Your job contains 1 sequence.
>036161
VELMNSNNILIISNLAFCNSPFRTIHPVYCSIAPNTDGIDPDCYIESGNGLVAVKSGWDH
DGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKGRGGNIENIII
RNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAPICMKNVSLL
VLAPSVKWQCQFVSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNFGVQMNCILGMET
AFSKLRL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036161
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 402 1.9e-37 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 261 4.8e-29 2
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 251 7.7e-28 2
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 245 6.8e-27 2
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 225 3.5e-22 2
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 199 2.0e-19 2
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 230 1.5e-18 1
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 190 2.1e-18 2
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 187 3.9e-18 2
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 211 1.8e-16 1
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 143 4.4e-10 2
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 146 4.4e-08 1
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 129 1.5e-07 2
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 86/162 (53%), Positives = 107/162 (66%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
APNTDGIDPD CYIESG+ LVAVKSGWD G+A+ARPSSNI +RR+SGTT T
Sbjct: 255 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRT 314
Query: 84 CSGVGIGREMSGRIFNVTVD--H---------LDTDKXXXXXXXXXXXXXXKMERVKIPI 132
CSGVGIG EMSG IFN+TV+ H + TDK +E+VK+PI
Sbjct: 315 CSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPI 374
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAPICM 174
+ S GSN H D+ DPKA+P+++GI NV S+N+ KAP+ +
Sbjct: 375 RFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLL 416
Score = 242 (90.2 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 53/128 (41%), Positives = 75/128 (58%)
Query: 105 LDTDKXXXXXXXXXXXXXXKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFS 164
+ TDK +E+VK+PI+ S GSN H D+ DPKA+P+++GI NV S
Sbjct: 347 IKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVS 406
Query: 165 VNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQL-QNK 211
+N+ KAP +C++NV+LL L + KW+C+ VSG+ VFPL CPQL Q K
Sbjct: 407 LNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQKK 466
Query: 212 SS-SWCSF 218
S + CS+
Sbjct: 467 GSIAQCSY 474
Score = 91 (37.1 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 35/93 (37%), Positives = 40/93 (43%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPDCYIESGNGLVA---VKSGWDHDG 62
NSPF TIHPVYCS APNTDGIDPD S N + ++SG D
Sbjct: 228 NSPFWTIHPVYCSNVVIRNMTILAPMNAPNTDGIDPD---SSTNVCIEDCYIESGDDLVA 284
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 95
+ +AV R S G R SG
Sbjct: 285 VKSGWDQYGMAVARPSSNIVIRRISGTTRTCSG 317
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 261 (96.9 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 62/158 (39%), Positives = 86/158 (54%)
Query: 33 APNTDGIDPD-----C----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+PNTDGIDPD C YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P
Sbjct: 224 SPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSPF 283
Query: 84 CSGVGIGREMSGRIFNVTVDHLD-----------TDKXXXXXXXXXXXXXXKMERVKIPI 132
+G+ IG E SG I N+ +H+ T+ ++ K I
Sbjct: 284 -AGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGI 342
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
KI+ + HPDE +P A+P ++GI NV+ VN A
Sbjct: 343 KIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNA 380
Score = 137 (53.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA---------P---I 172
++ K IKI+ + HPDE +P A+P ++GI NV+ VN A P I
Sbjct: 335 VDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGI 394
Query: 173 CMKNVSLLVLAPSVK-WQCQFVSGFNGQVFPLPCPQLQNKS-SSWCS 217
C+ ++L S K W+C VSG + +V P PC +L+ S+ CS
Sbjct: 395 CLSEINLHGSLNSYKTWKCSDVSGTSLKVSPWPCSELRTTGGSNLCS 441
Score = 85 (35.0 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 22/39 (56%), Positives = 23/39 (58%)
Query: 17 FCNSPFRTIHPVYCS---------IAP----NTDGIDPD 42
F NSPF IHPVYCS +AP NTDGIDPD
Sbjct: 195 FQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPD 233
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 251 (93.4 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 62/156 (39%), Positives = 87/156 (55%)
Query: 35 NTDGIDPD-----C----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 85
NTDGIDPD C YI +G+ LVAVKSGWD GIA RPS +I +RR++G++P +
Sbjct: 231 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPF-A 289
Query: 86 GVGIGREMSGRIFNVTVD-----------HLDTDKXXXXXXXXXXXXXXKMERVKIPIKI 134
G+ IG E SG I NVTV+ H+ T+ +E+V+ IKI
