK + A +F G + D WN ++ Y G
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 437 EKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFAC 496
+ LE FR M G P+ T V L+AC + GK+ +S+ K T + + + C
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK--SSTHSSELYVC 323
Query: 497 --MIDILGRAGKFTEIENFITETKLTPNALVWENLL 530
+I + R GK + E + + + + W +L+
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 325/601 (54%), Gaps = 10/601 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A++VF MP ++V+W+ L++ E+G+ K + +F M D + ++ +V++G A
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G ++ + VH R LD+ L SL+ MYSKCG ++ ++F +I + V+W A+
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAM 274
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKY-- 181
I+ ++ ++A + F+ M +S ++PN L S++ + G R G+S+H +
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 182 --GFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
+ES +L ALV +Y E G++S V ++ ++ V+WN+L S + Q L
Sbjct: 335 DPNYESLSL---ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
+F QM+ + KP+ T + AC + V GKQ+H H I+ + + V SL+DMY
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYS 450
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLAS 359
KSG ++ A F+ + ++ + + +++ ++Q G + A+ F M ++ NE T +
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA 510
Query: 360 CLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRD 419
+ CS + +L G+ +H + +G L D+F TAL+ MYAKCG ++ AE VF+ + R
Sbjct: 511 VIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569
Query: 420 TASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFS 479
SW+ MI Y HG A+ F M++ G P+E+ F+ VLSAC H G +EEGK +F+
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 629
Query: 480 SIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNI 539
+K +G++P +HFAC ID+L R+G E I E +A VW +L+ C H +
Sbjct: 630 LMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688
Query: 540 ELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
++ + L ++ Y S+I A +G W +F +R+ + S +KK P S IE+
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Query: 600 D 600
D
Sbjct: 749 D 749
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 281/571 (49%), Gaps = 35/571 (6%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
++ VF++ P + + L+ + L+ + + SKF +VL+ A
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 64 SG-YIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
S ++ G VH I+ G D + SL+ MY + G +A KVF + D+VAW
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+++ + G +A ++F M + V+P+ + S+V E G R S+H I +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
F+ D + N+L++MY + G + R+FE IA +++VSW A+ S + E ++ LR F
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 243 QMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNH-VVGTSLVDMYDKS 301
+M+ G +PN+ T +L +C + + GK +H ++ LD N+ + +LV++Y +
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAEC 352
Query: 302 GCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
G L D ++++++ A+ ++I+ YA G AL FR+M + IK + FTLAS +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 362 NGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTA 421
+ C + G+ +H ++T + D FV +L+ MY+K GS+D A VF R
Sbjct: 413 SACENAGLVPLGKQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGK--KH-- 477
+WN M+ G+ ++G +A+ F M +E+TF+ V+ ACS +G +E+GK H
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531
Query: 478 -FSSIKKIYGITPTIKHFA------------------------CMID---ILGRAGKFTE 509
S +K ++ T I +A MI+ + GR G
Sbjct: 532 IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIS 591
Query: 510 IENFITETKLTPNALVWENLLGACSWHGNIE 540
N + E+ PN +V+ N+L AC G++E
Sbjct: 592 TFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 223/460 (48%), Gaps = 13/460 (2%)
Query: 85 DKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMR 144
D L++ Y+ G D++ VF PD +G +I C A +++ +
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 145 ESSVKPNQFVLTSLVRATTETGDQ-RCGESIHAVICKYGFESDTLVGNALVSMYMENGRV 203
+ + ++FV S++RA + + G +H I K G + D ++ +L+ MY + G +
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 204 SYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKAC 263
S +VF+ + +D V+W+ L S + + LR+F M+ G +P+ T I +++ C
Sbjct: 153 SDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGC 212
Query: 264 SSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYT 323
+ L + + +H + D + + SL+ MY K G L + F+ +A K+ ++T
Sbjct: 213 AELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT 272
Query: 324 AIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKT 383
A+I+SY + +E AL+ F +M GI+ N TL S L+ C + + G+ +H AV+
Sbjct: 273 AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 384 GHLLDM---FVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKAL 440
LD +S ALV +YA+CG + D E V + + R+ +WN +I Y G+ +AL
Sbjct: 333 E--LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 441 EAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFA--CMI 498
FR M+ + PD T +SAC + GL+ GK+ + + T F +I
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR----TDVSDEFVQNSLI 446
Query: 499 DILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
D+ ++G + K + + W ++L S +GN
Sbjct: 447 DMYSKSGSVDSASTVFNQIK-HRSVVTWNSMLCGFSQNGN 485
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 7/375 (1%)
Query: 169 RCGESIHAVICKYG-FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSR 227
R +HA + G D L L+ Y G VFEA + DS + L
Sbjct: 15 RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC 74
Query: 228 FQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACS-SLSDVGFGKQLHAHTIKHSLDG 286
D + ++++++ + + + F +L+AC+ S + G ++H IK +D
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 287 NHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMR 346
+ V+ TSL+ MY ++G L DA FD + +DL A++ +++S + GE AL+ F+ M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 347 LEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSID 406
+G++ + T+ S + GC+ + L R +H + LD + +L+ MY+KCG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 407 DAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACS 466
+E +F+ A ++ SW MI Y + EKAL +F M+ G P+ +T VLS+C
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 467 HMGLIEEGKK-HFSSIKKIYGITPTIKHFA-CMIDILGRAGKFTEIENFITETKLTPNAL 524
+GLI EGK H ++++ + P + + ++++ GK ++ E + N +
Sbjct: 315 LIGLIREGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIV 371
Query: 525 VWENLLGACSWHGNI 539
W +L+ + G +
Sbjct: 372 AWNSLISLYAHRGMV 386
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 325/612 (53%), Gaps = 17/612 (2%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGF 61
++ ++VF +M NVV+WN L++ Y ++G + F M ME K S S V
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 62 ANSGYIKAGQVVHAMAIRLG--CALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
+ S IK V + + ++LG D F+ S + MY++ G +++ +VF + ++
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFV---LTSLVRATTETGDQRC--GESI 174
W +I Q C E+ ++F ++ + V +T L+ A+ + Q+ G
Sbjct: 285 WNTMIGVYVQNDCLVESIELF----LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQF 340
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESP 234
H + K E ++ N+L+ MY G V VF ++ +D VSWN + S F
Sbjct: 341 HGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLD 400
Query: 235 DQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSL 294
D+GL + Y+M +GFK + T +L A S+L + GKQ HA I+ + + + L
Sbjct: 401 DEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYL 459
Query: 295 VDMYDKSGCLEDAGVAFDS--LANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKS 352
+DMY KSG + + F+ A +D + ++I+ Y Q G E FRKM + I+
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 353 NEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVF 412
N T+AS L CS + ++ G+ LH +++ ++FV++ALV MY+K G+I AE +F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 413 KGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIE 472
+ R++ ++ MI GY +HG+GE+A+ F M + G PD ITFV VLSACS+ GLI+
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 473 EGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPN-ALVWENLLG 531
EG K F ++++Y I P+ +H+ C+ D+LGR G+ E F+ N A +W +LLG
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 532 ACSWHGNIELDEKDAEKLLELEP-KMESNY-VFPSDISATQGRWNDFSGVRALLSSQGIK 589
+C HG +EL E +E+L + + K S Y V S++ A + +W VR + +G+K
Sbjct: 700 SCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLK 759
Query: 590 KEPSCSWIEVDG 601
KE S IE+ G
Sbjct: 760 KEVGRSGIEIAG 771
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/625 (24%), Positives = 296/625 (47%), Gaps = 55/625 (8%)
Query: 2 ELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEK--KFSKFSLSTVLK 59
+LA+++F ++P+ V WN ++ G+ + + + + MK ++ S+ LK
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLA------DNALKVFYRIK 113
A + +KAG+ VH IR + + SL++MY C A D KVF ++
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 114 DPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGES 173
+VVAW +I+ + G EA + F +M VKP+ ++ A + + +
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 174 IHAVICKYGFE--SDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDY 231
+ ++ K G E D V ++ +SMY E G + RVF++ ++ WN + +
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 232 ESPDQGLRIFYQML-LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVV 290
+ + + +F + + K + T+++ A S+L V G+Q H K+ + V+
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 291 GTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGI 350
SL+ MY + G + + F S+ +D+ ++ +I+++ Q G + L +M+ +G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 351 KSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA 410
K + T+ + L+ S + G+ H+ ++ G + +++ L+ MY+K G I ++
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQK 474
Query: 411 VFKGS--ALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
+F+GS A RD A+WN MI GY ++G EK FR ML++ P+ +T +L ACS +
Sbjct: 475 LFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQI 534
Query: 469 GLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETK--------- 518
