BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036161
(247 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/273 (61%), Positives = 186/273 (68%), Gaps = 47/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNSNNILI +NL FCN+PF TIHPVYCS APNTDGIDPD
Sbjct: 174 VELMNSNNILI-ANLTFCNAPFWTIHPVYCSNVVVKDMTILAPLKAPNTDGIDPDSSTNV 232
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI MARPSSNI VRRVSGTTPTCSGVGIG EMSG IF
Sbjct: 233 CIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGTTPTCSGVGIGSEMSGGIF 292
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+T++ L TD GRGG I NI I N+ MERVK+PI+ SRGSN HPDEG D
Sbjct: 293 NITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVKVPIRFSRGSNDHPDEGWD 352
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P ++GIS NV S N+TKAP ICMKNVSLL + S+ W C+FVSG
Sbjct: 353 PKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGVVSSLSWHCEFVSG 412
Query: 196 FNGQVFPLPCPQLQ-NKSSSWCSFLEFSGEDLN 227
F +VFP PCPQLQ N SSSWCS+ S +LN
Sbjct: 413 FADEVFPTPCPQLQSNISSSWCSYSWASSVNLN 445
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 182/262 (69%), Gaps = 47/262 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+ NS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 216 LEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNV 274
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGTTPTCSGVGIG EMSG I
Sbjct: 275 CIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGIS 334
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVT++ L TDKGRGG + NI I NI+MERVK+PI+ SRGSN HPD+G D
Sbjct: 335 NVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWD 394
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PKI+GI NV S+N+TKAP ICMKNV+LL LAP+ KW C+FVSG
Sbjct: 395 PKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSG 454
Query: 196 FNGQVFPLPCPQLQ-NKSSSWC 216
F VFP+ CPQ+Q N SSSWC
Sbjct: 455 FTDAVFPVSCPQMQSNVSSSWC 476
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 182/262 (69%), Gaps = 47/262 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+ NS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 216 LEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNV 274
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGTTPTCSGVGIG EMSG I
Sbjct: 275 CIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGIS 334
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVT++ L TDKGRGG + NI I NI+MERVK+PI+ SRGSN HPD+G D
Sbjct: 335 NVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWD 394
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PKI+GI NV S+N+TKAP ICMKNV+LL LAP+ KW C+FVSG
Sbjct: 395 PKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSG 454
Query: 196 FNGQVFPLPCPQLQ-NKSSSWC 216
F VFP+ CPQ+Q N SSSWC
Sbjct: 455 FTDAVFPVSCPQMQSNVSSSWC 476
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 177/264 (67%), Gaps = 47/264 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 217 VELMNSHNILI-SNLTFRNSPFWTIHPVYCSNVVVKDMTILAPLNAPNTDGIDPDSSTNV 275
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI ARPSS+I VRRVSGTTPTCSGVGIG EMSG IF
Sbjct: 276 CIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTPTCSGVGIGSEMSGGIF 335
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + L TD GRGG I NI + NI MERVKIPI+ SRGSN HPDE D
Sbjct: 336 NVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIPIRFSRGSNDHPDERWD 395
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P AIP ++G+S NV VN+TKAP ICMKNV+L+ LA S W C+FVSG
Sbjct: 396 PNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVTLVGLASSTSWHCEFVSG 455
Query: 196 FNGQVFPLPCPQLQ-NKSSSWCSF 218
F +VFP+PCPQLQ N SSSWCS+
Sbjct: 456 FANEVFPMPCPQLQNNDSSSWCSY 479
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/259 (59%), Positives = 178/259 (68%), Gaps = 46/259 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+ NS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 205 LEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNV 263
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGTTPTCSGVGIG EMSG I
Sbjct: 264 CIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGIS 323
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVT++ L TDKGRGG + NI I NI+MERVK+PI+ SRGSN HPD+ D
Sbjct: 324 NVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDXWD 383
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PKI+GI NV S+N+TKAP ICMKNV+LL LAP+ KW C+FVSG
Sbjct: 384 PKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSG 443
Query: 196 FNGQVFPLPCPQLQNKSSS 214
F VFP+ CPQ+Q+ ++
Sbjct: 444 FTDAVFPVSCPQMQSNEAT 462
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 177/263 (67%), Gaps = 47/263 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VEL+NS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 69 VELINSHNILI-SNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSTNV 127
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI +ARPSSNI +RRVSGTTPTCSGVGIG EMSG I
Sbjct: 128 CIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSEMSGGIS 187
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+T++ L+ +D+GRGG I N+ I N M RVK+ I+ SRGSN HPDE D
Sbjct: 188 NITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDHPDEQFD 247
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PK++GI N+ S+N+TKAP +CMKNV++L L PS KW C FVSG
Sbjct: 248 PKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSAKWHCAFVSG 307
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
F+ VFP PCPQLQN + SS CS
Sbjct: 308 FSTSVFPTPCPQLQNTTFSSLCS 330
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/254 (59%), Positives = 170/254 (66%), Gaps = 46/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS +ILI SNL F NSPF TIHP+YCS APNTDGIDPD
Sbjct: 140 VELMNSQDILI-SNLTFRNSPFWTIHPIYCSNLVVKDMTILAPLNAPNTDGIDPDSSTNV 198
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI MARPSSNI +RRVSGTTPTCSGVGIG EMSG IF
Sbjct: 199 CIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGIF 258
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVT++ L TDKGRGG I NI I +I MERVKIPI+ S GSN HPDE D
Sbjct: 259 NVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIPIRFSSGSNDHPDERWD 318
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P ++G+S N+ S N+TKAP ICMKN+SLL + S W+C+FVSG
Sbjct: 319 PKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISLLGVVSSPSWRCEFVSG 378
Query: 196 FNGQVFPLPCPQLQ 209
F VFP PCPQLQ
Sbjct: 379 FANDVFPTPCPQLQ 392
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 177/263 (67%), Gaps = 47/263 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VEL+NS+NILI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 209 VELINSHNILI-SNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSTNV 267
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI +ARPSSNI +RRVSGTTPTCSGVGIG EMSG I
Sbjct: 268 CIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSEMSGGIS 327
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+T++ L+ +D+GRGG I N+ I N M RVK+ I+ SRGSN HPDE D
Sbjct: 328 NITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDHPDEQFD 387
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PK++GI N+ S+N+TKAP +CMKNV++L L PS KW C FVSG
Sbjct: 388 PKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSAKWHCAFVSG 447
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
F+ VFP PCPQLQN + SS CS
Sbjct: 448 FSTSVFPTPCPQLQNTTFSSLCS 470
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/263 (55%), Positives = 181/263 (68%), Gaps = 47/263 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+EL++S+N+LI SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 214 LELISSDNVLI-SNLTFRNSPFWTIHPVYCSNVVVKGMTILAPLNAPNTDGIDPDSSTNV 272
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YIESG+ LVA+KSGWDH GI MA PS+NI VRR+SGTTPTCSGVGIG EMSG I
Sbjct: 273 CIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCSGVGIGSEMSGGIS 332
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+T+++L +DKGRGG I N+ I +I+MERVKIPI+ SRGSN HPD+G D
Sbjct: 333 NITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRFSRGSNDHPDDGWD 392
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPI------------CMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P+ + I NV SVN+TKAP+ C KN++L +A S +W+C++VSG
Sbjct: 393 PKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGVALSARWRCEYVSG 452
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
F +VFP+PCP+L+N S SSWCS
Sbjct: 453 FATEVFPVPCPELRNNSYSSWCS 475
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/261 (54%), Positives = 174/261 (66%), Gaps = 46/261 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+ELMNS N+L+ SNL F NSPF TIHPVYCS APNTDGIDPD
Sbjct: 215 LELMNSENVLV-SNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNV 273
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YIESG+ LVA+KSGWD GIA+A+PS+NI V RVSGTTPTCSGVGIG EMSG I
Sbjct: 274 CIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGSEMSGGIS 333
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+T+++L +D GRGG I+N+ I NI+MERVKIPI+ SRGSN HPD+G D
Sbjct: 334 NITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDHPDDGWD 393
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPI------------CMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P+ + I NV SVN+TKAP+ C KN++ L +A S W C++V+G
Sbjct: 394 PKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGVALSATWHCEYVAG 453
Query: 196 FNGQVFPLPCPQLQNKSSSWC 216
F VFPLPCP+LQN +S C
Sbjct: 454 FTNGVFPLPCPELQNNGTSSC 474
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 168/259 (64%), Gaps = 46/259 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL NS+NILI SNL NSPF TIHPVYCS APNTDGIDPD
Sbjct: 211 IELKNSHNILI-SNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNV 269
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD G+A+ARPSSNI +RR+SGTT TCSGVGIG EMSG IF
Sbjct: 270 CIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIF 329
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+TV+ + TDKGRGG I NI N+ +E+VK+PI+ S GSN H D+ D
Sbjct: 330 NITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWD 389
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P+++GI NV S+N+ KAP +C++NV+LL L + KW+C+ VSG
Sbjct: 390 PKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWKCKDVSG 449
Query: 196 FNGQVFPLPCPQLQNKSSS 214
+ VFPL CPQL K S
Sbjct: 450 YASDVFPLSCPQLLQKKGS 468
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 171/265 (64%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL N +NILI SNL NSPF TIHPVYCS APNTDGIDPD
Sbjct: 211 IELKNCHNILI-SNLTLLNSPFWTIHPVYCSNVVIRNMTILAPINAPNTDGIDPDSSTNV 269
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ L+AVKSGWD G+A+ARPSSNI +RR+SGTT TCSGVGIG EMSG IF
Sbjct: 270 CIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIF 329
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+TV+ + TDKGRGG I NI N+ +E+VK+PI+ S GSN H D+ D
Sbjct: 330 NITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWD 389
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P+++GI NV S+N+ KAP +C++NV+LL L + KW+C+ VSG
Sbjct: 390 PKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPQTEKWKCKDVSG 449
Query: 196 FNGQVFPLPCPQLQNK--SSSWCSF 218
+ VFPL CPQL K S S CS+
Sbjct: 450 YASDVFPLSCPQLLQKKGSISQCSY 474
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 160/265 (60%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+NS N+LI SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 218 IELVNSTNVLI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDPDSSSEV 276
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 277 CIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGIS 336
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V L TD GRGG I NI I N+ ME+VK+PI+ SRGS+ H D+ D
Sbjct: 337 NVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDHSDDKYD 396
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I GI V++ V+ +AP IC +NVSL + V+WQC+ V G
Sbjct: 397 RTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVRWQCESVYG 456
Query: 196 FNGQVFPLPCPQLQN--KSSSWCSF 218
+VFP PC +L+N SSSWC
Sbjct: 457 EAHEVFPAPCEELRNNGSSSSWCGL 481
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/265 (49%), Positives = 160/265 (60%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+NS N+LI SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 33 IELVNSTNVLI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDPDSSSEV 91
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 92 CIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGIS 151
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V L TD GRGG I NI I N+ ME+VK+PI+ SRGS+ H D+ D
Sbjct: 152 NVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDHSDDKYD 211
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I GI V++ V+ +AP IC +NVSL + V+WQC+ V G
Sbjct: 212 RTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVRWQCESVYG 271
Query: 196 FNGQVFPLPCPQLQN--KSSSWCSF 218
+VFP PC +L+N SSSWC
Sbjct: 272 EAHEVFPAPCEELRNNGSSSSWCGL 296
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 158/265 (59%), Gaps = 47/265 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+NS NILI S++ NSPF T+HPVYCS APNTDGIDPD
Sbjct: 234 IELVNSTNILI-SSITLRNSPFWTVHPVYCSNVVMKDLTILAPLNAPNTDGIDPDSSSEV 292
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PS+NI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 293 CIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGIS 352
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V L TD GRGG I NI I N+ ME+VK+PI+ SRG++ H D+ D
Sbjct: 353 NVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRFSRGADDHSDDNYD 412
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P+I + +V V+ +AP IC +N SL + +W C+ V G
Sbjct: 413 RTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRGIRRQDRWHCESVYG 472
Query: 196 FNGQVFPLPCPQL-QNKSSSWCSFL 219
+VFP PC + +N SSSWC F+
Sbjct: 473 EAHEVFPAPCEEFRKNGSSSWCGFI 497
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 156/262 (59%), Gaps = 47/262 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL++S NI+I SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 219 IELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEV 277
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 278 CIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGIS 337
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + L TD GRGG I NI I N++ME+VK+PI+ SRG++ H D+ D
Sbjct: 338 NVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYD 397
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+PKI + +V V+ +AP IC +NVSL V+ +W C+ V G
Sbjct: 398 RSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWHCESVYG 457
Query: 196 FNGQVFPLPCPQL-QNKSSSWC 216
V P PC + +N SSSWC
Sbjct: 458 EAHDVLPAPCEEFRRNGSSSWC 479
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 156/262 (59%), Gaps = 47/262 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL++S NI+I SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 219 IELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEV 277
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 278 CIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGIS 337
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + L TD GRGG I NI I N++ME+VK+PI+ SRG++ H D+ D
Sbjct: 338 NVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYD 397
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+PKI + +V V+ +AP IC +NVSL V+ +W C+ V G
Sbjct: 398 RSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWHCESVYG 457
Query: 196 FNGQVFPLPCPQL-QNKSSSWC 216
V P PC + +N SSSWC
Sbjct: 458 EAHDVLPAPCEEFRRNGSSSWC 479
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 156/262 (59%), Gaps = 47/262 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL++S NI+I SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 219 IELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEV 277
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 278 CIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSGGIS 337
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + L TD GRGG I NI I N++ME+VK+PI+ SRG++ H D+ D
Sbjct: 338 NVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHSDDKYD 397
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+PKI + +V V+ +AP IC +NVSL V+ +W C+ V G
Sbjct: 398 RSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWHCESVYG 457
Query: 196 FNGQVFPLPCPQL-QNKSSSWC 216
V P PC + +N SSSWC
Sbjct: 458 EAHDVLPAPCEEFRRNGSSSWC 479
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 156/267 (58%), Gaps = 49/267 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+NS N+LI S++ NSPF T+HPVYCS APNTDGIDPD
Sbjct: 228 IELVNSTNVLI-SSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAPNTDGIDPDSSSEV 286
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVAVKSGWD GI+ +PS+NI ++RVSGTTPTCSGVG G EMSG I
Sbjct: 287 CIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGIS 346
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V L TD GRGG I NI I ++ ME+VK+PI+ SRG++ HPD+ D
Sbjct: 347 NVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVKVPIRFSRGADDHPDDRYD 406
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL--LVLAPSVKWQCQFV 193
P A+P+I + +V V+ +AP IC +N S + +W C+ V
Sbjct: 407 PAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGIRRQQDSRWHCESV 466
Query: 194 SGFNGQVFPLPCPQL-QNKSSSWCSFL 219
G VFP PC + ++ SSSWC L
Sbjct: 467 YGEAHDVFPAPCEEFRRDGSSSWCGLL 493
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 153/241 (63%), Gaps = 25/241 (10%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIAPNTDGIDPDCYIESGNGLVAVKSGWDHDG 62
L+NS ++I S+L S + + +T+ DCYIESG+ LVAVKSGWD G
Sbjct: 221 LLNSRTLIISSSLTSLCSILLSGQSILFIADSSTNVCIEDCYIESGDDLVAVKSGWDQYG 280
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------HLDTDKGR 111
+A+ARPSSNI +RR+SGTT TCSGVGIG EMSG IFN+TV+ + TDKGR
Sbjct: 281 MAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGR 340
Query: 112 GGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP 171
GG I NI N+ +E+VK+PI+ S GSN H D+ DPKA+P+++GI NV S+N+ KAP
Sbjct: 341 GGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAP 400
Query: 172 ------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNKSSS--WCS 217
+C++NV+LL L + KW+C+ VSG+ VFPL CPQL K S CS
Sbjct: 401 MLLGVEGTSFQDVCLRNVTLLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQKKGSIAQCS 460
Query: 218 F 218
+
Sbjct: 461 Y 461
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 155/268 (57%), Gaps = 51/268 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+NS N++I SN+ NSPF T+HPVYC APNTDGIDPD
Sbjct: 218 IELVNSTNVMI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAPNTDGIDPDSSSDV 276
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYIESG+ LVA+KSGWD GI++ +PS+NI ++RVSGTTPTCSGVGIG EMSG +
Sbjct: 277 CIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGTTPTCSGVGIGSEMSGGVS 336
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L TD GRGG + N+ + N+ MERVK+PI+ SRGS+ H D+ D
Sbjct: 337 GVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVKVPIRFSRGSDDHSDDKYD 396
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPS----VKWQCQ 191
A+P I + V++ V+ +AP IC +NVSL + WQC+
Sbjct: 397 RTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNVSLRLREEVRRRHAGWQCE 456
Query: 192 FVSGFNGQVFPLPCPQLQ-NKSSSWCSF 218
V G VFP C +L+ N SSSWC
Sbjct: 457 SVYGEAHGVFPEACEELRHNGSSSWCGL 484
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 137/256 (53%), Gaps = 47/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS +LI SNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 182 VELMNSTRVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T T +G+ IG EMSG +
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVS 300
Query: 99 NV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V T + T GRGG + NI + N+ + V I I+ + HPD+ D
Sbjct: 301 DVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V N TKA IC+ N++L V + + W C + G
Sbjct: 361 PNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLNV-SSNYPWNCSNIRG 419
Query: 196 FNGQVFPLPCPQLQNK 211
++ VFP C L+ +
Sbjct: 420 YSDMVFPEACEPLKER 435
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 139/254 (54%), Gaps = 48/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS + +ISNL F NSPF TIHP+YCS +PNTDGIDPD
Sbjct: 21 VELMNSTGV-VISNLTFLNSPFWTIHPIYCSHVIVQNVTIRAPLDSPNTDGIDPDSSDDV 79
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ ++A+KSGWD GI+ RPS NI +RR+ G T + SG+ IG EMSG +
Sbjct: 80 CIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIGETHS-SGIAIGSEMSGGVS 138
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG + NI I N+ + VK+ I+ + HPDE D
Sbjct: 139 DVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVKVAIRFTGRYGEHPDESYD 198
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+PKI I+F ++ N T A IC+ N++L V + S W C V G
Sbjct: 199 PKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNITLSVNSIS-PWNCSNVQG 257
Query: 196 FNGQVFPLPCPQLQ 209
F+ VFP C L+
Sbjct: 258 FSSLVFPQTCELLE 271
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 145/264 (54%), Gaps = 49/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS +I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 212 VEFVNSQDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNV 270
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPS I +RR++G++P +G+ IG E SG +
Sbjct: 271 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTGSSP-FAGIAIGSETSGGVE 329
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +H++ T+ GRGG I+NI + ++ +E + IKI+ GHPDE +
Sbjct: 330 NVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFN 389
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVL--APSVKWQCQFV 193
P A+P ++GI+ NV+ V +A +C+ N++ + S W+C V
Sbjct: 390 PNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDV 449
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCS 217
GF QV P PC QL ++ C+
Sbjct: 450 FGFAHQVSPWPCSQLSSQEPGSCA 473
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 145/264 (54%), Gaps = 49/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS +I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 180 VEFVNSQDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNV 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPS I +RRV+G++P +G+ IG E SG +
Sbjct: 239 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTGSSP-FAGIAIGSETSGGVE 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +H++ T+ GRGG I+NI + ++ +E + IKI+ GHPDE +
Sbjct: 298 NVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFN 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLA--PSVKWQCQFV 193
P A+P ++GI+ NV+ V +A +C+ +++ + S W+C V
Sbjct: 358 PNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDV 417
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCS 217
GF QV P PC QL ++ C+
Sbjct: 418 FGFAHQVSPWPCSQLSSQEPGSCA 441
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 146/264 (55%), Gaps = 49/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS +I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 182 VEFVNSRDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P +G+ IG E SG +
Sbjct: 241 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGIAIGSETSGGVE 299
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +H++ T+ GRGG I+NI + ++ ME + I+IS HPD+ D
Sbjct: 300 NVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPDDKFD 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLL-VLAPSV-KWQCQFV 193
A+P ++G++ NV+ + +A IC+ +++L V P W+C V
Sbjct: 360 ANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPWKCSDV 419
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCS 217
SGF QV P PC +L + C+
Sbjct: 420 SGFAHQVSPWPCSELSSNQQGSCA 443
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 142/253 (56%), Gaps = 47/253 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPDC---- 43
+E NS NIL+ S++ NSPF T+HPVYCS +AP NTDGIDPD
Sbjct: 185 IEFNNSTNILV-SHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNV 243
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPS +I +RR++G++P +G+ IG E SG I
Sbjct: 244 CIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP-FAGIAIGSETSGGIQ 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVTV+ H+ T+ GRGG+I+ I I + +E+V+ IKIS + HPD+ +
Sbjct: 303 NVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFN 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P +RGI+ NV+ + +A +C NV+L S W+C V G
Sbjct: 363 TSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKRSPIWKCSDVVG 422
Query: 196 FNGQVFPLPCPQL 208
+V P PCP+L
Sbjct: 423 AADKVNPTPCPEL 435
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 137/256 (53%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VEL++S +I ISN+ F NSPF TIHPVYCS APN DGIDPD
Sbjct: 201 VELIDSRHI-TISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPNIDGIDPDSSSNV 259
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+++KSGWD GI PS+N+ + VSG +PT +G+ G EMSG I
Sbjct: 260 CIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEMSGGIS 319
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG I NI I ++++E V + + GHPD+G D
Sbjct: 320 DVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHPDDGYD 379
Query: 148 PKAIPKIRGISFVNVFS---------VNTTKAP---ICMKNVSLLVLAPSVKWQCQFVSG 195
P+A+P IRGIS +V +AP +C NVSL V A + W C G
Sbjct: 380 PRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAGA--WNCSNTYG 437
Query: 196 FNGQVFPLPCPQLQNK 211
F+ +V P PC +L K
Sbjct: 438 FSERVVPSPCLELDRK 453
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 142/260 (54%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E +S I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 180 IEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNV 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P +G+ IG E SG I
Sbjct: 239 CIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETSGGIK 297
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ +H + T+ GRGG I+NI I ++ ++ K IKI+ + HPDE +
Sbjct: 298 NIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYN 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK-WQCQFVS 194
P A+P ++GI NV+ VN A IC+ ++L S K W+C VS
Sbjct: 358 PNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVS 417
Query: 195 GFNGQVFPLPCPQLQNKSSS 214
G + +V P PC +L+ S
Sbjct: 418 GTSLKVSPWPCSELRTTGGS 437
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 140/255 (54%), Gaps = 49/255 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS NI IISN+ F NSPF IHPVYC +PNTDG+DPD
Sbjct: 180 VEFVNSYNI-IISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNV 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA R S +I +RR+SG++P +GV +G E SG +
Sbjct: 239 CIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSP-FAGVAVGSEASGGVA 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I+NI + N+ ME + +KI+ + HPD+ D
Sbjct: 298 NVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL--LVLAPSVKWQCQFV 193
P A+P ++ I+ N++ VN +A IC+ N++L SV W C +V
Sbjct: 358 PNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYV 417
Query: 194 SGFNGQVFPLPCPQL 208
SG V P PC +L
Sbjct: 418 SGAASLVSPWPCSEL 432
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 136/253 (53%), Gaps = 48/253 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VEL++S +I ISN+ F NSPF TIHPVYCS APN DGIDPD
Sbjct: 144 VELIDSRHI-TISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPNIDGIDPDSSSNV 202
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+++KSGWD GI PS+N+ + VSG +PT +G+ G EMSG I
Sbjct: 203 CIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEMSGGIS 262
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG I NI I ++++E V + + GHPD+G D
Sbjct: 263 DVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHPDDGYD 322
Query: 148 PKAIPKIRGISFVNVFS---------VNTTKAP---ICMKNVSLLVLAPSVKWQCQFVSG 195
P+A+P IRGIS +V +AP +C NVSL V A + W C G
Sbjct: 323 PRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAGA--WNCSNTYG 380
Query: 196 FNGQVFPLPCPQL 208
F+ +V P PC +L
Sbjct: 381 FSERVVPSPCLEL 393
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 144/264 (54%), Gaps = 49/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E +S I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 180 IEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNV 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P +G+ IG E SG I
Sbjct: 239 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETSGGIK 297
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ +H + T+ GRGG I+NI I ++ ++ K IKI+ + HPDE +
Sbjct: 298 NIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPDENYN 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK-WQCQFVS 194
P A+P ++GI NV+ VN A IC+ ++L S K W+C V
Sbjct: 358 PNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVI 417
Query: 195 GFNGQVFPLPCPQLQNKSSSW-CS 217
G + +V P PC +L+ S+ CS
Sbjct: 418 GTSLKVSPWPCSELRTTGGSYSCS 441
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+S+N I+SNL F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 187 LELMDSSNA-IVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNV 245
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GIA RPSS+I +RR++G++P +G +G E SG +
Sbjct: 246 CIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSETSGGVE 304
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I NI + ++ ++ V+ ++I+ GHPDE +
Sbjct: 305 NVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHPDERYN 364
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + + NV N +A IC+ N+ L AP W+CQ VSG
Sbjct: 365 HNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWKCQAVSG 424
Query: 196 FNGQVFPLPCPQLQNKSS-SWCS 217
V P PC +L + S S+C+
Sbjct: 425 GALDVQPSPCTELTSMSGMSFCT 447
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+S+N I+SNL F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 187 LELMDSSNA-IVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNV 245
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GIA RPSS+I +RR++G++P +G +G E SG +
Sbjct: 246 CIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSETSGGVE 304
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I NI + ++ ++ V+ ++I+ GHPDE +
Sbjct: 305 NVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHPDERYN 364
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + + NV N +A IC+ N+ L AP W+CQ VSG
Sbjct: 365 HNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWKCQAVSG 424
Query: 196 FNGQVFPLPCPQLQNKSS-SWCS 217
V P PC +L + S S+C+
Sbjct: 425 GALDVQPSPCTELTSMSGMSFCT 447
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 147/263 (55%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+S+++ I+SNL F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 185 LELMDSSDV-IVSNLVFRDSPFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNV 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ LVA+KSGWD GIA RPSS+I VRR++G++P +G +G E SG +
Sbjct: 244 CIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSETSGGVE 302
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I N+ + ++ ++ V+ ++I+ HPDE +
Sbjct: 303 NVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIAGDVGDHPDEHYN 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+PK+ ++ NV N +A IC+ N+ L P W+C+ VSG
Sbjct: 363 HNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKLHGSVPVRPWKCESVSG 422
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
+ P PC +L + S +S+C+
Sbjct: 423 GALDLQPSPCTELTSTSGTSFCT 445
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 135/257 (52%), Gaps = 49/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS LIISNL F NSPF IHPVYC +PNTDG+DPD
Sbjct: 181 VELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 239
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T + SG+ IG EMSG +
Sbjct: 240 CIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 299
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + L T GRGG + N+ I N+K++ VK I+ + HPDE D
Sbjct: 300 EIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYD 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I+F NV A IC NV+L V S K W+C V
Sbjct: 360 PKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNV 419
Query: 194 SGFNGQVFP-LPCPQLQ 209
G++ V P + C L+
Sbjct: 420 RGYSQWVSPEITCDSLK 436
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 135/257 (52%), Gaps = 49/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS LIISNL F NSPF IHPVYC +PNTDG+DPD
Sbjct: 182 VELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T + SG+ IG EMSG +
Sbjct: 241 CIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + L T GRGG + N+ I N+K++ VK I+ + HPDE D
Sbjct: 301 EIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I+F NV A IC NV+L V S K W+C V
Sbjct: 361 PKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNV 420
Query: 194 SGFNGQVFP-LPCPQLQ 209
G++ V P + C L+
Sbjct: 421 RGYSQWVSPEITCDSLK 437
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS+ I +ISNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 192 VELMNSSGI-VISNLTFINSPFWTIHPVYCSKVIVQNVTIRAPLDSPNTDGIDPDSSDDV 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I +G+ L+A+KSGWD GI RP NI +RR+ G T + +G+ IG EMSG +
Sbjct: 251 CIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSEMSGGVS 310
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V ++ + T GRGG + NI + N+ + V I I+ + HPDE D
Sbjct: 311 EVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEHPDEHYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P I I+ +V N A IC+ N+SL V + W C ++ G
Sbjct: 371 PKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNICLSNISLNVTS-KFPWNCSYIQG 429
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C L+
Sbjct: 430 YSESVSPEICEPLR 443
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 140/255 (54%), Gaps = 48/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E +S I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 180 IEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNV 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P +G+ IG E SG I
Sbjct: 239 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSETSGGIK 297
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ +H + T+ GRGG I+NI I ++ ++ K IKI+ + HPDE +
Sbjct: 298 NIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPDENYN 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK-WQCQFVS 194
P A+P ++GI NV+ VN A IC+ ++L S K W+C V
Sbjct: 358 PNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVI 417
Query: 195 GFNGQVFPLPCPQLQ 209
G + +V P PC +L+
Sbjct: 418 GTSLKVSPWPCSELR 432
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 135/256 (52%), Gaps = 47/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VE +NS + +ISN+ F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 182 VEFINSTGV-VISNVTFLNSPFWTIHPVYCSQVIIQNVTILAPLDSPNTDGIDPDSSNDV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GI+ ARPS+NI +RR+ G T + +G+ IG EMSG +
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSEMSGGVS 300
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG + NI I ++ + VKI I+ + HPDE D
Sbjct: 301 EVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTGQYGEHPDEFYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V N A IC+ N++L V + S W C ++ G
Sbjct: 361 PTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNITLNVTSES-PWNCSYIHG 419
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C L +
Sbjct: 420 YSDLVSPEACEPLGER 435
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 134/254 (52%), Gaps = 48/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMN+ + +ISNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 175 VELMNTTGV-VISNLTFLNSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDV 233
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ ++A+KSGWD G + ARPS NI +R + G T T +G+ IG EMSG +
Sbjct: 234 CIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQT-TSAGIAIGSEMSGGVS 292
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V ++L T GRGG + NI I N+ + VK I+ + HPDE D
Sbjct: 293 EVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDHPDESYD 352
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P I I+ +V N A IC+ N++L V + S W C ++ G
Sbjct: 353 PKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNINLSVTSKS-PWNCSYIQG 411
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C L+
Sbjct: 412 YSEAVSPEICEPLR 425
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 135/257 (52%), Gaps = 49/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS LIISNL F NSPF IHPVYC +PNTDG+DPD
Sbjct: 182 VELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T + SG+ IG EMSG +
Sbjct: 241 CIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + L T GRGG + N+ I N+K++ VK I+ + HPDE D
Sbjct: 301 EIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKFD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I+F NV A IC NV+L V S K W+C V
Sbjct: 361 PKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSPWECSNV 420
Query: 194 SGFNGQVFP-LPCPQLQ 209
G++ V P + C L+
Sbjct: 421 RGYSQWVSPEITCDSLK 437
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 141/257 (54%), Gaps = 47/257 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPDC---- 43
+E NS NI ++S++ NS F T+HPVYCS +AP NTDGIDPD
Sbjct: 185 IEFKNSTNI-VVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSFNTDGIDPDSSSNV 243
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA PS +I +RR++G++P +G+ IG E SG I
Sbjct: 244 CIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSP-FAGIAIGSETSGGIQ 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVTV+ H+ T+ GRGG+I+ I I + +E+V+ IKIS + HPD+ +
Sbjct: 303 NVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFN 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P +RGI+ NV+ + +A +C NV+L + W+C V G