Sbjct: 290 GIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKI 349
Query: 135 SRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
S + HPD+ + A+P +RGI+ NV+ + +A
Sbjct: 350 SGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERA 385
Score = 134 (52.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA---------P---I 172
+E+V+ IKIS + HPD+ + A+P +RGI+ NV+ + +A P +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 173 CMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQL 208
C NV+L S W+C V G +V P PCP+L
Sbjct: 400 CFSNVTLTGTKRSPIWKCSDVVGAADKVNPTPCPEL 435
Score = 85 (35.0 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 19 NSPFRTIHPVYCS---------IAP----NTDGIDPD 42
NSPF T+HPVYCS +AP NTDGIDPD
Sbjct: 202 NSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPD 238
Score = 37 (18.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 87 VGIGREMSGRIFNVTVDHL 105
VG G+ ++ + FN +D +
Sbjct: 53 VGDGKTLNTKAFNSAIDRI 71
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 245 (91.3 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 59/150 (39%), Positives = 80/150 (53%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+PNTDG+DPD CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T +
Sbjct: 226 SPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTS 285
Query: 84 CSGVGIGREMSGRIFNVTVD--HL---------DTDKXXXXXXXXXXXXXXKMERVKIPI 132
SG+ IG EMSG + + + HL T K++ VK I
Sbjct: 286 SSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAI 345
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
+ + HPDE DPKA+P I I+F NV
Sbjct: 346 RFTGKYGEHPDEKYDPKALPAIEKITFENV 375
Score = 107 (42.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 35/101 (34%), Positives = 47/101 (46%)
Query: 124 KMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP------------ 171
K++ VK I+ + HPDE DPKA+P I I+F NV A
Sbjct: 337 KLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKN 396
Query: 172 ICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFP-LPCPQLQ 209
IC NV+L V S K W+C V G++ V P + C L+
Sbjct: 397 ICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLK 437
Score = 84 (34.6 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 24/55 (43%), Positives = 27/55 (49%)
Query: 1 VELMXXXXXXXXXXXAFCNSPFRTIHPVYC--------SI-----APNTDGIDPD 42
VELM F NSPF IHPVYC +I +PNTDG+DPD
Sbjct: 182 VELMNSTGLIISNLT-FLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPD 235
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 225 (84.3 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 56/150 (37%), Positives = 75/150 (50%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
APNTDGIDPD CYI +G+ +A+KSGWD GIA RPS+NI +R + +
Sbjct: 272 APNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVI 331
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKXXXXXXXXXXXXXXKMERVKIPI 132
+GV IG EMSG I NVT+++L T ++ V++ I
Sbjct: 332 SAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGI 391
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
I N H D+ D KA P + G SF +
Sbjct: 392 VIKTDYNEHADDNYDRKAYPILSGFSFAGI 421
Score = 62 (26.9 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 19 NSPFRTIHPVYC---SI-----------APNTDGIDPD 42
+SPF T+HP C +I APNTDGIDPD
Sbjct: 244 DSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPD 281
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 199 (75.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 49/160 (30%), Positives = 77/160 (48%)
Query: 33 APNTDGIDPD-C--------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
APNTDGIDPD C YI G+ +A+KSGWD G +PS NI +R + +
Sbjct: 250 APNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMV 309
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKXXXXXXXXXXXXXXKMERVKIPI 132
+G+ IG EMSG + N+TV+++ T ++ +++ I
Sbjct: 310 SAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGI 369
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAPI 172
I N HPD G +P+A P + I++ ++ + P+
Sbjct: 370 VIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGV-RVPV 408
Score = 95 (38.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP--------ICMKN 176
++ +++ I I N HPD G +P+A P + I++ ++ + P I +KN
Sbjct: 362 LDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGV-RVPVRIQGSKEIPVKN 420
Query: 177 VSLLVLAPSVKW------QCQFVSG-FNGQVFPLPCPQL 208
V+ ++ + + QC +V G G +FP PC L
Sbjct: 421 VTFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCDNL 459
Score = 62 (26.9 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 19 NSPFRTIHPVYC---SI-----------APNTDGIDPD 42
+SPF T+HP C +I APNTDGIDPD
Sbjct: 222 DSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPD 259
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 230 (86.0 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 58/173 (33%), Positives = 88/173 (50%)