G ++ GK+ H SI++ + + + ++D+ +AG E+ ++TK
Sbjct: 535 GSVDLGKQLHGFSIRQY--LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTT 592
Query: 519 -------------------------LTPNALVWENLLGACSWHGNIELDEKDAEKLLE-- 551
+ P+A+ + +L ACS+ G I+ K E++ E
Sbjct: 593 MILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVY 652
Query: 552 -LEPKMESNYVFPSDISATQGRWND 575
++P E +Y +D+ GR N+
Sbjct: 653 NIQPSSE-HYCCITDMLGRVGRVNE 676
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 208/447 (46%), Gaps = 21/447 (4%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E ++RVF S E N+ WN ++ Y ++ + + LF K+ ++ +L
Sbjct: 267 IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG-SKEIVSDEVTYLLAA 325
Query: 61 FANSGY--IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
A S ++ G+ H + L + SL+ MYS+CG + VF +++ DVV
Sbjct: 326 SAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
+W +I+ Q G E + M++ K + +T+L+ A + ++ G+ HA +
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFE--AIAHQDSVSWNALFSRFQDYESPDQ 236
+ G + + + + L+ MY ++G + ++FE A +D +WN++ S + ++
Sbjct: 446 IRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEK 504
Query: 237 GLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVD 296
+F +ML + +PN T IL ACS + V GKQLH +I+ LD N V ++LVD
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVD 564
Query: 297 MYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFT 356
MY K+G ++ A F ++ YT +I Y Q G E A+ F M+ GIK + T
Sbjct: 565 MYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAIT 624
Query: 357 LASCLNGCSPVATLANG-------RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAE 409
+ L+ CS + G R +++I + H + M + G +++A
Sbjct: 625 FVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY------CCITDMLGRVGRVNEAY 678
Query: 410 AVFKGSALRDTAS--WNMMIGGYVKHG 434
KG + W ++G HG
Sbjct: 679 EFVKGLGEEGNIAELWGSLLGSCKLHG 705
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 13/305 (4%)
Query: 199 ENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMC---T 255
++G ++F+AI +V WN + F P + L +FY + K C T
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL-LFYSRMKKTAPFTNCDAYT 109
Query: 256 FIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY----DKSGCLEDAGV-- 309
+ LKAC+ ++ GK +H H I+ + + VV SL++MY + C E V
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 310 AFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVAT 369
FD++ K++ A+ +I+ Y + G A + F M +K + + + S +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 370 LANGRLLHSIAVKTG--HLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMI 427
+ + + + +K G ++ D+FV ++ ++MYA+ G I+ + VF R+ WN MI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 428 GGYVKHGLGEKALEAFRMML-DEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYG 486
G YV++ +++E F + + V DE+T+++ SA S + +E G++ + K +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 487 ITPTI 491
P +
Sbjct: 350 ELPIV 354
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 320/603 (53%), Gaps = 6/603 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
ME A ++F M + + WN ++ G+ G + + + M K F+ V+K
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A ++ G+ +HAM I+LG D ++ SL+ +Y K G A +A KVF + + D+V+W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
++I+ G + +F M + KP++F S + A + + G+ IH +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 181 YGFES-DTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
E+ D +V +++ MY + G VSY R+F + ++ V+WN + +
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 240 IFYQMLLK-GFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
F +M + G +P++ T I +L A + L G+ +H + ++ + V+ T+L+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
+ G L+ A V FD +A K++ ++ +II +Y Q G+ AL+ F+++ + + T+A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
S L + +L+ GR +H+ VK+ + + + +LV MYA CG ++DA F L+
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
D SWN +I Y HG G ++ F M+ P++ TF +L+ACS G+++EG ++F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
S+K+ YGI P I+H+ CM+D++GR G F+ + F+ E P A +W +LL A H +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
I + E AE++ ++E YV ++ A GRW D + ++ L+ S+GI + S S +E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 599 VDG 601
G
Sbjct: 676 AKG 678
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 226/450 (50%), Gaps = 20/450 (4%)
Query: 96 YSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVL 155
++ L ++AL++F + D W +I G EA + ++ M + VK + F
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 156 TSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAH 215
++++ G+ IHA++ K GF SD V N+L+S+YM+ G +VFE +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 216 QDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQL 275
+D VSWN++ S + L +F +ML GFKP+ + + L ACS + GK++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 276 HAHTIKHSLD-GNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGE 334
H H ++ ++ G+ +V TS++DMY K G + A F+ + +++ A+ +I YA+ G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 335 AEMALKCFRKMRLE-GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVST 393
A CF+KM + G++ + T + L P + + GR +H A++ G L M + T
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLL----PASAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 394 ALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVP 453
AL+ MY +CG + AE +F A ++ SWN +I YV++G ALE F+ + D VP
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 454 DEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYG----ITPTIKHFACMIDILGRAGK-F 507
D T +L A + + EG++ H +K Y I ++ H M L A K F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 508 TEIENFITETKLTPNALVWENLLGACSWHG 537
I L + + W +++ A + HG
Sbjct: 490 NHI--------LLKDVVSWNSIIMAYAVHG 511
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 298 YDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTL 357
+ S +EDA FD + D F + +I + G A++ + +M G+K++ FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
+ + +++L G+ +H++ +K G + D++V +L+++Y K G DAE VF+
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
RD SWN MI GY+ G G +L F+ ML G+ PD + + L ACSH+ + GK+
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
+ T + ++D+ + G+ + E I + N + W ++G + +G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER-IFNGMIQRNIVAWNVMIGCYARNG 312
Query: 538 NI 539
+
Sbjct: 313 RV 314
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 308/599 (51%), Gaps = 1/599 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A RVF + + WN L+N A+SGD + LF M + ++ S V K F++
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
+ G+ +H ++ G + SLV Y K D+A KVF + + DV++W +I
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I G ++ +F M S ++ + + S+ ++ G ++H++ K F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+ N L+ MY + G + VF ++ + VS+ ++ + + + +++F +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M +G P++ T +L C+ + GK++H ++ L + V +L+DMY K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEG-IKSNEFTLASCLN 362
+++A + F + KD+ ++ II Y++ A AL F + E +E T+A L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 363 GCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS 422
C+ ++ GR +H ++ G+ D V+ +LV MYAKCG++ A +F A +D S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 423 WNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
W +MI GY HG G++A+ F M G DEI+FV +L ACSH GL++EG + F+ ++
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
I PT++H+AC++D+L R G + FI + P+A +W LL C H +++L
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 543 EKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
EK AEK+ ELEP+ YV ++I A +W +R + +G++K P CSWIE+ G
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 242/465 (52%), Gaps = 7/465 (1%)
Query: 15 NVVSWNALLNGYAESGDGQKVMHLFC--SMKDMEKKFSKFSLSTVLKGFANSGYIKAGQV 72
+V N L + ESG+ + + L C D++ + +L +VL+ A+S +K G+
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR----TLCSVLQLCADSKSLKDGKE 115
Query: 73 VHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGC 132
V G +D L L MY+ CG A +VF +K + W ++ L + G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 133 CQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNA 192
+ +F M S V+ + + + + ++ + GE +H I K GF VGN+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 193 LVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPN 252
LV+ Y++N RV +VF+ + +D +SWN++ + + ++GL +F QML+ G + +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 253 MCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFD 312
+ T + + C+ + G+ +H+ +K +L+DMY K G L+ A F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 313 SLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLAN 372
++++ + +YT++I YA+ G A A+K F +M EGI + +T+ + LN C+ L
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 373 GRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVK 432
G+ +H + D+FVS AL+ MYAKCGS+ +AE VF ++D SWN +IGGY K
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 433 HGLGEKALEAFRMMLDEG-YVPDEITFVVVLSACSHMGLIEEGKK 476
+ +AL F ++L+E + PDE T VL AC+ + ++G++
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 3 LAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA 62
LA +F + ++VSW ++ GY G G++ + LF M+ + + S ++L +
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLS--CSLVDMYSKCGLADNALKVFYRIKD----PD 116
+SG + G + +R C ++ + +VDM ++ G + +K + I++ PD
Sbjct: 612 HSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTG---DLIKAYRFIENMPIPPD 667
Query: 117 VVAWGAIIT-CL---DQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQ 168
WGA++ C D + + A K+F L E++ +VL + + A E +Q
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT---GYYVLMANIYAEAEKWEQ 720
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 311/601 (51%), Gaps = 1/601 (0%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+++ ++F + + + V WN +LNGYA+ G V+ F M+ + + + VL
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A+ I G +H + + G + + SL+ MYSKCG D+A K+F + D V W
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I+ Q G +E+ F M S V P+ +SL+ + ++ + + IH I +