Sbjct: 363 TSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKSTPIWKCSDVVG 422
Query: 196 FNGQVFPLPCPQLQNKS 212
+V P PCP+L +
Sbjct: 423 AASKVNPTPCPELTTTT 439
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 132/256 (51%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS +LI SNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 182 VELMNSTGVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T T SG+ IG EMSG +
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQT-SGIAIGSEMSGGVS 299
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + + T GRGG + NI + N+ + V I I + HPD+ D
Sbjct: 300 EVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEHPDDAYD 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I ++ +V N A IC+ N+ +L + + W C +V G
Sbjct: 360 PNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNI-ILNVTSNYPWNCSYVKG 418
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C L+ +
Sbjct: 419 YSDLVQPEACEPLKER 434
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ + +ISNL F N+PF IHPVYCS +PNTDGIDPD
Sbjct: 212 LELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNV 270
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +V +KSGWD GI+ A PSSNI++R ++G T +G+ G EMSG I
Sbjct: 271 CIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGIS 330
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRGG ++NI I ++ M+ V I I+I+ HPD+ D
Sbjct: 331 DVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYD 390
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV VN A IC+ NVSL + W C + G
Sbjct: 391 KNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSAD-PWNCSLIEG 449
Query: 196 FNGQVFPLPCPQLQ 209
F+ V P C QL+
Sbjct: 450 FSNSVAPEICEQLR 463
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ + +ISNL F N+PF IHPVYCS +PNTDGIDPD
Sbjct: 152 LELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNV 210
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +V +KSGWD GI+ A PSSNI++R ++G T +G+ G EMSG I
Sbjct: 211 CIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGIS 270
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRGG ++NI I ++ M+ V I I+I+ HPD+ D
Sbjct: 271 DVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYD 330
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV VN A IC+ NVSL + W C + G
Sbjct: 331 KNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSAD-PWNCSLIEG 389
Query: 196 FNGQVFPLPCPQLQ 209
F+ V P C QL+
Sbjct: 390 FSNSVAPEICEQLR 403
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 140/257 (54%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS +I IISN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 184 VEFVNSKDI-IISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDSSSNV 242
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA R SSNI +RRVSG++P +G+ +G E SG +
Sbjct: 243 CIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSP-FAGIAVGSETSGGVE 301
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ +H++ T+ GRGG I+NI + N+ +E + IKIS H D+ D
Sbjct: 302 NILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKYD 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLL----VLAPSVKWQCQ 191
A+P ++GI+ NV+ V +A IC+ +++L + + WQC
Sbjct: 362 SNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPSWQCS 421
Query: 192 FVSGFNGQVFPLPCPQL 208
VSG QV P PC +L
Sbjct: 422 DVSGVALQVSPWPCSEL 438
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELM S + +ISNL F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 192 VELMYSTRV-VISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNV 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ A PSSNI++R ++G T +G+ G EMSG I
Sbjct: 251 CIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGIS 310
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG ++N+ + ++ + V I I+I+ HPD+G D
Sbjct: 311 DVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDGYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C V G
Sbjct: 371 RNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTD-PWNCSLVEG 429
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 430 YSSSVSPEVCEQLR 443
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 132/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ + +ISNL F N+PF IHPVYCS +PNTDGIDPD
Sbjct: 212 LELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNV 270
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +V +KSGWD GI+ A PSSNI++R ++G T +G+ G EMSG I
Sbjct: 271 CIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGIS 330
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRGG ++NI I ++ M+ V I I+I+ HPD+ D
Sbjct: 331 DVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYD 390
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
+P I I+ NV VN A IC+ NVSL + W C V G
Sbjct: 391 KNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSAD-PWNCSLVKG 449
Query: 196 FNGQVFPLPCPQLQ 209
F+ V P C QL+
Sbjct: 450 FSNSVAPEICEQLR 463
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 145/263 (55%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+S++I I+SN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 184 LELMSSSHI-IVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNI 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +A+KSGWD GIA RPSS+I VRR++G++P +G +G E SG +
Sbjct: 243 CIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSETSGGVE 301
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I N+ + ++ ++ V+ ++I HPDE +
Sbjct: 302 NVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHPDERYN 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + ++ NV N +A IC+ NV L AP W+C+ VSG
Sbjct: 362 RSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKCEAVSG 421
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
V P PC +L + S +S+C+
Sbjct: 422 GALDVQPSPCTELTSTSGTSFCT 444
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 133/256 (51%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VE MN+ + +ISNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 182 VEFMNTTGV-VISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CY+ +G+ ++A+KSGWD G++ RPS NI +RR+ G T T +G+ IG EMSG
Sbjct: 241 CVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQT-TSAGIAIGSEMSGGVS 299
Query: 96 -------RIFNVTVD-HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
R +N T + T GRGG + NI I N+ + VK I + HPDE D
Sbjct: 300 EVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEHPDEYYD 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V N A IC+ N++L V + S W C ++ G
Sbjct: 360 PTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVTSKS-PWNCSYIQG 418
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C L+ +
Sbjct: 419 YSDTVSPEICEPLRER 434
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 132/256 (51%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELMNS +LI SNL F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 182 VELMNSTGVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T T SG+ IG EMSG +
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQT-SGIAIGSEMSGGVS 299
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + + T GRGG + NI + N+ + V I I + HPD+ +
Sbjct: 300 EVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYGEHPDDAYN 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V N A IC+ N+ +L + + W C +V G
Sbjct: 360 PNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNI-ILNVTSNYPWNCSYVKG 418
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C L+ +
Sbjct: 419 YSDLVQPEACEPLKER 434
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 135/256 (52%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS +LI SN+ F NSPF TIHPVYCS +PNTDGI+PD
Sbjct: 190 VELMNSTGVLI-SNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNV 248
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+++KSGWD GI+ RPS+NI +RR+ G T T +G+ IG EMSG +
Sbjct: 249 CIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSEMSGGVS 307
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + + T GRGG + N+ I N+ + V I I+ + HPD+ D
Sbjct: 308 EVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYD 367
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V V A IC+ N++L V + + W C ++ G
Sbjct: 368 PDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNV-SSKLPWNCSYIKG 426
Query: 196 FNGQVFPLPCPQLQNK 211
F+ V P C L+ +
Sbjct: 427 FSDLVSPEACEPLKER 442
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 138/264 (52%), Gaps = 48/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E M+S+ I I SN+ NSPF IHPVYC +PNTDG+DPD
Sbjct: 182 LEFMHSSGIHI-SNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P SG+ IG E SG +
Sbjct: 241 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEASGGVS 299
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ H+ T+ GRGG I NI + N++M V+ ++I+ HPDE
Sbjct: 300 DVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFS 359
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + G+S NV+ VN + IC+ NV L + W+C+ V G
Sbjct: 360 QLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWKCRDVHG 419
Query: 196 FNGQVFPLPCPQLQNK-SSSWCSF 218
V P PC +L SS +CS+
Sbjct: 420 AALGVQPGPCAELTTSLSSGFCSY 443
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 132/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELM S + +ISNL F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 199 VELMYSTRV-VISNLTFINSPFWNIHPVYCSQVLAQHLTILAPISSPNTDGIDPDSSTNV 257
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +V +KSGWD GI+ A PSSNI++R ++G T +G+ G EMSG I
Sbjct: 258 CIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGIS 317
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG ++N+ + ++ + V I I+I+ HPD+ +
Sbjct: 318 DVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDRYN 377
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C V G
Sbjct: 378 KSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSLSVRSTD-PWNCSLVEG 436
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 437 YSNSVSPEVCEQLR 450
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 137/264 (51%), Gaps = 48/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E M+S+ I I SN+ NSPF IHPVYC +PNTDG+DPD
Sbjct: 182 LEFMHSSGIHI-SNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P SG+ IG E SG +
Sbjct: 241 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEASGGVS 299
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ H+ T+ GRGG I NI + N++M V+ ++I+ HPDE
Sbjct: 300 NVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFS 359
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + +S NV+ VN + IC+ NV L + W+C+ V G
Sbjct: 360 QLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWKCRDVHG 419
Query: 196 FNGQVFPLPCPQLQNK-SSSWCSF 218
V P PC +L SS +CS+
Sbjct: 420 AALGVQPGPCAELTTSLSSGFCSY 443
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELM S +I IISNL F NSP +HPVY S +PNTDGIDPD
Sbjct: 185 VELMYSKDI-IISNLTFLNSPAWNLHPVYSSNILIQYVTILAPLDSPNTDGIDPDSCSYV 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ +VA+KSGWD GI+ PS +I +RR+ G +PT + + +G EMSG I
Sbjct: 244 RIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISPTSAIIALGSEMSGGIQ 303
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I + + M +K ++ HPD D
Sbjct: 304 DVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGSHPDNKYD 363
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+P + IS+ N+ + N + A IC+ NV++ + A S K W C ++
Sbjct: 364 PNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTITMAAKSKKYPWNCTYI 423
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V+P PC L+ + + +F
Sbjct: 424 HGLSNAVYPQPCSLLEERPAEGDAF 448
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 139/261 (53%), Gaps = 49/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS I IISN+ F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 181 VEFLNSRGI-IISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSNV 239
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P +G+ +G E SG +
Sbjct: 240 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSP-FAGIAVGSETSGGVE 298
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + H+ T+ GRGG I NI ++ M+ + IKI+ HPD+ +
Sbjct: 299 HVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYN 358
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLL-VLAP-SVKWQCQFV 193
P A+P ++GI F V+ N + IC+ N++L V P S W+C V
Sbjct: 359 PNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDV 418
Query: 194 SGFNGQVFPLPCPQLQNKSSS 214
SG +V P PC +L +
Sbjct: 419 SGAALEVSPFPCSELATTHQT 439
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 134/257 (52%), Gaps = 49/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS LIISNL F NSPF IHPVYC +PNTDG+DPD
Sbjct: 182 VELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI + + LV++K+GWD GI+ ARPSS I + R++G T + SG+ IG EMSG +
Sbjct: 241 CIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + L T GRGG + N+ I N+K++ VK I+ + HPD+ D
Sbjct: 301 EIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDKNFD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I+F NV A IC NV+L V S K W+C V
Sbjct: 361 PKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKKNSKKSPWECSNV 420
Query: 194 SGFNGQVFP-LPCPQLQ 209
G++ V P + C L+
Sbjct: 421 RGYSQWVSPGITCDSLK 437
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+EL++S ++ IISN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 213 LELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNV 271
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P +G +G E SG +
Sbjct: 272 CIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSETSGGVE 330
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+HL+ T+ GRGG I NI + + + + ++I+ GHPD D
Sbjct: 331 NVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYD 390
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P +P + G++ NV+ N +A IC+ NV L W+C+ VSG
Sbjct: 391 PSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKCRAVSG 450
Query: 196 FNGQVFPLPCPQLQNKSS-SWCS 217
V P PC +L + S S+C+
Sbjct: 451 GALDVQPSPCAELTSTSEMSFCT 473
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+EL++S ++ IISN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 187 LELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNV 245
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P +G +G E SG +
Sbjct: 246 CIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSETSGGVE 304
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+HL+ T+ GRGG I NI + + + + ++I+ GHPD D
Sbjct: 305 NVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYD 364
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P +P + G++ NV+ N +A IC+ NV L W+C+ VSG
Sbjct: 365 PSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKCRAVSG 424
Query: 196 FNGQVFPLPCPQLQNKSS-SWCS 217
V P PC +L + S S+C+
Sbjct: 425 GALDVQPSPCAELTSTSEMSFCT 447
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 135/256 (52%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VEL+NS +LI SN F NSPF TIHPVYCS +PNTDGIDPD
Sbjct: 312 VELINSTEVLI-SNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNV 370
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+++KSGWD GI+ RPS+NI++ R++G T T +G+ IG EMSG +
Sbjct: 371 CIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRT-TSAGIAIGSEMSGGVS 429
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + + T GRGG + N+ I N+ + V I I+ + HPD+ D
Sbjct: 430 EVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYD 489
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ VNV N +A IC+ N++L V + + W C V G
Sbjct: 490 RDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNITLNV-SKNNPWNCSDVKG 548
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C QL +
Sbjct: 549 YSELVSPESCEQLNER 564
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+EL++S ++ IISN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 187 LELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNV 245
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P +G +G E SG +
Sbjct: 246 CIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSETSGGVE 304
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+HL+ T+ GRGG I NI + + + + ++I+ GHPD D
Sbjct: 305 NVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYD 364
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P +P + G++ NV+ N +A IC+ NV L W+C+ VSG
Sbjct: 365 PSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKCRAVSG 424
Query: 196 FNGQVFPLPCPQLQNKSS-SWCS 217
V P PC +L + S S+C+
Sbjct: 425 GALDVQPSPCAELTSTSEMSFCT 447
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 145/268 (54%), Gaps = 51/268 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
+EL+NS NI IISN+ F +SPF IHPVYC +PNTDGIDPD
Sbjct: 182 IELINSRNI-IISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPSS I +RR++G++P +G+ +G E SG +
Sbjct: 241 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSP-FAGIAVGSETSGGVQ 299
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + HL T+ GRGG I NI + N+ ME+ + IKI+ HPD+ +
Sbjct: 300 NVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFN 359
Query: 148 PKAIPKIRGISFVNVFSV------------NTTKAPICMKNVSLL--VLAPSVKWQCQFV 193
P A+P ++G+ +V+ + N+ IC+ ++L + + W+C V
Sbjct: 360 PNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAPWKCSDV 419
Query: 194 SGFNGQVFPLPCPQLQN--KSSSWCSFL 219
SG V P PC +L + ++ S SF+
Sbjct: 420 SGAAVGVSPWPCSELTSPGQTGSCSSFI 447
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 130/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S N+ +ISNL F NSPF IHPVYCS +PNTDGI+PD
Sbjct: 182 VELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNI 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ A PSSNI++ ++G T +G+ IG EMSG I
Sbjct: 241 CIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG + N+ I ++ M V + I+I+ HPD D
Sbjct: 301 EVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDNNYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV +N A IC+ NVSL V + W C + G
Sbjct: 361 RNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQSMH-PWNCSLIQG 419
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 420 YSNSVIPESCDQLR 433
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 135/256 (52%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELMNS +LI SN+ F NSPF TIHPVYCS +PNTDGI+PD
Sbjct: 190 VELMNSTGVLI-SNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNV 248
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ L+++KSGWD GI+ RPS+NI +RR+ G T T +G+ IG EMSG +
Sbjct: 249 CIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSEMSGGVS 307
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + + T GRGG + N+ I N+ + V I I+ + HPD+ D
Sbjct: 308 EVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPDDTYD 367
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P A+P I I+ +V +A IC+ N++L V + + W C +V G
Sbjct: 368 PDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNV-SKKLPWNCSYVKG 426
Query: 196 FNGQVFPLPCPQLQNK 211
++ V P C L+ +
Sbjct: 427 YSDLVSPEACEPLRER 442
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 131/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE M S + ++SNL F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 183 VEFMYSTRV-VVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNV 241
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +V +KSGWD GI+ A PSSNI+++ ++G T + +G+ +G EMSG I
Sbjct: 242 CIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGIS 301
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + T GRGG ++N+ I ++ M+ V I I+I+ HPD+ D
Sbjct: 302 NVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYD 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV N A IC+ NV+L + W C V G
Sbjct: 362 KNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTLSTKSMD-PWNCSLVEG 420
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C +L+
Sbjct: 421 YSNSVSPEICEELR 434
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 131/255 (51%), Gaps = 47/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S N+ +ISNL F NSPF IHPVYCS +PNTDG+ PD
Sbjct: 182 VELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G T SG+ G EMSG I
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V L T GRGG +EN+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C + G
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEG 419
Query: 196 FNGQVFPLPCPQLQN 210
++ V P C QL++
Sbjct: 420 YSNSVIPESCEQLRS 434
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 131/255 (51%), Gaps = 47/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S N+ +ISNL F NSPF IHPVYCS +PNTDG+ PD
Sbjct: 182 VELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G T SG+ G EMSG I
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V L T GRGG +EN+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C + G
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEG 419
Query: 196 FNGQVFPLPCPQLQN 210
++ V P C QL++
Sbjct: 420 YSNSVIPESCEQLRS 434
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 142/263 (53%), Gaps = 48/263 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+S++I I+SN+ F +SPF IHPVYCS +PNTDGIDPD
Sbjct: 183 LELMSSSDI-IVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNI 241
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ +A+KSGWD GIA R SS I VRR++G++P +G +G E SG +
Sbjct: 242 CIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRITGSSP-FAGFAVGSETSGGVE 300
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +HL+ T+ GRGG I NI + ++ ++ V+ ++I HPD+ +
Sbjct: 301 NVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYN 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + ++ NV N +A IC+ NV AP W+C+ VSG
Sbjct: 361 RSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKCEAVSG 420
Query: 196 FNGQVFPLPCPQLQNKS-SSWCS 217
V P PC +L + S +S+C+
Sbjct: 421 GALDVQPSPCTELTSTSGTSFCT 443
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 135/263 (51%), Gaps = 47/263 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S+NI IISNL F NSP +IHPVYCS P T GI PD
Sbjct: 179 IELVGSDNI-IISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHV 237
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G+ + +KSGWD G+A +P+SN+ +R V + + +G+ G EMSG I
Sbjct: 238 CIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGIS 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ + L T +GRGG ++NI I + K+E + + I ++ S HPD+ D
Sbjct: 298 DIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL-LVLAPSVKWQCQFVS 194
P A+P + ++F NV N A PIC+ NV+ S W C V
Sbjct: 358 PNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWFCSNVM 417
Query: 195 GFNGQVFPLPCPQLQNKSSSWCS 217
G + +VFP PCP LQN S++ S
Sbjct: 418 GISKEVFPEPCPDLQNTYSNFSS 440
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 139/255 (54%), Gaps = 49/255 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +NS I IISN+ F NSPF IHPVY +PNTDGIDPD
Sbjct: 147 VEFVNSRGI-IISNVIFRNSPFWNIHPVYSRNVVIRYVTILAPLDSPNTDGIDPDSSSNV 205
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P SG+ +G E SG +
Sbjct: 206 CIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FSGIAVGSETSGGVK 264
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ H+ T+ GRGG I+NI + ++ ME V+ IKI+ HPD+ +
Sbjct: 265 NVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDHPDDSFN 324
Query: 148 PKAIPKIRGISFVNVFS------------VNTTKAPICMKNVSLL-VLAP-SVKWQCQFV 193
P A+P + GI+ +++ N+ IC+ N++L V P S W+C V
Sbjct: 325 PNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVPGPRSSPWKCSDV 384
Query: 194 SGFNGQVFPLPCPQL 208
SG V P PC +L
Sbjct: 385 SGSALLVSPWPCSEL 399
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 132/255 (51%), Gaps = 47/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S N+ +ISNL F NSPF IHPVYCS +PNTDG+ PD
Sbjct: 166 VELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNV 224
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ A+PSSNI++ ++G T +G+ G EMSG I
Sbjct: 225 CINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGAGIAFGSEMSGGIS 284
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V L T GRGG ++N+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 285 EVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYD 344
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C + G
Sbjct: 345 RTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEG 403
Query: 196 FNGQVFPLPCPQLQN 210
++ V P C QL++
Sbjct: 404 YSNSVIPESCEQLKS 418
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
+ELM S ++ ++SN+ F +SPF IHPVYCS +PNTDGID
Sbjct: 178 LELMYSTDV-VVSNVVFQDSPFWNIHPVYCSNVVIANVTVLAPHDSPNTDGIDLDSSSNV 236
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P +G +G E SG +
Sbjct: 237 CIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSETSGGVE 295
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+HL+ T+ GRGG I NI + + + + ++I+ GHPD +
Sbjct: 296 NVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYN 355
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P +P + ++ NV N +A IC+ NV L A W+C+ VSG
Sbjct: 356 PSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNVKLYGSASIGPWKCRAVSG 415
Query: 196 FNGQVFPLPCPQLQNKSSS 214
V P PC +L + S +
Sbjct: 416 AALDVQPSPCTELASTSET 434
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 127/252 (50%), Gaps = 47/252 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE + S N+ ++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 180 VEFLASTNV-VVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDST 238
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I G+ +A+KSGWD GIA RP++N+ +RRV+ + + S + G EMSG I
Sbjct: 239 CIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGIS 298
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ + T KGRGG I+ III ++ ME + + HPD+ D
Sbjct: 299 NVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFD 358
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAP-SVKWQCQFVS 194
P A+P + I+ NV N T A IC+ N+SL P S+ W C VS
Sbjct: 359 PNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWVCSNVS 418
Query: 195 GFNGQVFPLPCP 206
GF+ VFP PCP
Sbjct: 419 GFSQWVFPEPCP 430
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 137/265 (51%), Gaps = 49/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE ++S NI IISN+ NSPF T+HPVYC+ +PNTDGIDPD
Sbjct: 170 VEFVSSTNI-IISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNV 228
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ ++A+KSGWD GIA +PSSNI +RRV+G T + + IG E SG I
Sbjct: 229 CIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIE 288
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ L T GRG I N+++ +I + ++ I IS S+ HPD G +
Sbjct: 289 NVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGYN 348
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP-------------ICMKNVSLLVLAPSVKWQCQFVS 194
A P + ++ V + NT P IC+++++L W+C V
Sbjct: 349 ATAFPVVEKVTVRGV-TGNTLDRPGRILGIPEVPFRDICLEDIALDASTGLTAWKCTDVE 407
Query: 195 GFNGQVFPLPCPQL-QNKSSSWCSF 218
G++ V P C +L +N S C F
Sbjct: 408 GYSSSVTPKICKELSENNSPDACPF 432
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S ++ +ISNL F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 182 VELMYSTDV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ ARPS+NI++ ++G T +G+ G EMSG I
Sbjct: 241 CIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG ++N+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 301 EVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV VN A IC+ NVSL V + W C + G
Sbjct: 361 RNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMH-PWNCSLIEG 419
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 420 YSNSVIPESCEQLR 433
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 127/252 (50%), Gaps = 47/252 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE + S N+ ++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 178 VEFLASTNV-VVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDST 236
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I G+ +A+KSGWD GIA RP++N+ +RRV+ + + S + G EMSG I
Sbjct: 237 CIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGIS 296
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ + T KGRGG I+ III ++ ME + + HPD+ D
Sbjct: 297 NVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFD 356
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAP-SVKWQCQFVS 194
P A+P + I+ NV N T A IC+ N+SL P S+ W C VS
Sbjct: 357 PNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWVCSNVS 416
Query: 195 GFNGQVFPLPCP 206
GF+ VFP PCP
Sbjct: 417 GFSQWVFPEPCP 428
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S ++ +ISNL F NSPF IHPVYCS +PNTDGIDPD
Sbjct: 166 VELMYSTDV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNV 224
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ ARPS+NI++ ++G T +G+ G EMSG I
Sbjct: 225 CIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGIS 284
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG ++N+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 285 EVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYD 344
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV VN A IC+ NVSL V + W C + G
Sbjct: 345 RNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMH-PWNCSLIEG 403
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 404 YSNSVIPESCEQLR 417
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 142/277 (51%), Gaps = 54/277 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+ S+NI IISN+ F ++P+ +HP YC+ +PNTDGIDPD
Sbjct: 184 LELLYSDNI-IISNVTFVDAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGIDPDSSSRV 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI PS +I +RR++ +PT + + +G EMSG I
Sbjct: 243 KIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAMIALGSEMSGGIR 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + + GRGG + +I +R + + +K ++ HPD D
Sbjct: 303 DVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMTGNYGQHPDNTSD 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK---WQCQF 192
P A+P++ GI++ +VF+ N T A IC+ NV+ LAP K W C
Sbjct: 363 PNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTAR-LAPDAKELQWNCTN 421
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNFG 229
V G V P PCP+L + C+F E E+L G
Sbjct: 422 VKGVTSHVSPKPCPELAAEGKP-CAFPE---EELVIG 454
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 144/277 (51%), Gaps = 54/277 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+EL+ SNNI IISN+ F +SP +HP YC+ +PNTDGIDPD
Sbjct: 179 LELLYSNNI-IISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPNTDGIDPDSSSHV 237
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +AVKSGWD GI PS +I +RR++ +PT + + +G EMSG I
Sbjct: 238 KIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGSEMSGGIR 297
Query: 99 NV-TVDHLDTDK----------GRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V VD++ D GRGG ++++ +R + + +K ++ HPD D
Sbjct: 298 DVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK---WQCQF 192
P A+P++ GI++ +VF+ N T A ICM NV+ LAP K W C
Sbjct: 358 PNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQ-LAPDAKKLQWNCTD 416
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNFG 229
V G V P+PCP+L + C+F E E+L G
Sbjct: 417 VKGVASDVSPVPCPEL-GAAGKPCAFPE---EELVIG 449
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 134/259 (51%), Gaps = 48/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE ++S NI IISN+ NSPF T+HPVYC+ +PNTDGIDPD
Sbjct: 170 VEFVSSTNI-IISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNV 228
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI +G+ ++A+KSGWD GIA +PSSNI +RRV+G T + + IG E SG I
Sbjct: 229 CIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSETSGGIE 288
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ L T GRG I N+++ +I + ++ I IS S+ HPD G +
Sbjct: 289 NVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHPDNGFN 348
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP-------------ICMKNVSLLVLAPSVKWQCQFVS 194
A P + ++ V + NT P IC+++++L W+C V
Sbjct: 349 ATAFPVVEKVTVRGV-TGNTLDRPGRILGIPEVPFRDICLEDIALDATTGLTAWKCTDVE 407
Query: 195 GFNGQVFPLPCPQLQNKSS 213
G++ V P C QL ++
Sbjct: 408 GYSSSVTPKICSQLSENNT 426
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S NI I SN+ +SP IHPVYC+ PNTDGI+PD
Sbjct: 185 IELLFSKNIQI-SNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNT 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ +++RR++ +P +GV +G EMSG I
Sbjct: 244 LIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIK 303
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRG +++I R I M+ +K +S N HPDEG D
Sbjct: 304 DVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFD 363
Query: 148 PKAIPKIRGISFVNVFSVNTT---------KAP---ICMKNVSLLVL--APSVKWQCQFV 193
PKA+P++ I++ ++ + N T K P IC+ NV++ + A V+W C V
Sbjct: 364 PKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDV 423
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
+G +V P PC L K +
Sbjct: 424 AGVTSRVTPEPCSLLPEKKA 443
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 127/250 (50%), Gaps = 47/250 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S N+ +ISNL F NSPF IHPVYCS +PNTDG+ PD
Sbjct: 182 VELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G T SG+ G EMSG I
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V L T GRGG +EN+ I ++ M+ V + I+I+ HPD+ D
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ +V VN A IC+ NVSL V + W C + G
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEG 419
Query: 196 FNGQVFPLPC 205
++ V P C
Sbjct: 420 YSNSVIPESC 429
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 47/247 (19%)
Query: 17 FCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIESGNGLVAV 54
F +SPF IHPVYCS +PNTDGIDPD CYI +G+ L+A+
Sbjct: 60 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 119
Query: 55 KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD-------- 106
KSGWD G+A RPSS+I +RR++G++P +G +G E SG + +V +HL+
Sbjct: 120 KSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 178
Query: 107 ---TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVF 163
T+ GRGG I N+ + ++ ++ V+ ++I+ GHPD+ D A+P + G++ NV
Sbjct: 179 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 238
Query: 164 SVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNK 211
N +A IC+ NV L A W+C+ VSG V P PC +L +
Sbjct: 239 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 298
Query: 212 SS-SWCS 217
S S+C+
Sbjct: 299 SGMSFCT 305
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 47/247 (19%)
Query: 17 FCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIESGNGLVAV 54
F +SPF IHPVYCS +PNTDGIDPD CYI +G+ L+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 55 KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD-------- 106
KSGWD G+A RPSS+I +RR++G++P +G +G E SG + +V +HL+
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 131
Query: 107 ---TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVF 163
T+ GRGG I N+ + ++ ++ V+ ++I+ GHPD+ D A+P + G++ NV
Sbjct: 132 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 191
Query: 164 SVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNK 211
N +A IC+ NV L A W+C+ VSG V P PC +L +
Sbjct: 192 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 251
Query: 212 SS-SWCS 217
S S+C+
Sbjct: 252 SGMSFCT 258
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 47/247 (19%)
Query: 17 FCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIESGNGLVAV 54
F +SPF IHPVYCS +PNTDGIDPD CYI +G+ L+A+
Sbjct: 197 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 256
Query: 55 KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD-------- 106
KSGWD G+A RPSS+I +RR++G++P +G +G E SG + +V +HL+
Sbjct: 257 KSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGI 315
Query: 107 ---TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVF 163
T+ GRGG I N+ + ++ ++ V+ ++I+ GHPD+ D A+P + G++ NV
Sbjct: 316 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 375
Query: 164 SVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNK 211
N +A IC+ NV L A W+C+ VSG V P PC +L +
Sbjct: 376 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 435
Query: 212 SS-SWCS 217
S S+C+
Sbjct: 436 SGMSFCT 442
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 125/250 (50%), Gaps = 46/250 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VEL++S++ILI SNL F +SPF TIHPVYC +PNTDGIDPD
Sbjct: 145 VELIDSSDILI-SNLTFRDSPFWTIHPVYCRNVVVKDMTILAPLDSPNTDGIDPDSSHNV 203
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ +A+KSGWD G + PS +I VRR++ + T +G+ G EMSG I
Sbjct: 204 CIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSKTSAGIAFGSEMSGGIS 263
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V VDH+ T GRGG I N+ + N+ M V I + HPDE +
Sbjct: 264 DVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTAIAFTGNYGEHPDENWN 323
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P I IS NV N T A I + N++L V + S W C V+G
Sbjct: 324 RTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIALDVKSESDDWNCSSVAG 383
Query: 196 FNGQVFPLPC 205
V+P PC
Sbjct: 384 TYFFVWPQPC 393
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 139/265 (52%), Gaps = 49/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL++S+NI IISN+ F ++P+ +HP YC+ +PNTDGIDPD
Sbjct: 184 LELLHSDNI-IISNVTFVDAPYWNLHPTYCTNVTISGVTILAPLNSPNTDGIDPDSSTHV 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI PS +I +RR++ +PT + + +G EMSG I
Sbjct: 243 KIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAMIALGSEMSGGIR 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + + GRGG +++I +R + + +K ++ HPD +
Sbjct: 303 DVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMTGNYGQHPDNTSN 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNV--SLLVLAPSVKWQCQFV 193
P A+P++ GI++ +VF+ N T A IC+ NV SL A ++W C V
Sbjct: 363 PNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVTASLAPNATELQWNCTNV 422
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G V P PCP+L + C+F
Sbjct: 423 KGVTSNVSPKPCPELGAEGKP-CAF 446
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY--- 44
VE ++SN+I IISNL F NSP IHPVYCS +P T G+ PD
Sbjct: 266 VEFISSNDI-IISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYI 324
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G + +KSGWD GIA +P+ N+ +RRV + + SG+ G EMSG I
Sbjct: 325 CIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGIS 384
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ V+H L T KGRGG I+ I+I +++ME V + I + HPD+ D
Sbjct: 385 DILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYD 444
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK-WQCQFVS 194
P A+P + GI+F ++ N + A IC+ N+SL + + S K W C V
Sbjct: 445 PGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVF 504
Query: 195 GFNGQVFPLPCPQLQNKSS 213
G + V P PCP LQ K+S
Sbjct: 505 GSSECVSPEPCPNLQTKTS 523
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 134/256 (52%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V+LM S+NI IISN+ +SPF T+H C APNTDGIDPD
Sbjct: 253 VQLMRSSNI-IISNITLQDSPFWTLHTYDCKNVTISETTILAPIVGAPNTDGIDPDSCEN 311
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ VA+KSGWD GIA RPS+NI +R V+ + +GV IG EMSG +
Sbjct: 312 VMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSAGVSIGSEMSGGV 371
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRG + NI+ RNI +E V++ I I N HPDEG
Sbjct: 372 SNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHPDEGF 431
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSLLVLAPSVK------WQCQFV 193
+PKA+P + IS+ ++ A I +KNV+ ++ + +QC +V
Sbjct: 432 NPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMSVGILDKKHHVFQCSYV 491
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 492 QGQVIGYVFPVPCKNL 507
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY--- 44
VE ++SN+I IISNL F NSP IHPVYCS +P T G+ PD
Sbjct: 201 VEFISSNDI-IISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYI 259
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G + +KSGWD GIA +P+ N+ +RRV + + SG+ G EMSG I
Sbjct: 260 CIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGIS 319
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ V+H L T KGRGG I+ I+I +++ME V + I + HPD+ D
Sbjct: 320 DILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYD 379
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK-WQCQFVS 194
P A+P + GI+F ++ N + A IC+ N+SL + + S K W C V
Sbjct: 380 PGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVF 439
Query: 195 GFNGQVFPLPCPQLQNKSS 213
G + V P PCP LQ K+S
Sbjct: 440 GSSECVSPEPCPNLQTKTS 458
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++ILI +N+ +SPF T+HP C APNTDGIDPD
Sbjct: 215 VQIMWSSDILI-TNITLRDSPFWTLHPYDCKNVTIRNVTILAPVLEAPNTDGIDPDSCED 273
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI +R + + +G+ IG EMSG +
Sbjct: 274 MVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRSMVSAGISIGSEMSGGV 333
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
N+TV++L T GRGG + +I RN+ + V++ I I N HPDEG
Sbjct: 334 SNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGY 393
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DPKA+P +R ISF V + P I ++NV+ ++ + + QC F
Sbjct: 394 DPKAVPVLRDISFTGVHG-QGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAF 452
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 453 VQGRVIGTIFPAPCENL 469
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
+++M S++I +I+++ +SPF T+HP C APNTDGIDPD
Sbjct: 284 LQIMWSSDI-VITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSCED 342
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS NI +R + + +G+ IG EMSG I
Sbjct: 343 MLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGI 402
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++L T GRGG + I RNI E V++ I + N HPD+G
Sbjct: 403 SNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEHPDDGY 462
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DP A+P IR ISF NV+ + + P I ++NV+ ++ + + QC F
Sbjct: 463 DPTALPVIRDISFTNVYG-HGVRVPVRIHGSEEIPVRNVTFRDMSVGLTYKKKHIFQCAF 521
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 522 VHGRVIGTIFPSPCENL 538
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 137/266 (51%), Gaps = 51/266 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S +I IISN+ F ++P +HP YC+ +PNTDGIDPD
Sbjct: 99 LELLYSRDI-IISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGIDPDSSSHV 157
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI PS +I VRR++ +PT + + +G EMSG I
Sbjct: 158 KIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGSEMSGGIQ 217
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ + + GRGG + ++ +R + + +K ++ HPD D
Sbjct: 218 DVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQHPDNSSD 277
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK---WQCQF 192
PKA+P++ GI++ +VF+ N T A ICM NV+ LAP K W C
Sbjct: 278 PKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQ-LAPKAKKLQWNCTD 336
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSF 218
V G V P PCP+L + C+F
Sbjct: 337 VQGVAYGVSPEPCPELGAEGKP-CTF 361
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 133/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S++I IISN+ +SPF T+H C + APNTDGIDPD
Sbjct: 239 VQLMRSSDI-IISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPDSCEN 297
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI ++ V + +GV IG EMSG +
Sbjct: 298 VVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSAGVSIGSEMSGGV 357
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+V V++ + T GRG + NI+ RNI +E V++ I I N HPDEG
Sbjct: 358 SDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVIKTDYNEHPDEGF 417
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSL------LVLAPSVKWQCQFV 193
DPKA+P I IS+ ++ A I +KNV+ +V +QC FV
Sbjct: 418 DPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMSIGIVDKKHHVFQCSFV 477
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 478 QGQVIGYVFPVPCKNL 493
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 49/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
+ELM S ++ ++SNL F +SPF IHPVYCS +PNTDGID
Sbjct: 196 LELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNV 254
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DCYI +G+ L+++KSGWD G+A RPSS I VRR++G+ P +G +G E SG +
Sbjct: 255 CVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSETSGGVE 313
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V +HL T+ GRGG I N+ + + ++ + ++I+ GHP +
Sbjct: 314 DVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYN 373
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSV--KWQCQFV 193
+P I G++ NV+ N +A IC+ NV L + W+C+ V
Sbjct: 374 ASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAV 433
Query: 194 SGFNGQVFPLPCPQLQNKSSS 214
SG V P PC +L + S +
Sbjct: 434 SGSALDVQPSPCAELASTSGT 454
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 131/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V+LM S+NI ISN+ +SPF T+H C APNTDGIDPD
Sbjct: 147 VQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCEN 205
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI + V+ + +GV IG EMSG +
Sbjct: 206 VVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGV 265
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRG + NI RNI +E +++ I I N HPDEG
Sbjct: 266 SNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGF 325
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSL------LVLAPSVKWQCQFV 193
DPKA+P I IS+ ++ A I +KNV+ LV + +QC FV
Sbjct: 326 DPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQCSFV 385
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 386 QGQVIGYVFPVPCKNL 401
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 128/259 (49%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE M+S I I SN+ NSPF IHPVYC +PNTDG+DPD
Sbjct: 189 VEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDSSSNV 247
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPS+ + VRRV G++P SG+ IG E SG +
Sbjct: 248 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSEASGGVR 306
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ H+ T+ GRGG I N+ + +++ V+ ++I+ HPD
Sbjct: 307 DVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPDAHFS 366
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + + NV+ VN + IC+ NV L W+C+ V G
Sbjct: 367 QLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWKCRDVRG 426
Query: 196 FNGQVFPLPCPQLQNKSSS 214
V P PC +L +S
Sbjct: 427 AALGVQPSPCAELATSFAS 445
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 123/257 (47%), Gaps = 46/257 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VEL++S +ILI SNL F +SPF TIHPVYC +PNTDGIDPD
Sbjct: 188 VELIDSKDILI-SNLTFRDSPFWTIHPVYCRNVVVKDMTLLAPLNSPNTDGIDPDSSQYV 246
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ +A+KSGWD G A PS +I +RR+ + T +G+ G EMSG I
Sbjct: 247 CIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAGIAFGSEMSGGIS 306
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V VDH+ T GRGG I NI + N+ M V I + HPDE +
Sbjct: 307 DVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFTGNYGEHPDENWN 366
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
P I + N+ + T A I + N++L + S W C V+G
Sbjct: 367 RTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIALDTKSESEDWNCSSVAG 426
Query: 196 FNGQVFPLPCPQLQNKS 212
V+P PCP +
Sbjct: 427 TYFFVWPQPCPDFTKEE 443
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 131/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V+LM S+NI ISN+ +SPF T+H C APNTDGIDPD
Sbjct: 247 VQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCEN 305
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI + V+ + +GV IG EMSG +
Sbjct: 306 VVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGV 365
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRG + NI RNI +E +++ I I N HPDEG
Sbjct: 366 SNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGF 425
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSL------LVLAPSVKWQCQFV 193
DPKA+P I IS+ ++ A I +KNV+ LV + +QC FV
Sbjct: 426 DPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQCSFV 485
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 486 QGQVIGYVFPVPCKNL 501
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 49/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
+ELM S ++ ++SNL F +SPF IHPVYCS +PNTDGID
Sbjct: 184 LELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNV 242
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DCYI +G+ L+++KSGWD G+A RPSS I VRR++G+ P +G +G E SG +
Sbjct: 243 CVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSETSGGVE 301
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V +HL T+ GRGG I N+ + + ++ + ++I+ GHP +
Sbjct: 302 DVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYN 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSV--KWQCQFV 193
+P + G++ NV+ N +A IC+ NV L + W+C+ V
Sbjct: 362 ASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAV 421
Query: 194 SGFNGQVFPLPCPQLQNKSSS 214
SG V P PC +L + S +
Sbjct: 422 SGSALDVQPSPCAELASTSGT 442
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 138/273 (50%), Gaps = 50/273 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------SI-----APNTDGIDPD----- 42
VEL+ S ++ ++SNL F N+P IHPVYC SI +P T GI PD
Sbjct: 179 VELVASTDV-VVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHV 237
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G +A+KSGWD GIA RP+ N+ +RRV S + G +MSG I
Sbjct: 238 CIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGIS 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+H+ T +GRGG +++II+ +I+M+ + I + HPD+ D
Sbjct: 298 NVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV-LAPSVKWQCQFVS 194
P A+P + F ++ N T A IC+ N++L V A S W+C VS
Sbjct: 358 PNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWECSNVS 417
Query: 195 GFNGQVFPLPCPQLQ---NKSSSWCSFLEFSGE 224
GF+ V P+PCP L N SSS S L G+
Sbjct: 418 GFSDSVLPIPCPDLDSPSNYSSSCLSKLSMKGK 450
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 134/268 (50%), Gaps = 50/268 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VE + S+ + ++SNL F N+P +IHPVYCS +P T GI PD
Sbjct: 176 VEFVASDYV-VVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNV 234
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C + G +++KSGWD GIA RP+ N+ +RRV + S + G +MSG I
Sbjct: 235 CIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSDMSGGIS 294
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+H T KGRGG ++ I++ +I+ME V I + HPD+ D
Sbjct: 295 NVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFD 354
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPS-VKWQCQFVS 194
P A+P + I+ +V N T A IC+ N++L + S + W C VS
Sbjct: 355 PNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITLSTNSVSPITWACSNVS 414
Query: 195 GFNGQVFPLPCPQLQN---KSSSWCSFL 219
GF+ V P PCP+L N SSS C +L
Sbjct: 415 GFSDSVLPEPCPELGNTSYDSSSSCFYL 442
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S NI I SN+ +SP IHPVYC+ PNTDGI+PD
Sbjct: 185 IEILFSKNIQI-SNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNT 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ +++RR++ +P +GV +G EMSG I
Sbjct: 244 LIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIK 303
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRG +++I R I M+ +K +S HPDEG D
Sbjct: 304 DVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFD 363
Query: 148 PKAIPKIRGISFVNVFSVNTT---------KAP---ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P+I I++ ++ + N T K P IC+ NV++ + A + K W C V
Sbjct: 364 PKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDV 423
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
+G +V P PC L K +
Sbjct: 424 AGVTSRVTPEPCSLLPEKKA 443
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 54/277 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S++I IISN+ F ++P +HP YC+ +PNTDGIDPD
Sbjct: 183 LELLYSHDI-IISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGIDPDSSSYV 241
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI PS +I VRR++ +PT + + +G EMSG I
Sbjct: 242 KIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISPTSAMIALGSEMSGGIQ 301
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + + GRGG ++++ +R + + +K ++ HPD +
Sbjct: 302 DVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSN 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK---WQCQF 192
PKA+P++ GI++ +VF+ N T A ICM NV+ LAP K W C
Sbjct: 362 PKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQ-LAPDAKKLQWNCTD 420
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNFG 229
V G V P PCP+L C+F E E+L G
Sbjct: 421 VKGVASGVSPKPCPELGAVGKP-CTFPE---EELVIG 453
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 132/258 (51%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD----- 42
+ELM+S+ I I SN+ NSP IHPVY + +PNTDGI+PD
Sbjct: 214 IELMSSDTIFI-SNVTLLNSPAWNIHPVYSKNIVIQGVTILAPTRSPNTDGINPDSCSQV 272
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ VA+KSGWD GIA P+ ++ VRR++ +PT + V IG EMSG +
Sbjct: 273 RIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGSEMSGGVR 332
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRG +++I R + + +K ++ HPD+G D
Sbjct: 333 DVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKSHPDDGYD 392
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSLLVLAP-SVKWQCQFV 193
A+P + G+SF +V + K AP ICM NV++ + P V W C V
Sbjct: 393 KTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTMEMTKPRKVMWNCADV 452
Query: 194 SGFNGQVFPLPCPQLQNK 211
G + V P PC QLQ K
Sbjct: 453 EGVSTGVTPAPCGQLQQK 470
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 132/264 (50%), Gaps = 48/264 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDCY--- 44
+EL+ S+NI ISNL F NSP +IHPVYCS P T GI PD
Sbjct: 179 IELVGSDNI-TISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHV 237
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I +G+ + +KSGWD G+A +P+S + +R V + + +G+ G EMSG I
Sbjct: 238 CIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEMSGGIS 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ + L T KGRGG ++NI I + K+E + + I ++ S HPD+ D
Sbjct: 298 DIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL--LVLAPSVKWQCQFV 193
P A+P + ++F NV N A PIC+ N + + S W C +
Sbjct: 358 PNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSWFCSDI 417
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCS 217
G + +VFP PCP LQN S++ S
Sbjct: 418 MGISEEVFPEPCPDLQNTYSNFSS 441
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 128/259 (49%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE M+S I I SN+ NSPF IHPVYC +PNTDG+DPD
Sbjct: 85 VEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSPNTDGVDPDSSSNV 143
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPS+ + VRRV G++P SG+ IG E SG +
Sbjct: 144 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSEASGGVR 202
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ H+ T+ GRGG I N+ + +++ V+ ++I+ HPD
Sbjct: 203 DVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHPDAHFS 262
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + + NV+ VN + IC+ NV L W+C+ V G
Sbjct: 263 QLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWKCRDVRG 322
Query: 196 FNGQVFPLPCPQLQNKSSS 214
V P PC +L +S
Sbjct: 323 AALGVQPSPCAELATSFAS 341
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 134/257 (52%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S +ILI SN+ +SPF T+HP C APNTDGIDPD
Sbjct: 214 VQIMWSRDILI-SNITLRDSPFWTLHPYDCKNITVRNVTILAPVHDAPNTDGIDPDSCED 272
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA +PS NI +R V + +G+ IG EMSG +
Sbjct: 273 MLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGV 332
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+TV++ + T GRGG +++I RN+ ++ V++ I I N HPDEG
Sbjct: 333 SGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGY 392
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAPICM--------KNVSLLVLAPSVKW------QCQF 192
DPKA+P ++ ISF ++ + P+ M +NV+ ++ + + QC F
Sbjct: 393 DPKALPVLKDISFTSIHG-QGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQCAF 451
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 452 VHGRVIGTIFPAPCDNL 468
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 134/257 (52%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S +ILI SN+ +SPF T+HP C APNTDGIDPD
Sbjct: 214 VQIMWSRDILI-SNITLRDSPFWTLHPYDCKNITIRNVTILAPVHDAPNTDGIDPDSCED 272
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA +PS NI +R V + +G+ IG EMSG +
Sbjct: 273 MLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGV 332
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+TV++ + T GRGG +++I RN+ ++ V++ I I N HPDEG
Sbjct: 333 SGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHPDEGY 392
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAPICM--------KNVSLLVLAPSVKW------QCQF 192
DPKA+P ++ ISF ++ + P+ M +NV+ ++ + + QC F
Sbjct: 393 DPKALPVLKDISFTSIHG-QGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQCAF 451
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 452 VHGRVIGTIFPAPCDNL 468
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 132/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S+NI IISN+ +SPF T+H C + APNTDGIDPD
Sbjct: 237 VQLMRSSNI-IISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPDSCEN 295
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI ++ V + +GV IG EMSG +
Sbjct: 296 VVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSAGVSIGSEMSGGV 355
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+V V++ + T GRG + N+I +NI E V++ I I N HPDEG
Sbjct: 356 SDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVIKTDYNEHPDEGF 415
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSL------LVLAPSVKWQCQFV 193
DPKA+P I IS+ ++ A I +KNV+ +V +QC FV
Sbjct: 416 DPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMSIGIVDKKHHVFQCSFV 475
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 476 QGQVIGYVFPVPCKNL 491
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 131/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V+LM S+NI ISN+ +SPF T+H C APNTDGIDPD
Sbjct: 247 VQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCEN 305
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI + V+ + +GV IG EMSG +
Sbjct: 306 VVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGV 365
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRG + NI RNI +E +++ I I N HPDEG
Sbjct: 366 SNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGF 425
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSL------LVLAPSVKWQCQFV 193
DPKA+P I IS+ ++ A I +KNV+ LV + +QC FV
Sbjct: 426 DPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRRNHVFQCSFV 485
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 486 QGQVIGYVFPVPCRNL 501
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 131/243 (53%), Gaps = 49/243 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDP------ 41
VE +NS +I IISN+ F +SPF IHP CS +PNTDGIDP
Sbjct: 203 VEFVNSRDI-IISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNV 261
Query: 42 ---DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ LVA KSGWD GI RPSS+I +RRV+G++P +G+ IG E SG +
Sbjct: 262 CIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSP-FAGIAIGSETSGGVE 320
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +H++ T+ GR G I+NI + ++ ME + I+IS HPD+ D
Sbjct: 321 NVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYD 380
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLL-VLAPSV-KWQCQFV 193
P A+P ++G++ NV+ V +A IC +++L V P W+C V
Sbjct: 381 PNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDV 440
Query: 194 SGF 196
SGF
Sbjct: 441 SGF 443
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 129/253 (50%), Gaps = 49/253 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++I +ISN+ +SPF T+HP C APNTDGIDPD
Sbjct: 195 VQIMYSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCED 253
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA A+PS NI +R + + +G+ IG EMSG +
Sbjct: 254 MLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGV 313
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVT+++ + T GRGG + I RNI V++ I I N HPD+G
Sbjct: 314 SNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGY 373
Query: 147 DPKAIPKIRGISFVNVFSVN-------TTKAPICMKNVSLLVLAPSVKW------QCQFV 193
DP A+P +R ISF N+ T I ++NV+ + + + QC FV
Sbjct: 374 DPTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNVGITYKKKHIFQCAFV 433
Query: 194 SG-FNGQVFPLPC 205
G G +FP PC
Sbjct: 434 EGRVIGTIFPKPC 446
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 128/256 (50%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE +S I +ISNL F NSP IHPVYCS AP +DGI PD
Sbjct: 176 VEFEDSEEI-VISNLTFLNSPAWAIHPVYCSNVTVNNITIQTSLDAPLSDGIVPDSCSNV 234
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD+ GI RP+S+I + RV + + +G EMSG I
Sbjct: 235 CIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQASLGAALALGSEMSGGIS 294
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V VDHL T GRGG I ++II +++ME V + I+ + + HPDE D
Sbjct: 295 DVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHVAIEFTGDWSSHPDEHFD 354
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV--LAPSVKWQCQFV 193
P A+P I GI+ N+ N + A IC+ NV+ + A S W C +
Sbjct: 355 PSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVNFSIPDSAHSTSWSCSNI 414
Query: 194 SGFNGQVFPLPCPQLQ 209
SG++ VFP PC LQ
Sbjct: 415 SGYSELVFPEPCTDLQ 430
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 129/253 (50%), Gaps = 49/253 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +NS NI ++SN++ NSP TIHPVYCS +PNTDG+ PD
Sbjct: 175 VEFINSKNI-VVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGV 233
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I SG V+VKSGWD GI + PS+ + +RR++ P + + G EMSG I
Sbjct: 234 CIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQAPASAAIAFGSEMSGGIK 293
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS-RGSNGHPDEGR 146
NV V+ H+ T GRGG ++NI + N+ M+ V I +S S+ HPDEG
Sbjct: 294 NVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEHPDEGY 353
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPS--VKWQCQF 192
DP A P +RGI V+ N + A IC+ N++L V S KW C
Sbjct: 354 DPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDEASQGSKWDCSN 413
Query: 193 VSGFNGQVFPLPC 205
V G + V P PC
Sbjct: 414 VKGASLGVTPTPC 426
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 136/268 (50%), Gaps = 50/268 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VE++ S+ + ++SNL F N+P +IHPVYCS +P T GI PD
Sbjct: 303 VEIVASDYV-VVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSDNV 361
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C + G +++KSGWD GIA RP+ N+ +RRV + S + G +MSG I
Sbjct: 362 CIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDMSGGIS 421
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+H T KGRGG ++ I++ +I+ME V I + HPD+ D
Sbjct: 422 NVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHPDDKFD 481
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPS-VKWQCQFVS 194
P A+P + I+ +V N + A IC+ N++L + S + W+C VS
Sbjct: 482 PNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITLSTNSVSPITWECSNVS 541
Query: 195 GFNGQVFPLPCPQLQN---KSSSWCSFL 219
GF+ V P PCP+L N SSS C +L
Sbjct: 542 GFSDSVLPEPCPELGNPSYDSSSSCFYL 569
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 131/265 (49%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I S L NSP +HPVY S +PNTDGI+PD
Sbjct: 187 IEIMYSDQIQI-SFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNI 245
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I SG+ +AVKSGWD GI P+ ++ +RR++ +P + + +G EMSG I+
Sbjct: 246 RIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEMSGGIY 305
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRGG ++NI ++ + + +K I+ HPD G D
Sbjct: 306 DVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHPDPGYD 365
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV--LAPSVKWQCQFV 193
PKA+P I GI++ +V + N TK+ IC+ NVS+ V ++W C +
Sbjct: 366 PKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQWNCSNI 425
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
SG V P PC L K C F
Sbjct: 426 SGVTSNVTPYPCALLPEKGQLECPF 450
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 130/264 (49%), Gaps = 51/264 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S++I I++N+ NSPF HP C S APNTDGIDPD
Sbjct: 217 VQLMWSSDI-IVTNITLRNSPFWHFHPYDCTNVTVSNVTILAPVSGAPNTDGIDPDSCQD 275
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GIA RPSSNI +R V+ + +G+ IG EMSG +
Sbjct: 276 VLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSEMSGGV 335
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++ + T GRGG I NI RNI + V+ I I N H D+G
Sbjct: 336 ANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGY 395
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D A P I GISF + + P I +K+V+ ++ + + QC +
Sbjct: 396 DRNAFPDITGISFKEIHGWG-VRVPVRAHGSNIIPIKDVTFQDMSVGISYKKKHIFQCSY 454
Query: 193 VSG-FNGQVFPLPCPQLQNKSSSW 215
+ G G VFP PC L W
Sbjct: 455 IEGRVIGSVFPKPCENLDVYDEQW 478
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 130/261 (49%), Gaps = 49/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE M+S I I SN+ NSPF IHPVYC +PNTDGIDPD
Sbjct: 184 VEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPHDSPNTDGIDPDSSSNV 242
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P SG+ IG E SG +
Sbjct: 243 CIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSEASGGVR 301
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIP-IKISRGSNGHPDEGR 146
+V V+ H+ T+ GRGG I N+ + N++M V+I ++I+ HPD
Sbjct: 302 DVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRISGVRIAGDVGDHPDAHF 361
Query: 147 DPKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPS-VKWQCQFV 193
A+P + + NV+ VN IC+ NV L + W+C+ V
Sbjct: 362 SQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVKLFGWRKNDAAWRCRDV 421
Query: 194 SGFNGQVFPLPCPQLQNKSSS 214
G V P PC +L +S
Sbjct: 422 RGAALGVQPSPCAELATSFAS 442
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 129/253 (50%), Gaps = 49/253 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +NS NI ++SN++ NSP TIHPVYCS +PNTDG+ PD
Sbjct: 175 VEFINSKNI-VVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGV 233
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I SG V+VKSGWD GI + PS+ + +RR++ P + + G EMSG I
Sbjct: 234 CIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQAPASAAIAFGSEMSGGIK 293
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS-RGSNGHPDEGR 146
NV V+ H+ T GRGG ++NI + N+ M+ V I +S S+ HPDEG
Sbjct: 294 NVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEHPDEGY 353
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV--LAPSVKWQCQF 192
DP A P +RGI V+ N + A IC+ N++L V + KW C
Sbjct: 354 DPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDDASQGSKWDCSN 413
Query: 193 VSGFNGQVFPLPC 205
V G + V P PC
Sbjct: 414 VKGASLGVTPTPC 426
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S + +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 174 VEFLHSEEV-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNV 232
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +++KSGWD+ GI+ RP+S+I + RV + + + IG EMSG I
Sbjct: 233 CIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEMSGGIS 292
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ VDH+ T GRGG I +++ ++ M+ V + I+ + + HPD+ D
Sbjct: 293 DIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFD 352
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNV--SLLVLAPSVKWQCQFV 193
P +P I I+ N+ N + A IC+ N+ S+ LAPS W C V
Sbjct: 353 PSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADLAPSSAWTCSNV 412
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
G++ VFP PC +L + S+
Sbjct: 413 HGYSELVFPKPCSELHDTST 432
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 132/257 (51%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++I+ + N+ NSPF T+HP C APNTDGIDPD
Sbjct: 216 VQIMWSSDIVFM-NITLRNSPFWTLHPYDCKNVTIRNVTILAPIFEAPNTDGIDPDSCED 274
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI +R + + +G+ IG EMSG +
Sbjct: 275 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEMSGGV 334
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+VTV++L T GRG + NI RN+ + V++ I I N HPDEG
Sbjct: 335 SSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRVGIVIKTDYNEHPDEGY 394
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DPKA+P ++ ISF + + P I ++NV+ ++ + + QC F
Sbjct: 395 DPKAVPTLQDISFSGIHG-QGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAF 453
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 454 VQGRVIGTIFPAPCENL 470
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 132/257 (51%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++I + +N+ +SPF T+HP C APNTDGIDPD
Sbjct: 216 VQIMWSSDI-VFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPIFEAPNTDGIDPDSCED 274
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS+NI +R + + +G+ IG EMSG +
Sbjct: 275 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEMSGGV 334
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++ + T GRGG + +I RN+ + V++ I I N HPDEG
Sbjct: 335 SNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGY 394
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DPKA+P + ISF + + P I ++NV+ ++ + + QC F
Sbjct: 395 DPKAVPILGDISFTGIHG-QGVRVPVRIHGSQEIPVRNVTFWDMSVGLTYKKKHIFQCAF 453
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G VFP PC L
Sbjct: 454 VQGRVIGTVFPAPCENL 470
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 136/264 (51%), Gaps = 39/264 (14%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCYIES 47
+E+M S+NI I SNL NSP +HPVY S +PNTDGI+PDCYI S
Sbjct: 193 IEIMYSDNIQI-SNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNTDGINPDCYIIS 251
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG-----RIFNVTV 102
G+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG R ++T
Sbjct: 252 GDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDITA 311
Query: 103 DH------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
H + T GRGG +++I ++ + M +K ++ H D+ DP A+P I G
Sbjct: 312 IHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGSHADKNYDPNALPVIEG 371
Query: 157 ISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFP 202
I++ ++ + N + A IC+ NV++ + A + K W C + G V P
Sbjct: 372 INYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKIPWTCTDIEGITTGVSP 431
Query: 203 LPCPQLQNKSSSWCSFLEFSGEDL 226
PC L ++ + +F E++
Sbjct: 432 RPCDLLPDQGPEKLTACDFPPENI 455
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 141/282 (50%), Gaps = 51/282 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+M SNNI I SNL NSP IHP Y S +PNTDGI+PD
Sbjct: 192 IEIMYSNNIQI-SNLTLMNSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ + +RR++ +PT + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEMSGGIQ 310
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M +K ++ HPD D
Sbjct: 311 DVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHPDNNYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLAP-SVKWQCQFV 193
P AIP I I++ ++ + N T A IC+ NV++ L P ++W C +
Sbjct: 371 PNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQWNCTDI 430
Query: 194 SGFNGQVFPLPC---PQLQNKSSSWCSFLEFSGEDLNFGVQM 232
+G + V P PC P+ + + + C+F E S N V+M
Sbjct: 431 AGISSGVTPKPCSLLPEQEKEKIADCNFPEDSLPIENIEVKM 472
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 47/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S+++ ++SNL F N+P +IHPVYCS +PNT GI PD
Sbjct: 178 IELVASDHV-VVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPPESPNTVGIVPDSSDHV 236
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G +++KSGWD GIA RP+ N+ +RRV + S + G +MSG I
Sbjct: 237 CIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSDMSGGIS 296
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ V+++ T +GRGG ++ III +I+ME + I + HPD+ D
Sbjct: 297 NILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAIAATGYCGSHPDDKFD 356
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV-LAPSVKWQCQFVS 194
P A+P + I ++ N T A IC+ N++L S+ W+C VS
Sbjct: 357 PNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITLSTNSVSSIPWECSNVS 416
Query: 195 GFNGQVFPLPCPQLQNKS 212
GF+ V P PCP L+ S
Sbjct: 417 GFSDYVLPKPCPDLETLS 434
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S NI I SNL NSP +HPVYCS +PNTDGI+PD
Sbjct: 183 IEIMFSTNIQI-SNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNT 241
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +PT + + +G EMSG I
Sbjct: 242 KIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIE 301
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + ++ +K ++ HPD D
Sbjct: 302 DVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYD 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P AIP I+ I++ +V + N T A IC+ NV++ + ++W C V
Sbjct: 362 PNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDV 421
Query: 194 SGFNGQVFPLPCPQLQNK 211
+G +V P PC L ++
Sbjct: 422 AGITSEVTPKPCDLLSDQ 439
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 131/256 (51%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V+LM S+NI IISN+ +SPF T+H C APNTDGIDPD
Sbjct: 251 VQLMRSSNI-IISNITLRDSPFWTLHVYDCKNVTISGTTILAPIVGAPNTDGIDPDSCEN 309
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ VA+KSGWD GIA RPS+NI +R V + +GV IG EMSG +
Sbjct: 310 VMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSAGVSIGSEMSGGV 369
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRG + NI+ RNI +E V++ I I N HPDE
Sbjct: 370 SNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHPDELF 429
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSLLVLAPSVK------WQCQFV 193
DPKA+P IS+ ++ A I ++NV+ ++ + +QC FV
Sbjct: 430 DPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMSVGILDKKHHVFQCSFV 489
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP+PC L
Sbjct: 490 QGQVIGYVFPVPCKNL 505
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 133/265 (50%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M SN + I SNL F NSP +HP+Y S +PNTDGIDPD
Sbjct: 195 IEIMYSNQVQI-SNLTFVNSPSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPDSCTDI 253
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI + P+ + +RRV+ +P + + +G EMSG I
Sbjct: 254 RIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEMSGGIR 313
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M+ +K ++ HPD G D
Sbjct: 314 DVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHPDPGFD 373
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLAP-SVKWQCQFV 193
PKA+P I GI++ ++ + N T + IC+ NV++ L P ++W C V
Sbjct: 374 PKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQWNCTDV 433
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G +V P C L K C F
Sbjct: 434 QGVTSRVTPPACSLLPEKKPVDCPF 458
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 135/270 (50%), Gaps = 51/270 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+N+ I SNL NSP IHPVYCS +PNTDGI+PD
Sbjct: 182 IEIMYSDNVQI-SNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNT 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ ++ +RR++ +PT + + +G EMSG I
Sbjct: 241 RIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIE 300
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG + +I +R + M+ +K ++ H D D
Sbjct: 301 DVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P AIP I I++ ++ + N T A IC+ NV++ + A V W C V
Sbjct: 361 PNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPWTCTDV 420
Query: 194 SGFNGQVFPLPCPQLQNKSSS---WCSFLE 220
SG + V P PC L ++ CSF E
Sbjct: 421 SGISSGVTPEPCELLPGQAEEKFGACSFPE 450