Query: 17 FCNSPFRTIHPVYCSIA-PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMA 66
+CNS V + PNTDGI+PD CYI SG+ +AVKSGWD GI
Sbjct: 212 YCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFG 271
Query: 67 RPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---DTDKXXXXXXXXXXXXXX 123
P+ +++RR++ +P +GV +G EMSG I +V ++ + +T+
Sbjct: 272 MPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYV 331
Query: 124 K--------MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTT 168
K M+ +K +S HPDEG DPKA+P+I I++ ++ + N T
Sbjct: 332 KDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVT 384
Score = 134 (52.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 35/103 (33%), Positives = 53/103 (51%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTT---------KAP---I 172
M+ +K +S HPDEG DPKA+P+I I++ ++ + N T K P I
Sbjct: 341 MKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGI 400
Query: 173 CMKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLPCPQLQNKSS 213
C+ NV++ + A + K W C V+G +V P PC L K +
Sbjct: 401 CISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKKA 443
Score = 61 (26.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 19 NSPFRTIHPVYCS---------IAP----NTDGIDPD 42
+SP IHPVYC+ +AP NTDGI+PD
Sbjct: 202 DSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPD 238
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 190 (71.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 53/165 (32%), Positives = 84/165 (50%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
PNTDGI+PD CYI SG+ +AVKSGWD GI P+ + +RR++ +P
Sbjct: 252 PNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDS 311
Query: 85 SGVGIGREMSGRIFNVTVDHL---DTDKXXXXXXXXXXXXXXKMERVK----IPIKI--- 134
+ + +G EMSG I +V + + +++ K V+ + +K
Sbjct: 312 AVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFW 371
Query: 135 SRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVNTTKAPICMKNVS 178
GS G HPD+ DPKA+P I+ I++ ++ + N T P + +S
Sbjct: 372 MTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTM-PAQLAGIS 415
Score = 119 (46.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 36/102 (35%), Positives = 49/102 (48%)
Query: 137 GSNG-HPDEGRDPKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVL 182
GS G HPD+ DPKA+P I+ I++ ++ + N T IC+ NV++ L
Sbjct: 374 GSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSK 433
Query: 183 APS-VKWQCQFVSGFNGQVFPLPCPQLQNKSSSW---CSFLE 220
P V W C VSG+ V P PC L K C+F E
Sbjct: 434 KPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
Score = 62 (26.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 19/39 (48%), Positives = 21/39 (53%)
Query: 17 FCNSPFRTIHPVYCS---------IAP----NTDGIDPD 42
F NSP IHPVY S +AP NTDGI+PD
Sbjct: 222 FLNSPSWHIHPVYSSNIYIQGLTILAPVTVPNTDGINPD 260
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 187 (70.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 47/158 (29%), Positives = 78/158 (49%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+PNTDGI+PD CYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P
Sbjct: 228 SPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPY 287
Query: 84 CSGVGIGREMSGRIFNVTVDHL---DTDKXXXXXXXXXXXXXXK--------MERVKIPI 132
+ + +G EMSG I +V + + T+ K + +K
Sbjct: 288 SAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVF 347
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
++ H D DP A+P+I GI++ ++ + N + A
Sbjct: 348 WMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMA 385
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 141 HPDEGRDPKAIPKIRGISFVNVFSVNTTKA---------P---ICMKNVSLLVLAPSVK- 187
H D DP A+P+I GI++ ++ + N + A P IC+ N ++ + A K
Sbjct: 356 HADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKA 415
Query: 188 -WQCQFVSGFNGQVFPLPCPQLQNKSS 213
W C V G V P PC L + S
Sbjct: 416 IWMCSDVEGVTSGVDPKPCDLLDGQES 442
Score = 62 (26.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/55 (40%), Positives = 25/55 (45%)
Query: 1 VELMXXXXXXXXXXXAFCNSPFRTIHPVYCS---------IAP----NTDGIDPD 42
+ELM F +SP IHPVY S IAP NTDGI+PD
Sbjct: 184 IELMFSDTIQISNLT-FLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPD 237
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/174 (31%), Positives = 87/174 (50%)
Query: 17 FCNSPFRTIHPVYCSI-APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMA 66
+CN+ + I +PNTDGI+PD CY+ SG+ +AVKSGWD GI +
Sbjct: 223 YCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVG 282
Query: 67 RPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LDTDKXXXXXXXXXXXXXX 123
P+ +++RR++ +P +G+ +G EMSG I +V ++ L T
Sbjct: 283 MPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYV 342
Query: 124 K--------MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTK 169
K M+ +K +S N HP G DPKA+P I I++ ++ + N T+