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
+ D + +AL+ Y + VS +F D V + A+ S + L +
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
F ++ PN T + IL L + G++LH IK D +G +++DMY K
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G + A F+ L+ +D+ ++ ++IT AQ+ A+ FR+M + GI + ++++
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 361 LNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDT 420
L+ C+ + + + G+ +H +K D++ + L+ MYAKCG++ A VFK ++
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 421 ASWNMMIGGYVKHGLGEKALEAFRMMLDE-GYVPDEITFVVVLSACSHMGLIEEGKKHFS 479
SWN +I HG + +L F M+++ G PD+ITF+ ++S+C H+G ++EG + F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 480 SIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNI 539
S+ + YGI P +H+AC++D+ GRAG+ TE + P+A VW LLGAC H N+
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 540 ELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
EL E + KL++L+P YV S+ A W + VR+L+ + ++K P SWIE+
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Query: 600 D 600
+
Sbjct: 789 N 789
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 235/509 (46%), Gaps = 7/509 (1%)
Query: 33 QKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSL 92
+K + L S + +E+ + LS +L+ +N ++ G+ VHA I + D + +
Sbjct: 18 KKSLPLRNSSRFLEETIPR-RLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI 76
Query: 93 VDMYSKCGLADNALKVFYRI--KDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKP 150
+ MY+ CG + K+FYR+ + + W +II+ + G +A + M V P
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 151 NQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVF 210
+ LV+A + + + + + G + + V ++L+ Y+E G++ S++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 211 EAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVG 270
+ + +D V WN + + + + D ++ F M + PN TF +L C+S +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 271 FGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYA 330
G QLH + +D + SL+ MY K G +DA F ++ D + +I+ Y
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 331 QAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMF 390
Q+G E +L F +M G+ + T +S L S L + +H ++ LD+F
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 391 VSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEG 450
+++AL+ Y KC + A+ +F D + MI GY+ +GL +LE FR ++
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 451 YVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTE 509
P+EIT V +L + ++ G++ H IKK G +ID+ + G+
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKK--GFDNRCNIGCAVIDMYAKCGRMN- 493
Query: 510 IENFITETKLTPNALVWENLLGACSWHGN 538
+ I E + + W +++ C+ N
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDN 522
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 316/599 (52%), Gaps = 32/599 (5%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A +VF +P+ N V+WNAL+ GY ++G ++ + LF M+ + ++ ++ST L AN
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
G ++ G+ HA+AI G LD L SL++ Y K GL + A VF R+ + DVV W I
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I+ QQG ++A + LMR +K + L +L+ A T + + G+ + ++ F
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
ESD ++ + ++ MY + G + +VF++ +D + WN L + + + + LR+FY
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M L+G PN+ T+ +I+ + V K DM+ +
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAK----------------------DMFLQ--- 501
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
++ +G+ +L ++T ++ Q G +E A+ RKM+ G++ N F++ L+
Sbjct: 502 MQSSGII------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Query: 364 CSPVATLANGRLLHSIAVKT-GHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTAS 422
C+ +A+L GR +H ++ H + + T+LV MYAKCG I+ AE VF +
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 423 WNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIK 482
N MI Y +G ++A+ +R + G PD IT VLSAC+H G I + + F+ I
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 483 KIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELD 542
+ P ++H+ M+D+L AG+ + I E P+A + ++L+ +C+ EL
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 543 EKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
+ + KLLE EP+ NYV S+ A +G W++ +R ++ ++G+KK+P CSWI++ G
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 260/512 (50%), Gaps = 6/512 (1%)
Query: 28 ESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHAMAIRLG--CALD 85
++G+ ++ + L M + +L+G + G+ +HA ++ G A +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 86 KFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRE 145
+++ LV Y+KC + A +F +++ +V +W AII + G C+ A F M E
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 146 SSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSY 205
+ + P+ FV+ ++ +A R G +H + K G E V ++L MY + G +
Sbjct: 167 NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD 226
Query: 206 GSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSS 265
S+VF+ I +++V+WNAL + ++ +R+F M +G +P T L A ++
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 266 LSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAI 325
+ V GKQ HA I + ++ ++++GTSL++ Y K G +E A + FD + KD+ + I
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 326 ITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGH 385
I+ Y Q G E A+ + MRLE +K + TLA+ ++ + L G+ + ++
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 386 LLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRM 445
D+ +++ ++ MYAKCGSI DA+ VF + +D WN ++ Y + GL +AL F
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 446 MLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAG 505
M EG P+ IT+ +++ + G ++E K F ++ GI P + + M++ + + G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNG 525
Query: 506 KFTEIENFI---TETKLTPNALVWENLLGACS 534
E F+ E+ L PNA L AC+
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 256/544 (47%), Gaps = 40/544 (7%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E+A+ +F + NV SW A++ G + + F M + E F + V K
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ + G+ VH ++ G F++ SL DMY KCG+ D+A KVF I D + VAW
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
A++ Q G +EA ++F+ MR+ V+P + +++ + A+ G G+ HA+
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
G E D ++G +L++ Y + G + Y VF+ + +D V+WN + S + + + +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
M L+ K + T ++ A + ++ GK++ + I+HS + + V+ ++++DMY K
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
G + DA FDS KDL + ++ +YA++G + AL+ F M+LEG+ N T
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW--- 479
Query: 361 LNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVF----KGSA 416
++ + G +D+A+ +F
Sbjct: 480 --------------------------------NLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Query: 417 LRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
+ + SW M+ G V++G E+A+ R M + G P+ + V LSAC+H+ + G+
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRT 567
Query: 477 HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWH 536
I + + + ++D+ + G + E + +KL + ++ A + +
Sbjct: 568 IHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK-VFGSKLYSELPLSNAMISAYALY 626
Query: 537 GNIE 540
GN++
Sbjct: 627 GNLK 630
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 42/371 (11%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEK-KFSKFSLSTVLK 59
+E A+ VF M E +VV+WN +++GY + G + +++ C + +EK K+ +L+T++
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMS 383
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
A + +K G+ V IR D L+ +++DMY+KCG +A KVF + D++
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W ++ + G EA ++F M+ V PN
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPN---------------------------- 475
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQ----DSVSWNALFSRFQDYESPD 235
+ N ++ + NG+V +F + + +SW + + +
Sbjct: 476 -------VITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 236 QGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHV-VGTSL 294
+ + +M G +PN + V L AC+ L+ + G+ +H + I++ + V + TSL
Sbjct: 529 EAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSL 588
Query: 295 VDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
VDMY K G + A F S +L A+I++YA G + A+ +R + G+K +
Sbjct: 589 VDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 355 FTLASCLNGCS 365
T+ + L+ C+
Sbjct: 649 ITITNVLSACN 659
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 321 AYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIA 380
+Y ++S + GE + AL +M ++ L GC L+ G+ +H+
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 381 VKTG--HLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEK 438
+K G + + ++ T LV YAKC +++ AE +F +R+ SW +IG + GL E
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 439 ALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMI 498
AL F ML+ PD V AC + G+ + K G+ + + +
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK-SGLEDCVFVASSLA 215
Query: 499 DILGRAGKFTEIENFITETKLTPNALVWENLL 530
D+ G+ G + E NA+ W L+
Sbjct: 216 DMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 309/603 (51%), Gaps = 11/603 (1%)
Query: 4 AKRVFKSMP-ELNVVSWNALLNGYAESGDGQKVMHLF-----CSMKDMEKKFSKFSLSTV 57
A+ VF++ +V WN+L++GY+++ + +F CS+ + F+ V
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS----FTFPNV 113
Query: 58 LKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDV 117
+K + G G+++H + ++ G D ++ SLV MY+K L +N+L+VF + + DV
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173
Query: 118 VAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAV 177
+W +I+C Q G ++A ++F M S +PN LT + A + G+ IH
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 178 ICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQG 237
K GFE D V +ALV MY + + VF+ + + V+WN++ +
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 238 LRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDM 297
+ I +M+++G +P+ T IL ACS ++ GK +H + I+ ++ + V SL+D+