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 135/270 (50%), Gaps = 51/270 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+N+ I SNL NSP IHPVYCS +PNTDGI+PD
Sbjct: 182 IEIMYSDNVQI-SNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNT 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ ++ +RR++ +PT + + +G EMSG I
Sbjct: 241 RIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIE 300
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG + +I +R + M+ +K ++ H D D
Sbjct: 301 DVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P AIP I I++ ++ + N T A IC+ NV++ + A V W C V
Sbjct: 361 PNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDV 420
Query: 194 SGFNGQVFPLPCPQLQNKSSS---WCSFLE 220
SG + V P PC L ++ CSF E
Sbjct: 421 SGISSGVTPEPCELLPGQAEEKFGACSFPE 450
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 132/257 (51%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++I +ISN+ +SPF T+HP C APNTDGIDPD
Sbjct: 214 VQIMWSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPDSCED 272
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD G+A RPS NI +R + + +GV IG EMSG +
Sbjct: 273 MVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGV 332
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++L T GRGG +++I RN+ + V++ I I N HPD+G
Sbjct: 333 SNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGF 392
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DPKA+P + ISF V + P I +K V+ ++ + + QC +
Sbjct: 393 DPKALPILEDISFTGVHG-QGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAY 451
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G VFP PC L
Sbjct: 452 VEGRVIGTVFPAPCENL 468
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 129/257 (50%), Gaps = 52/257 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V++M S++I +I+N+ +SPF TIHP C APNTDGIDPD
Sbjct: 213 VQIMFSSDI-VITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCED 271
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GI RPS NI +R + +TP +G+ IG EMSG +
Sbjct: 272 MLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKSTP-FAGISIGSEMSGGV 330
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++L T GRG + I RNI E V++ I + N HPD+G
Sbjct: 331 SNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGY 390
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSL------LVLAPSVKWQCQF 192
DP A+P +R ISF V + P I ++NV+ L +QC F
Sbjct: 391 DPLALPILRDISFTTVHG-QGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQCAF 449
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G ++P PC L
Sbjct: 450 VQGRVIGTIYPAPCENL 466
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 133/267 (49%), Gaps = 49/267 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E + S+ + I SNL NSP +HP YCS +PNTDGI+PD
Sbjct: 171 IEFLYSDQVQI-SNLTLINSPSWNVHPTYCSNVLIQWLTILAPVDSPNTDGINPDSSSNV 229
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
++ SG+ +AVKSGWD GI RP+ ++ +RR + +P + + +G EMSG I
Sbjct: 230 RIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEMSGGIQ 289
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG +++I +R + ++ +K ++ HPD G D
Sbjct: 290 DVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHPDTGYD 349
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNV--SLLVLAPSVKWQCQFV 193
PKA+P+I+GIS+ ++ + N T + IC+ NV SL ++W C +
Sbjct: 350 PKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQWNCTDI 409
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLE 220
G + +V P PC L KS C F E
Sbjct: 410 QGVSSKVTPQPCAALLEKSIE-CPFPE 435
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 47/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ SN + ++SNL F N+P +IHPVYCS +P T GI PD
Sbjct: 189 IELVASNRV-VVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPQESPYTIGIVPDSSDHV 247
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G +++KSGWD GIA RP+ N+ +RRV + S + G +MSG I
Sbjct: 248 CIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAYSGSTIAFGSDMSGGIS 307
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ V+++ T +GRGG ++ III +I+ME + + + HPD+ D
Sbjct: 308 NILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAMAATGYCGSHPDDKFD 367
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV-LAPSVKWQCQFVS 194
P A+P + I ++ N T A IC+ NV+L + S+ W+C VS
Sbjct: 368 PNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTLSINSVSSIPWECSNVS 427
Query: 195 GFNGQVFPLPCPQLQNKS 212
GF+ V P PCP L+ S
Sbjct: 428 GFSDSVLPKPCPDLETLS 445
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S NI I SNL NSP +HPVYCS +PNTDGI+PD
Sbjct: 69 IEIMFSTNIQI-SNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNT 127
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +PT + + +G EMSG I
Sbjct: 128 KIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIE 187
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + ++ +K ++ HPD D
Sbjct: 188 DVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYD 247
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P AIP I+ I++ +V + N T A IC+ NV++ + ++W C V
Sbjct: 248 PNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDV 307
Query: 194 SGFNGQVFPLPCPQLQNK 211
+G +V P PC L ++
Sbjct: 308 AGITSEVTPKPCDLLSDQ 325
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 133/266 (50%), Gaps = 50/266 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+ + +ISN+ NSP IHPVY S +PNTDGI+PD
Sbjct: 199 IEVMHSDTV-VISNVTLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGINPDSCSHV 257
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GIA PS +I VRR++ +PT + + +G EMSG I
Sbjct: 258 RIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSEMSGGIS 317
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG + ++ +R + ++ +K ++ HPD+G D
Sbjct: 318 DVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSHPDDGYD 377
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSLLVLAPSVK--WQCQF 192
P AIP + IS+ +V + K AP IC+ NV+ L+ S K W C
Sbjct: 378 PNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVT-ATLSKSRKYPWTCTD 436
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSF 218
+ G + V P PC LQ C F
Sbjct: 437 IEGVSTGVTPAPCQPLQGAHDGACPF 462
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S N+ I SN+ +SP IHPVYC+ +PNTDGI+PD
Sbjct: 196 IEIMFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNT 254
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EMSG I
Sbjct: 255 LIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEMSGGIK 314
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRGG +++I R M+ +K +S N HP G D
Sbjct: 315 DVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFD 374
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P+I I++ ++ + N T+ ICM N+ + + A K W C +
Sbjct: 375 PKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTNI 434
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
SG + +V P PC L K +
Sbjct: 435 SGVSSKVTPKPCSLLPEKGA 454
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S NI I SNL NSP +HPVYCS +PNTDGI+PD
Sbjct: 192 IEIMFSTNIQI-SNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ + +RR++ +PT + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIE 310
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + ++ +K ++ HPD D
Sbjct: 311 DVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPS--VKWQCQFV 193
P AIP I+ I++ +V + N T A IC+ NV++ + S ++W C V
Sbjct: 371 PNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQWNCTDV 430
Query: 194 SGFNGQVFPLPCPQLQNK 211
+G +V P PC L ++
Sbjct: 431 AGITSEVNPKPCALLPDQ 448
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S + +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 174 VEFLHSEEV-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNV 232
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +++KSGWD+ GI+ RP+S+I + RV + + + IG EMSG I
Sbjct: 233 CIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEMSGGIS 292
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ VDH+ T GRGG I +++ ++ M+ V + I+ + + HPD+ D
Sbjct: 293 DIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFD 352
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVL--APSVKWQCQFV 193
P +P I I+ N+ N + A IC+ N++ + APS W C V
Sbjct: 353 PSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADSAPSSAWTCSNV 412
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
G++ VFP PC +L + S+
Sbjct: 413 HGYSELVFPKPCSELHDTST 432
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 125/255 (49%), Gaps = 45/255 (17%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC------- 43
S++++++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 180 FTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNISVSAPGESPYTIGIVPDSSNNVCIE 239
Query: 44 --YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
I+ G +++KSGWD GIA RP+ ++ +RRV + + S + G EMSG I NV
Sbjct: 240 DSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSSSGSSIAFGSEMSGGISNVY 299
Query: 102 VDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+ T KGRGG I+ III N++++ + + HPD+ DP A
Sbjct: 300 VEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMAFGAIGDCGSHPDDSFDPNA 359
Query: 151 IPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSGFNG 198
IP + I+ NV N T A IC+ NVSL + A S W C V GF+
Sbjct: 360 IPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSLTIPATSTSWTCSNVIGFSE 419
Query: 199 QVFPLPCPQLQNKSS 213
V P PCP+L + S
Sbjct: 420 FVSPEPCPELNSSYS 434
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+NI I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDNIQI-SNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDSCTNV 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 253 RIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I ++ + + +K K++ N H D D
Sbjct: 313 DVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADGHYD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
P A+P+I+ I++ +V + N T A IC+ NV+L + A + K W C +
Sbjct: 373 PNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ + +F ++L
Sbjct: 433 EGMTSGVTPPPCGLLPDQGPEKITACDFPADNL 465
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 135/273 (49%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+NI I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDNIQI-SNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVTSPNTDGINPDSCTNV 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 253 RIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I ++ + + +K K++ N H D D
Sbjct: 313 DVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADSHYD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
P A+P+I+ I++ +V + N T A IC+ NV+L + A + K W C +
Sbjct: 373 PNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ + +F + L
Sbjct: 433 EGMTSGVTPPPCGLLPDQGPEKITACDFPADSL 465
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM+++ + I SN+ NSP IHPVY +PNTDGI+PD
Sbjct: 189 IELMHTDGVFI-SNVTLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPNTDGINPDSCSQV 247
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ VA+KSGWD GIA+ PS +I+VRR++ +PT + + +G EMSG I
Sbjct: 248 RIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEMSGGIR 307
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG + ++ R ++++ +K ++ HPD+G D
Sbjct: 308 DVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHPDDGYD 367
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSL-LVLAPSVKWQCQFV 193
A+P + IS+ +V + K AP ICM NV++ + V W C V
Sbjct: 368 KAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEMTKERKVSWNCADV 427
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V P PC LQ C F
Sbjct: 428 EGVSAGVTPAPCAPLQGTHGGACPF 452
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 126/225 (56%), Gaps = 29/225 (12%)
Query: 17 FCNSPFRTIHPVYCSIAPNTDGIDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 76
F +SPF IHPVYCS ++ DCYI +G+ L+A+KSGWD G+A RPSS+I +RR
Sbjct: 197 FQDSPFWNIHPVYCS----SNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRR 252
Query: 77 VSGTTPTCSGVGIGREMSGRIFNVTVDHLD-----------TDKGRGGNIENIIIRNIKM 125
++G++P +G +G E SG + +V +HL+ T+ GRGG I N+ + ++ +
Sbjct: 253 ITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTL 311
Query: 126 ERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA------------PIC 173
+ V+ ++I+ GHPD+ D A+P + G++ NV N +A IC
Sbjct: 312 DSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRIC 371
Query: 174 MKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNKSS-SWCS 217
+ NV L A W+C+ VSG V P PC +L + S S+C+
Sbjct: 372 LSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCT 416
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 123/256 (48%), Gaps = 46/256 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+M SN I I SNL NSP +HP+Y S +PNTDGIDPD
Sbjct: 130 IEIMYSNQIQI-SNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNT 188
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI + PS +I +RR++ +P + + +G EMSG I
Sbjct: 189 RIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEMSGGIQ 248
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ + L T GRG + NI + + + +K ++ HPD G D
Sbjct: 249 DIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHPDTGFD 308
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P I GI++ +V + N IC+ N ++ + + W C V G
Sbjct: 309 PKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLAWNCTDVHG 368
Query: 196 FNGQVFPLPCPQLQNK 211
V P PC LQ K
Sbjct: 369 VTSNVSPEPCALLQEK 384
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 130/257 (50%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C APNTDGIDPD
Sbjct: 212 VQIMFSSDI-VITNITLRDSPFWTLHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCED 270
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPS NI +R + + +G+ IG EMSG +
Sbjct: 271 MLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGV 330
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T +GRG + I RNI E V++ I + N HPD+G
Sbjct: 331 SNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGY 390
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DP A+P +R ISF V + P I ++NV+ ++ + + QC F
Sbjct: 391 DPMALPILRDISFTTVHG-QGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAF 449
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G ++P PC L
Sbjct: 450 VQGRVIGTIYPAPCENL 466
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 129/257 (50%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
V++M S++I +I+N+ +SPF TIHP C APNTDGIDPD
Sbjct: 213 VQIMFSSDI-VITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAPNTDGIDPDSCED 271
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GI RPS NI +R + + +G+ IG EMSG +
Sbjct: 272 MLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGV 331
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++L T GRG + I RNI E V++ I + N HPD+G
Sbjct: 332 SNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHPDDGY 391
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DP A+P +R ISF V + P I ++NV+ ++ + + QC F
Sbjct: 392 DPLALPILRDISFTTVHG-QGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQCAF 450
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G ++P PC L
Sbjct: 451 VQGRVIGTIYPAPCENL 467
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 121/250 (48%), Gaps = 46/250 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S NILI SNL F NSPF TIHPVYC APNTDGIDPD
Sbjct: 144 LELIESKNILI-SNLTFKNSPFWTIHPVYCKNVVVKSLTILNPFDAPNTDGIDPDSSQHV 202
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ +++KSGWD G + A PS +I V+R+ + + +G+ G EMSG I
Sbjct: 203 CIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAGISFGSEMSGGIS 262
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V VD + T GRGG + I ++NI + ++ I + HPDE +
Sbjct: 263 DVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVMGNYGEHPDENWN 322
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A P I I N+ N +A I + N++L V W C V+G
Sbjct: 323 RTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANIALQVNTTKQIWNCSDVAG 382
Query: 196 FNGQVFPLPC 205
VFP PC
Sbjct: 383 SYIFVFPQPC 392
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I SNL NSP +HP+Y S +PNTDGIDPD
Sbjct: 191 IEIMYSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNT 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI +P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 250 RIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQ 309
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ + T GRGG +++I ++ + + +K ++ HPD D
Sbjct: 310 DVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFD 369
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV--LAPSVKWQCQFV 193
PKA+P I GI++ +V + N T + IC+ NVS+ V ++W C V
Sbjct: 370 PKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDV 429
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
+G V P C L K C F
Sbjct: 430 AGVTSNVTPNTCQLLPEKGKFDCPF 454
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 49/268 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I S+L NSP +HP+Y +PNTDGIDPD
Sbjct: 193 IEIMYSDQIQI-SDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNT 251
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I SG+ +AVKSGWD GI P+ ++ ++R++ +P +GV +G EMSG I
Sbjct: 252 RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIR 311
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +++ + T +GRGG +++I +R + + +K ++ HPD+ D
Sbjct: 312 NVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFD 371
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA--PSVKWQCQFV 193
P A+P+I I++ +V + N T + IC+ NV + + A ++W C V
Sbjct: 372 PAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDV 431
Query: 194 SGFNGQVFPLPC-PQLQNKSSSWCSFLE 220
GF+ V P PC P + S C F E
Sbjct: 432 EGFSSDVVPPPCAPLAKAGKSGGCDFPE 459
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I SNL NSP +HP+Y S +PNTDGIDPD
Sbjct: 192 IEIMYSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI +P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGIQ 310
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ + T GRGG +++I ++ + + +K ++ HPD D
Sbjct: 311 DVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAFD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLV--LAPSVKWQCQFV 193
PKA+P I GI++ +V + N T + IC+ NVS+ V ++W C V
Sbjct: 371 PKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTDV 430
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
+G V P C L K C F
Sbjct: 431 AGVTSNVTPNTCQLLPEKGKFDCPF 455
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+ I I SNL F NSP IHPVY PNTDGI+PD
Sbjct: 206 IEIMHSDGIQI-SNLTFLNSPSWHIHPVYSRNIFIQGLTILAPVTVPNTDGINPDSCTNT 264
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 265 RIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIE 324
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG ++++ +R + M+ +K ++ HPDE D
Sbjct: 325 DVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMTGSYGSHPDEHYD 384
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA--PSVKWQCQFV 193
PKA+P I+ I++ ++ + N T IC+ NV++ + V W C V
Sbjct: 385 PKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDV 444
Query: 194 SGFNGQVFPLPCPQLQNK 211
SG+ V P PC L K
Sbjct: 445 SGYTSGVTPAPCQLLPEK 462
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 49/268 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I S+L NSP +HP+Y +PNTDGIDPD
Sbjct: 193 IEIMYSDQIQI-SDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNT 251
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I SG+ +AVKSGWD GI P+ ++ ++R++ +P +GV +G EMSG I
Sbjct: 252 RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIR 311
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV +++ + T +GRGG +++I +R + + +K ++ HPD+ D
Sbjct: 312 NVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFD 371
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA--PSVKWQCQFV 193
P A+P+I I++ +V + N T + IC+ NV + + A ++W C V
Sbjct: 372 PAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDV 431
Query: 194 SGFNGQVFPLPC-PQLQNKSSSWCSFLE 220
GF+ V P PC P + S C F E
Sbjct: 432 EGFSSDVVPPPCAPLAKAGKSGGCDFPE 459
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 137/274 (50%), Gaps = 50/274 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S++I I S+L NSP +HPVY S +PNTDGI+PD
Sbjct: 205 IELMYSSDIQI-SSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINPDSCTNV 263
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ + VRR++ +PT + + +G EMSG I
Sbjct: 264 RIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEMSGGIE 323
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M +K ++ H D+ D
Sbjct: 324 DVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHADKNYD 383
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK---WQCQF 192
P A+P I+GI++ ++ N T A IC+ NV+ + LAP K W C
Sbjct: 384 PHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVT-IGLAPKAKKQPWTCTD 442
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
+ G QV P PC L ++ + +F ++L
Sbjct: 443 IEGITSQVTPPPCDLLPDQGEEKITTCKFPEDNL 476
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 131/273 (47%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S +I I SNL NSP +HPVY +PNTDGI+PD
Sbjct: 202 IELMYSADIQI-SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNT 260
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 261 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQ 320
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M+ +K ++ H D D
Sbjct: 321 DVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYD 380
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVS--LLVLAPSVKWQCQFV 193
PKA P I+GI++ ++ + N + A IC+ NV+ L A V W C V
Sbjct: 381 PKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDV 440
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G + V P PC L ++ S F E L
Sbjct: 441 EGISSGVTPTPCSTLPDQGPEKTSLCNFPAESL 473
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 137/274 (50%), Gaps = 50/274 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S++I I S+L NSP +HPVY S +PNTDGI+PD
Sbjct: 205 IELMYSSDIQI-SSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSPNTDGINPDSCTNV 263
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ + VRR++ +PT + + +G EMSG I
Sbjct: 264 RIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEMSGGIE 323
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M +K ++ H D+ D
Sbjct: 324 DVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHADKNYD 383
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK---WQCQF 192
P A+P I+GI++ ++ N T A IC+ NV+ + LAP K W C
Sbjct: 384 PHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVT-IGLAPKAKKQPWTCTD 442
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
+ G QV P PC L ++ + +F ++L
Sbjct: 443 IEGITSQVTPPPCDLLPDQGEEKITTCKFPEDNL 476
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 131/273 (47%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S +I I SNL NSP +HPVY +PNTDGI+PD
Sbjct: 190 IELMYSADIQI-SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNT 248
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 249 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQ 308
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M+ +K ++ H D D
Sbjct: 309 DVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYD 368
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVS--LLVLAPSVKWQCQFV 193
PKA P I+GI++ ++ + N + A IC+ NV+ L A V W C V
Sbjct: 369 PKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDV 428
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G + V P PC L ++ S F E L
Sbjct: 429 EGISSGVTPTPCSTLPDQGPEKTSLCNFPAESL 461
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 125/259 (48%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+EL+ + +ILI SNL F NSPF TIHPVY +PNTDGIDPD
Sbjct: 224 LELIEAQDILI-SNLTFQNSPFWTIHPVYSKNVVVKRVTILNPLNSPNTDGIDPDSSQYV 282
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ +++KSGWD G PS I ++RV + T +G+ G EMSG I
Sbjct: 283 CIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAFSHTSAGISFGSEMSGGIS 342
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ VD + T GRG I N+ + NI M V+ I + HPDE +
Sbjct: 343 DIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVRTAIAVMGNYGEHPDENWN 402
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPICMK---------NVSLLVLAPSVK----WQCQFVS 194
A P I I N+ N T+A + + +++ +VL W C +V+
Sbjct: 403 RTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKVVLDTRTTKQGPWNCSWVT 462
Query: 195 GFNGQVFPLPCPQLQNKSS 213
GF V P PCP+L ++S
Sbjct: 463 GFYNFVLPKPCPELTMENS 481
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 49/266 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S N+ I SN+ +SP IHPVYC+ +PNTDGI+PD
Sbjct: 196 IEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNT 254
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EMSG I
Sbjct: 255 LIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIK 314
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRGG +++I R M+ +K +S N HP G D
Sbjct: 315 DVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFD 374
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I++ ++ + N T+ ICM N+ + + A K W C +
Sbjct: 375 PKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSI 434
Query: 194 SGFNGQVFPLPCPQLQNKSSSW-CSF 218
SG + +V P PC L K + C+F
Sbjct: 435 SGVSSKVTPKPCSLLPEKGAPVDCAF 460
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 126/256 (49%), Gaps = 46/256 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+M S++I I SNL NSP +HP+Y S +PNTDGIDPD
Sbjct: 192 IEIMFSDHIQI-SNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNI 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI PS +I +RR+ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIQ 310
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRG + +I I+ + + +K ++ + HPD G D
Sbjct: 311 DVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGFD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PK +P I GI++ +V + N T + IC+ NV++ ++W C + G
Sbjct: 371 PKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIHSGKKKLQWNCTDIEG 430
Query: 196 FNGQVFPLPCPQLQNK 211
V+P PC L K
Sbjct: 431 VTSNVYPKPCELLPLK 446
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S N+ I SN+ +SP IHPVYC+ +PNTDGI+PD
Sbjct: 185 IEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNT 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EMSG I
Sbjct: 244 LIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIK 303
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRGG +++I R M+ +K +S N HP G D
Sbjct: 304 DVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFD 363
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I++ ++ + N T+ ICM N+ + + A K W C +
Sbjct: 364 PKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSI 423
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
SG + +V P PC L K +
Sbjct: 424 SGVSSKVTPKPCSLLPEKGA 443
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 49/266 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S N+ I SN+ +SP IHPVYC+ +PNTDGI+PD
Sbjct: 196 IEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNT 254
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EMSG I
Sbjct: 255 LIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIK 314
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRGG +++I R M+ +K +S N HP G D
Sbjct: 315 DVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFD 374
Query: 148 PKAIPKIRGISFVNVFSVNTTK------------APICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P I I++ ++ + N T+ ICM N+ + + A K W C +
Sbjct: 375 PKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSI 434
Query: 194 SGFNGQVFPLPCPQLQNKSSSW-CSF 218
SG + +V P PC L K + C+F
Sbjct: 435 SGVSSKVTPKPCSLLPEKGAPVDCAF 460
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 130/254 (51%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+++ S+NI +ISN+ +SPF T+HP C S APNTDGIDPD
Sbjct: 210 VQILWSSNI-VISNITLRDSPFWTLHPYDCKNVTVKKVTILAPVSHAPNTDGIDPDSCED 268
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GI RPS NI +R + + +G+ IG EMSG +
Sbjct: 269 MLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGV 328
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRGG + I +N+ ++ V++ I I N HP G
Sbjct: 329 SNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVIKTDYNEHPGAGY 388
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DP+A+P +R ISF+N+ + P I ++NV+ + + + QC F
Sbjct: 389 DPRALPILRDISFMNIRG-QGVRVPVRIQGSEQIPVRNVTFQDMKVGITYKKKHIFQCAF 447
Query: 193 VSGFN-GQVFPLPC 205
V G G +FP PC
Sbjct: 448 VQGQAIGTIFPSPC 461
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 123/256 (48%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
++LM S +I I++N+ NSPF HP C S APNTDGIDPD
Sbjct: 239 LQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQD 297
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GIA RPS NI +R V + +G+ IG EMSG I
Sbjct: 298 VLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGI 357
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV+ + T GRGG I +I RNI + V+ I I N H D+G
Sbjct: 358 ANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGY 417
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSLLVLAPSVKW------QCQFV 193
D A P I ISF + + I +K++S ++ + + QC F+
Sbjct: 418 DRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQCSFI 477
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP PC L
Sbjct: 478 EGRVIGSVFPKPCENL 493
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E+M S+ I I SNL NSP +HPVY S PNTDGIDPD
Sbjct: 203 IEIMYSDQIQI-SNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNV 261
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +A+KSGWD GI + +PS NI VRR++ +P + V +G EMSG I
Sbjct: 262 LIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQ 321
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + + GRG +++I ++ + + +K ++ HPD G D
Sbjct: 322 DVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFD 381
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+PKI GI++ +V + N T A IC+ NV++ + A K W C +
Sbjct: 382 PNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDI 441
Query: 194 SGFNGQVFPLPCPQLQNK 211
SG V P PC L+ K
Sbjct: 442 SGVTSNVVPKPCELLKEK 459
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 129/257 (50%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S +I II+N+ NSPF +HP C S APNTDGIDPD
Sbjct: 221 VQLMWSKDI-IIANITLRNSPFWHLHPYDCTNVTVSNVTILSPVSGAPNTDGIDPDSSQD 279
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPSSNI++R V+ + +G+ IG EMSG +
Sbjct: 280 VLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAGISIGSEMSGGV 339
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++ + T GRGG I NI RNI + V+ I I N H D+G
Sbjct: 340 ANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGY 399
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D A P I ISF + + P I ++++S ++ + + QC +
Sbjct: 400 DRTAFPDITSISFKGIHG-RGVRVPVRAHGSDVIPIRDISFQDMSVGISYKKKHIFQCSY 458
Query: 193 VSGFNGQ-VFPLPCPQL 208
V G + VFP PC L
Sbjct: 459 VEGRVVRPVFPKPCENL 475
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 134/273 (49%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE+M S+N+ I SNL NSP +HP+Y S +PNTDGI+PD
Sbjct: 207 VEIMYSDNVQI-SNLTLVNSPSWNVHPIYSSNVVVQGITILAPVTSPNTDGINPDSCTDT 265
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 266 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSEMSGGIQ 325
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ + + T GRGG +++I +R + M+ +K ++ H D+ D
Sbjct: 326 DMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYD 385
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P A+P I+ I++ ++ + N T A IC+ NV++ + A V W C +
Sbjct: 386 PNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDI 445
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
+G + V P PC L ++ F E L
Sbjct: 446 AGISSDVTPAPCDLLPDQGEEKIGACTFPEESL 478
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 48/257 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E + S +I +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 183 LEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNL 241
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GI+ RP+S+I + RV + + + + G EMSG I
Sbjct: 242 CIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGIS 301
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ V+HL T GRGG IE+++I ++ME V + I+ + + HPD+ D
Sbjct: 302 DIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHPDDSFD 361
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPS--VKWQCQFV 193
P +P I ++ N+ N + A IC+ N++ + A S W C V
Sbjct: 362 PSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSWSCSDV 421
Query: 194 SGFNGQVFPLPCPQLQN 210
SG++ VFP PC +L++
Sbjct: 422 SGYSEAVFPEPCTELRD 438
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 129/254 (50%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+++ S+NI +ISN+ +SPF T+HP C S APNTDGIDPD
Sbjct: 215 VQILWSSNI-VISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDGIDPDSCED 273
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GI RPS NI +R + + +G+ IG EMSG +
Sbjct: 274 MLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGV 333
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NV V++ + T GRGG + I +N+ + V++ I I N HP G
Sbjct: 334 SNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHPGTGY 393
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
DP+A+P +R ISF+N+ + P I ++NV+ + + + QC F
Sbjct: 394 DPRALPILRDISFINIRG-QGVRVPVRIQGSEQIPVRNVTFQDMKIGITYKKKHIFQCAF 452
Query: 193 VSGFN-GQVFPLPC 205
V G G +FP PC
Sbjct: 453 VQGQAIGTIFPSPC 466
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 123/256 (48%), Gaps = 49/256 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
++LM S +I I++N+ NSPF HP C S APNTDGIDPD
Sbjct: 183 LQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQD 241
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GIA RPS NI +R V + +G+ IG EMSG I
Sbjct: 242 VLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGI 301
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV+ + T GRGG I +I RNI + V+ I I N H D+G
Sbjct: 302 ANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGY 361
Query: 147 DPKAIPKIRGISFVNVFSVNTT-------KAPICMKNVSLLVLAPSVKW------QCQFV 193
D A P I ISF + + I +K++S ++ + + QC F+
Sbjct: 362 DRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQCSFI 421
Query: 194 SG-FNGQVFPLPCPQL 208
G G VFP PC L
Sbjct: 422 EGRVIGSVFPKPCENL 437
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 129/265 (48%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+ELM+S+ I I SNL NSP IHPVY S +PNTDGI+PD
Sbjct: 202 IELMHSDTIYI-SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHV 260
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI+ PS +I +RR++ +PT + + +G EMSG I
Sbjct: 261 RIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQ 320
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG ++++ +R + + +K ++ HPD+ D
Sbjct: 321 DVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHPDDKYD 380
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSL-LVLAPSVKWQCQFV 193
P AIP + IS+ +V + K AP IC+ NV+ L + W C V
Sbjct: 381 PNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKYPWTCADV 440
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V P PC LQ C F
Sbjct: 441 EGVSVNVSPAPCQPLQGAHDGACPF 465
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 128/254 (50%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C APNTDGIDPD
Sbjct: 203 VQIMWSSDI-VIANITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCED 261
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA +PS NI +R + + +G+ IG EMSG +
Sbjct: 262 MLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRSNVSAGISIGSEMSGGV 321
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++ + T GRGG + I RN+ V++ I I N HPD G
Sbjct: 322 SNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRVGIVIKTNYNEHPDAGY 381
Query: 147 DPKAIPKIRGISFVNV--------FSVNTTKAPICMKNVSLLVLAPSVKW------QCQF 192
DP A P + ISF+NV + +K I ++NV+ + + + QC F
Sbjct: 382 DPLAFPVLSDISFINVRGQGVRVPVRIEGSKE-ISVRNVTFQDMNVGITYKKKHIFQCAF 440
Query: 193 VSG-FNGQVFPLPC 205
V G G +FP PC
Sbjct: 441 VEGRVIGTIFPAPC 454
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 126/259 (48%), Gaps = 53/259 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
++LM S +I I++N+ NSPF HP C S APNTDGIDPD
Sbjct: 6 LQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQD 64
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +AVKSGWD GIA RPS NI +R V + +G+ IG EMSG I
Sbjct: 65 VLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGI 124
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV+ + T GRGG I +I RNI + V+ I I N H D+G
Sbjct: 125 ANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGY 184
Query: 147 DPKAIPKIRGISF---------VNVFSVNTTKAPICMKNVSLLVLAPSVKW------QCQ 191
D A P I ISF V V + ++ PI K++S ++ + + QC
Sbjct: 185 DRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPI--KDISFQDMSIGISYKKKHIFQCS 242
Query: 192 FVSG-FNGQVFPLPCPQLQ 209
F+ G G VFP PC L
Sbjct: 243 FIEGRVIGSVFPKPCENLD 261
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 125/260 (48%), Gaps = 49/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD----- 42
+EL+ S +ILI NL F NSP TIHPVYC + +PNTDGIDPD
Sbjct: 162 LELIGSQDILIF-NLTFQNSPSWTIHPVYCKNVVIKNLTVLNPNDSPNTDGIDPDSSQHV 220
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC---SGVGIGREMSG 95
CYI G+ +++KSGWD GI+ PS +I +RR+ + T +GV G EMSG
Sbjct: 221 CIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASKTFGIHAGVSFGSEMSG 280
Query: 96 RIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDE 144
I NV VD + T GRGG I+++ + N+ + VK + HPD+
Sbjct: 281 GISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSVKTAVAFMANYGQHPDD 340
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKAPIC------------MKNVSLLVLAPSVKWQCQF 192