Sbjct: 343 KDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQ 396
Score = 122 (48.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA---------P---I 172
M+ +K +S N HP G DPKA+P I I++ ++ + N T+ P I
Sbjct: 352 MKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKI 411
Query: 173 CMKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLPCPQLQNKSSSW-CSF 218
CM N+ + + A K W C +SG + +V P PC L K + C+F
Sbjct: 412 CMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSLLPEKGAPVDCAF 460
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 19 NSPFRTIHPVYCS---------IAP----NTDGIDPD 42
+SP IHPVYC+ +AP NTDGI+PD
Sbjct: 213 DSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 143 (55.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 44/154 (28%), Positives = 71/154 (46%)
Query: 27 PVYCSIAPNT-DGID-PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P +AP++ D + D I G+ V++KSGWD GI RP++ + +R + +PT
Sbjct: 224 PHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTG 283
Query: 85 SGVGIGREMSGRIFNVTVDHLD-----------TDKXXXXXXXXXXXXXXKMERVKIPIK 133
+G+ G EMSG + +VTV+ L+ T + + V I
Sbjct: 284 AGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAI- 342
Query: 134 ISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVN 166
++ G G HPD+ D A+P + I N V+
Sbjct: 343 VANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVD 376
Score = 95 (38.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 30/94 (31%), Positives = 44/94 (46%)
Query: 134 ISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSV------NTT---KAP---ICMKNVSLL 180
++ G G HPD+ D A+P + I N V N T ++P IC+ ++ L
Sbjct: 343 VANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQ 402
Query: 181 VLAPSVKWQCQFVSGFNGQVFPLPCPQLQNKSSS 214
+ W C VSGF+ V P PC +L + SS
Sbjct: 403 TRSEE-SWICSNVSGFSDDVSPEPCQELMSSPSS 435
Score = 57 (25.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 17 FCNSPFRTIHPVYCS 31
F N+P IHPVYCS
Sbjct: 194 FLNAPAINIHPVYCS 208
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 146 (56.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 50/155 (32%), Positives = 69/155 (44%)
Query: 33 APNTDGIDPD-----CY----IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+P T GI PD C I G +++KSGWD GIA +RP+ N+ +R V +
Sbjct: 226 SPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGAS 285
Query: 84 CSGVGIGREMSGRIFNVTVD--HLD---------TDKXXXXXXXXXXXXXXKMERVKIPI 132
S + G EMSG I +V VD H+ T K M R+ I
Sbjct: 286 GSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAI 345
Query: 133 KISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVN 166
++ GS G HPD+ D A+P + I N+ N
Sbjct: 346 -VANGSFGSHPDDKYDVNALPLVSHIRLSNISGEN 379
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 125 MERVKIPIKISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVNT---------TKAP--- 171
M R+ I ++ GS G HPD+ D A+P + I N+ N ++P
Sbjct: 338 MLRIGTAI-VANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSS 396
Query: 172 ICMKNVSLLVLA-PSVKWQCQFVSGFNGQVFPLPCPQLQNKSSSW 215
+ + NVSL + + SV WQC +V G + V P PCP+L+ + ++
Sbjct: 397 VTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEPCPELKRDADAY 441
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 129 (50.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 50/177 (28%), Positives = 75/177 (42%)
Query: 17 FCNSPFRTIHPVY---CSIAPNTDGIDPD-----CYIES----GNGLVAVKSGWDHDGIA 64
+C + + IH V C +P T GI PD C ES G +++KSG D G++
Sbjct: 209 YCRNLY--IHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLS 266
Query: 65 MARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD--HLDTDKXXXXXXXXXXXXX 122
ARP++N+ +R V + S + G EMSG I +V V H+
Sbjct: 267 YARPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGG 326
Query: 123 -------XKMERVKIPIK-ISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
+ V + ++ GS G HPD G D A P + I ++ N + A
Sbjct: 327 YIKEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTA 383
Score = 102 (41.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 134 ISRGSNG-HPDEGRDPKAIPKIRGISFVNVFSVN---------TTKAP---ICMKNVSLL 180
++ GS G HPD G D A P + I ++ N T ++P I + N+SL
Sbjct: 346 LANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLS 405
Query: 181 V---LAPSVKWQCQFVSGFNGQVFPLPCPQLQNKSS 213
+ +P+ WQC +V G + V P PC +L++ S
Sbjct: 406 IKNSASPADSWQCSYVDGSSEFVVPEPCLELKSFDS 441
Score = 51 (23.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 17 FCNSPFRTIHPVYC 30
F N+P TIH VYC
Sbjct: 197 FLNAPAYTIHSVYC 210
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 222 0.00096 112 3 11 22 0.37 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 614 (65 KB)
Total size of DFA: 191 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.36u 0.10s 16.46t Elapsed: 00:00:00
Total cpu time: 16.36u 0.10s 16.46t Elapsed: 00:00:00
Start: Sat May 11 02:42:31 2013 End: Sat May 11 02:42:31 2013