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 298 YDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTL 357
Y K G A F ++ +I+SY G A++ + +M G+K + T
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 358 ASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSAL 417
S L CS +A L G+ +H ++ D + +AL+ MY+KCG+ +A +F
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
+D SW +MI Y HG +AL F M G PD +T + VLSAC H GLI+EG K
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTP-NALVWENLLGACSWH 536
FS ++ YGI P I+H++CMIDILGRAG+ E I +T T NA + L AC H
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 537 GNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSW 596
L ++ A L+E P S Y+ ++ A+ W+ VR + G++K+P CSW
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 597 IEV 599
IE+
Sbjct: 654 IEM 656
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 247/490 (50%), Gaps = 9/490 (1%)
Query: 54 LSTVLKGFANSGY-IKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF--Y 110
L ++L+ NS ++ ++VH + LG D L SL+++Y C +A VF +
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 111 RIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSV-KPNQFVLTSLVRATTETGDQR 169
I+ DV W ++++ + + ++F + S+ P+ F ++++A G +
Sbjct: 66 DIRS-DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 170 CGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQ 229
G IH ++ K G+ D +V ++LV MY + +VF+ + +D SWN + S F
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 230 DYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHV 289
++ L +F +M GF+PN + V + ACS L + GK++H +K + +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 290 VGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEG 349
V ++LVDMY K CLE A F + K L A+ ++I Y G+++ ++ +M +EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 350 IKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAE 409
+ ++ TL S L CS L +G+ +H +++ D++V+ +L+ +Y KCG + AE
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 410 AVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMG 469
VF + SWN+MI Y+ G KA+E + M+ G PD +TF VL ACS +
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 470 LIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENF-ITETKLTPNALVWEN 528
+E+GK+ SI + T + + ++D+ + G E E F I + + + W
Sbjct: 425 ALEKGKQIHLSISESRLETDELL-LSALLDMYSKCG--NEKEAFRIFNSIPKKDVVSWTV 481
Query: 529 LLGACSWHGN 538
++ A HG
Sbjct: 482 MISAYGSHGQ 491
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 139/263 (52%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E+A+ VF+ MP ++V+WN+++ GY GD + + + M + S+ +L+++L
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+ S + G+ +H IR D +++CSL+D+Y KCG A+ A VF + + +W
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I+ G +A ++++ M VKP+ TS++ A ++ G+ IH I +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
E+D L+ +AL+ MY + G R+F +I +D VSW + S + + P + L
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ 498
Query: 241 FYQMLLKGFKPNMCTFIVILKAC 263
F +M G KP+ T + +L AC
Sbjct: 499 FDEMQKFGLKPDGVTLLAVLSAC 521
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 321/596 (53%), Gaps = 1/596 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A++VF MP ++VSWN+L++GY+ G ++ + ++ +K+ F++S+VL F N
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAI 123
+K GQ +H A++ G ++ LV MY K +A +VF + D V++ +
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 124 ITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGF 183
I + +E+ ++F L KP+ ++S++RA D + I+ + K GF
Sbjct: 280 ICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
++ V N L+ +Y + G + VF ++ +D+VSWN++ S + + +++F
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M++ + + T+++++ + L+D+ FGK LH++ IK + + V +L+DMY K G
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
+ D+ F S+ D + +I++ + G+ L+ +MR + + T L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 364 CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASW 423
C+ +A G+ +H ++ G+ ++ + AL+ MY+KCG ++++ VF+ + RD +W
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 424 NMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKK 483
MI Y +G GEKALE F M G VPD + F+ ++ ACSH GL++EG F +K
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 484 IYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDE 543
Y I P I+H+AC++D+L R+ K ++ E FI + P+A +W ++L AC G++E E
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 544 KDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIEV 599
+ + +++EL P + S+ A +W+ S +R L + I K P SWIEV
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 285/561 (50%), Gaps = 11/561 (1%)
Query: 7 VFKSM-PELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSG 65
VF+ + P NV WN+++ ++++G + + + +++ + K++ +V+K A
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 66 YIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGAIIT 125
+ G +V+ + +G D F+ +LVDMYS+ GL A +VF + D+V+W ++I+
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 126 CLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFES 185
G +EA +I++ ++ S + P+ F ++S++ A + G+ +H K G S
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 186 DTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQML 245
+V N LV+MY++ R + RVF+ + +DSVS+N + + E ++ +R+F +
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN- 299
Query: 246 LKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLE 305
L FKP++ T +L+AC L D+ K ++ + +K V L+D+Y K G +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 306 DAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCS 365
A F+S+ KD ++ +II+ Y Q+G+ A+K F+ M + +++ T ++ +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 366 PVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNM 425
+A L G+ LHS +K+G +D+ VS AL+ MYAKCG + D+ +F DT +WN
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 426 MIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIY 485
+I V+ G L+ M VPD TF+V L C+ + GK+ + + +
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-F 538
Query: 486 GITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKD 545
G ++ +I++ + G E + + E + + W ++ A +G +
Sbjct: 539 GYESELQIGNALIEMYSKCGCL-ENSSRVFERMSRRDVVTWTGMIYAYGMYG-------E 590
Query: 546 AEKLLELEPKMESNYVFPSDI 566
EK LE ME + + P +
Sbjct: 591 GEKALETFADMEKSGIVPDSV 611
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 253/516 (49%), Gaps = 13/516 (2%)
Query: 50 SKFSLSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVF 109
++ S + + ++S + + +HA+ I LG F S L+D YS ++L VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 110 YRIKDP-DVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQ 168
R+ +V W +II + G EA + + +RES V P+++ S+++A D
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 169 RCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRF 228
G+ ++ I GFESD VGNALV MY G ++ +VF+ + +D VSWN+L S +
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 229 QDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNH 288
+ ++ L I++++ P+ T +L A +L V G+ LH +K ++
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 289 VVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLE 348
VV LV MY K DA FD + +D +Y +I Y + E +++ F + L+
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLD 301
Query: 349 GIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDA 408
K + T++S L C + L+ + +++ +K G +L+ V L+ +YAKCG + A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 409 EAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHM 468
VF +DT SWN +I GY++ G +A++ F+MM+ D IT+++++S + +
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 469 GLIEEGKK-HFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWE 527
++ GK H + IK GI + +ID+ + G+ + + T + + W
Sbjct: 422 ADLKFGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWN 478
Query: 528 NLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFP 563
++ AC G D L++ +M + V P
Sbjct: 479 TVISACVRFG-------DFATGLQVTTQMRKSEVVP 507
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 174/350 (49%), Gaps = 8/350 (2%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M A+ VF SM + VSWN++++GY +SGD + M LF M ME++ + ++
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
+K G+ +H+ I+ G +D +S +L+DMY+KCG ++LK+F + D V W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
+I+ + G ++ MR+S V P+ + +R G+ IH + +
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
+G+ES+ +GNAL+ MY + G + SRVFE ++ +D V+W + + Y ++ L
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 241 FYQMLLKGFKPNMCTFIVILKAC--SSLSDVGFG--KQLHAHTIKHSLDGNHVVGTSLVD 296
F M G P+ FI I+ AC S L D G +++ H + +D +VD
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH---YKIDPMIEHYACVVD 654
Query: 297 MYDKSGCLEDAGVAFDSLANK-DLFAYTAIITSYAQAGEAEMALKCFRKM 345
+ +S + A ++ K D + +++ + +G+ E A + R++
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 294/561 (52%), Gaps = 4/561 (0%)
Query: 43 KDMEKKFSKFSLSTVLKGFANSGYIKAGQVVHAMAI---RLGCALDKFLSCSLVDMYSKC 99
K + F L+ +LK ANS Y++ G+ +HA I + A D + SL+++Y KC
Sbjct: 23 KSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKC 82
Query: 100 GLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRES-SVKPNQFVLTSL 158
A K+F + + +VV+W A++ G E K+F M S +PN+FV T +
Sbjct: 83 RETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVV 142
Query: 159 VRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDS 218
++ + +G G+ H KYG S V N LV MY RV + + + D
Sbjct: 143 FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL 202
Query: 219 VSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAH 278
+++ S + + + +GL + + + F N T++ L+ S+L D+ Q+H+
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 279 TIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMA 338
++ + +L++MY K G + A FD +++F T I+ +Y Q E A
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 339 LKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAM 398
L F KM + + NE+T A LN + ++ L G LLH + +K+G+ + V ALV M
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 399 YAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITF 458
YAK GSI+DA F G RD +WN MI G HGLG +ALEAF M+ G +P+ ITF