+ A P I I N+ N T+A I +K ++L V + W C +
Sbjct: 341 NWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKTIALDVRSTKNVWNCSW 400
Query: 193 VSGFNGQVFPLPCPQLQNKS 212
VSG V P PC L ++
Sbjct: 401 VSGSYFFVVPQPCADLTRQN 420
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 135/272 (49%), Gaps = 51/272 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+N+ I SNL NSP +HP+Y S +PNTDGI+PD
Sbjct: 182 IEIMYSDNVQI-SNLTLVNSPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNT 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 241 RIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQ 300
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I +R + M+ +K ++ H D+ D
Sbjct: 301 DVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQFV 193
P A+P I+ I++ ++ + N T A IC+ NV++ + A V W C +
Sbjct: 361 PNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDI 420
Query: 194 SGFNGQVFPLPC---PQLQNKSSSWCSFLEFS 222
+G + V P PC P + C+F E S
Sbjct: 421 AGISSDVTPAPCGLLPDQGEEKIGACTFPEES 452
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 50/267 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE + S I ++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 178 VEFIESERI-VVSNLTFLNAPAYNIHPVYCSNVLVQNMSLSAPPESPQTIGIVPDSSNNV 236
Query: 43 CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C ES G +++KSGWD GIA R + ++ +RRV + + S + G EMSG I
Sbjct: 237 CIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSSIAFGSEMSGGIS 296
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+ + T KGRGG I+ I I ++++E + + + HPD+ D
Sbjct: 297 NVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAIGDHGLHPDDKFD 356
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P + I+ N+ N + A +C+ N++L+V + S W C V G
Sbjct: 357 PKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLMV-SSSNSWTCSNVIG 415
Query: 196 FNGQVFPLPCPQLQ---NKSSSWCSFL 219
++ VFP+PCP+L+ + SSS C L
Sbjct: 416 YSDSVFPVPCPELKSPYSNSSSACYSL 442
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E+M S+ I I SNL NSP +HPVY S PNTDGIDPD
Sbjct: 195 IEIMYSDQIQI-SNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTNV 253
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +A+KSGWD GI +PS I +RR++ +P + V +G EMSG I
Sbjct: 254 RIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGGIQ 313
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ + T GRG +++I ++ + ++ +K ++ HPD G D
Sbjct: 314 DVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGFD 373
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+PKI I++ +V + N T A IC+ N ++ + A K W C V
Sbjct: 374 PNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTDV 433
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
SG V P PC L K C F
Sbjct: 434 SGVTSNVSPTPCELLAEKEKFECPF 458
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 131/254 (51%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C + APNTDGIDPD
Sbjct: 227 VQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCED 285
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI +G+ +A+KSGWD GIA RPS+NI +R + + +GV IG EMSG I
Sbjct: 286 MVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGI 345
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVT+++L T GRGG I NI +N+ ++ V++ I I N H D+
Sbjct: 346 SNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNY 405
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D KA P + G SF + + P I ++NV+ ++ + + QC F
Sbjct: 406 DRKAYPILSGFSFAGIHG-QGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSF 464
Query: 193 VSG-FNGQVFPLPC 205
V G G +FP PC
Sbjct: 465 VKGRVFGSIFPRPC 478
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE M S+NIL+ N+ NSPF T+HPVY S APNTDG+DPD
Sbjct: 169 VEFMFSSNILV-HNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNV 227
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ VAVKSGWD G+A RPS ++ + V+ T G+ +G EMSG I+
Sbjct: 228 CIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSEMSGGIY 285
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV H+ T GRG I N + ++ + + HPD G +
Sbjct: 286 NVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYN 345
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A I ISF +V + +A C +V+L + S W C ++ G
Sbjct: 346 ASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWNCSYIEG 405
Query: 196 FNGQVFPLPCPQLQNKSSSW 215
++ V P PCP+LQ +S W
Sbjct: 406 YSRHVSPPPCPELQLESECW 425
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 131/254 (51%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C + APNTDGIDPD
Sbjct: 227 VQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCED 285
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI +G+ +A+KSGWD GIA RPS+NI +R + + +GV IG EMSG I
Sbjct: 286 MVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGI 345
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVT+++L T GRGG I NI +N+ ++ V++ I I N H D+
Sbjct: 346 SNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNY 405
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D KA P + G SF + + P I ++NV+ ++ + + QC F
Sbjct: 406 DRKAYPILSGFSFAGIHG-QGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSF 464
Query: 193 VSG-FNGQVFPLPC 205
V G G +FP PC
Sbjct: 465 VKGRVFGSIFPRPC 478
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 137/280 (48%), Gaps = 54/280 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E++ S+ I I SNL NSP +HP Y S +PNTDGIDPD
Sbjct: 189 IEILYSDQIQI-SNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNV 247
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +A+KSGWD GI +PS I +RR++ +P + + +G EMSG I
Sbjct: 248 RIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIE 307
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
NV V+ + + GRGG +++I ++ +K+ + + GS G HPD G
Sbjct: 308 NVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGF 367
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV----LAPSVKWQC 190
DPKA+PKI GI F +V + N T A IC+ NV++ + + W C
Sbjct: 368 DPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKKLPWNC 427
Query: 191 QFVSGFNGQVFPLPCPQLQNKSSSWCSFL--EFSGEDLNF 228
VSG V P PC L K C F + + ED+ F
Sbjct: 428 TDVSGVTSNVVPKPCDLLSEKKIE-CPFPTDKLAIEDVQF 466
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 131/254 (51%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C + APNTDGIDPD
Sbjct: 227 VQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCED 285
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI +G+ +A+KSGWD GIA RPS+NI +R + + +GV IG EMSG I
Sbjct: 286 MVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGI 345
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVT+++L T GRGG I NI +N+ ++ V++ I I N H D+
Sbjct: 346 SNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNY 405
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D KA P + G SF + + P I ++NV+ ++ + + QC F
Sbjct: 406 DRKAYPILSGFSFAGIHG-QGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSF 464
Query: 193 VSG-FNGQVFPLPC 205
V G G +FP PC
Sbjct: 465 VKGRVFGSIFPRPC 478
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 131/254 (51%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V++M S++I +I+N+ +SPF T+HP C + APNTDGIDPD
Sbjct: 254 VQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCED 312
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI +G+ +A+KSGWD GIA RPS+NI +R + + +GV IG EMSG I
Sbjct: 313 MVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGI 372
Query: 98 FNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVT+++L T GRGG I NI +N+ ++ V++ I I N H D+
Sbjct: 373 SNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNY 432
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D KA P + G SF + + P I ++NV+ ++ + + QC F
Sbjct: 433 DRKAYPILSGFSFAGIHG-QGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSF 491
Query: 193 VSG-FNGQVFPLPC 205
V G G +FP PC
Sbjct: 492 VKGRVFGSIFPRPC 505
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 133/270 (49%), Gaps = 51/270 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+ I I SNL F NSP IHPVY PNTDGI+PD
Sbjct: 206 IEIMHSDGIQI-SNLTFLNSPSWHIHPVYSRNIFIQSLTILAPVTVPNTDGINPDSCTNT 264
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 265 RIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIE 324
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG ++++ +R + M +K ++ HPDE D
Sbjct: 325 DVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYD 384
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA--PSVKWQCQFV 193
PKA+P I+ I++ ++ + N T IC+ NV++ + V W C V
Sbjct: 385 PKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDV 444
Query: 194 SGFNGQVFPLPC---PQLQNKSSSWCSFLE 220
SG+ V P PC P+ Q + C+F E
Sbjct: 445 SGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 474
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 51/270 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+ I I SNL F NSP IHPVY S PNTDGI+PD
Sbjct: 207 IEIMHSDGIQI-SNLTFLNSPSWHIHPVYSSNIYIQGLTILAPVTVPNTDGINPDSCTNT 265
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 266 RIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIE 325
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG ++++ +R + M +K ++ HPD+ D
Sbjct: 326 DVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHPDDHYD 385
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA--PSVKWQCQFV 193
PKA+P I+ I++ ++ + N T IC+ NV++ + V W C V
Sbjct: 386 PKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDV 445
Query: 194 SGFNGQVFPLPC---PQLQNKSSSWCSFLE 220
SG+ V P PC P+ Q + C+F E
Sbjct: 446 SGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE M S+NIL+ N+ NSPF T+HPVY S APNTDG+DPD
Sbjct: 198 VEFMFSSNILV-HNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNV 256
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI +G+ VAVKSGWD G+A RPS ++ + V+ T G+ +G EMSG I+
Sbjct: 257 CIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSEMSGGIY 314
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV H+ T GRG I N + ++ + + HPD G +
Sbjct: 315 NVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYN 374
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A I ISF +V + +A C +V+L + S W C ++ G
Sbjct: 375 ASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWNCSYIEG 434
Query: 196 FNGQVFPLPCPQLQNKSSSW 215
++ V P PCP+LQ +S W
Sbjct: 435 YSRHVSPPPCPELQLESECW 454
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 123/255 (48%), Gaps = 48/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
++LM S I I S++ NSPF T+HP C APNTDGIDPD
Sbjct: 191 IQLMWSRGIEI-SDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNV 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ VAVKSGWD GI +P +NI +R + P +GV IG EMSG I
Sbjct: 250 LIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEMSGGIT 309
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVTV++ + T GRGG + + RNI ME V++ I I HPDE D
Sbjct: 310 NVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHPDEFYD 369
Query: 148 PKAIPKIRGISFVNVFS---------VNTTKAPICMKNVSLLVLAPSVK----WQCQFVS 194
P A+P + I F ++ + + P+ + + + + K +QC F+
Sbjct: 370 PTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQCSFLQ 429
Query: 195 G-FNGQVFPLPCPQL 208
G G +FP PC L
Sbjct: 430 GEVFGTIFPKPCEDL 444
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S++I I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDSIQI-SNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNT 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 253 KIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I ++ M +K K++ N H D D
Sbjct: 313 DVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL--LVLAPSVKWQCQFV 193
P A+P+I I++ +V + N T A IC+ NV+L V A W C +
Sbjct: 373 PNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKRSWTCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ +F E L
Sbjct: 433 EGMTSGVTPPPCDLLPDQGPEKIGACDFPAESL 465
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ I I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDQIQI-SNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNT 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG
Sbjct: 253 RIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSGGIQ 312
Query: 96 --RIFNVTVDH------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
R ++T H + T GRGG +++I ++ + M +K ++ H D D
Sbjct: 313 DVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
PKA+P+I GI++ +V + N T A IC+ NV++ + A + K W C +
Sbjct: 373 PKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQPWTCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNK 211
G V P PC L ++
Sbjct: 433 EGITSGVTPKPCNSLPDQ 450
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S++I I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDSIQI-SNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNT 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 253 KIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I ++ M +K K++ N H D D
Sbjct: 313 DVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL--LVLAPSVKWQCQFV 193
P A+P+I I++ +V + N T A IC+ NV+L V A W C +
Sbjct: 373 PNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ +F E L
Sbjct: 433 EGMTSGVTPPPCDLLPDQGPEKIGACDFPAESL 465
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S +I I++N+ NSPF +HP C S APNTDGIDPD
Sbjct: 216 VQLMWSKDI-IVANITLRNSPFWHLHPYDCTNVTVSNVTIMSPVSGAPNTDGIDPDSCQD 274
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA RPSS+I +R V+ + +G+ IG EMSG +
Sbjct: 275 VLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEMSGGV 334
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
NVTV++ + T GRGG I NI RNI + V+ I I N H D+G
Sbjct: 335 ANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDGY 394
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D A P I ISF + + P I +K++S ++ + + QC +
Sbjct: 395 DRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKHIFQCSY 453
Query: 193 VSGFNGQ-VFPLPCPQL 208
+ G + VFP PC L
Sbjct: 454 LEGRVIRPVFPKPCENL 470
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 127/265 (47%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+ELM+S+ I I SNL NSP IHPVY S +PNTDGI+PD
Sbjct: 220 IELMHSDTIYI-SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHV 278
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI+ PS +I +RR++ +PT + + +G EMSG I
Sbjct: 279 RIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQ 338
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG + ++ R + + +K ++ HPD+ D
Sbjct: 339 DVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYD 398
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSL-LVLAPSVKWQCQFV 193
P A+P + IS+ +V + K AP IC+ NV+ L + W C +
Sbjct: 399 PNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPWNCADI 458
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V P PC LQ C F
Sbjct: 459 EGVSANVSPAPCDPLQGAHDGACPF 483
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 127/265 (47%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+ELM+S+ I I SNL NSP IHPVY S +PNTDGI+PD
Sbjct: 153 IELMHSDTIYI-SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHV 211
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI+ PS +I +RR++ +PT + + +G EMSG I
Sbjct: 212 RIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQ 271
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG + ++ R + + +K ++ HPD+ D
Sbjct: 272 DVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYD 331
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSL-LVLAPSVKWQCQFV 193
P A+P + IS+ +V + K AP IC+ NV+ L + W C +
Sbjct: 332 PNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPWNCADI 391
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V P PC LQ C F
Sbjct: 392 EGVSANVSPAPCDPLQGAHDGACPF 416
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 123/254 (48%), Gaps = 45/254 (17%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC------- 43
S++ +++SNL F N+P +IHPVYCS +P T GI PD
Sbjct: 182 FTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNISVSAPGESPYTIGIVPDSSNNVCIE 241
Query: 44 --YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
IE G +++KSGWD GIA RP++++ +RRV + + S V G EMSG I NV
Sbjct: 242 DSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSSVAFGSEMSGGISNVH 301
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+ + T KGRGG I+ III +++++ HPD+ DP A
Sbjct: 302 VEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAIGDCGSHPDDNFDPNA 361
Query: 151 IPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSGFNG 198
IP + I+ V N T A +C+ NVSL + W C V GF+
Sbjct: 362 IPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSLAIRNTLSPWTCSNVVGFSE 421
Query: 199 QVFPLPCPQLQNKS 212
V P PCP+L++ S
Sbjct: 422 SVSPEPCPELESSS 435
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 48/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
++ M S I I S++ NSPF T+HP C APNTDGIDPD
Sbjct: 191 IQFMWSRGIEI-SDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNV 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ VAVKSGWD GI +P +NI +R + P +GV IG EMSG I
Sbjct: 250 LIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEMSGGIT 309
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NVTV++ + T GRGG + + RNI ME V++ I I HPDE D
Sbjct: 310 NVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHPDEFYD 369
Query: 148 PKAIPKIRGISFVNVFS---------VNTTKAPICMKNVSLLVLAPSVK----WQCQFVS 194
P A+P + I F ++ + + P+ + + + + K +QC F+
Sbjct: 370 PTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQCSFLQ 429
Query: 195 G-FNGQVFPLPCPQLQNKS 212
G G +FP PC L S
Sbjct: 430 GQVFGTIFPKPCEDLGTSS 448
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 127/265 (47%), Gaps = 48/265 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+ELM+S+ I I SNL NSP IHPVY S +PNTDGI+PD
Sbjct: 200 IELMHSDTIYI-SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHV 258
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI+ PS +I +RR++ +PT + + +G EMSG I
Sbjct: 259 RIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQ 318
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG + ++ R + + +K ++ HPD+ D
Sbjct: 319 DVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYD 378
Query: 148 PKAIPKIRGISFVNVFSVNTTK----------AP---ICMKNVSL-LVLAPSVKWQCQFV 193
P A+P + IS+ +V + K AP IC+ NV+ L + W C +
Sbjct: 379 PNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPWNCADI 438
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSF 218
G + V P PC LQ C F
Sbjct: 439 EGVSANVSPAPCDPLQGAHDGACPF 463
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 120/250 (48%), Gaps = 52/250 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---------CYIE 46
+I++N+ NSPF HP C S APNTDGIDPD CYI
Sbjct: 6 IIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYIS 65
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
G+ +AVKSGWD GIA RPS NI +R V + +G+ IG EMSG I NVTV+
Sbjct: 66 VGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVR 125
Query: 104 --------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIR 155
+ T GRGG I +I RNI + V+ I I N H D+G D A P I
Sbjct: 126 IWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDIT 185
Query: 156 GISF---------VNVFSVNTTKAPICMKNVSLLVLAPSVKW------QCQFVSG-FNGQ 199
ISF V V + ++ PI K++S ++ + + QC F+ G G
Sbjct: 186 NISFKEIHGRGVRVPVRAHGSSDIPI--KDISFQDMSIGISYKKKHIFQCSFIEGRVIGS 243
Query: 200 VFPLPCPQLQ 209
VFP PC L
Sbjct: 244 VFPKPCENLD 253
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 132/273 (48%), Gaps = 67/273 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDP----- 41
V++M S++I +ISN+ +SPF T+HP C APNTDGIDP
Sbjct: 214 VQIMWSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPGKVTC 272
Query: 42 --------------------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
DCYI G+ +A+KSGWD G+A RPS NI +R + +
Sbjct: 273 TLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRS 332
Query: 82 PTCSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKI 130
+GV IG EMSG + NVTV++L T GRGG +++I RN+ + V++
Sbjct: 333 MVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRV 392
Query: 131 PIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVL 182
I I N HPD+G DPKA+P + ISF V + P I +K V+ +
Sbjct: 393 GIVIKTDYNEHPDDGFDPKALPILEDISFTGVHG-QGVRVPVRIHGSEEIPVKKVTFRDM 451
Query: 183 APSVKW------QCQFVSG-FNGQVFPLPCPQL 208
+ + + QC +V G G VFP PC L
Sbjct: 452 SVGITYKKKHIFQCAYVEGRVIGTVFPAPCENL 484
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 51/270 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
+ELM SN + I SNL NSP +HPVYC + +PNTDGIDPD
Sbjct: 150 IELMYSNGVQI-SNLTLLNSPNWNVHPVYCRDVIIRGLTILAPTHSPNTDGIDPDSCSNV 208
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +A+KSGWD GI P+ ++ +R ++ +PT + + +G EMSG I
Sbjct: 209 RIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIALGSEMSGGIQ 268
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKIS---RGSNGHPDE 144
NV +H+ T GRG + NI +R + M+ +K ++ S HPD
Sbjct: 269 NVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMTGYYSSSRVHPDR 328
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTK------------APICMKNVSL-LVLAP-SVKWQC 190
+P+A+P I GI+++++ + N + IC+ NV++ L P + W C
Sbjct: 329 HYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICLSNVTIGLAKKPKEMLWNC 388
Query: 191 QFVSGFNGQVFPLPCPQLQNKSSSWCSFLE 220
+ G V P PC L+ + C F E
Sbjct: 389 TNIEGVASGVTPQPCGFLRESKAMGCPFPE 418
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 133/273 (48%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ I I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDKIQI-SNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNT 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG
Sbjct: 253 RIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEMSGGIQ 312
Query: 96 --RIFNVTVDH------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
R ++T H + T GRGG +++I ++ + M +K ++ H D D
Sbjct: 313 DVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
P A+P+I GI++ +V + N T A IC+ NV++ + A + K W C +
Sbjct: 373 PNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPWACTDI 432
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ +F E+L
Sbjct: 433 EGITSGVTPKPCNSLPDQGPEKIKACDFPQENL 465
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+N+ I S+L NSP +HPVY S +PNTDGI+PD
Sbjct: 192 IEIMHSDNVQI-SSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIE 310
Query: 99 NVTVDH---LDTDK--------GRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + +DT+ GRGG +++I +R++ M+ +K ++ H D D
Sbjct: 311 DVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHADNNYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVS--LLVLAPSVKWQCQFV 193
P A+P I+GI++ ++ + N T A IC+ NV+ L A W C +
Sbjct: 371 PNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDI 430
Query: 194 SGFNGQVFPLPCPQLQNK 211
+G V P PC L ++
Sbjct: 431 AGITSGVVPQPCDLLPDQ 448
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 132/267 (49%), Gaps = 50/267 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I SNL NSP +HP+Y S +PNTDGIDPD
Sbjct: 19 IEIMFSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTNT 77
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI +P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 78 RIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAVIALGSEMSGGIQ 137
Query: 99 NVTVD-----------HLDTDKGRGG--NIENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+V V+ + T GRG +++I ++ + + +K ++ HPD G
Sbjct: 138 DVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMKYVFWMTGSYGSHPDAG 197
Query: 146 RDPKAIPKIRGISFVNVFSVNTT---------KAP---ICMKNVSLLVLA--PSVKWQCQ 191
DPKA+P I GI++ +V + N T AP IC+ NVS+ V ++W C
Sbjct: 198 FDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNVSIQVSEQRKKLQWNCT 257
Query: 192 FVSGFNGQVFPLPCPQLQNKSSSWCSF 218
V+G V P C L K C F
Sbjct: 258 DVAGVTSNVSPNSCQLLPEKGKLGCPF 284
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 49/268 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD----- 42
+E+M S+ + I SNL +SP +HPVYCS PNTDGI+PD
Sbjct: 144 IEIMFSDQVQI-SNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPDSCANV 202
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ +I +RR++ +P + + +G EMSG I
Sbjct: 203 KIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAVIALGSEMSGGIK 262
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + + T GRGG +++I R + M+ +K ++ HPD+ D
Sbjct: 263 NVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMTSDYGSHPDDEWD 322
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLAP-SVKWQCQFV 193
KAIPKI I++ V + N T + IC+ +V++ L P ++W C V
Sbjct: 323 RKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTIRLTQKPKQLQWNCTNV 382
Query: 194 SGFNGQVFPLPCPQL-QNKSSSWCSFLE 220
G QV P C L +K C+F E
Sbjct: 383 EGVTSQVTPQSCDLLPPSKGPLQCTFPE 410
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 122/259 (47%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +S + ++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 176 VEFEDSQYV-VVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHV 234
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G +A+KSGWD GIA RPS NI +RRV + + S + G EMSG I
Sbjct: 235 CIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGIS 294
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+H+ T KGRGG I+ I++ +++ME + S HPD+ D
Sbjct: 295 NVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYD 354
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKN-VSLLVLAPSVKWQCQFVS 194
P A+P ++ I+ NV N A I + N + + S W C VS
Sbjct: 355 PNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWICSDVS 414
Query: 195 GFNGQVFPLPCPQLQNKSS 213
GF+ V P PC L S
Sbjct: 415 GFSESVIPPPCSDLSTPYS 433
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 122/259 (47%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +S + ++SNL F N+P IHPVYCS +P T GI PD
Sbjct: 181 VEFEDSQYV-VVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHV 239
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G +A+KSGWD GIA RPS NI +RRV + + S + G EMSG I
Sbjct: 240 CIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEMSGGIS 299
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV V+H+ T KGRGG I+ I++ +++ME + S HPD+ D
Sbjct: 300 NVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHPDDEYD 359
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKN-VSLLVLAPSVKWQCQFVS 194
P A+P ++ I+ NV N A I + N + + S W C VS
Sbjct: 360 PNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWICSDVS 419
Query: 195 GFNGQVFPLPCPQLQNKSS 213
GF+ V P PC L S
Sbjct: 420 GFSESVIPPPCSDLSTPYS 438
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 52/288 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ I I SNL NSP +HPVY +PNTDGI+PD
Sbjct: 182 IEIMFSDTIQI-SNLTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGINPDSCTNT 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 241 KIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIE 300
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRGG +++I ++ + M +K ++ H D+ D
Sbjct: 301 DVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADKNYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK---WQCQF 192
P A+P I+GI++ ++ + N T A IC+ NV+ + LAP K W C
Sbjct: 361 PNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVT-IGLAPKAKKVPWTCTE 419
Query: 193 VSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNFG-VQMN-CILGM 238
+ G V P PC L ++ + +F E++ VQ C GM
Sbjct: 420 IEGMTSGVSPRPCDLLPDQGPEKITSCDFPPENIPIDLVQFKMCSFGM 467
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 46/263 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+E+M S++I I SNL +SP +HP+Y S +PNTDGI+PD
Sbjct: 192 IEIMFSDHIQI-SNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VA+KSGWD GI PS +I +RR+ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIR 310
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + L T GRG + +I ++ + + +K ++ HP+ D
Sbjct: 311 DVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDFD 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSG 195
PKA+P I GI++ +V + N T + IC+ NV++ +W C + G
Sbjct: 371 PKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIHSGKKKPQWNCTDIEG 430
Query: 196 FNGQVFPLPCPQLQNKSSSWCSF 218
V+P PC L K C +
Sbjct: 431 VTSNVYPKPCELLPLKEKIECPY 453
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 126/258 (48%), Gaps = 51/258 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
V+LM S +I +++N+ NSPF HP C S APNTDGIDPD
Sbjct: 216 VQLMWSKDI-VVTNITLRNSPFWHFHPYDCTNVTVSNVTILSPISGAPNTDGIDPDSCED 274
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
CYI G+ +A+KSGWD GIA R SSNI +R V+ + +G+ IG EMSG +
Sbjct: 275 VLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEMSGGV 334
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
N+TV++ + T GRGG I NI NI + V+ I I N H D+G
Sbjct: 335 ANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHADDGY 394
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
D A P I GISF + + P I +K+++ ++ + + QC +
Sbjct: 395 DRNAFPDITGISFKKIHG-RGVRVPVRAHGSNYIPIKDITFQDMSVGISYKKKHIFQCSY 453
Query: 193 VSG-FNGQVFPLPCPQLQ 209
+ G G VFP PC L
Sbjct: 454 IEGRVIGSVFPKPCENLD 471
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 129/258 (50%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E+M S+ I I SNL NSP +HP+Y S +PNTDGI+PD
Sbjct: 194 IEIMYSDQIQI-SNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNV 252
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+I SG+ +A+KSGWD GI + PS I +RR++ +P + V +G EMSG I
Sbjct: 253 RIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + + GRG +++I ++ + + +K ++ HPD G D
Sbjct: 313 DVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+PKI GI++ +V + N T A IC+ NV++ + A K W C +
Sbjct: 373 PNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDI 432
Query: 194 SGFNGQVFPLPCPQLQNK 211
SG V P PC LQ K
Sbjct: 433 SGVTSNVVPKPCELLQEK 450
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 129/263 (49%), Gaps = 52/263 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VELM S NI +IS++ NSPF +HP C+ APNTDGIDPD
Sbjct: 176 VELMWSTNI-VISDVTLQNSPFWHLHPYDCTNVTISGVTILAPLDAPNTDGIDPDSCKNV 234
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI G+ VAVKSGWD GI RP N+ +R V + +G+ IG EMSG +
Sbjct: 235 LVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGISIGSEMSGGVE 294
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V V+ + T GRGG ++NI+ +N+ + V++ I + HPD D
Sbjct: 295 QVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKTDYGEHPDLDFD 354
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPICM---------------KNVSLLVLAPSVKWQCQF 192
PKA+P + ISF V+ ++ + P+ M NV L +V + C F
Sbjct: 355 PKALPVVANISFDGVYG-SSVRYPVRMFGSKEVPITGIDIRNMNVGLTRKKRNV-FTCDF 412
Query: 193 VSG-FNGQVFPLPCPQLQNKSSS 214
+ G G+VFP PC L + +S
Sbjct: 413 LQGRVVGKVFPSPCKALIREEAS 435
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 133/269 (49%), Gaps = 52/269 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S+ + I SN+ NSP +HP+Y S PNTDGI+PD
Sbjct: 155 IEIMYSDQVQI-SNITLINSPQWHVHPIYSSNLWIQGVTILAPVDVPNTDGINPDSCTNV 213
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSG D GI + P + +RR++ +P + + +G EMSG I
Sbjct: 214 IIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAIALGSEMSGGIE 273
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V ++ + T GRGG +++I +R + ++ +K + + H DEG D
Sbjct: 274 DVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIGSYSSHADEGYD 333
Query: 148 PKAIPKIRGISFVNVFSVNTTK-------------APICMKNVSLLVLAPSVK---WQCQ 191
PKA+P+I I+F ++ + N T IC+ NV+ + LA K W C
Sbjct: 334 PKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVT-MTLAEKHKEPAWNCT 392
Query: 192 FVSGFNGQVFPLPCPQLQNKSSSWCSFLE 220
VSG + V P+PC L KS C F E
Sbjct: 393 DVSGVSSNVTPMPCAALPKKSMD-CPFPE 420
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 127/260 (48%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ I I SNL F +SP IHPVY S +PNTDGI+PD
Sbjct: 184 IELMFSDTIQI-SNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNT 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 243 RIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIE 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG ++NI ++ + + +K ++ H D D
Sbjct: 303 DVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYD 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+P+I GI++ ++ + N + A IC+ N ++ + A K W C V
Sbjct: 363 PHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDV 422
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
G V P PC L + S
Sbjct: 423 EGVTSGVDPKPCDLLDGQES 442
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 127/260 (48%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ I I SNL F +SP IHPVY S +PNTDGI+PD
Sbjct: 184 IELMFSDTIQI-SNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNT 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 243 RIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIE 302
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG ++NI ++ + + +K ++ H D D
Sbjct: 303 DVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYD 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
P A+P+I GI++ ++ + N + A IC+ N ++ + A K W C V
Sbjct: 363 PHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDV 422
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
G V P PC L + S
Sbjct: 423 EGVTSGVDPKPCDLLDGQES 442
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 49/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+ I I SNL F NSP +HPVY S +PNTDGI+PD
Sbjct: 209 IELMFSDKIQI-SNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNT 267
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG
Sbjct: 268 RIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSGGIQ 327
Query: 96 --RIFNVTVDH------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR- 146
R ++T H + T GRGG +++I +R + M +K ++ + +
Sbjct: 328 DVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSYANNSHY 387
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVL--APSVKWQCQF 192
DPKA+P+I+GI++ +V + N T A IC+ NV++ + A W C
Sbjct: 388 DPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEKPWTCTD 447
Query: 193 VSGFNGQVFPLPCPQLQNK 211
+ G V P PC L +K
Sbjct: 448 IEGITSGVTPKPCNSLLDK 466
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 51/269 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S I +ISN+ F NSP +IHPVYCS AP GI PD
Sbjct: 180 VEFVDSEQI-VISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNM 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GIA RP+S+I + R+ + + + G EMSG I
Sbjct: 239 CIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEMSGGIS 298
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ D L T GRGG I + +I +++ME V + I + HPD+ D
Sbjct: 299 DIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFD 358
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV---LAPSVKWQCQF 192
P A+P + I+ N+ + A IC+ N++ + +P+ W C
Sbjct: 359 PAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSN 418
Query: 193 VSGFNGQVFPLPCPQLQNKSS--SWCSFL 219
VSG++ VFP PC LQ +SS S CS L
Sbjct: 419 VSGYSELVFPEPCLDLQTQSSDASVCSTL 447
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 130/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S ++ +ISNL F NSPF IHPVYCS +PNTDGI+PD
Sbjct: 182 VELMYSTSV-VISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ A+ SSNI++ ++G T +G+ IG EMSG I
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG + N+ I ++ M V + I+I+ HPD D
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV ++ A IC+ NVSL V P W C + G
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSV-RPRYPWNCSRIQG 419
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 420 YSNSVTPESCEQLK 433
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 129/269 (47%), Gaps = 51/269 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S I +ISN+ F NSP +IHPVYCS AP GI PD
Sbjct: 180 VEFVDSEQI-VISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNM 238
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GIA RP+S+I + R+ + + + G EMSG I
Sbjct: 239 CIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSEMSGGIS 298
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V D L T GRGG I + +I +++ME V + I + HPD+ D
Sbjct: 299 DVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFD 358
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV---LAPSVKWQCQF 192
P A+P + I+ N+ + A IC+ N++ + +P+ W C
Sbjct: 359 PTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSN 418
Query: 193 VSGFNGQVFPLPCPQLQNKSS--SWCSFL 219
VSG++ VFP PC LQ +SS S CS L
Sbjct: 419 VSGYSELVFPEPCLDLQTQSSDASICSTL 447
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 48/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M SN++ I SNL +SP +HPVY +PNTDGI+PD
Sbjct: 191 IEIMYSNHVQI-SNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKV 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I SG+ +AVKSGWD G P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 250 RIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIK 309
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV + + T GRGG +++I +R + ++ +K I+ HPD+G D
Sbjct: 310 NVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHPDDGWD 369
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLAP-SVKWQCQFV 193
PKA+P I+ I++ ++ + N T + IC+ NV++ L P ++W C V
Sbjct: 370 PKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQWNCTNV 429
Query: 194 SGFNGQVFPLPCPQL 208
+G QV P C L
Sbjct: 430 AGVTSQVTPRSCDLL 444
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 47/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDCY--- 44
+E ++S +I IISNL F +SP IHPV+CS P T GI PD
Sbjct: 197 IEFVDSVDI-IISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDSSRYV 255
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I +G+ V +KSGWD GIA +P+S++ + V + + +G+ G EMSG I
Sbjct: 256 CIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMSGGIS 315