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442
Query: 459 VVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETK 518
+ VL ACSH+G +E+G +F+ + K + + P I+H+ C++ +L +AG F + E+F+
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 519 LTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSG 578
+ + + W LL AC N L +K AE +E P YV S+I A W +
Sbjct: 503 IEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAK 562
Query: 579 VRALLSSQGIKKEPSCSWIEV 599
VR+L++++G+KKEP SWI +
Sbjct: 563 VRSLMNNRGVKKEPGVSWIGI 583
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 215/446 (48%), Gaps = 10/446 (2%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSM-KDMEKKFSKFSLSTVLKGFA 62
A+++F MPE NVVSW A++ GY SG +V+ LF SM E + ++F + V K +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
NSG I+ G+ H ++ G +F+ +LV MYS C A++V + D+ + +
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
++ + G +E + N S +R + D +H+ + ++G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALF--SRFQDYESPDQGLRI 240
F ++ AL++MY + G+V Y RVF+ H ++ N + FQD +S ++ L +
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTIMDAYFQD-KSFEEALNL 325
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
F +M K PN TF ++L + + LS + G LH +K + +VG +LV+MY K
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 301 SGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASC 360
SG +EDA AF + +D+ + +I+ + G AL+ F +M G N T
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 361 LNGCSPVATLANG-RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR- 418
L CS + + G + + K D+ T +V + +K G DAE + + +
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 419 DTASWNMMIGG-YVK--HGLGEKALE 441
D +W ++ YV+ + LG+K E
Sbjct: 506 DVVAWRTLLNACYVRRNYRLGKKVAE 531
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 322/635 (50%), Gaps = 34/635 (5%)
Query: 1 MELAKRVFKSMPELNV-VSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLK 59
+ AK VF++ +N+L+ GYA SG + + LF M + K++ L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
A S G +H + +++G A D F+ SLV Y++CG D+A KVF + + +VV+
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 120 WGAIITCLDQQGCCQEAAKIF-NLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W ++I ++ ++A +F ++R+ V PN + ++ A + D GE ++A I
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
G E + L+ +ALV MYM+ + R+F+ + NA+ S + + L
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+F M+ G +P+ + + + +CS L ++ +GK H + +++ + + +L+DMY
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKM------------- 345
K + A FD ++NK + + +I+ Y + GE + A + F M
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 346 -------------------RLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHL 386
EG+ ++ T+ S + C + L + ++ K G
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 387 LDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMM 446
LD+ + T LV M+++CG + A ++F RD ++W IG G E+A+E F M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 447 LDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGK 506
+++G PD + FV L+ACSH GL+++GK+ F S+ K++G++P H+ CM+D+LGRAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 507 FTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDI 566
E I + + PN ++W +LL AC GN+E+ AEK+ L P+ +YV S++
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 567 SATQGRWNDFSGVRALLSSQGIKKEPSCSWIEVDG 601
A+ GRWND + VR + +G++K P S I++ G
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 245/430 (56%), Gaps = 1/430 (0%)
Query: 171 GESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQD 230
G +HA I + F D ++GN L++MY + G + +VFE + +D V+W L S +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 231 YESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVV 290
++ P L F QML G+ PN T ++KA ++ G QLH +K D N V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 291 GTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGI 350
G++L+D+Y + G ++DA + FD+L +++ ++ A+I +A+ E AL+ F+ M +G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 351 KSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA 410
+ + F+ AS CS L G+ +H+ +K+G L F L+ MYAK GSI DA
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGL 470
+F A RD SWN ++ Y +HG G++A+ F M G P+EI+F+ VL+ACSH GL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 471 IEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLL 530
++EG ++ +KK GI P H+ ++D+LGRAG FI E + P A +W+ LL
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 531 GACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKK 590
AC H N EL AE + EL+P +V +I A+ GRWND + VR + G+KK
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 591 EPSCSWIEVD 600
EP+CSW+E++
Sbjct: 498 EPACSWVEIE 507
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 192/380 (50%), Gaps = 1/380 (0%)
Query: 55 STVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKD 114
+T+LK + G++VHA ++ D + +L++MY+KCG + A KVF ++
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 115 PDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESI 174
D V W +I+ Q +A FN M PN+F L+S+++A CG +
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESP 234
H K GF+S+ VG+AL+ +Y G + VF+A+ ++ VSWNAL +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 235 DQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSL 294
++ L +F ML GF+P+ ++ + ACSS + GK +HA+ IK G +L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 295 VDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
+DMY KSG + DA FD LA +D+ ++ +++T+YAQ G + A+ F +MR GI+ NE
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 355 FTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG 414
+ S L CS L G + + K G + + + +V + + G ++ A +
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 415 SALRDTAS-WNMMIGGYVKH 433
+ TA+ W ++ H
Sbjct: 424 MPIEPTAAIWKALLNACRMH 443
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 208/483 (43%), Gaps = 65/483 (13%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A++VF+ MP+ + V+W L++GY++ + F M ++F+LS+V+K
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
A G +H ++ G + + +L+D+Y++ GL D+A VF ++ + V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
A+I ++ ++A ++F M +P+ F SL A + TG G+ +HA + K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
G + GN L+ MY ++G + ++F+ +A +D VSWN+L + + + + +
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHS--LDGNHVVGTSLVDMY 298
F +M G +PN +F+ +L ACS HS LD G ++
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACS-----------------HSGLLDE----GWHYYELM 389
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K G + +A + Y ++ +AG+ AL+ +M +E +
Sbjct: 390 KKDGIVPEA------------WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA---IWK 434
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLL-----DMFVSTALVAMYAKCGSIDDAEAVFK 413
+ LN C G A H+ D L +YA G +DA V K
Sbjct: 435 ALLNACRMHKNTELG------AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 414 -----GSALRDTASW-------NMMIGGYVKHGLGEKALEAFRMMLDE----GYVPDEIT 457
G SW +M + +H E+ + +L + GYVPD
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Query: 458 FVV 460
+V
Sbjct: 549 VIV 551
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 256 FIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLA 315
+ +LK C+ + G+ +HAH ++ + V+G +L++MY K G LE+A F+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 316 NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRL 375
+D +T +I+ Y+Q AL F +M G NEFTL+S + + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 376 LHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGL 435
LH VK G ++ V +AL+ +Y + G +DDA+ VF R+ SWN +I G+ +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 436 GEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGK-KHFSSIKKIYGITPTIKHF 494
EKALE F+ ML +G+ P ++ + ACS G +E+GK H IK + F
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA----F 298
Query: 495 A--CMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
A ++D+ ++G + I + + + W +LL A + HG
Sbjct: 299 AGNTLLDMYAKSGSIHDARK-IFDRLAKRDVVSWNSLLTAYAQHG 342
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 309/601 (51%), Gaps = 11/601 (1%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMK---DMEKKFSKFSLS-TVLK 59
A+ +F S+ +V +N L+ G++ + + +F ++ D++ S ++ + +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
GF + +AG+V+H A+ GC + L ++V MY K ++A KVF R+ + D +
Sbjct: 131 GFRDD---RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 120 WGAIITCLDQQGCCQEAAKIF-NLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W +I+ + E+ ++F +L+ ES + + L ++ A E + R G IH++
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
K G S V +S+Y + G++ GS +F D V++NA+ + + L
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+F +++L G + T + ++ L + +H + +K + + V T+L +Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K +E A FD K L ++ A+I+ Y Q G E A+ FR+M+ N T+
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
L+ C+ + L+ G+ +H + T ++VSTAL+ MYAKCGSI +A +F +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
+ +WN MI GY HG G++AL F ML+ G P +TF+ VL ACSH GL++EG + F
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
+S+ YG P++KH+ACM+DILGRAG FI + P + VWE LLGAC H +
Sbjct: 545 NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
L +EKL EL+P +V S+I + + + VR + + K P + IE
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Query: 599 V 599
+
Sbjct: 665 I 665
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 204/473 (43%), Gaps = 22/473 (4%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDME-KKFSKFSLSTVLK 59
+E A++VF MPE + + WN +++GY ++ + + +F + + + +L +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
A ++ G +H++A + GC ++ + +YSKCG +F + PD+VA
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
+ A+I G + + +F + S + L SLV +G +IH
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCL 346
Query: 180 KYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLR 239
K F S V AL ++Y + + ++F+ + SWNA+ S + + +
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 240 IFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYD 299
+F +M F PN T IL AC+ L + GK +H + + V T+L+ MY
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 300 KSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLAS 359
K G + +A FD + K+ + +I+ Y G+ + AL F +M GI T
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 360 CLNGCSPVATLANG-RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
L CS + G + +S+ + G + +V + + G + A + ++
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 419 DTAS-WNMMIGGYVKH-------GLGEKALEAFRMMLDEGYVPDEITFVVVLS 463
+S W ++G H + EK E LD PD + + V+LS
Sbjct: 587 PGSSVWETLLGACRIHKDTNLARTVSEKLFE-----LD----PDNVGYHVLLS 630
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 2/299 (0%)
Query: 175 HAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESP 234
HA I +GF +D + L + G + Y +F ++ D +N L F ESP
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 235 DQGLRIFYQMLLK-GFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS 293
L +F + KPN T+ + A S D G+ +H + D ++G++
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEG-IKS 352
+V MY K +EDA FD + KD + +I+ Y + +++ FR + E +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 353 NEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVF 412
+ TL L + + L G +HS+A KTG +V T +++Y+KCG I A+F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 413 KGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLI 471
+ D ++N MI GY +G E +L F+ ++ G T V ++ H+ LI
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 318 bits (816), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 310/601 (51%), Gaps = 34/601 (5%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFA- 62
A RVFK MP + VS+N +++GY +G+ + LF M + + S + ++KG+
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVR 138
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWGA 122
N KA ++ M R C+ + LS Y++ G D+A VF R+ + + V+W A
Sbjct: 139 NRNLGKARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYG 182
+++ Q +EA +F ++ +L V+ ++ +S++
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV------ 247
Query: 183 FESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFY 242
D + N +++ Y ++G++ ++F+ QD +W A+ S + ++ +F
Sbjct: 248 --RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 243 QMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLD----GNHVVGTSLVDMY 298
+M + N ++ +L G+ + K D N +++ Y
Sbjct: 306 KMPER----NEVSWNAML--------AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
+ G + +A FD + +D ++ A+I Y+Q+G + AL+ F +M EG + N + +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 359 SCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALR 418
S L+ C+ V L G+ LH VK G+ FV AL+ MY KCGSI++A +FK A +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 419 DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHF 478
D SWN MI GY +HG GE AL F M EG PD+ T V VLSACSH GL+++G+++F
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 479 SSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHGN 538
++ + YG+ P +H+ACM+D+LGRAG + N + P+A +W LLGA HGN
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 539 IELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWIE 598
EL E A+K+ +EP+ YV S++ A+ GRW D +R + +G+KK P SWIE
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 599 V 599
+
Sbjct: 654 I 654
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 154/368 (41%), Gaps = 67/368 (18%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSM--KDMEKKFSKFSLSTVL 58
ME A +FKS +VSWN LL G+ + + F SM +D+ S +T++
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV------VSWNTII 257
Query: 59 KGFAN--------------------------SGYIKAGQVVHAMAI-------------- 78
G+A SGYI+ V A +
Sbjct: 258 TGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNA 317
Query: 79 ---------RLGCALDKF--LSCSLVDMYS-------KCGLADNALKVFYRIKDPDVVAW 120
R+ A + F + C V ++ +CG A +F ++ D V+W
Sbjct: 318 MLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
A+I Q G EA ++F M + N+ +S + + G+ +H + K
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRI 240
G+E+ VGNAL+ MY + G + + +F+ +A +D VSWN + + + + + LR
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQ-LHAHTIKHSLDGNHVVGTSLVDMYD 299
F M +G KP+ T + +L ACS V G+Q + T + + N +VD+
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 300 KSGCLEDA 307
++G LEDA
Sbjct: 558 RAGLLEDA 565
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 167/385 (43%), Gaps = 26/385 (6%)
Query: 93 VDMYSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQ 152
+ Y + G + AL+VF R+ V++ +I+ + G + A K+F+ M E +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 153 FVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEA 212
++ VR G R I E D N ++S Y +NG V VF+
Sbjct: 131 VMIKGYVR-NRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 213 IAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFG 272
+ ++ VSWNAL S + ++ ML K + + ++ C V
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEAC-----MLFKSRE----NWALVSWNCLLGGFVKKK 233
Query: 273 KQLHAHTIKHSLDGNHVVG-TSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQ 331
K + A S++ VV +++ Y +SG +++A FD +D+F +TA+++ Y Q
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 332 AGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFV 391
E A + F KM + NE + + L G + + L + ++
Sbjct: 294 NRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVST 345
Query: 392 STALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGY 451
++ YA+CG I +A+ +F RD SW MI GY + G +AL F M EG
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 452 VPDEITFVVVLSACSHMGLIEEGKK 476
+ +F LS C+ + +E GK+
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQ 430
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 165/360 (45%), Gaps = 36/360 (10%)
Query: 184 ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQ 243
+SD N +S YM GR + RVF+ + SVS+N + S + + ++F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 244 MLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGC 303
M + ++ ++ V++K ++G ++L + + +++ Y ++GC
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGC 172
Query: 304 LEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNG 363
++DA FD + K+ ++ A++++Y Q + E A F+ + S +CL G
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WNCLLG 227
Query: 364 --CSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTA 421
+ + S+ V+ D+ ++ YA+ G ID+A +F S ++D
Sbjct: 228 GFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 422 SWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSI 481
+W M+ GY+++ + E+A E F M + +E+++ +L+ G ++ + +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLA-----GYVQGERMEMA-- 331
Query: 482 KKIYGITP--TIKHFACMIDILGRAGKFTEIEN-FITETKLTPNALVWENLLGACSWHGN 538
K+++ + P + + MI + GK +E +N F K P + W ++ S G+
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP--VSWAAMIAGYSQSGH 389
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E A +FK M ++VSWN ++ GY+ G G+ + F SMK K ++ VL
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 61 FANSGYIKAG-QVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIK-DPDVV 118
+++G + G Q + M G + +VD+ + GL ++A + + +PD
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 119 AWGAIITCLDQQGCCQ----EAAKIFNLMRESSVKPNQFVLTSLVRATT 163
WG ++ G + A KIF + E+S +VL S + A++
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENS---GMYVLLSNLYASS 625
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 311/602 (51%), Gaps = 46/602 (7%)
Query: 6 RVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVL------K 59
RVF+S+ + N VS+ A++ G A + + +F M + + LS +L +
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 60 GFANSGYI---KAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPD 116
G + I + G+ +H +A+RLG D L+ SL+++Y+K + A +F + + +
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 117 VVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHA 176
VV+W +I Q+ ++ + MR+S +PN+ S++ A +GD
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGD--------- 365
Query: 177 VICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQ 236
V G R+F +I +WNA+ S + +YE ++
Sbjct: 366 --------------------------VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 237 GLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVD 296
+ F QM + KP+ T VIL +C+ L + GKQ+H I+ + N + + L+
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 297 MYDKSGCLEDAGVAFDSLANK-DLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIK-SNE 354
+Y + +E + FD N+ D+ + ++I+ + AL FR+M + NE
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 355 FTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG 414
+ A+ L+ CS + +L +GR H + VK+G++ D FV TAL MY KCG ID A F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 415 SALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEG 474
++T WN MI GY +G G++A+ +R M+ G PD ITFV VL+ACSH GL+E G
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 475 KKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACS 534
+ SS+++I+GI P + H+ C++D LGRAG+ + E T ++++WE LL +C
Sbjct: 640 LEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Query: 535 WHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSC 594
HG++ L + AEKL+ L+P+ + YV S+ ++ +W+D + ++ L++ + K P
Sbjct: 700 VHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQ 759
Query: 595 SW 596
SW
Sbjct: 760 SW 761
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 257/540 (47%), Gaps = 51/540 (9%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFAN 63
A VF MPE +VVSWN +++ G +K + ++ M S+F+L++VL +
Sbjct: 91 ACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSK 150
Query: 64 SGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCG-LADNALKVFYRIKDPDVVAWGA 122
G H +A++ G + F+ +L+ MY+KCG + D ++VF + P+ V++ A
Sbjct: 151 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 210
Query: 123 IITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRAT---------TETGDQRCGES 173
+I L ++ EA ++F LM E V+ + L++++ + +E G+
Sbjct: 211 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 270