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ + L T KGRGG + I I + ++E + + I ++ S HPD+ D
Sbjct: 316 DIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYD 375
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL-LVLAPSVKWQCQFVS 194
A+P + I+F NV N + A IC+ NV+ L PS W C V
Sbjct: 376 TSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWFCSNVI 435
Query: 195 GFNGQVFPLPCPQLQ 209
GF+ V P PCP LQ
Sbjct: 436 GFSEDVIPEPCPDLQ 450
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 131/264 (49%), Gaps = 55/264 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY--- 44
VE ++S N+ +ISNL N+P I P YCS +P T+GI PD
Sbjct: 207 VEFVSSRNV-VISNLTLLNAPGWNIRPAYCSNVVIQNLTVYTPQDSPFTNGIVPDSSEHV 265
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G + +KSGWD GI+ +P+SN+ +RRV + +GV +G EMSG I
Sbjct: 266 CIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGSEMSGGIS 325
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V+ L T +GRGG I++I+I N+ M+ +++ IK + S+ HPDE D
Sbjct: 326 DVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVGIKATGYSDMHPDEKYD 385
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAP-----------------SVKWQC 190
P ++P + GI+F ++ N + A N + L +P S W C
Sbjct: 386 PSSLPTVSGITFEDIVGTNISIA----GNFTGLSESPFTSICLSNISISISSDPSTPWLC 441
Query: 191 QFVSGFNGQVFPLPCPQLQNKSSS 214
+SG + V P PCP+LQ SS
Sbjct: 442 SNISGSSKNVSPEPCPELQGSFSS 465
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 48/273 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M S++I I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 187 IEIMFSSDIQI-SNLTLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGINPDSCTNT 245
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ VAVKSGWD GI+ P+ + +RR++ +P + + +G EMSG I
Sbjct: 246 KIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 305
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG +++I +R + + +K ++ H D D
Sbjct: 306 DVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHADGNYD 365
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFV 193
A P+I GI++ +V + N T A ICM NV++ + + K W C +
Sbjct: 366 KNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPWTCTDI 425
Query: 194 SGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
G V P PC L ++ + +F +D+
Sbjct: 426 QGITSGVTPTPCGLLPDQGTDKPGGCDFPTDDI 458
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 48/256 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPD----- 42
+E+M S+ + I SNL +SP +HP Y S IAP NTDGI+PD
Sbjct: 184 IEIMYSDQVQI-SNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNV 242
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I SG+ +AVKSGWD GI P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 243 LIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIK 302
Query: 99 NVTVDH---LDTDK--------GRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
NV ++ +D++ GRGG +++I R + M+ +K ++ HPD+G D
Sbjct: 303 NVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWD 362
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLAP-SVKWQCQFV 193
PKA+PKI I++ ++ + N T + IC+ NV + L P ++W C V
Sbjct: 363 PKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNV 422
Query: 194 SGFNGQVFPLPCPQLQ 209
G + QV P C L
Sbjct: 423 EGVSSQVTPPSCDLLH 438
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 130/254 (51%), Gaps = 47/254 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
VELM S ++ +ISNL F NSPF IHPVYCS +PNTDGI+PD
Sbjct: 182 VELMYSTSV-VISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CY+ +G+ ++ +KSGWD GI+ A+ SSNI++ ++G T +G+ IG EMSG I
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V + L T GRGG + N+ I ++ M V + I+I+ HPD D
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P I I+ NV ++ A IC+ NVSL V + W C + G
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRS-RYPWNCSRIQG 419
Query: 196 FNGQVFPLPCPQLQ 209
++ V P C QL+
Sbjct: 420 YSNSVTPESCEQLK 433
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 25/207 (12%)
Query: 24 TIHPVYCSIAPNTDGIDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
T++ V S + ++ I+ DC I G+ +A+KSGWD GIA RP++N+ +RRV+ + +
Sbjct: 43 TLYNVLISDSSDSTCIE-DCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSS 101
Query: 84 CSGVGIGREMSGRIFNVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPI 132
S + G EMSG I NV V+ + T KGRGG I+ III ++ ME +
Sbjct: 102 GSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAF 161
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLL 180
+ HPD+ DP A+P + I+ NV N T A IC+ N+SL
Sbjct: 162 SATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS 221
Query: 181 VLAP-SVKWQCQFVSGFNGQVFPLPCP 206
P S+ W C VSGF+ VFP PCP
Sbjct: 222 TTPPASISWVCSNVSGFSQWVFPEPCP 248
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 47/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDCY--- 44
+E ++S ++ IISNL F +SP IHPVYCS P T GI PD
Sbjct: 242 IEFVDSVDV-IISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFPYTSGIVPDSSQNV 300
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I +G+ + +KSGWD GIA +P+SN+ + V + + +G+ G EMSG I
Sbjct: 301 CIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEMSGGIS 360
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + L T +GRGG + I I + ++E + + I ++ S HPD+ D
Sbjct: 361 VIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYD 420
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL-LVLAPSVKWQCQFVS 194
++P + I+F NV N + A IC+ NV+ L PS W C V
Sbjct: 421 TSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWFCSNVI 480
Query: 195 GFNGQVFPLPCPQLQNKSSSW 215
GF+ V P PCP +Q+ S +
Sbjct: 481 GFSEHVIPEPCPDIQSSYSKF 501
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 48/255 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+NI I SNL +SP IHPVY S +PNTDGI+PD
Sbjct: 194 IELMFSDNIQI-SNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCTNT 252
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CYI SG+ VAVKSGWD GI P+ + +RR++ +P + + +G EMSG
Sbjct: 253 KIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 312
Query: 96 --RIFNVTVDH------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
R ++T H + T GRGG +++I ++ + M +K I+ H D+ +
Sbjct: 313 DVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSHADKNYN 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFV 193
A+P+I+ I + ++ + N + A IC+ NV++ + A + K W C +
Sbjct: 373 HSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQPWTCNDI 432
Query: 194 SGFNGQVFPLPCPQL 208
G V P PC L
Sbjct: 433 EGITSGVTPKPCDLL 447
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPDC--- 43
V++M S++I + +N+ +SPF T+HP C APNTDGIDPD
Sbjct: 208 VQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDSCED 266
Query: 44 ------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
YI G+ +A+KSGWD G RPS NI +R + + +G+ IG EMSG +
Sbjct: 267 MLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSAGISIGSEMSGGV 326
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
N+TV++ + T GRGG + +I RN+ ++ +++ I I N HPD G
Sbjct: 327 SNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHPDGGF 386
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
+P+A P + I++ ++ + P I +KNV+ ++ + + QC +
Sbjct: 387 NPQAFPILENINYTGIYG-QGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQCAY 445
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 446 VEGRVIGTIFPAPCENL 462
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 51/257 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPDC--- 43
V++M S++I + +N+ +SPF T+HP C APNTDGIDPD
Sbjct: 205 VQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDSCED 263
Query: 44 ------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
YI G+ +A+KSGWD G +PS NI +R + + +G+ IG EMSG +
Sbjct: 264 MLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEMSGGV 323
Query: 98 FNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
N+TV++ + T GRGG + +I RN+ ++ +++ I I N HPD G
Sbjct: 324 SNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHPDGGF 383
Query: 147 DPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQF 192
+P+A P + I++ ++ + P I +KNV+ ++ + + QC +
Sbjct: 384 NPQAFPILENINYTGIYG-QGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQCAY 442
Query: 193 VSG-FNGQVFPLPCPQL 208
V G G +FP PC L
Sbjct: 443 VEGRVIGTIFPAPCDNL 459
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 127/258 (49%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E+M S+ I I SNL NSP +HP+Y S PNTDGIDPD
Sbjct: 194 IEIMYSDQIQI-SNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNV 252
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI SG+ +A+KSG D GI + +PS I VRR++ +P + V +G EMSG I
Sbjct: 253 LIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQ 312
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ ++ + T GRG +++I ++ + + +K ++ H + G D
Sbjct: 313 DIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFD 372
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAP--SVKWQCQFV 193
PKA+PKI GI++ ++ + N T A IC+ NV++ + A ++ W C V
Sbjct: 373 PKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDV 432
Query: 194 SGFNGQVFPLPCPQLQNK 211
SG P PC L K
Sbjct: 433 SGVASNAVPKPCDMLPEK 450
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 128/257 (49%), Gaps = 48/257 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S +I +ISNL NSP IHPV+CS AP TDGI PD
Sbjct: 182 VEFVDSEDI-VISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNM 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD+ GI + RP+S+I + RV + + G EMSG I
Sbjct: 241 CIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGIS 300
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ VDHL+ T GRGG I +++I +++ME V + IK + + HPD D
Sbjct: 301 DIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNV--SLLVLAPSVKWQCQFV 193
P A+P I I+ N+ N + A IC+ N+ SL S W C +
Sbjct: 361 PSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNI 420
Query: 194 SGFNGQVFPLPCPQLQN 210
SG++ VFP PCP L +
Sbjct: 421 SGYSELVFPEPCPDLHH 437
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 124/258 (48%), Gaps = 48/258 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S+ I I SNL NSP +HP Y S +PNTDGI+PD
Sbjct: 192 IELLYSHKIQI-SNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI P+ + +RR++ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMSGGIQ 310
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V + + T GRG +++I +R + + +K ++ HPD+G D
Sbjct: 311 DVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPDKGYD 370
Query: 148 PKAIPKIRGISFVNVFSVNTT---------KAP---ICMK--NVSLLVLAPSVKWQCQFV 193
P A+P I I++ ++ + N T K P IC+ N++L ++W C +
Sbjct: 371 PNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQWNCTDI 430
Query: 194 SGFNGQVFPLPCPQLQNK 211
G V P PC L K
Sbjct: 431 EGVTSNVNPRPCSLLPGK 448
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 48/261 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E + S +I +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 173 LEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIETSLDAPLTDGIVPDSCSNL 231
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GI+ RP+S+I + RV + + + + G EMSG I
Sbjct: 232 CIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLLSSSGAALAFGSEMSGGIS 291
Query: 99 NVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ V+HL T GRGG IE +II ++ME V + I+ + + HPD+ D
Sbjct: 292 DIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCSTHPDDSFD 351
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPS--VKWQCQFV 193
+P I ++ N+ N + A IC+ N++ + A + W C V
Sbjct: 352 LSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAADTGSSSWSCSNV 411
Query: 194 SGFNGQVFPLPCPQLQNKSSS 214
SG++ VFP PC +L++ SSS
Sbjct: 412 SGYSEAVFPEPCTELRDPSSS 432
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 128/257 (49%), Gaps = 48/257 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE ++S +I +ISNL NSP IHPV+CS AP TDGI PD
Sbjct: 149 VEFVDSEDI-VISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNM 207
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD+ GI + RP+S+I + RV + + G EMSG I
Sbjct: 208 CIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGIS 267
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ VDHL+ T GRGG I +++I +++ME V + IK + + HPD D
Sbjct: 268 DIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFD 327
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP------------ICMKNV--SLLVLAPSVKWQCQFV 193
P A+P I I+ N+ N + A IC+ N+ SL S W C +
Sbjct: 328 PSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNI 387
Query: 194 SGFNGQVFPLPCPQLQN 210
SG++ VFP PCP L +
Sbjct: 388 SGYSELVFPEPCPDLHH 404
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 51/256 (19%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDPDC---- 43
++M S++I + +N+ +SPF T+HP C APNTDGIDPD
Sbjct: 206 QIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDSCEDM 264
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
YI G+ +A+KSGWD G +PS NI +R + + +G+ IG EMSG +
Sbjct: 265 LIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEMSGGVS 324
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+TV++ + T GRGG + +I RN+ ++ +++ I I N HPD G +
Sbjct: 325 NITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHPDGGFN 384
Query: 148 PKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQFV 193
P+A P + I++ ++ + P I +KNV+ ++ + + QC +V
Sbjct: 385 PQAFPILENINYTGIYG-QGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQCAYV 443
Query: 194 SG-FNGQVFPLPCPQL 208
G G +FP PC L
Sbjct: 444 EGRVIGTIFPAPCDNL 459
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 48/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S +ILI SNL F N+P IHPVYCS +P G+ PD
Sbjct: 177 IEFVSSKHILI-SNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNV 235
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ V++KSGWD GI RP++ + +R +S +PT +G+ G EMSG I
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEMSGGIS 295
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV+ L+ T +GRGG I NI I ++ + V I + + HPD+ D
Sbjct: 296 DVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 355
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + I N V+ A IC+ ++ L + S W C VSG
Sbjct: 356 WDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHSDS--WICSNVSG 413
Query: 196 FNGQVFPLPCPQLQNKSSS 214
F+ V P PC +L + SS
Sbjct: 414 FSDDVSPEPCQELMSSPSS 432
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 131/260 (50%), Gaps = 48/260 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
VE ++S I +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 182 VEFLHSEEI-VISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GI++ +P+S+I + R+ + + + G EMSG I
Sbjct: 241 VIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGIS 300
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ D++ T GRGG I+ ++I ++KM+ V + I+ + + HPDE D
Sbjct: 301 DIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFD 360
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV--LAPSVKWQCQFV 193
P +P I I+ ++ N + A IC+ NV+ L+ A S W C V
Sbjct: 361 PSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNV 420
Query: 194 SGFNGQVFPLPCPQLQNKSS 213
SG++ VFP PC +L SS
Sbjct: 421 SGYSESVFPEPCSELHTPSS 440
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 49/262 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S N+ I+SNL F N+P TIH +Y S +P T GI PD
Sbjct: 182 IEFLSSKNV-IVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G +++KSGWD GIA +RP+ N+ +R V + S + G EMSG I
Sbjct: 241 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 300
Query: 99 NVTVD--HLD---------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V VD H+ T KGRGG I+ I I NI M R+ I ++ GS G HPD+
Sbjct: 301 DVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAI-VANGSFGSHPDDKY 359
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL-LVLAPSVKWQCQFV 193
D A+P + I N+ N A + + N++L SV WQC +V
Sbjct: 360 DANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSWQCSYV 419
Query: 194 SGFNGQVFPLPCPQLQNKSSSW 215
G + V P PCP+L+ ++
Sbjct: 420 YGSSESVIPEPCPELKRDDDAY 441
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S +ILI SNL F N+P IHPVYCS +P+ G+ PD
Sbjct: 177 IEFVSSKHILI-SNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNV 235
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ V++KSGWD GI RP++ + +R + +PT +G+ G EMSG +
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVS 295
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV+ L+ T +GRGG I NI I ++ + V I + + HPD+ D
Sbjct: 296 DVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSHPDDKFD 355
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + I N V+ A IC+ ++ L + W C VSG
Sbjct: 356 RDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEE-SWICSNVSG 414
Query: 196 FNGQVFPLPCPQLQNKSSS 214
F+ V P PC +L + SS
Sbjct: 415 FSDDVSPEPCQELMSSPSS 433
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S +ILI SNL F N+P IHPVYCS +P+ G+ PD
Sbjct: 177 IEFVSSKHILI-SNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNV 235
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ V++KSGWD GI RP++ + +R + +PT +G+ G EMSG +
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVS 295
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV+ L+ T +GRGG I NI I ++ + V I + + HPD+ D
Sbjct: 296 DVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 355
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + I N V+ A IC+ ++ L + W C VSG
Sbjct: 356 RDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEE-SWICSNVSG 414
Query: 196 FNGQVFPLPCPQLQNKSSS 214
F+ V P PC +L + SS
Sbjct: 415 FSDDVSPEPCQELMSSPSS 433
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 47/259 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S +ILI SNL F N+P IHPVYCS +P+ G+ PD
Sbjct: 179 IEFVSSKHILI-SNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNV 237
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ V++KSGWD GI RP++ + +R + +PT +G+ G EMSG +
Sbjct: 238 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVS 297
Query: 99 NVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV+ L+ T +GRGG I NI I ++ + V I + + HPD+ D
Sbjct: 298 DVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 357
Query: 148 PKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVKWQCQFVSG 195
A+P + I N V+ A IC+ ++ L + W C VSG
Sbjct: 358 RDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEE-SWICSNVSG 416
Query: 196 FNGQVFPLPCPQLQNKSSS 214
F+ V P PC +L + SS
Sbjct: 417 FSDDVSPEPCQELMSSPSS 435
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 36/194 (18%)
Query: 37 DGIDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGV 87
DGIDPD YI +G+ LVAVKSGWD GI ARPS++I +RR++G++P +G+
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSP-FAGI 59
Query: 88 GIGREMSGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR 136
IG E SG ++NV + HL T+ GRGG I NI + ++ M V+ IKIS
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 137 GSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSL---LV 181
HPD+ +P A+P ++ + NV+ +A IC+ N++L ++
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 182 LAPSVKWQCQFVSG 195
+V W+C +VSG
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 127/264 (48%), Gaps = 51/264 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY--- 44
VE ++S N+ I+SNL F N+P TIH VYCS +P T GI PD
Sbjct: 180 VEFVSSGNV-IVSNLTFLNAPAYTIHSVYCSNLYIHRVTANTSPESPYTIGIVPDSSENV 238
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G +++KSGWD GI+ ARP++N+ ++ V + S + G EMSG I
Sbjct: 239 CIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSEMSGGIS 298
Query: 99 NVTV--DHLD---------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V V H+ T GRGG I+ I I NI M V ++ GS G HPD G
Sbjct: 299 DVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAF-LANGSFGTHPDSGF 357
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVL---APSVKWQCQ 191
D A P + I ++ N + A I + N+SL + +P+ WQC
Sbjct: 358 DANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLSIKNSDSPADFWQCS 417
Query: 192 FVSGFNGQVFPLPCPQLQNKSSSW 215
+V G + V P PC +L++ SS+
Sbjct: 418 YVDGSSEFVVPEPCLELKSFDSSY 441
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 26/199 (13%)
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G T SG+ G EMSG I V
Sbjct: 21 CYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRA 80
Query: 103 DHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAI 151
L T GRGG +EN+ I ++ M+ V + I+I+ HPD+ D A+
Sbjct: 81 VGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTAL 140
Query: 152 PKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQ 199
P I I+ +V VN A IC+ NVSL V + W C + G++
Sbjct: 141 PVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEGYSNS 199
Query: 200 VFPLPCPQLQN--KSSSWC 216
V P C QL++ + +S C
Sbjct: 200 VIPESCEQLRSNCRQTSIC 218
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 107/225 (47%), Gaps = 34/225 (15%)
Query: 36 TDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 86
TDGI+PD CYI SG+ VAVKSGWD GIA P+ + +RR++ +P +
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 87 VGIGREMSGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ +G EMSG I +V + + T GRG I++I ++ + M +K K+
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 136 RGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA 183
HPD DP A+P I+ I++ ++ + N + A ICM NV+L + A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 184 PSVK--WQCQFVSGFNGQVFPLPCPQLQNKSSSWCSFLEFSGEDL 226
K W C V G V P PC L ++ S +F L
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISACDFPANSL 225
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 125/262 (47%), Gaps = 49/262 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S N+ I+SNL F N+P +I+ +Y S +P T GI PD
Sbjct: 182 IEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYV 240
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G +++KSGWD GIA +RP+ N+ +R V + S + G EMSG I
Sbjct: 241 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 300
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V VD+ T KGRGG I+ I I NI M R+ I ++ GS G HPD+
Sbjct: 301 DVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAI-VANGSFGSHPDDKY 359
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNV-SLLVLAPSVKWQCQFV 193
D A+P + I N+ N A + + NV + SV WQC +V
Sbjct: 360 DVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYV 419
Query: 194 SGFNGQVFPLPCPQLQNKSSSW 215
G + V P PCP+L+ + ++
Sbjct: 420 YGSSESVIPEPCPELKRDADAY 441
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 125/262 (47%), Gaps = 49/262 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S N+ I+SNL F N+P +I+ +Y S +P T GI PD
Sbjct: 113 IEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYV 171
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G +++KSGWD GIA +RP+ N+ +R V + S + G EMSG I
Sbjct: 172 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 231
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V VD+ T KGRGG I+ I I NI M R+ I ++ GS G HPD+
Sbjct: 232 DVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAI-VANGSFGSHPDDKY 290
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNV-SLLVLAPSVKWQCQFV 193
D A+P + I N+ N A + + NV + SV WQC +V
Sbjct: 291 DVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYV 350
Query: 194 SGFNGQVFPLPCPQLQNKSSSW 215
G + V P PCP+L+ + ++
Sbjct: 351 YGSSESVIPEPCPELKRDADAY 372
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 125/262 (47%), Gaps = 49/262 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
+E ++S N+ I+SNL F N+P +I+ +Y S +P T GI PD
Sbjct: 113 IEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYV 171
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G +++KSGWD GIA +RP+ N+ +R V + S + G EMSG I
Sbjct: 172 CIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGIS 231
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V VD+ T KGRGG I+ I I NI M R+ I ++ GS G HPD+
Sbjct: 232 DVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAI-VANGSFGSHPDDKY 290
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNV-SLLVLAPSVKWQCQFV 193
D A+P + I N+ N A + + NV + SV WQC +V
Sbjct: 291 DVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYV 350
Query: 194 SGFNGQVFPLPCPQLQNKSSSW 215
G + V P PCP+L+ + ++
Sbjct: 351 YGSSESVIPEPCPELKRDADAY 372
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 97/168 (57%), Gaps = 35/168 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE MNS I IISN+ F NSPF I PVYCS +PNTDGIDPD
Sbjct: 47 VEFMNSRGI-IISNVIFKNSPFWNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNV 105
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+I +G+ LVAVKSGWD GI RPSS+I +RRV+G++P +G+ +G E SG +
Sbjct: 106 CIEDSFISTGDDLVAVKSGWDEYGIGYGRPSSHITIRRVTGSSP-FAGIAVGSETSGGVE 164
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+V + ++ T+ GRGG I+NI + + ME V+ IKI+
Sbjct: 165 HVLAENIVIYNSGIGVNIKTNIGRGGFIKNITVSPVFMENVRTGIKIA 212
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 126/264 (47%), Gaps = 51/264 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +++ N+ I+SNL F N+P TIH VYC +P T GI PD
Sbjct: 180 VEFVSAENV-IVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENV 238
Query: 43 CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C ES G +++KSG D G++ ARP++N+ +R V + S + G EMSG I
Sbjct: 239 CIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGIS 298
Query: 99 NVTVD--HLD---------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V V H+ T GRGG I+ I I NI M V ++ GS G HPD G
Sbjct: 299 DVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAF-LANGSFGTHPDSGF 357
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV---LAPSVKWQCQ 191
D A P + I ++ N + A I + N+SL + +P+ WQC
Sbjct: 358 DENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADSWQCS 417
Query: 192 FVSGFNGQVFPLPCPQLQNKSSSW 215
+V G + V P PC +L++ S +
Sbjct: 418 YVDGSSEFVVPEPCLELKSFDSYY 441
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 126/264 (47%), Gaps = 51/264 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
VE +++ N+ I+SNL F N+P TIH VYC +P T GI PD
Sbjct: 182 VEFVSAENV-IVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPYTIGIVPDSSENV 240
Query: 43 CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C ES G +++KSG D G++ ARP++N+ +R V + S + G EMSG I
Sbjct: 241 CIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEMSGGIS 300
Query: 99 NVTVD--HLD---------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG-HPDEGR 146
+V V H+ T GRGG I+ I I NI M V ++ GS G HPD G
Sbjct: 301 DVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAF-LANGSFGTHPDSGF 359
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLV---LAPSVKWQCQ 191
D A P + I ++ N + A I + N+SL + +P+ WQC
Sbjct: 360 DENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADSWQCS 419
Query: 192 FVSGFNGQVFPLPCPQLQNKSSSW 215
+V G + V P PC +L++ S +
Sbjct: 420 YVDGSSEFVVPEPCLELKSFDSYY 443
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 34/209 (16%)
Query: 37 DGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGV 87
DGI+PD CYI SG+ VAVKSGWD GIA P+ + +RR++ +PT + +
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 88 GIGREMSGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR 136
+G EMSG I +V + + T GRGG +++I ++ + M +K ++
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 137 GSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSL-LVLA 183
H D DP A+P I+ I++ ++ + N T A IC+ NV++ L
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 184 P-SVKWQCQFVSGFNGQVFPLPCPQLQNK 211
P ++W C +SG + V P PC L N+
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNALPNQ 209
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 36 TDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 86
TDG+DPD +I SG+ VAVKSGWD GI+ P+ + +RR++ +P +
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 87 VGIGREMSGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ +G EMSG I +V + + T GRGG +++I +R +KM +K +
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 136 RGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLA 183
HPD DPKA P I GI++ ++ + N T IC+ N + + +A
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNAT-ITMA 179
Query: 184 PSVK---WQCQFVSGFNGQVFPLPCPQLQNKSSSWCSFLEFS 222
P K W C + G V P PC L ++++ C F E S
Sbjct: 180 PESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT-CHFPERS 220
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 27/198 (13%)
Query: 37 DGIDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
D + +CYI G+ +A+KSGWD GIA RPSS+I +R V+ + +G+ IG EMSG
Sbjct: 92 DVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEMSGG 151
Query: 97 IFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+ NVTV++ + T GRGG I NI RNI + V+ I I N H D+G
Sbjct: 152 VANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHADDG 211
Query: 146 RDPKAIPKIRGISFVNVFSVNTTKAP--------ICMKNVSLLVLAPSVKW------QCQ 191
D A P I ISF + + P I +K++S ++ + + QC
Sbjct: 212 YDRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKHIFQCS 270
Query: 192 FVSGFNGQ-VFPLPCPQL 208
++ G + VFP PC L
Sbjct: 271 YLEGRVIRPVFPKPCENL 288
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 49/251 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDPD---- 42
VELM + +I+++ N+ NSPF TIHP Y S +PNTDG DPD
Sbjct: 195 VELMYTTDIMLV-NVELRNSPFWTIHP-YSSTNVLVSNVTINNPLDSPNTDGCDPDSCNQ 252
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
C G+ +AVKSGWD+ GI P++++ +R ++ TPT + + IG EMSG +
Sbjct: 253 VVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAIAIGSEMSGGV 312
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
N+ L + +GRGG + N+ + + VK + I+ H
Sbjct: 313 SNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSINDFYGQHESIFY 372
Query: 147 DPKAIPKIRGISFVNVFSVNTT------------KAPICMKNVSLLVLAPSVKWQCQFVS 194
DP A+P I I N+ T + + NVSL V+ S + C + +
Sbjct: 373 DPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVSLAVVG-SGSYTCSYAT 431
Query: 195 GFNGQVFPLPC 205
G V P+ C
Sbjct: 432 GTQHAVVPVLC 442
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 109/249 (43%), Gaps = 79/249 (31%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S NI I SN+ +SP IHPVYC+ PNTDGI+PD
Sbjct: 185 IEILFSKNIQI-SNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNT 243
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GI A
Sbjct: 244 LIEDCYIVSGDDCIAVKSGWDQYGIKTAV------------------------------- 272
Query: 99 NVTVDHLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGIS 158
GRG +++I R I M+ +K +S HPDEG DPKA+P+I I+
Sbjct: 273 -----------GRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNIN 321
Query: 159 FVNVFSVNTT---------KAP---ICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLP 204
+ ++ + N T K P IC+ NV++ + A + K W C V+G +V P P
Sbjct: 322 YRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEP 381
Query: 205 CPQLQNKSS 213
C L K +
Sbjct: 382 CSLLPEKKA 390
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 25/194 (12%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
D I + +++KSGWD+ GI + RP+S+I + RV + + G EMSG I ++
Sbjct: 152 DSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGISDIH 211
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
VDHL+ T GRGG I +++I +++ME V + IK + + HPD DP A
Sbjct: 212 VDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFDPSA 271
Query: 151 IPKIRGISFVNVFSVNTTKAP------------ICMKNV--SLLVLAPSVKWQCQFVSGF 196
+P I I+ N+ N + A IC+ N+ SL S W C +SG+
Sbjct: 272 LPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNISGY 331
Query: 197 NGQVFPLPCPQLQN 210
+ VFP PCP L +
Sbjct: 332 SELVFPEPCPDLHH 345
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 55/238 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M+S+N+ I S+L NSP +HPVY S +PNTDGI+PD
Sbjct: 192 IEIMHSDNVQI-SSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNT 250
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
CYI SG+ +AVKSGWD GIA P+ + +RR++ +P + + +G EMSG I
Sbjct: 251 RIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIE 310
Query: 99 NVTVDH---LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIR 155
+V + +DT+ G I R++ E V + ++ G +G P G
Sbjct: 311 DVRAEDILAIDTESGVRIKTAGINYRDMVAENVTMAGRL-EGISGDPFTG---------- 359
Query: 156 GISFVNVFSVNTTKAPICMKNVS--LLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNK 211
IC+ NV+ L A W C ++G V P PC L ++
Sbjct: 360 ----------------ICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQ 401
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 91/177 (51%), Gaps = 27/177 (15%)
Query: 58 WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL-----------D 106
WD GI+ RPS+NI +R + + +G+ IG EMSG + NVTV++L
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 107 TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVN 166
T GRGG +++I RNI E V++ I I N HPDEG D KA P ++ ISF+ V
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHG-Q 119
Query: 167 TTKAP--------ICMKNVSLLVLAPSVKW------QCQFVSG-FNGQVFPLPCPQL 208
+ P I ++NV+ ++ + + QC FV G G +FP PC L
Sbjct: 120 GVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCENL 176
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 12/132 (9%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG EMSG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSEMSGGIRDIL 60
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+++ T+ GRGG I NI +I ++ V IK S + HPD +P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 151 IPKIRGISFVNV 162
+P + I+ +NV
Sbjct: 121 LPVVGDIAVLNV 132
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 44/242 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
L +S+L +SPF T+HPVY +PNTDG+DPD CY +
Sbjct: 218 LEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNPPYSPNTDGVDPDSTRDVVIRDCYFST 277
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ VA+KSGWD G + S+NI + +P +G+ +G EMSG I NV +
Sbjct: 278 GDDSVAIKSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGSEMSGGIANVFARNITM 337
Query: 105 --------LDTDKGRGGNIENIIIRNIKMER-VKIPIKISRGSNGHPDEGRDPKAIPKIR 155
+ T GRGG + N+ + ++ +E +++ + + GHP G +P A P +
Sbjct: 338 TGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYGGHP-AGYNPLATPHVY 396
Query: 156 GISFVNVFSVNTTKAP--ICMKNVSLLVL-------APSVKWQCQFVSGFNGQVFPLPCP 206
IS +N N T+ + + N L W C +SG V P CP
Sbjct: 397 NISLINARGGNNTQIAELVGLPNSQFRALRFQNVHITGKQGWTCSDISGTAQNVTPAACP 456
Query: 207 QL 208
L
Sbjct: 457 SL 458
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 23/122 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDP------ 41
+EL+ S NI IISN+ F N+P+ +HP YC+ +PNTDGIDP
Sbjct: 94 LELLYSENI-IISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGIDPKSSSRV 152
Query: 42 ---DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DCYI SG+ VAVKSGWD GI PS +I ++R++ +PT + + + EMSG I
Sbjct: 153 KIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIALSSEMSGGIR 212
Query: 99 NV 100
+V
Sbjct: 213 DV 214
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+++ T+ GRGG I NI +I ++ V IK S + HPD +P A
Sbjct: 61 VENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 151 IPKIRGISFVNV 162
+P + I+ +NV
Sbjct: 121 LPVVGDIAVLNV 132
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+++ T+ GRGG I NI +I ++ V IK S + HPD +P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 151 IPKIRGISFVNV 162
+P + I+ +NV
Sbjct: 121 LPVVGDIAVLNV 132
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA 150
V+++ T+ GRGG I NI +I ++ V IK S + HPD +P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 151 IPKIRGISFVNV 162
+P + I+ ++V
Sbjct: 121 LPVVGDIAVLDV 132
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 62/258 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPDCYIES 47
+++M ++ L ISN+ NSP +HPVYCS IAP NTDGI+P ++ S
Sbjct: 197 IDIMYTDQ-LQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEVPNTDGINPSRFLAS 255
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
H + S++ A G+ +G EMSG I NV V+
Sbjct: 256 SF----------HQYLNFPLISTSDA------------GIALGSEMSGGIENVRVEDITA 293
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T GRGG +++I +R + ++ +K IS HPD+G DP A+ +I+
Sbjct: 294 FTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNYKTHPDDGFDPNALAEIKN 353
Query: 157 ISFVNVFSVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFP 202
I++ ++ + N + ICM NV++ + K W C V G + V P
Sbjct: 354 INYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPKKPQWNCSNVEGVSSHVTP 413
Query: 203 LPCPQLQNKSSSWCSFLE 220
PC K C+F E
Sbjct: 414 TPCSLFPEKPVD-CTFPE 430
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 23/117 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
+ELM+S+ I I SNL NSP IHPVY S +PNTDGI+PD
Sbjct: 193 IELMHSDTIYI-SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHV 251
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 95
CYI SG+ VA+KSGWD GI+ PS +I +RR++ +PT + + +G EMSG
Sbjct: 252 RIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSG 308
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 123/286 (43%), Gaps = 67/286 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
VE M S+ I + NL NSPF T H C +PNTDG DPD
Sbjct: 157 VEFMYSSRIRMY-NLRLQNSPFWTNHFYDCDDVHVQNVHVKAPWSSPNTDGWDPDSSRNV 215
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
G+ VA+KSGWD GI PS NI +R V+ P +G+ IG EMSG +
Sbjct: 216 LIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGP-YAGIAIGTEMSGGVR 274
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKM-----ERVKIPIKISRGS-NGH 141
NVTV+ ++ T RGG + +++ +NI++ + + + + + N
Sbjct: 275 NVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQAIHVDMYHYHNTPNPS 334
Query: 142 PDEGRDPKAIPKIRGISFVN------------VFS-VNTTKAPI---CMKNVSLLVLAPS 185
P +P +R + F N VF V ++PI ++N+S S
Sbjct: 335 CSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEYVFLENISFPTPVSS 394
Query: 186 VKWQCQFVSGF--NGQVFPL-PCPQLQNKS-------SSWCSFLEF 221
+ W C V G N V P PCP+ + + S W +FL F
Sbjct: 395 LGWNCSNVQGSVKNNSVTPWPPCPEFPSVTVENSETMSPWNAFLTF 440
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 92/193 (47%), Gaps = 35/193 (18%)
Query: 12 ISNLAFCNSPFRTIHPVYC--------SI-----APNTDGIDPDC---------YIESGN 49
I++L NSP T+HPVYC SI +PNTDGIDPDC YI+ G+
Sbjct: 169 IADLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGD 228
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+ +KSG++ G P NI + + S VGIG EMSG I NVTV +
Sbjct: 229 DCITLKSGYNEHGRKKGIPCENIVISNCTFAHGR-SAVGIGSEMSGGIKNVTVMNCVFKG 287
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD-PKAIPKIRGI 157
+ T +GRGG +ENI I ME ++ I I G G + ++ P + I
Sbjct: 288 TLRGLRVKTGRGRGGTVENIFASGIIMENLREGISIDMGYEGVSGKIYPVTESTPFFKNI 347
Query: 158 SFVNVFSVNTTKA 170
F ++ N +A
Sbjct: 348 RFKDIIGTNVEQA 360
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 678 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 736
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 737 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 795
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 796 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 835
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 695 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 753
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 754 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 812
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 813 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 697 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 755
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 756 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 814
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 815 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 854
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 695 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 753
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 754 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 812
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 813 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 695 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 753
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 754 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 812
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 813 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 33/160 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ M + IL+ + NSPF TIHPVYC S PN DG DP+
Sbjct: 695 IQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDSHYPNNDGCDPESTSNVLI 753
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMSG + N+
Sbjct: 754 EECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMSGGVENI 812
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D + +++ RGG I NI + NI +ER K
Sbjct: 813 YMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 51/254 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E++ S + I L +SP +HP+Y PNTDGI+PD
Sbjct: 177 IEIVFSYQVQITXTL--IDSPSWNVHPIYSRNVIIQGLTIIAPVTVPNTDGINPDSCTNI 234
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
CYI SG+ +AVKS + +G+ P+ + +RR++ +P + + +GREM+G
Sbjct: 235 RVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAVIALGREMAGXMN 294
Query: 96 -RIFNVT-VD-----HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
R ++T +D + T RGG +++I +R + M+ ++ I P G +
Sbjct: 295 VRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPGHEG 354
Query: 149 KAIPKIRGISFVNVFSVNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFVS 194
P I GI++ ++ + N T C+ NV++ + S K W C V
Sbjct: 355 ---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQ 411
Query: 195 GFNGQVFPLPCPQL 208
G +V P PC L
Sbjct: 412 GITSRVTPQPCDLL 425
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 88/183 (48%), Gaps = 38/183 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++I + NSPF ++PV C S+ PN+DG DP DCY ++G+
Sbjct: 251 VLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDSMGPNSDGCDPESCDRVLIEDCYFDTGD 310
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG +HDG + RPS NI +R GV IG EMSG + NV V+H
Sbjct: 311 DCIAIKSGRNHDGRRINRPSQNIVIRNCH-MRRGHGGVVIGSEMSGGVRNVFVEHCEMNS 369
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG +EN R+I + VK I I + +EG + P +R
Sbjct: 370 PDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVI----DFQYEEGDAGEHTPIVRN 425
Query: 157 ISF 159
I F
Sbjct: 426 IDF 428
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 96/206 (46%), Gaps = 41/206 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY--- 44
+E ++S NILI + NSP TIHPVYC + NTDG+DPD
Sbjct: 289 IEFLHSQNILI-QGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGM 347
Query: 45 ------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
G+ +A+KSG D +G + PS NI VR GV IG EMSG +
Sbjct: 348 QIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNG--HGVSIGSEMSGGVQ 405
Query: 99 NVTVDHLDTD-----------KGRGGNIENIIIRNIKMERVKIP---IKISRGSNGHP-D 143
NV V++ D D +GRGG ++NI ++ M ++ I + SNG
Sbjct: 406 NVLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALP 465
Query: 144 EGRDPKAIPKIRGISFVNVFSVNTTK 169
G A P IR ++F N+ +VN K
Sbjct: 466 PGPVTDATPAIRNLNFDNI-TVNGAK 490
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--------- 106
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 107 --TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFS 164
T GRGG + ++ I N+ M+ V + I + HPD+ DP A+P I+ I+F ++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 165 VNTTKA 170
A
Sbjct: 121 XEIKTA 126
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--------- 106
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 107 --TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
T GRGG + ++ I N+ M+ V + I + HPD+ DP A+P I+ I+F ++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDI 118
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------H 104
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
+ T GRGG ++++ I N+ M+ V + I + HPD+ DP A+P I+ I+F ++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDI 118
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------H 104
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
+ T GRGG ++++ I N+ M+ V + I + HPD+ DP A+P I+ I+F ++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDI 118
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------H 104
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
+ T GRGG ++++ I N+ M+ V + I + HPD+ DP A+P I+ I+F ++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDI 118
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 34/148 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+E+M SN++ I SNL +SP +HPVY +PNTDGI+PD
Sbjct: 191 IEIMYSNHVQI-SNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDSCKKV 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C+I SG+ +AVKSGWD G P+ ++ +RR++ +P + + +G EMSG I
Sbjct: 250 RIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMSGGIK 309
Query: 99 NVTVD-----------HLDTDKGRGGNI 115
NV + + T GRGG I
Sbjct: 310 NVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 23/142 (16%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E + S +I +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 183 LEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNL 241
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GI+ RP+S+I + RV + + + + G EMSG I
Sbjct: 242 CIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGIS 301
Query: 99 NVTVDHLDTDKGRGGNIENIII 120
++ V+HL G E +++
Sbjct: 302 DIHVNHLRIHDSSKGPPEEVLV 323
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 23/125 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+EL+ S+NI IISNL F NSP +IHPVYCS P T GI PD
Sbjct: 63 IELVGSDNI-IISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHV 121
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I +G+ + +KSGWD G+A +P+SN+ +R V + + +G+ G EMSG I
Sbjct: 122 CIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGIS 181
Query: 99 NVTVD 103
++ +
Sbjct: 182 DIIAE 186
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 56 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--------- 106
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 107 --TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
T GRGG + ++ I N+ M+ V + I + HPD+ DP A+ I+ I+F ++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDI 118
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 32/151 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + +SPF TIHPVYC S PN DG DP+ C +G+
Sbjct: 208 VLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDSHFPNNDGCDPESTTNVLIENCTFRTGD 267
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--- 106
+A+KSG D DG + RPS NI +R + C+G+ IG EMSG +V +++++
Sbjct: 268 DAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHS-ECNGLCIGSEMSGGASDVYMNNIEIGT 326
Query: 107 --------TDKGRGGNIENIIIRNIKMERVK 129
+++ RGG I N+++ +I +ER K
Sbjct: 327 VKNAIYFKSNRDRGGYIRNVVVDSITVERAK 357
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 38/186 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
+++ ++ N+PF +HPV C S+ PN+DG +P+ C+ ++G+
Sbjct: 227 VLLEDVTIINAPFWLVHPVLCDNVTARRLHLQSLGPNSDGCNPESCRNVLIEHCFFDTGD 286
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG + DG + PS NI +R GV IG E+SG + NV
Sbjct: 287 DCIAIKSGRNADGRRLNIPSENIVIRHCE-MRAGHGGVVIGSEISGGVRNVYAHDNRMSS 345
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IENI +R+I++ +VK I I N H +EG K P +R
Sbjct: 346 PDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVI----NFHYEEGDAGKFDPTVRN 401
Query: 157 ISFVNV 162
I+ N+
Sbjct: 402 INLDNI 407
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 23/127 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
+E + S +I +ISNL F NSP +IHPVYCS AP TDGI PD
Sbjct: 183 LEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNL 241
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I + +++KSGWD GI+ RP+S+I + RV + + + + G EMSG I
Sbjct: 242 CIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGIS 301
Query: 99 NVTVDHL 105
++ V+HL
Sbjct: 302 DIHVNHL 308
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC---------YIESGN 49
++I + NSPF +HPV C S PN DG DP+C ++G+
Sbjct: 251 VLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRSHGPNNDGCDPECCDHVVIEGCTFDTGD 310
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + + N+ VR G+ +G E+SG ++NV +D+
Sbjct: 311 DCIAIKSGRNEDGRRVGQACRNLVVRNCQ-MKDGHGGLVLGSEISGGVYNVFLDNCQMDS 369
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IE I IRN+++ VK + I N +EG++ + +P++R
Sbjct: 370 PELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSI----NFFYEEGQEGRFLPEVRD 425
Query: 157 ISFVNVFSVNTTKA 170
I N+ + +A
Sbjct: 426 IHIDNLVVRSAQRA 439
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
++LM+ + ++ + NSPF H VYC S PN DG+D
Sbjct: 166 LQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNV 224
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +G I
Sbjct: 225 RISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETAGGIR 283
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR- 146
NVT+ + + T++ RGG +EN+ I NI ME V P+ I+ DE
Sbjct: 284 NVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNP 343
Query: 147 ---DPKAIPKIRGISFVNVFSVNTTKA 170
P+A+P G + ++ A
Sbjct: 344 LLTSPEAVPVTEGTPVIRHIQISDVTA 370
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
++LM+ + ++ + NSPF H VYC S PN DG+D
Sbjct: 167 LQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNV 225
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +G I
Sbjct: 226 RISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETAGGIR 284
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR- 146
NVT+ + + T++ RGG +EN+ I NI ME V P+ I+ DE
Sbjct: 285 NVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNP 344
Query: 147 ---DPKAIPKIRGISFVNVFSVNTTKA 170
P+A+P G + ++ A
Sbjct: 345 LLTSPEAVPVTEGTPVIRHIQISDVTA 371
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 43/211 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC---SIA-------------PNTDGIDPDCY 44
++L+N + +LI + NSP TIHP+Y +IA PNTDG+DPD
Sbjct: 322 IQLINCDGVLI-QGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDGLDPDSV 380
Query: 45 ---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 95
+ G+ +A+KSG D +G + PSSNI +R S GV +G EMSG
Sbjct: 381 DNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRN-SLMLHGHGGVTLGSEMSG 439
Query: 96 RIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVK---IPIKISRGSNGH 141
I N+ + L T +GRGG I++++ NI M+ + I + SNG
Sbjct: 440 GINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSSNGA 499
Query: 142 --PDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
P G + P I+ + F N+ ++ +A
Sbjct: 500 PLPYTGVVDETTPTIKNLVFKNITAIGAKEA 530
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 25/143 (17%)
Query: 93 MSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
MSG I ++ V+HL T GRGG IE+++I ++ME V + I+ + + H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 142 PDEGRDPKAIPKIRGISFVNVFSVNTTKA------------PICMKNVSLLVLAPS--VK 187
PD+ DP +P I ++ N+ N + A IC+ N++ + A S
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 188 WQCQFVSGFNGQVFPLPCPQLQN 210
W C VSG++ VFP PC +L++
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRD 143
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
++LM+ + ++ + NSPF H VYC S PN DG+D
Sbjct: 167 LQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNV 225
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +G I
Sbjct: 226 RISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETAGGIR 284
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR- 146
NVT+ + + T++ RGG +EN+ I NI ME V P+ I+ DE
Sbjct: 285 NVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNP 344
Query: 147 ---DPKAIPKIRGISFVNVFSVNTTKA 170
P+A+P G + ++ A
Sbjct: 345 LLTSPEAVPVTEGTPVIRHIQISDVTA 371
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 40/238 (16%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIAPNTDGIDPDCYIESGNGLVAVKSGWDH 60
+E+ +S N+ I SN+ +SP +IHPVYC G+ I+S N
Sbjct: 189 IEIQSSENVQI-SNINLIDSPMWSIHPVYCRNVI-IKGVKISNPIDSANT---------- 236
Query: 61 DGI-AMARPSSNIAVRRVSGTTPTCSGVGIGREMSG-----RIFNVTVDH------LDTD 108
DGI + RP + +RR S P +G+ +G EMSG R+ +VT+ + ++T
Sbjct: 237 DGINPVGRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETA 296
Query: 109 KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTT 168
GRGG ++N+ R ++ K ++ P +G PKA P + I+F ++ N +
Sbjct: 297 MGRGGYVQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVS 356
Query: 169 KAP------------ICMKNVSLLVLAPSV---KWQCQFVSGFNGQVFPLPCPQLQNK 211
+ +CM NVS + L+P+ ++ C + G + V P PC L +K
Sbjct: 357 TSAKLEGMKSNPFTGVCMSNVS-ISLSPNASKQQFHCMDIVGESRSVKPQPCSLLPDK 413
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 43/206 (20%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP-------- 41
+ N NILI + F NSPF TI+P +C +PNTDGI+P
Sbjct: 188 QAYNCKNILI-EGVTFKNSPFWTINPEFCDNVRVTGISIFNPHSPNTDGINPSSCTNVHI 246
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC+I G+ + +KSG D DG + + N+ + + GV IG EMSG I +
Sbjct: 247 SDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSGGIKKI 305
Query: 101 TVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDE 144
T+ + + + +GRGG +E NI+++NIK E + + + +G+ P
Sbjct: 306 TISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTTVEP-- 363
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKA 170
+ P R I N+ + N KA
Sbjct: 364 --VTEKTPIFRNIHMSNITASNVNKA 387
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 57/215 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
L +S+L + F T+ P +C + PNTDG+DPD CYI +G+
Sbjct: 685 LYLSDLTLTDPAFWTVAPAFCKNVHIHDLRIITSGPNTDGVDPDSCQNVLVERCYISTGD 744
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVS------------GTTPTC-----------SG 86
+A+KSG +A+ P++N+ +R V G+ C G
Sbjct: 745 DCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHG 804
Query: 87 VGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ IG EMSG I++V D+L T GRGG++ N+ RN+ ++ V + I+
Sbjct: 805 ISIGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLIN 864
Query: 136 RGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
+ N G A+P I NV + N A
Sbjct: 865 QDYNSVTCVG---DALPNFSDILVQNVIANNVKMA 896
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID---------PDCYIESGN 49
+S + NSPF H VY + APN DGID DCY+ +G+
Sbjct: 172 VSGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGD 231
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LD 106
V +KSG D +G + RP+S I V + GV IG EMSG + +VTV + D
Sbjct: 232 DAVCIKSGKDEEGRRIGRPASGITVTNCT-VEAGHGGVVIGSEMSGDVRDVTVSNCTFTD 290
Query: 107 TD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP--DEGRDP----KAIP 152
TD +GRGG +E+ N+ M RV P I NG+ D DP ++ P
Sbjct: 291 TDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTI----NGYYFMDIDSDPIPVDESTP 346
Query: 153 KIRGISFVNVFSVNTTKA 170
+R I++ ++ + + A
Sbjct: 347 MVRNIAYSDIIARDVETA 364
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 43/206 (20%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP-------- 41
+ N NILI + F NSPF TI+P +C +PNTDGI+P
Sbjct: 188 QAYNCKNILI-EGVTFQNSPFWTINPEFCDNVTVTGISIFNPHSPNTDGINPSSCTNVHI 246
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+C+I G+ + +KSG D DG + + N+ + + GV IG EMSG I +
Sbjct: 247 SNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSGGIKKI 305
Query: 101 TVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDE 144
T+ + + + +GRGG +E NI+++NIK E + + + +G+ P
Sbjct: 306 TISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQVEP-- 363
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKA 170
+ P R I N+ + N KA
Sbjct: 364 --VTEKTPIFRNIHMSNITASNVNKA 387
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 33/165 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
+E +N NILI + ++ F IHP+ C S N+DG DP+
Sbjct: 205 IEPLNCRNILI-EGVRIIDATFWVIHPIGCNNVTVRNVSIDSFNANSDGFDPESTTNALV 263
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C+ +G+ +A+KSG D DG + +P+ NI VR S SGV IG E+SG + NV
Sbjct: 264 ENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRN-STFESLASGVCIGSEISGGVRNV 322
Query: 101 TVDHLDTDKG-----------RGGNIENIIIRNIKMERVKIPIKI 134
++++ K RGG +EN IRN+ M+ V I+
Sbjct: 323 FIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRF 367
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 36/174 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP----DCYI 45
++ +N NIL+ N+ NSPF +H + Y S+ N DGIDP D I
Sbjct: 200 IQFLNCKNILV-ENIRIENSPFWCLHLLKSESITIRGISYKSLNHNNDGIDPEYAKDVLI 258
Query: 46 ES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
E+ G+ VA+K+G DH+G A A PS NI +R + GV IG EMS + N
Sbjct: 259 ENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCN--FKGLHGVVIGSEMSAGVQN 316
Query: 100 VTVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
V V+ +L T+ RGG I+NI +RNI++++V+ + I+ +G
Sbjct: 317 VFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYITANYHGE 370
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 40/192 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPD---------CYI 45
++I + F +SP T+ PV+CS + NTDGIDPD C +
Sbjct: 185 VLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVV 244
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV----- 100
++G+ + +K+G D D PS NI +R G+ IG EMS + N+
Sbjct: 245 DTGDDAICIKAGRDEDAWEAGIPSENILIRHCE-IRSGHGGITIGSEMSAGVRNLHAHDC 303
Query: 101 TVDHLD------TDKGRGGNIENIIIRNIKMERVK---IPIKISRGSN-GHPDEGRDPKA 150
T D D T GRGG I++I+I NI R++ + + G P + ++ K
Sbjct: 304 TCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKH 363
Query: 151 IPKIRGISFVNV 162
+P + I NV
Sbjct: 364 VPAVENILIRNV 375
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 35/168 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
V+ N N+ + + NSPF T+HPVYC APNTDGID
Sbjct: 165 VQFYNCTNVRL-EQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNV 223
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC + G+ +A+KSG DGI + RP+ N+ VR + G+ IG E + I
Sbjct: 224 QIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCT-VRDAHGGMVIGSETAAGIR 282
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+V ++ + + +GRGG I ++ +RN+ ME PI I+
Sbjct: 283 HVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAIN 330
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY-----------CSIAPNTDGIDPD------- 42
VE N N+L+ ++ +SPF IHPV PN DG +P+
Sbjct: 221 VEFYNCENVLV-EDIHLKDSPFWNIHPVLSRNVIVRGVEVVGHGPNNDGCNPESVDHMLI 279
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
CY ++G+ +A+KSG + DG +A PS NI +R GV IG E+SG +FNV
Sbjct: 280 ENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQ-MKAGHGGVVIGSEISGDVFNV 338
Query: 101 TVD-------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ + + RGG +ENI +RNI++ +V + I + + +EG +
Sbjct: 339 YAEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMI---CDFNYEEGIN 395
Query: 148 PKAIPKIRGISFVNV 162
P +R +S ++
Sbjct: 396 GPFTPVLRNVSMQSI 410
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------CYIES 47
N ++I ++ NSPF IHP+ C PN DG DP+ C ++
Sbjct: 238 NTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYNRGPNGDGCDPESCKNVLIENCRFDT 297
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG RPS NI VR GV IG E+SG N+ V++
Sbjct: 298 GDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGH-GGVVIGSEISGGYRNLYVENCVM 356
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG +EN+ +RNIK+
Sbjct: 357 DSPQLDRVIRIKTNDCRGGIVENVFVRNIKV 387
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 50/201 (24%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 207 IEGVKIVNSPFWTVNPEFCENVKVKGVTIHNVPSPNTDGINPESCRNVHISDCHISVGDD 266
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
+ +KSG D G + P NI + +SG GV IG EMSG + VT+ +
Sbjct: 267 CITIKSGRDAQGRRLGVPCENITITNCIMLSGH----GGVVIGSEMSGGVRKVTISNCIF 322
Query: 105 --------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAI 151
L + +GRGG +E NI++RNIK E V + +K S G P E + +
Sbjct: 323 DGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYS----GMPAEPKSERT- 377
Query: 152 PKIRGISFVNVFSVNTTKAPI 172
P R I ++ +V K P+
Sbjct: 378 PLFRNIH-ISGMTVTDVKTPV 397
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
+++ ++ N+ +S + NSPF H VY + APN DGID
Sbjct: 163 LQIFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYV 221
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ + +KSG D +G + P+S I V + GV IG EMSG +
Sbjct: 222 RISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCT-VEAGHGGVVIGSEMSGDVR 280
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV + DTD +GRGG +E++ I M R+ P I+ D +
Sbjct: 281 DVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPE 340
Query: 148 P--KAIPKIRGISFVNVFSVNTTKA 170
P + P +R +SF N+ + N A
Sbjct: 341 PTGEGTPLVRNVSFSNITARNVETA 365
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
+++ ++ N+ +S + NSPF H VY + APN DGID
Sbjct: 185 LQVFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYV 243
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ + +KSG D +G + P+S I V + GV IG EMSG +
Sbjct: 244 RISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVR 302
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV + DTD +GRGG +E++ I M R+ P I+ D +
Sbjct: 303 DVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPE 362
Query: 148 P--KAIPKIRGISFVNVFSVNTTKA 170
P + P +R +SF N+ + N A
Sbjct: 363 PIDEGTPLVRNVSFSNITARNVETA 387
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RNI++
Sbjct: 342 DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RNI++
Sbjct: 342 DSPNLERIIRIKTNNCRGGVIENIYVRNIEV 372
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RNI++
Sbjct: 342 DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID-------- 40
++ S N+ + S + NSPF H VY + APN DGID
Sbjct: 189 QISESENVSV-SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVR 247
Query: 41 -PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
D YI +G+ + +KSG + +G + P+S I V + GV IG EMSG + +
Sbjct: 248 ISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVRD 306
Query: 100 VTVDH---LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHP----DE 144
VTV + DTD+G RGG +E++ NI M R+ P I NG+ D
Sbjct: 307 VTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTI----NGYYFMPLDS 362
Query: 145 GRDP--KAIPKIRGISFVNV 162
+P + P +R +SF N+
Sbjct: 363 DSEPVDEGTPMVRNVSFTNI 382
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID------- 40
+++ ++ N+ +S + NSPF H VY + APN DGID
Sbjct: 163 LQVFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYV 221
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ + +KSG D +G + P+S I V + GV IG EMSG +
Sbjct: 222 RISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVR 280
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+VTV + DTD +GRGG +E++ I M R+ P I+ D +
Sbjct: 281 DVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPE 340
Query: 148 P--KAIPKIRGISFVNVFSVNTTKA 170
P + P +R +SF N+ + N A
Sbjct: 341 PIDEGTPLVRNVSFSNITARNVETA 365
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 38/186 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I ++ N+PF +HP S+ PN+DG DP+ C+ +G+
Sbjct: 225 VLIEDITIINAPFWLLHPTLSQNVTVRGVHLESLGPNSDGCDPESCKNVVIENCFFNTGD 284
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG ++DG +A P+ N+ +R GV IG E+SG + NV ++
Sbjct: 285 DCIAIKSGRNNDGRRLATPTENVIIRNCK-MEAGHGGVVIGSEISGGVRNVFAENNVMSS 343
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D +KG RGG +ENI +RN + V+ I I N +EG K P +R
Sbjct: 344 PDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVI----NFQYEEGDAGKFDPTVRN 399
Query: 157 ISFVNV 162
+ N+
Sbjct: 400 VEIRNL 405
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID-------- 40
++ S N+ + S + NSPF H VY + APN DGID
Sbjct: 164 QIYGSENVSV-SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVR 222
Query: 41 -PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
D YI +G+ + +KSG + +G + P+S I V + GV IG EMSG + +
Sbjct: 223 ISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVRD 281
Query: 100 VTVDH---LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHP----DE 144
VTV + DTD+G RGG +E++ NI M R+ P I NG+ D
Sbjct: 282 VTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTI----NGYYFMPLDS 337
Query: 145 GRDP--KAIPKIRGISFVNV 162
+P + P +R +SF N+
Sbjct: 338 DSEPVDEGTPMVRNVSFTNI 357
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RN+++
Sbjct: 342 DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RN+++
Sbjct: 342 DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I N+ NSPF IHP++C S PN+DG DP+ C ++
Sbjct: 223 NTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENCIFDT 282
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG PS NI VR GV +G E+SG N+ V++
Sbjct: 283 GDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEISGGYKNLFVENCKM 341
Query: 105 ----------LDTDKGRGGNIENIIIRNIKM 125
+ T+ RGG IENI +RN+++
Sbjct: 342 DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 34/154 (22%)
Query: 5 NSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------CY 44
N+ + +++ L NSPF IHP+ + PN DG DP+ C
Sbjct: 218 NACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTNDGPNGDGCDPEACSNVLIQNCT 277
Query: 45 IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD- 103
++G+ +A+KSG ++DG RPS NI +R GV IG E+SG NV +
Sbjct: 278 FDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCK-MKDGHGGVVIGSEISGGCRNVFAED 336
Query: 104 ------HLD------TDKGRGGNIENIIIRNIKM 125
HLD T+ RGG IENI +RN+ +
Sbjct: 337 CHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTV 370
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 41/211 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP----DCYI 45
++ +N NIL+ N+ NSPF +H + Y S+ N DGIDP D I
Sbjct: 197 IQFLNCKNILV-ENVRIENSPFWCLHLLKSQNITVRGISYKSLNYNNDGIDPEYAKDVLI 255
Query: 46 ES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
E+ G+ VA+K+G DH+G A A PS NI +R + GV IG EMS + N
Sbjct: 256 ENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCN--FKGLHGVVIGSEMSAGVQN 313
Query: 100 VTVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V V+ +L T+ RGG I+N+ ++N++++ V+ + I+ +G EG
Sbjct: 314 VFVENCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHG---EGEG 370
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPICMKNVS 178
++ I I F N+ +++ I ++ S
Sbjct: 371 YQS--DISNIHFSNITCNRASESGIVIQGFS 399
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 46/201 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDPD---- 42
++ M N+ I + NSPF T++P +C S APNTDGI+P+
Sbjct: 201 IQTMYCKNVFI-EGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNN 259
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
C+I G+ + +KSG D G MA P+ N + + + GV IG EMSG +
Sbjct: 260 VHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGH-GGVVIGSEMSGDV 318
Query: 98 FNVTVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGH 141
+++ + + + +GRGG +E NII++NIK + + + ++ ++ +
Sbjct: 319 RKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLDLQYAK-TTLE 377
Query: 142 PDEGRDPKAIPKIRGISFVNV 162
P R P+ R I F N+
Sbjct: 378 PVSER----TPRFRNIHFSNI 394
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 34/160 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
++++N+ +L+ A NSPF H VY S+ N DG+D D
Sbjct: 214 IQILNAERVLLQDYTA-LNSPFWVNHLVYTDHAQVRGVKVDSMFANNDGLDIDSGRWILV 272
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ +G+ +A+KSG D DG + RPS NI VR + GVG+G EMSG I NV
Sbjct: 273 ENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLGSEMSGGIKNV 330
Query: 101 TVDHLDTDKG-----------RGGNIENIIIRNIKMERVK 129
D KG RGG++E++ IRN+K+ K
Sbjct: 331 YFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAK 370
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 43/211 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
V+++NSNN+ + L NSPF T+HP+Y + APNTDGID D
Sbjct: 165 VQILNSNNVKL-EGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFV 223
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C ++ G+ +A+KSG DG+A +P+++I + + G IG E + I
Sbjct: 224 TIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECT-VKSAHGGAVIGSETAAGIR 282
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD 143
+V V + T +GRGG I N+ +++M+ P+ ++ GS D
Sbjct: 283 DVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQD 342
Query: 144 EGRDPKAI----PKIRGISFVNVFSVNTTKA 170
+ +I P I G++ + +S + T +
Sbjct: 343 FSLEKLSITDTTPSIEGVTIEDCYSEDFTSS 373
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 51/240 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP----DCYI 45
++ NIL+ N+ NSPF +H + Y S+ N DGIDP D I
Sbjct: 200 IQFFKCKNILV-ENIRIENSPFWCLHLLKSESITVRGISYKSLNYNNDGIDPEYAKDVLI 258
Query: 46 ES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
E+ G+ +A+K+G DH+G A A PS NI +R + GV IG EMS + N
Sbjct: 259 ENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCN--FKGLHGVVIGSEMSAGVQN 316
Query: 100 VTVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V V+ +L T+ RGG I+N+ +RNI+++ V+ + I+ +G EG+
Sbjct: 317 VYVENCKTVGYLKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANYHG---EGKG 373
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPIC--------MKNVSLLVLAPSVKWQCQFVSGFNGQ 199
++ +I +SF ++ + I +KN+SL + +KW +S N +
Sbjct: 374 FQS--EISNVSFSDISCNKASATGIVIQGFPDKKIKNISLNNI--EIKWAKNAISSTNAE 429
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 44/167 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NNI +I N+ NSPF TI+P +C PNTDGI+P
Sbjct: 194 IQFFECNNI-VIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSC 252
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG +P N+ + +SG GV IG E
Sbjct: 253 SNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGH----GGVVIGSE 308
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
MSG + V + + L +GRGG +E+I + NI M+ +
Sbjct: 309 MSGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNI 355
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 44/199 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP------- 41
++ M N+LI + NSPF T++P + +PNTDGI+P
Sbjct: 191 IQTMFCKNVLI-DGITIRNSPFWTVNPEFSENVKIHAVTINNPHSPNTDGINPESCKNVH 249
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
DC+I G+ + +KSG D G MA P+ N + + GV IG EMSG +
Sbjct: 250 ISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCT-MLSGHGGVVIGSEMSGDVRK 308
Query: 100 VTVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPD 143
+T+ + + T +GRGG +E NII+++IK + + + ++ ++ +N P
Sbjct: 309 ITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAK-TNVQPV 367
Query: 144 EGRDPKAIPKIRGISFVNV 162
R PK R I F N+
Sbjct: 368 SDR----TPKFRNIHFSNI 382
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 38/190 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + N+PF ++PV C S PN+DG DP+ C ++G+
Sbjct: 267 VLIEGVTITNAPFWLLNPVLCENVTVDGVNCISHGPNSDGCDPESCKNVVIKNCLFDTGD 326
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + P+ NI + GV IG E+SG + NV V+H
Sbjct: 327 DCIAIKSGRNADGRRLNTPTENIVISHCK-MREGHGGVVIGSEISGGVRNVFVEHCEMSS 385
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IEN IR+I + V I I + +EG K P +R
Sbjct: 386 PNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVI----DFDYEEGDAGKFTPTVRN 441
Query: 157 ISFVNVFSVN 166
I N+ N
Sbjct: 442 IDIRNLHCEN 451
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 6 SNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------CYI 45
S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 221 SCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFNRGPNGDGCDPESCKNVLIENCRF 280
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-- 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 DTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGH-GGVVIGSEISGGYRNLYVEDC 339
Query: 104 -----------HLDTDKGRGGNIENIIIRNIKM 125
+ T RGG IEN+ +RNIK+
Sbjct: 340 VMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKV 372
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NN+LI N+ NSPF TI+P +C PNTDGI+P
Sbjct: 191 IQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + VT+ + L + +GRGG +E + + NI M+ ++
Sbjct: 306 MSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NN+LI N+ NSPF TI+P +C PNTDGI+P
Sbjct: 191 IQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + VT+ + L + +GRGG +E + + NI M+ ++
Sbjct: 306 MSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NN+LI N+ NSPF TI+P +C PNTDGI+P
Sbjct: 191 IQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + VT+ + L + +GRGG +E + + NI M+ ++
Sbjct: 306 MSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 238 VLIEGVTIKNSPFWLVNPVLCENVTVQGIHCESYGPNSDGCDPEACKDVLIQNCIFDTGD 297
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---- 105
+A+KSG + DG + S NI + GV IG E+SG + N+ VD+
Sbjct: 298 DCIAIKSGRNADGRRVGVASENILIENCQ-MKAGHGGVVIGSEISGGVRNLYVDNCEMSS 356
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D+G RGG+++N+ RNI + +VK I I N + +EG K P +
Sbjct: 357 PDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVI----NFYYEEGDVGKFTPVLED 412
Query: 157 ISFVNVFSVNTTKA 170
I N++ + T+A
Sbjct: 413 IRIENLWVEHATRA 426
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP-------- 41
+ N NILI + F NSPF TI+P +C +PNTDGI+P
Sbjct: 190 QAYNCKNILI-EGVTFKNSPFWTINPEFCDNVTVTGITINNPHSPNTDGINPSSCTNVHI 248
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+C+I G+ + +KSG D DG + + N+ + + GV IG EMSG I +
Sbjct: 249 SNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSGGIKKI 307
Query: 101 TVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDE 144
T+ + + +GRGG +E NI+++NIK E + + + + + P
Sbjct: 308 TISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKNIKEEAIILDLFYDKDNPVEPVT 367
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKA 170
R P R I NV N KA
Sbjct: 368 ER----TPIFRNIHISNVTGGNVNKA 389
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NN+LI N+ NSPF TI+P +C PNTDGI+P
Sbjct: 191 IQFYECNNVLI-ENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + VT+ + L + +GRGG +E + + NI M+ ++
Sbjct: 306 MSGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPD---------CYI 45
++I + F +SP T+ PV+C+ + NTDGIDPD C +
Sbjct: 185 VLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVV 244
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV----- 100
++G+ + +K+G D D P NI +R G+ IG EMS + N+
Sbjct: 245 DTGDDAICIKAGRDEDAWEAGIPCENILIRHCE-IRSGHGGITIGSEMSAGVRNLHAHDC 303
Query: 101 TVDHLD------TDKGRGGNIENIIIRNIKMERVK---IPIKISRGSN-GHPDEGRDPKA 150
T D D T GRGG I++I+I NI R++ + + G P + ++ K
Sbjct: 304 TCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKH 363
Query: 151 IPKIRGISFVNV 162
+P + I NV
Sbjct: 364 VPAVENILIRNV 375
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 33/165 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY-----------CSIAPNTDGIDPD------- 42
V N N+L+ P TIHPVY + PN DGIDPD
Sbjct: 206 VVFFNCRNVLM-EGFTIGGGPNWTIHPVYSENIIIRRVHVLTEGPNNDGIDPDSCRNVLI 264
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ V +KSG++ DG +ARP+ N+ +R S G+ +G EMSG + NV
Sbjct: 265 EHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSAR-GHGGLVVGSEMSGDVRNV 323
Query: 101 TV---DHLDTD--------KGRGGNIENIIIRNIKMERVKIPIKI 134
+ D TD +GRGG +ENI N+++ ++ + I
Sbjct: 324 YMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVI 368
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 42/187 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------------SIAPNTDGIDP----- 41
++ ++S NILI + NSPF TI+P +C S APNTDGI+P
Sbjct: 183 IQFLHSKNILI-EGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSN 241
Query: 42 ----DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
DC+I G+ + +KSG D G + RP+ N + + GV IG EMSG +