Query: 174 IHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRF-QDYE 232
IH + + GF D + N+L+ +Y +N ++ +F + + VSWN + F Q+Y
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 330
Query: 233 SPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGT 292
S D+ + +M GF+PN T I +L AC DV G+++
Sbjct: 331 S-DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI----------------- 372
Query: 293 SLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKS 352
F S+ + A+ A+++ Y+ E A+ FR+M+ + +K
Sbjct: 373 ------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKP 414
Query: 353 NEFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVF 412
++ TL+ L+ C+ + L G+ +H + ++T + + + L+A+Y++C ++ +E +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 413 KGSALR-DTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYV-PDEITFVVVLSACSHMGL 470
D A WN MI G+ + L KAL FR M + P+E +F VLS+CS +
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 471 IEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLL 530
+ G++ + K ++ + A + D+ + G+ F + L N ++W ++
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMI 592
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 208/427 (48%), Gaps = 55/427 (12%)
Query: 155 LTSLVRATTETGDQRC---GESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFE 211
L SL+R D+RC G+ IH I + G +SDT + N L+ +Y+E G Y +VF+
Sbjct: 9 LASLLRCYR---DERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFD 65
Query: 212 AIA-------------------------------HQDSVSWNALFSRFQDYESPDQGLRI 240
++ +D VSWN + S ++ L +
Sbjct: 66 EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVV 125
Query: 241 FYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDK 300
+ +M+ GF P+ T +L ACS + D FG + H +K LD N VG +L+ MY K
Sbjct: 126 YKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAK 185
Query: 301 SGCLEDAGV-AFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIK------SN 353
G + D GV F+SL+ + +YTA+I A+ + A++ FR M +G++ SN
Sbjct: 186 CGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN 245
Query: 354 EFTLASCLNGCSPVATLAN---GRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEA 410
++++ GC ++ + G+ +H +A++ G D+ ++ +L+ +YAK ++ AE
Sbjct: 246 ILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305
Query: 411 VFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGL 470
+F + SWN+MI G+ + +K++E M D G+ P+E+T + VL AC G
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGD 365
Query: 471 IEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTE-IENF--ITETKLTPNALVWE 527
+E G++ FSSI + P++ + M+ + E I NF + L P+
Sbjct: 366 VETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 420
Query: 528 NLLGACS 534
+L +C+
Sbjct: 421 VILSSCA 427
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 205/464 (44%), Gaps = 76/464 (16%)
Query: 54 LSTVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIK 113
L+++L+ + + +G+V+H +R+G D +L L+D+Y +CG D A KVF +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 114 DPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVK------------------------ 149
DV +W A +T + G EA ++F+ M E V
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 150 -------PNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENG- 201
P++F L S++ A ++ D G H V K G + + VGNAL+SMY + G
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 202 RVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFK------PNMCT 255
V YG RVFE+++ + VS+ A+ + +++F M KG + N+ +
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 256 FIVILKACSSLSDV---GFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFD 312
+ C SLS++ GKQ+H ++ G+ + SL+++Y K+ + A + F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 313 SLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLAN 372
+ ++ ++ +I + Q ++ +++ +MR G + NE T S L C
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC-------- 360
Query: 373 GRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVK 432
+ G ++ +F ++WN M+ GY
Sbjct: 361 ---------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 433 HGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK 476
+ E+A+ FR M + PD+ T V+LS+C+ + +E GK+
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 190/444 (42%), Gaps = 51/444 (11%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
M A+ +F MPE+NVVSWN ++ G+ + K + M+D + ++ + +VL
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAW 120
SG ++ G+ ++F I P V AW
Sbjct: 360 CFRSGDVETGR-----------------------------------RIFSSIPQPSVSAW 384
Query: 121 GAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICK 180
A+++ +EA F M+ ++KP++ L+ ++ + G+ IH V+ +
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 181 YGFESDTLVGNALVSMYMENGRVSYGSRVF-EAIAHQDSVSWNALFSRFQDYESPDQGLR 239
++ + + L+++Y E ++ +F + I D WN++ S F+ + L
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 240 IFYQMLLKG-FKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+F +M PN +F +L +CS L + G+Q H +K + V T+L DMY
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 299 DKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLA 358
K G ++ A FD++ K+ + +I Y G + A+ +RKM G K + T
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 359 SCLNGCSPVATLANG-------RLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAV 411
S L CS + G + +H I + H + +V + G ++DAE +
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI------CIVDCLGRAGRLEDAEKL 678
Query: 412 FKGSALRDTAS-WNMMIGGYVKHG 434
+ + + ++ W +++ HG
Sbjct: 679 AEATPYKSSSVLWEILLSSCRVHG 702
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 179/368 (48%), Gaps = 13/368 (3%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E +R+F S+P+ +V +WNA+L+GY+ ++ + F M+ K K +LS +L
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 61 FANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYR-IKDPDVVA 119
A +++ G+ +H + IR + + + L+ +YS+C + + +F I + D+
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVK-PNQFVLTSLVRATTETGDQRCGESIHAVI 178
W ++I+ +A +F M +++V PN+ +++ + + G H ++
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
K G+ SD+ V AL MY + G + + F+A+ +++V WN + + D+ +
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQL-----HAHTIKHSLDGNHVVGTS 293
++ +M+ G KP+ TF+ +L ACS V G ++ H I+ LD H +
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD--HYI--C 661
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQA-GEAEMALKCFRK-MRLEGIK 351
+VD ++G LEDA ++ K I+ S + G+ +A + K MRL+
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 352 SNEFTLAS 359
S + L S
Sbjct: 722 SAAYVLLS 729
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 298/567 (52%), Gaps = 15/567 (2%)
Query: 42 MKDMEKKFSKFSLSTVLKGFANSGYIK---AGQVVHAMAIRLGCALDKFLS-CSLVDMYS 97
+++ K++ +++T + K +GQ +H +R G D + SLV+MY+
Sbjct: 48 IEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYA 107
Query: 98 KCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTS 157
KCGL A+ VF + DV + A+I+ G +A + + MR + + P+++ S
Sbjct: 108 KCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPS 166
Query: 158 LVRAT--TETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAH 215
L++ + E D + +H + K GF+SD VG+ LV+ Y + V +VF+ +
Sbjct: 167 LLKGSDAMELSDVK---KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD 223
Query: 216 QD-SVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQ 274
+D SV WNAL + + + L +F +M +G + T +L A + D+ G+
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS 283
Query: 275 LHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGE 334
+H +K + VV +L+DMY KS LE+A F+++ +DLF + +++ + G+
Sbjct: 284 IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGD 343
Query: 335 AEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTGHL----LDMF 390
+ L F +M GI+ + TL + L C +A+L GR +H + +G L + F
Sbjct: 344 HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF 403
Query: 391 VSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEG 450
+ +L+ MY KCG + DA VF ++D+ASWN+MI GY GE AL+ F M G
Sbjct: 404 IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 451 YVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFTEI 510
PDEITFV +L ACSH G + EG+ + ++ +Y I PT H+AC+ID+LGRA K E
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 511 ENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISATQ 570
+ N +VW ++L +C HGN +L ++L ELEP+ YV S++
Sbjct: 524 YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEA 583
Query: 571 GRWNDFSGVRALLSSQGIKKEPSCSWI 597
G++ + VR + Q +KK P CSWI
Sbjct: 584 GKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 185/367 (50%), Gaps = 6/367 (1%)
Query: 13 ELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKGFANSGYIKAGQV 72
E +V +NAL++G+ +G M + M+ K++ ++LKG +++ + +
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKK 181
Query: 73 VHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKD-PDVVAWGAIITCLDQQG 131
VH +A +LG D ++ LV YSK ++A KVF + D D V W A++ Q
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 132 CCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGN 191
++A +F+ MRE V ++ +TS++ A T +GD G SIH + K G SD +V N
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 192 ALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIFYQMLLKGFKP 251
AL+ MY ++ + + +FEA+ +D +WN++ D L +F +ML G +P
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 252 NMCTFIVILKACSSLSDVGFGKQLHAHTIKHSL----DGNHVVGTSLVDMYDKSGCLEDA 307
++ T +L C L+ + G+++H + I L N + SL+DMY K G L DA
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 308 GVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPV 367
+ FDS+ KD ++ +I Y E+AL F M G+K +E T L CS
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 368 ATLANGR 374
L GR
Sbjct: 482 GFLNEGR 488
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 175/354 (49%), Gaps = 11/354 (3%)
Query: 1 MELAKRVFKSMPELN-VVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLK 59
+E A++VF +P+ + V WNAL+NGY++ + + +F M++ S+ ++++VL
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 60 GFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVA 119
F SG I G+ +H +A++ G D +S +L+DMY K + A +F + + D+
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 120 WGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVIC 179
W +++ D G +F M S ++P+ LT+++ R G IH +
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
Query: 180 KYGF----ESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPD 235
G S+ + N+L+ MY++ G + VF+++ +DS SWN + + + +
Sbjct: 391 VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 236 QGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAH--TIKHSLD-GNHVVGT 292
L +F M G KP+ TF+ +L+ACS + G+ A T+ + L +H
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY--A 508
Query: 293 SLVDMYDKSGCLEDA-GVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKM 345
++DM ++ LE+A +A + + +I++S G ++AL +++
Sbjct: 509 CVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 299/602 (49%), Gaps = 6/602 (0%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSK--FSLSTVLKGF 61
A+++F+ MP+ +++S+N ++ Y G + +F M K ++ V K
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 62 ANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVVAWG 121
+K G VVH +R DK++ +L+ MY G + A VF +K+ DV++W
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 122 AIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVICKY 181
+I+ + G +A +F+ M SV + + S++ D G ++H ++ +
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 182 GFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGLRIF 241
V NALV+MY++ GR+ VF+ + +D ++W + + + + + L +
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 242 YQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKS 301
M +G +PN T ++ C V GK LH ++ + + ++ TSL+ MY K
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 302 GCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCL 361
++ F + ++AII Q AL F++MR E ++ N TL S L
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 362 NGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKG----SAL 417
+ +A L +H KTG + + +T LV +Y+KCG+++ A +F G
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 418 RDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKKH 477
+D W +I GY HG G AL+ F M+ G P+EITF L+ACSH GL+EEG
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 478 FSSIKKIYGITPTIKHFACMIDILGRAGKFTEIENFITETKLTPNALVWENLLGACSWHG 537
F + + Y H+ C++D+LGRAG+ E N IT P + VW LL AC H
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Query: 538 NIELDEKDAEKLLELEPKMESNYVFPSDISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
N++L E A KL ELEP+ NYV ++I A GRW D VR+++ + G++K+P S I
Sbjct: 608 NVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Query: 598 EV 599
E+
Sbjct: 668 EI 669
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 243/519 (46%), Gaps = 14/519 (2%)
Query: 56 TVLKGFANSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDP 115
++L FA + I + +H I G LS +L Y+ CG A K+F +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILS-TLSVTYALCGHITYARKLFEEMPQS 78
Query: 116 DVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVK--PNQFVLTSLVRATTETGDQRCGES 173
++++ +I ++G +A +F M VK P+ + + +A E + G
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 174 IHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYES 233
+H I + F D V NAL++MYM G+V VF+ + ++D +SWN + S +
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 234 PDQGLRIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTS 293
+ L +F M+ + + T + +L C L D+ G+ +H + L V +
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 294 LVDMYDKSGCLEDAGVAFDSLANKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSN 353
LV+MY K G +++A FD + +D+ +T +I Y + G+ E AL+ R M+ EG++ N
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 354 EFTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFK 413
T+AS ++ C + +G+ LH AV+ D+ + T+L++MYAKC +D VF
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 414 GSALRDTASWNMMIGGYVKHGLGEKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEE 473
G++ T W+ +I G V++ L AL F+ M E P+ T +L A + + + +
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 474 GKKHFSSIKKIYGITPTIKHFACMIDILGRAGKFT---EIENFITETKLTPNALVWENLL 530
+ K G ++ ++ + + G +I N I E + + ++W L+
Sbjct: 439 AMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 531 GACSWHGNIELDEKDAEKLLELEPKMESNYVFPSDISAT 569
HG D L++ +M + V P++I+ T
Sbjct: 498 SGYGMHG-------DGHNALQVFMEMVRSGVTPNEITFT 529
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 211/452 (46%), Gaps = 17/452 (3%)
Query: 1 MELAKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFSKFSLSTVLKG 60
+E+A+ VF M +V+SWN +++GY +G + +F M + ++ ++L
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 61 FANSGYIKAGQVVHAMA--IRLGCALDKFLSCSLVDMYSKCGLADNALKVFYRIKDPDVV 118
+ ++ G+ VH + RLG ++ + +LV+MY KCG D A VF R++ DV+
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIE--VKNALVNMYLKCGRMDEARFVFDRMERRDVI 285
Query: 119 AWGAIITCLDQQGCCQEAAKIFNLMRESSVKPNQFVLTSLVRATTETGDQRCGESIHAVI 178
W +I + G + A ++ LM+ V+PN + SLV + G+ +H
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 179 CKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQDYESPDQGL 238
+ SD ++ +L+SMY + RV RVF + + W+A+ + E L
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 239 RIFYQMLLKGFKPNMCTFIVILKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMY 298
+F +M + +PN+ T +L A ++L+D+ +H + K + T LV +Y
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 299 DKSGCLEDAGVAFDSLA----NKDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNE 354
K G LE A F+ + +KD+ + A+I+ Y G+ AL+ F +M G+ NE
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Query: 355 FTLASCLNGCSPVATLANGRLLHSIAVKTGHLLDMFVS---TALVAMYAKCGSIDDAEAV 411
T S LN CS + G L ++ H + S T +V + + G +D+A +
Sbjct: 526 ITFTSALNACSHSGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583
Query: 412 FKGSALRDTAS-WNMMIGGYVKH---GLGEKA 439
T++ W ++ V H LGE A
Sbjct: 584 ITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 323/633 (51%), Gaps = 45/633 (7%)
Query: 4 AKRVFKSMPELNVVSWNALLNGYAESGDGQKVMHLFCSMKDMEKKFS-KFSLSTVLKGFA 62
A +VF M E N+V+W +++GY G K + L+ M D E++ + +F S VLK
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 63 NSGYIKAGQVVHAMAIRLGCALDKFLSCSLVDM--------------------------- 95
G I+ G +V+ + D L S+VDM
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 96 ----YSKCGLADNALKVFYRIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVKPN 151
Y K GL D A+ +F+R+ P+VV+W +I+ +G + + + RE V +
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL-D 237
Query: 152 QFVLTSLVRATTETGDQRCGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVF- 210
F L ++A + G G+ +H + K G ES +AL+ MY G + Y + VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 211 -EAIAHQDSVS-WNALFSRFQDYESPDQGLRIFYQMLLKGFKPNMC----TFIVILKACS 264
E +A SV+ WN++ S F E + L +LL+ ++ ++C T LK C
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAAL----WLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 265 SLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAFDSLANKDLFAYTA 324
+ ++ G Q+H+ + + +++VG+ LVD++ G ++DA F L NKD+ A++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 325 IITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLLHSIAVKTG 384
+I ++G +A FR++ G+ +++F +++ L CS +A+L G+ +H + +K G
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 385 HLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLGEKALEAFR 444
+ + +TALV MY KCG ID+ +F G RD SW +I G+ ++G E+A F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 445 MMLDEGYVPDEITFVVVLSACSHMGLIEEGKKHFSSIKKIYGITPTIKHFACMIDILGRA 504
M++ G P+++TF+ +LSAC H GL+EE + ++K YG+ P ++H+ C++D+LG+A
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 505 GKFTEIENFITETKLTPNALVWENLLGACSWHGNIELDEKDAEKLLELEPKMESNYVFPS 564
G F E I + L P+ +W +LL AC H N L AEKLL+ P S Y S
Sbjct: 594 GLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Query: 565 DISATQGRWNDFSGVRALLSSQGIKKEPSCSWI 597
+ AT G W+ S VR G KE SWI
Sbjct: 654 NAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 244/527 (46%), Gaps = 45/527 (8%)
Query: 54 LSTVLKGFANSGYIKA---GQVVHAMAIRLGCALDKFLSCSLVDMYSKCGLADNALKVFY 110
L + G + G ++A G+ + A I+ G + + F++ +++ MY L +A KVF
Sbjct: 5 LKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFD 64
Query: 111 RIKDPDVVAWGAIITCLDQQGCCQEAAKIFNLMRESSVK-PNQFVLTSLVRATTETGDQR 169
+ + ++V W +++ G +A +++ M +S + N+F+ +++++A GD +
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 170 CGESIHAVICKYGFESDTLVGNALVSMYMENGRVSYGSRVFEAIAHQDSVSWNALFSRFQ 229
G ++ I K D ++ N++V MY++NGR+ + F+ I S SWN L S +
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 230 DYESPDQGLRIFYQM----------LLKGF----KPNMCTFIVI---------------- 259
D+ + +F++M L+ GF P F+V
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 260 LKACSSLSDVGFGKQLHAHTIKHSLDGNHVVGTSLVDMYDKSGCLEDAGVAF--DSLA-N 316
LKACS + GKQLH +K L+ + ++L+DMY G L A F + LA N
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 317 KDLFAYTAIITSYAQAGEAEMALKCFRKMRLEGIKSNEFTLASCLNGCSPVATLANGRLL 376
+ + ++++ + E E AL ++ + + +TL+ L C L G +
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 377 HSIAVKTGHLLDMFVSTALVAMYAKCGSIDDAEAVFKGSALRDTASWNMMIGGYVKHGLG 436
HS+ V +G+ LD V + LV ++A G+I DA +F +D +++ +I G VK G
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 437 EKALEAFRMMLDEGYVPDEITFVVVLSACSHMGLIEEGKK-HFSSIKKIYGITPTIKHFA 495
A FR ++ G D+ +L CS + + GK+ H IKK Y P
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--T 482
Query: 496 CMIDILGRAGKFTEIENFIT--ETKLTPNALVWENLLGACSWHGNIE 540
++D+ + G EI+N + + L + + W ++ +G +E
Sbjct: 483 ALVDMYVKCG---EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVE 526
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,438,088
Number of Sequences: 539616
Number of extensions: 8881535
Number of successful extensions: 28369
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 20022
Number of HSP's gapped (non-prelim): 2499
length of query: 601
length of database: 191,569,459
effective HSP length: 123
effective length of query: 478
effective length of database: 125,196,691
effective search space: 59844018298
effective search space used: 59844018298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)