Sbjct: 242 VHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCT-MLRGHGGVVIGSEMSGGV 300
Query: 98 FNVTVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGH 141
+ + + + T +GRGG +E NI+++NI + + + ++ ++G+
Sbjct: 301 KKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGAE-E 359
Query: 142 PDEGRDP 148
P R P
Sbjct: 360 PVSERTP 366
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVY--------------CSIAPNTDGID------- 40
++ S N+ +S + NSPF H VY APN DGID
Sbjct: 164 QISESENV-TVSGVTLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYV 222
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D YI +G+ + +KSG + +G + P+S I V + GV IG EMSG +
Sbjct: 223 RISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEMSGDVR 281
Query: 99 NVTVDH---LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+V V + DTD+G RGG +E++ NI M R+ P I+ D +
Sbjct: 282 DVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPE 341
Query: 148 P--KAIPKIRGISFVNVFSVNTTKA 170
P + P +R ++F N+ + N A
Sbjct: 342 PVDEGTPMVRNVTFSNITARNVETA 366
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 36/172 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------SI---APNTDGIDP-------- 41
+E +N ++LI N+ +SP +HPV C SI PN DGIDP
Sbjct: 173 LEFINCRDVLI-ENVTLRDSPAYLVHPVGCENVTLRGLSILGNGPNNDGIDPEYCRNVLI 231
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC +++G+ + +KSG D DG A RP+ N+ VRR+ G+ +G E+S I NV
Sbjct: 232 EDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGH-GGIVLGSELSSGIRNV 290
Query: 101 TVDHLD-----------TDKGRGGNIENIIIRNIKMERV---KIPIKISRGS 138
V+ D + GRGG +ENI +RNI+M + I I + GS
Sbjct: 291 LVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGS 342
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP------- 41
++L+ N+ I + NSPF T++P +C +PNTDGI+P
Sbjct: 194 IQLLRCRNVRI-EGITIVNSPFWTVNPNFCDNVTVKGVTINNVPSPNTDGINPESCSNVH 252
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
DC+I G+ + +KSG D + RP NI + + + GV IG EMSG +
Sbjct: 253 ISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGH-GGVVIGSEMSGGVKK 311
Query: 100 VTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
VT+ + + + +GRGG +E+I + N+ M +K + +
Sbjct: 312 VTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKMEKKS 371
Query: 149 KAIPKIRGISFVNVFSVNTTKAPI 172
+ P R I FV +V T+ P+
Sbjct: 372 ERTPVFRNI-FVTGLTVRGTQTPL 394
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 51/247 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC-----Y 44
+NS ++I + NSP TIHP + +PNTDGIDP+ Y
Sbjct: 224 FLNSCENVVIEGIKIMNSPSWTIHPFLTNNLRFINLKIENPADSPNTDGIDPESCENVEY 283
Query: 45 I----ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
I G+ +A+KSG + G + +PS N ++ S GV IG EMSG + N+
Sbjct: 284 IGIDFSVGDDCIAIKSGKLYLGKVLNKPSKNFIIKNCS-MKYGHGGVVIGSEMSGGVENI 342
Query: 101 TVDHLD-----------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
++ D T +GRG N I+ I ++NI M+ VK+P + PD +
Sbjct: 343 NIEKCDFYKTDKGIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTE 402
Query: 148 ----------PKAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAP--SVKWQCQFVSG 195
+ P I+ ISF N+ + +T +C + L P +VK++ V
Sbjct: 403 YVYTKEKLPVDERTPSIKNISFENIKAEDTL---VCAGFLYGLPEKPIENVKFKNVEVDF 459
Query: 196 FNGQVFP 202
+G+V P
Sbjct: 460 KDGEVTP 466
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 36/196 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 166 VTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDA 225
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 226 GDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 284
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP--KAIPKI 154
DTD +GRGG +E++ I M RV P I+ D +P +A P +
Sbjct: 285 TDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNV 344
Query: 155 RGISFVNVFSVNTTKA 170
R + F ++ + A
Sbjct: 345 RNVDFHHITAEEVESA 360
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
+ + S NILI ++ SPF IHP+ C + PN DG DP+
Sbjct: 215 INFVRSENILI-KDVTLLRSPFWVIHPLLCKNITVDGVQIWNEGPNGDGCDPEACENVII 273
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG ++DG +PS NI +R GV IG E+SG NV
Sbjct: 274 QNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGGCENV 332
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPI-KISRGSNGHPDEGR 146
++ + T+ RGG I+NI +RN+K+ + K + KI+ + D R
Sbjct: 333 YAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNEDCYR 392
Query: 147 DPKAIPKIRGISFVNV 162
+ P +R ++ NV
Sbjct: 393 GFE--PTVRNVNMENV 406
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 166 VTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDA 225
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D +G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 226 GDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 284
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP--KAIPKI 154
DTD +GRGG +E++ I M RV P I+ D +P +A P +
Sbjct: 285 TDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNV 344
Query: 155 RGISFVNVFSVNTTKA 170
R + F ++ + A
Sbjct: 345 RNVDFHHITAEEVESA 360
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 32/152 (21%)
Query: 12 ISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGNGL 51
I + +SPF IHP++C S N DG DP+ C +G+
Sbjct: 223 IEGITIKDSPFWVIHPIFCNNVIVRDVTVDSHNRNNDGCDPESCSNVLIEGCTFSTGDDA 282
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-------- 103
+A+KSG D+D + +P+ N+ +R + + +GV IG E+SG + NV ++
Sbjct: 283 IAIKSGRDNDAWRIGQPTENVVIRNCTFWS-KINGVCIGSEISGGVRNVFIENISILKSS 341
Query: 104 ---HLDTDKGRGGNIENIIIRNIKMERVKIPI 132
+ ++ RGG IENI +RNI+ + V+ +
Sbjct: 342 NAIYFKSNLDRGGYIENIYVRNIQADSVRTAL 373
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 38/190 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 229 ILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSSHGPNSDGCDPESCDHVHIKNCVFDTGD 288
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG + DG + PS NI + GV IG E+SG + NV V
Sbjct: 289 DCIAIKSGRNADGRRVGVPSQNIVIENCH-MKEGHGGVVIGSEISGGVNNVFVQNCTMDS 347
Query: 104 -HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
HL+ T+ RGG IE+I IRN+ + VK + I N + +EG + P +R
Sbjct: 348 PHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVI----NFYYEEGDAGQFDPTVRD 403
Query: 157 ISFVNVFSVN 166
I N+ N
Sbjct: 404 IQIENLHCKN 413
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 159 VTVSGVTLRNSPFWNTHVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDA 218
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D +G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 219 GDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 277
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP--KAIPKI 154
DTD +GRGG +E++ I M RV P I+ D +P +A P +
Sbjct: 278 TDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNV 337
Query: 155 RGISFVNVFSVNTTKA 170
R + F ++ + A
Sbjct: 338 RNVDFHHITAEEVESA 353
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 203 VTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDA 262
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 263 GDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 321
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGH--PDEGRDPK----A 150
DTD +GRGG +E++ I M RV P I NG+ D DPK A
Sbjct: 322 TDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVI----NGYYQTDIDSDPKPVTEA 377
Query: 151 IPKIRGISFVNVFSVNTTKA 170
P +R + F ++ + A
Sbjct: 378 TPNVRNVDFHHITAEEVESA 397
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCIFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++RNIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 203 VTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDA 262
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 263 GDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 321
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGH--PDEGRDPK----A 150
DTD +GRGG +E++ I M RV P I NG+ D DPK A
Sbjct: 322 TDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVI----NGYYQTDIDSDPKPVTEA 377
Query: 151 IPKIRGISFVNVFSVNTTKA 170
P +R + F ++ + A
Sbjct: 378 TPNVRNVDFHHITAEEVESA 397
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 23/97 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S+NI I SNL NSP +HPVY S +PNTDGI+PD
Sbjct: 104 IELMFSDNIQI-SNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDSCTNV 162
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR 75
CYI SG+ VAVKSGWD GI P+ + +
Sbjct: 163 RIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 34/159 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKMERVK 129
+ + T RGG IEN+ +RN+ + + +
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 34/193 (17%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 204 IEGITIVNSPFWTVNPNFCDNVTVKGVTINNVPSPNTDGINPESCSNVHISDCHISVGDD 263
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + RP NI + + + GV IG EMSG + VT+ +
Sbjct: 264 CITIKSGRDLQARKIGRPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 322
Query: 105 -----LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISF 159
+ + +GRGG +E+I + N+ M +K + + + P R I F
Sbjct: 323 DRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKMEKKSERTPVFRNI-F 381
Query: 160 VNVFSVNTTKAPI 172
V +V T+ P+
Sbjct: 382 VTGLTVRGTQTPL 394
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 39/199 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
+++ + NSP ++PV C S PN+DG DP DCY +G+
Sbjct: 235 VLVEGVKIVNSPMWILNPVLCENVTIEGVTVESHGPNSDGCDPESSKNVLIKDCYFNTGD 294
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG + DG + PS NI ++ GV IG E+SG + NV +
Sbjct: 295 DCIAIKSGRNADGRRINVPSENIIIQNCK-MADGHGGVVIGSEISGGVRNVFAENCEMNS 353
Query: 104 -HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
HLD T RGG IE+I +RNI + +I ++ R + + D G +P +R
Sbjct: 354 PHLDRALRIKTSSMRGGIIEDIYLRNIDVG--QIAQQVVRVNMFYEDSG---AYVPTVRN 408
Query: 157 ISFVNVFSVNTTKAPICMK 175
I N+ N K + ++
Sbjct: 409 IHVENMTVENGGKVGVLLE 427
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 34/155 (21%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC---------YIES 47
N + +S + NSPF IHP+ C + PN DG DP+ + +
Sbjct: 220 NRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWNEGPNGDGCDPEACENVLIQNTHFHT 279
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV-----TV 102
G+ +A+KSG ++DG +PS NI +RR G+ IG E+SG NV T+
Sbjct: 280 GDDCIAIKSGRNNDGRLWNQPSKNIIIRRCV-MEDGHGGIVIGSEISGGCMNVFAEDCTM 338
Query: 103 D--HLD------TDKGRGGNIENIIIRNIKMERVK 129
D HLD T+ RGG IENI +R +K+ + K
Sbjct: 339 DSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCK 373
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 34/159 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKMERVK 129
+ + T RGG IEN+ +RN+ + + +
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 34/159 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKMERVK 129
+ + T RGG IEN+ +RN+ + + +
Sbjct: 338 NCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 40/185 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPD------ 42
++ MN N+ I ++ NSPF TI+P YC +PNTDGI+P+
Sbjct: 188 IQFMNCKNVQI-KDIKIQNSPFWTINPQYCDNVTVDGITIDNPPSPNTDGINPESCRNVR 246
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C+I G+ + +KSG D G + P+ N + + GV IG EMSG + N
Sbjct: 247 IANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCT-MLRGHGGVVIGSEMSGGVKN 305
Query: 100 VTVDH-----------LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPD 143
+ + + + + +GRGG +E NII+RNI+ + + + ++ ++ +N P
Sbjct: 306 IAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQAIVLDLQYAK-TNPEPI 364
Query: 144 EGRDP 148
R P
Sbjct: 365 SERTP 369
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 189 VTVSGVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDA 248
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D +G + RP+ N+ V + GV +G E +G + +VTV +
Sbjct: 249 GDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVVGSETAGDVRHVTVTNCTF 307
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGH--PDEGRDPK----A 150
DTD +GRGG +E++ I M RV P + NG+ D DPK A
Sbjct: 308 TDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVL----NGYYQTDIDSDPKPVDEA 363
Query: 151 IPKIRGISFVNVFSVNTTKA 170
P +R ++F ++ + A
Sbjct: 364 TPNVRNVNFHHITAEEVESA 383
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 36/196 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+ +S + NSPF H VY APN DGID D +I++
Sbjct: 166 VTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDA 225
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G + RP+ N+ V + GV IG E +G + +VTV +
Sbjct: 226 GDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTF 284
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP--KAIPKI 154
DTD +GRGG +E++ I M RV P I+ D +P +A P +
Sbjct: 285 TDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNV 344
Query: 155 RGISFVNVFSVNTTKA 170
R + F ++ + A
Sbjct: 345 RNVDFHHITAEEVESA 360
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NILI N+ NSPF TI+P +C PNTDGI+P
Sbjct: 191 IQFYECTNILI-ENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + V + + L +GRGG +E+I + NI M+ ++
Sbjct: 306 MSGGVKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 236 VLIEGVTIKNSPFWLVNPVLCKNVTVRNIHCDSHGPNSDGCDPEACTDVLIENCIFDTGD 295
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---- 105
+A+KSG + DG + +P NI + + GV IG E+SG + N+ +
Sbjct: 296 DCIAIKSGRNADGRRVGQPCENILINNCQMRSGH-GGVVIGSEISGGVRNLYAQNCEMSS 354
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D+G RGG+++N+ R+I++ +VK + I N + +EG K P +
Sbjct: 355 PDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVI----NFYYEEGDVGKFTPVLED 410
Query: 157 ISFVNVFSVNTTKA 170
I+ N++ + T+A
Sbjct: 411 INIENLYVEHATRA 424
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 39/175 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPD---------CYIESGNG 50
I + NSPF T++P +C +PNTDGI+P+ C+I G+
Sbjct: 193 IDGITIKNSPFWTVNPEFCDNVTIDGVTINNPPSPNTDGINPESCSNVHISNCHISVGDD 252
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D G ARP+ N + + + GV IG EMSG + + + +
Sbjct: 253 CITIKSGKDRSGRKEARPAENYTITNCTMLS-GHGGVVIGSEMSGDVKKIVISNCIFDGT 311
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPK 149
+ T +GRGG +E NI+++NIK + + + ++ ++ ++ P R P+
Sbjct: 312 DRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAK-TDREPVSERTPR 365
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E NI++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQ----MPAEAKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTDVKTPI 395
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E NI++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQ----MPAEAKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTDVKTPI 395
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 55/255 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDP-------- 41
++++ N+L+ + SP ++PV C+ A N DGIDP
Sbjct: 183 IQVIGCENVLV-EGVTLLRSPMWEVNPVLCTNVTVRGIHISTKAANNDGIDPESSNYVLI 241
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D Y ++G+ +A+KSG + DG A PS NI +R + G+ IG E+SG + NV
Sbjct: 242 EDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVSGGVNNV 300
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
D+ T+ RGG IENI +RN ++ V + + +EGR
Sbjct: 301 FADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVV---HATMLYEEGRH 357
Query: 148 PKAIPKIRGISFVN---------VFSVNTTKAPIC---MKNVSL-LVLAP--SVKWQCQF 192
+P+ R I+ N +F P+ M+NV L V P +V W+
Sbjct: 358 GDYMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENPLRAVNWENPV 417
Query: 193 VSG--FNGQVFPLPC 205
+ NG +P P
Sbjct: 418 LENVVINGMKYPAPS 432
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 37/199 (18%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++ ++ NSPF +HP+ S PN DG DP+ C +
Sbjct: 245 NTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNSHGPNNDGCDPEYSQNILIRNCTFNT 304
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G D DG +A PS NI V+ GV IG E+S + NV V++
Sbjct: 305 GDDCIAIKAGRDGDGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSEISAGVNNVFVENCVM 363
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVK-IPIKISRGSNGHPDEGRDPKAIPK 153
+ T+ RGG IENI +RN+++ VK +K++ N + + + IP
Sbjct: 364 DSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYNVYGSQTGN--FIPT 421
Query: 154 IRGISFVNVFSVNTTKAPI 172
IR +S NV N K +
Sbjct: 422 IRNVSLENVTVKNGGKYSV 440
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCT-MLAGHGGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E NI++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQ----MPAEAKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTDAKTPI 395
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 53/273 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC----------SIAP--NTDGIDPD------ 42
V M S N+LI L F SP TIH +Y P +TDGI D
Sbjct: 191 VRTMESRNVLI-EGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGIAVDSSRNVR 249
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
CYI++G+ + +K+G D DG+ + RP+ N+++ S V IG E SG + N
Sbjct: 250 ISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCS-VHHAHGAVTIGSETSGWVRN 308
Query: 100 VTVDHLDTD-----------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR-- 146
+ ++ D +GRGG +E++ N ME V + I +N + EG
Sbjct: 309 LVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNI---TNYYLMEGEKP 365
Query: 147 --DPKAI----PKIRGISFVNVFSVNTTKAPICMK-----NVSLLVLAPSVKWQCQFVSG 195
DP+ + P R I+ N +VN + I ++ NVS L ++ + V
Sbjct: 366 ANDPEPVSNRTPVFRNIAISN-MTVNHARVAIDIEGLPEMNVSNLRISDFIGSAKTGVKA 424
Query: 196 FNGQVFPLPCPQLQNKSSSWCSFLEFSGEDLNF 228
++ L Q+ +S +FL +DL
Sbjct: 425 YHTDGLELHHVQINAESGP--AFLIRDSKDLEL 455
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDP---------DCYIESGN 49
+++ ++ SPF IHP++ + PN DG DP DC+ +G+
Sbjct: 231 ILLEDVTLLRSPFWVIHPLHSTDITVRRVKMINDGPNGDGCDPECCDRVLIEDCFFNTGD 290
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV--------- 100
+A+KSG + DG PS NI +R GV +G E+SG NV
Sbjct: 291 DCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGH-GGVVVGSEISGGCQNVYAHDCVMDS 349
Query: 101 ----TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
V + T+ RGG IENI +RNI + + K
Sbjct: 350 PELERVLRIKTNSCRGGIIENINMRNITVGKCK 382
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 7 NNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIE 46
NN+LI + NSPF ++PV C S PN+DG DP+ C +
Sbjct: 243 NNVLI-EGITIKNSPFWLVNPVLCNSVTVCDVTFSSHGPNSDGCDPESCNHVHIKNCVFD 301
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
+G+ +A+KSG + DG + S NI + GV IG E+SG + NV V
Sbjct: 302 TGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGGVNNVFVQNCT 360
Query: 104 ----HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPK 153
HL+ T+ RGG IE+I IRNI++ VK I I N + +EG + P
Sbjct: 361 MDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI----NFYYEEGDAGQFDPI 416
Query: 154 IRGISFVNVFSVNTTKAPICM 174
+R I N+ N + +
Sbjct: 417 VRDIKIDNLHCKNVLSKALYL 437
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 7 NNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIE 46
NN+LI + NSPF ++PV C S PN+DG DP+ C +
Sbjct: 243 NNVLI-EGITIKNSPFWLVNPVLCNSVTVCDVTFSSHGPNSDGCDPESCNHVHIKNCVFD 301
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
+G+ +A+KSG + DG + S NI + GV IG E+SG + NV V
Sbjct: 302 TGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGGVNNVFVQNCT 360
Query: 104 ----HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPK 153
HL+ T+ RGG IE+I IRNI++ VK I I N + +EG + P
Sbjct: 361 MDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI----NFYYEEGDAGQFDPI 416
Query: 154 IRGISFVNVFSVNTTKAPICM 174
+R I N+ N + +
Sbjct: 417 VRDIKIDNLHCKNVLSKALYL 437
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NILI N+ NSPF T++P +C PNTDGI+P
Sbjct: 191 IQFYECTNILI-ENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + + + + L +GRGG +E+I + NI M+ ++
Sbjct: 306 MSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDP---------DCYIESGN 49
++I + +SP IHPV C PNTDG++P DCY ++G+
Sbjct: 224 ILIEGVTVKDSPMWQIHPVLCENVIVRGVNIIGHGPNTDGVNPESCRNVLIEDCYFDNGD 283
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG + DG + PS NI +RR + GV IG E+SG + V +
Sbjct: 284 DCIAIKSGRNEDGRRIGVPSENIVIRR-NEMRDGHGGVTIGSEISGGVRYVYAEDNIMDS 342
Query: 104 -------HLDTDKGRGGNIENIIIRN-----IKMERVKIPIKISRGSNG 140
+ T+ RGG IE+I +N +K E V I + G G
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAG 391
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 44/168 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS----------------IAPNTDGIDP--- 41
++ NILI N+ NSPF T++P +C PNTDGI+P
Sbjct: 191 IQFYECTNILI-ENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSC 249
Query: 42 ------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGRE 92
DC+I G+ + +KSG D DG + NI + +SG GV IG E
Sbjct: 250 RNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----GGVVIGSE 305
Query: 93 MSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
MSG + + + + L +GRGG +E+I + NI M+ ++
Sbjct: 306 MSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 34/184 (18%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P D +I G+
Sbjct: 202 IEGVTIVNSPFWTVNPAFCDNVTITGVTIENPPSPNTDGINPTSCRNVHISDSHISVGDD 261
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D DG P+ N+ + + + GV IG E+SG I VT+ +
Sbjct: 262 CITIKSGRDMDGRKWDTPTENVTITNCTMLS-GHGGVVIGSEVSGSIRKVTISNCVFDGT 320
Query: 105 -----LDTDKGRGGNIENIIIRNIKMERVKI-PIKISRGSNGHPDEGRDPKAIPKIRGIS 158
L +GRGG +E I + N+ M+ +++ I ++ + + EG + P R I
Sbjct: 321 DRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKNTKEGPVTEETPAFRNIH 380
Query: 159 FVNV 162
NV
Sbjct: 381 ISNV 384
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N +++ ++ NSPF +HP+ S PN DG DP+ C +
Sbjct: 232 NTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNSHGPNNDGCDPEYSQNIVIKNCTFNT 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G D DG +A PS NI V+ GV IG E+S + NV V++
Sbjct: 292 GDDCIAIKAGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSEISAGVNNVFVENCVM 350
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVK-IPIKISRGSNGHPDEGRDPKAIPK 153
+ T+ RGG IEN+ +RN+++ VK +K++ N + + + IP
Sbjct: 351 DSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFYNVYGSQTGN--FIPV 408
Query: 154 IRGISFVNVFSVNTTKAPI 172
IR I+ NV N K I
Sbjct: 409 IRNINLENVNVKNGGKYSI 427
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
++ S NILI ++ NSPF ++PV C S N DG+DP
Sbjct: 242 IQPYKSKNILI-KDITILNSPFWEVNPVLCENIKIDSITVDSHLYNNDGVDPESCKDMII 300
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC+ +G+ +A+KSG +++G + PS NI +R + G+ IG E+SG + ++
Sbjct: 301 EDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRN-NKFEDGHGGITIGSEISGGVNDI 359
Query: 101 ----------TVDH---LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+D+ T+ RGG +ENI ++N + + KI + ++ +EG +
Sbjct: 360 FAHDNYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAV---IHADFFYEEGTN 416
Query: 148 PKAIPKIRGISFVNVFSV 165
+P +R I+ N+ +V
Sbjct: 417 GNYMPILRNITLSNIKTV 434
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 240 LYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFNRGPNGDGCDPESCKNVLIENC 299
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 300 TFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGH-GGVVIGSEISGGYRNLYVE 358
Query: 104 H-------------LDTDKGRGGNIENIIIRNI 123
+ + T RGG IEN+ +RN+
Sbjct: 359 NCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNV 391
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVCKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 34/155 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGH-GGVVIGSEISGGYRNLFVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKM 125
+ + T RGG IEN+ +RN+ +
Sbjct: 338 NCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTV 372
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 36/156 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
++I + NSP TI+PV C + +PNTDGI+PD CYI
Sbjct: 145 VLIQGIKIINSPAWTINPVRCNNVVIDGITIKNPADSPNTDGINPDSCRNVRITNCYISV 204
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ VA+KSG ++ + P NI + + GV IG EMSG + N+T+ +
Sbjct: 205 GDDCVAIKSGVEYSKYRI--PCENITITNCT-MLDGHGGVVIGSEMSGCVRNITISNCVF 261
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
+ T +GRGG +E+I + NI M++V P+
Sbjct: 262 EGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCPL 297
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 214 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 273
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 274 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 332
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 333 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 387
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 388 RNVH-ISGMTVTNVKTPI 404
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 38/194 (19%)
Query: 6 SNNILIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGIDPD---------CYI 45
+NNILI ++ NSPF ++PV C N DG+DP+ CY
Sbjct: 247 TNNILI-RDITILNSPFWEVNPVLCENIKVSGIRIDTNLYNNDGVDPESCKDMIIENCYF 305
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV----- 100
+G+ +A+KSG +++G + P+SNI +R + G+ IG E+SG + N+
Sbjct: 306 LTGDDCIAIKSGRNNEGRNIGIPTSNIIIRN-NEFKDGHGGITIGSEISGGVNNIFGHDN 364
Query: 101 --TVDHLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIP 152
+ LD T+ RGG +ENI I+N + + K+ + ++ +EG + P
Sbjct: 365 YFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV---IHADFFYEEGTNGNHKP 421
Query: 153 KIRGISFVNVFSVN 166
+R I+ N+ +V+
Sbjct: 422 ILRNIALSNIKTVD 435
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 38/197 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD------- 42
++ NS NILI + +SP I PV C PNTDG +PD
Sbjct: 205 IQFYNSKNILI-EGITVKDSPMWQISPVLCENITIDKVKIVGHGPNTDGFNPDSCKNILI 263
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
CY +G+ +A+KSG + DG + P NI ++ + G+ IG E+SG + NV
Sbjct: 264 KNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSEISGSVRNV 322
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
DH T+ RGG IENI +N ++ + I I + +EG
Sbjct: 323 FADHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFI---VDMDYEEGDA 379
Query: 148 PKAIPKIRGISFVNVFS 164
+ P +R I N+ S
Sbjct: 380 GEYTPIVRNIFVENLES 396
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVTIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++ NIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 37/189 (19%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N ++I ++ N+PF +HP+ S PN DG DP+ C +
Sbjct: 232 NTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNSHGPNNDGCDPEYSQNIIIKNCVFNT 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG D DG +A PS NI V+ GV IG E+S + NV V++
Sbjct: 292 GDDCIAIKSGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSEISAGVNNVFVENCIM 350
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVK-IPIKISRGSNGHPDEGRDPKAIPK 153
+ T+ RGG IE++ +RN+++ VK +K++ N + + IP
Sbjct: 351 DSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNVYGSQ--TGSFIPV 408
Query: 154 IRGISFVNV 162
IR IS NV
Sbjct: 409 IRNISLENV 417
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V + S ILI ++ NSPF +HP+ C + PN DG DP+
Sbjct: 218 VNFVRSERILI-KDVKMINSPFWVMHPLLCKDITVDGVTVWNEGPNGDGCDPEACENVLI 276
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG ++DG +PS NI +R GV IG E+SG NV
Sbjct: 277 QNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCR-MEDGHGGVVIGSEISGGCENV 335
Query: 101 TVD-------HLD------TDKGRGGNIENIIIRNIKMERVK 129
+ HL+ T+ RGG I+NI +R + + + K
Sbjct: 336 YAENCEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCK 377
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCNNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 215 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 274
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 275 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 333
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 334 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 388
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 389 RNVH-ISGMTVTNVKTPI 405
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 79/197 (40%), Gaps = 38/197 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+ L NIL+ SPF IHP+ S PN DG DP
Sbjct: 180 INLYKCKNILL-EGFTINRSPFWLIHPLLSENVTIKGVKMQSHGPNNDGCDPESCENVLI 238
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG D DG P NI VR +GV IG E++G NV
Sbjct: 239 EDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECR-MKDGHAGVAIGSEITGGCHNV 297
Query: 101 TVDHLDTDK-------------GRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V++ D RGGN+ N+ +RNI + K I H DEG
Sbjct: 298 WVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVDEG-- 355
Query: 148 PKAIPKIRGISFVNVFS 164
+P I N+ S
Sbjct: 356 -PYLPLFENIHLENITS 371
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 34/155 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S N ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGH-GGVVIGSEISGGYRNLFVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKM 125
+ + T RGG IEN+ +RN+ +
Sbjct: 338 NCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTV 372
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVIIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTDVKTPI 395
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++ NIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITIDNVPSPNTDGINPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCIFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E NI++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSK----MPAEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTDVKTPI 395
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++ NIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++ NIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
+ + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDD 267
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 268 CITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISNCVFDGT 326
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
L + +GRGG +E NI++ NIK E + + +K S+ P E + + P+
Sbjct: 327 DRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSK----MPAEPKSDRT-PEF 381
Query: 155 RGI--SFVNVFSVNT 167
R I S V V VNT
Sbjct: 382 RNIYVSGVTVRDVNT 396
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPF-------------RTIHPVYCSIAPNTDGIDPDCYIE- 46
+E M S +I I +L+ +SPF R +H +PNTDG DPD +
Sbjct: 146 IEFMYSKDIRIY-DLSMRDSPFWNNHFYDSERVHVRNVHISAKDNSPNTDGWDPDSARDV 204
Query: 47 --------SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
G+ VA+KSGWD G+A +PS NI +R V+ T + +G+ IG EMSG +
Sbjct: 205 LVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVN-CTGSKAGIAIGSEMSGGVE 263
Query: 99 NVTVD------------HLDTDKGRGGNIENI 118
+V V H+ T RGG + N+
Sbjct: 264 DVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 180 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 239
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 240 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 298
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 299 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPAEPKSERT-PIF 353
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 354 RNV-HISGMTVTNVKTPI 370
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 57/238 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+E +N ++LI + F +SPF IHP+ C S N DG DP
Sbjct: 198 LEPVNCTDVLI-EGVTFVDSPFWVIHPLACENVTVRGVTVDSYNLNNDGCDPESCTNVLI 256
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC +G+ +A+KSG D+D + RP+ N+ +R S + +GV IG E+SG + NV
Sbjct: 257 EDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRS-KANGVCIGSEISGGVRNV 315
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVKI------PIKISRGSNGHPD 143
V+ + ++ RGG IE++ + ++ + V+ P S HP
Sbjct: 316 VVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVEADSVRKTLVLFEPDYKSESRENHPT 375
Query: 144 EGRD-----------PKAIPKIRGISFVNV-------FSVNTTKAPICMKNVSLLVLA 183
R KA IRG + + V ++ +T P+ ++N + ++L+
Sbjct: 376 AFRGFVIEDVRAQWAGKAGIDIRGFADMPVRDVTISRLTLASTPEPVIVRNAAGIILS 433
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IENI +RN+
Sbjct: 340 DCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNV 372
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 214 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 273
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 274 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 332
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 333 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPVEPKSERT-PIF 387
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 388 RNVH-ISGMTVTNVKTPI 404
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+ L NIL+ SPF IHP+ S N DG DP
Sbjct: 212 INLYKCKNILL-EGFTLNRSPFWLIHPLLSENITVRKVKMQSHGYNNDGCDPESCRNVLI 270
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++G NV
Sbjct: 271 EDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGGCRNV 329
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V++ + ++ RGG +ENI IRNI++ K I H D+G
Sbjct: 330 WVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDDG-- 387
Query: 148 PKAIPKIRGISFVNVFS 164
+P I N+ S
Sbjct: 388 -PYLPYFHNIHLENITS 403
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+ L NIL+ SPF IHP+ S N DG DP
Sbjct: 212 INLYKCKNILL-EGFTLNRSPFWLIHPLLSENITVRKVKMQSHGYNNDGCDPESCRNVLI 270
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++G NV
Sbjct: 271 EDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGGCRNV 329
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V++ + ++ RGG +ENI IRNI++ K I H D+G
Sbjct: 330 WVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVDDG-- 387
Query: 148 PKAIPKIRGISFVNVFS 164
+P I N+ S
Sbjct: 388 -PYLPYFHNIHLENITS 403
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------CYIESGN 49
++I ++ NSPF IHP++C PN DG DP+ C ++G+
Sbjct: 225 VLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRGPNGDGCDPESCKNVLIENCTFDTGD 284
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG PS NI VR GV IG E+SG N+ V++
Sbjct: 285 DCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGH-GGVVIGSEISGGYRNLFVENCQMDS 343
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVK 129
+ T RGG IEN+ +RNI + + +
Sbjct: 344 PNLDRVIRIKTSTCRGGIIENVFVRNITVGQCR 376
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 35/156 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V + S+ ILI +L NSPF IHP+ + PN DG DP+
Sbjct: 214 VNFVESDGILI-KDLHLVNSPFWVIHPLLSKNITVDGVFVQNDGPNGDGCDPEACDGVLI 272
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+KSG ++DG +PS NI +R GV IG E+SG NV
Sbjct: 273 QNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCK-MADGHGGVVIGSEISGGCRNV 331
Query: 101 TVD-------HLD------TDKGRGGNIENIIIRNI 123
+ HLD T+ RGG IENI +RN+
Sbjct: 332 FAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMRNV 367
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 34/159 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 132 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 191
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 192 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 250
Query: 104 -------------HLDTDKGRGGNIENIIIRNIKMERVK 129
+ T RGG IEN+ +RN+ + + +
Sbjct: 251 DCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 289
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 44/198 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDCHISVGDD 264
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 265 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 323
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
+ + +GRGG +E N+++ NIK E V + +K S+ P E + + P
Sbjct: 324 DRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK----MPVEPKSERT-PIF 378
Query: 155 RGISFVNVFSVNTTKAPI 172
R + ++ +V K PI
Sbjct: 379 RNVH-ISGMTVTNVKTPI 395
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 35/157 (22%)
Query: 6 SNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYI 45
S N+LI +++ N+PF I+PV C + PN DG DP+ CY
Sbjct: 227 SKNVLI-ADVKIINAPFWNINPVLCENVTVRNVKVVTHGPNNDGCDPESCKNVLITGCYF 285
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG---RIF--NV 100
++G+ +A+KSG + DG +ARP+ N + GV IG E+SG IF N+
Sbjct: 286 DTGDDCIAIKSGRNEDGRNIARPAENHIIENCE-MKDGHGGVVIGSEISGGARNIFAQNL 344
Query: 101 TVD--------HLDTDKGRGGNIENIIIRNIKMERVK 129
+D L T RGG IEN+ +RN+++ K
Sbjct: 345 IMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYK 381
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 104 HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVF 163
+ T GRGG + N+ I N+ + + I I+ + HPDE DP A+P I I+ +V
Sbjct: 23 RIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEHPDEAYDPDALPLIERITIKDVI 82
Query: 164 SVNTTKAP------------ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQLQNK 211
N +A IC+ N+SL V + V W C V G++ V P C L+ +
Sbjct: 83 GENVKRAGLIQGIKGYDFVNICLSNISLNV-SSKVPWNCSDVKGYSDLVSPEVCEPLKER 141
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 38/161 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 198 IEGVKIVNSPFWTVNPEFCDNVTIKGITIDNVPSPNTDGINPESCRNVHISDCHISVGDD 257
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 258 CITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 316
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKIS 135
+ + +GRGG +E NI++ NIK E V + +K S
Sbjct: 317 ERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYS 357
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNV 372
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNV 372
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++I ++ N+P +HPV C ++ PN DG DP DCY ++G+
Sbjct: 234 VLIQDVKLINAPMWNLHPVLCENVTVERVKIETLGPNNDGCDPEACKNVLIKDCYFDTGD 293
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---- 105
+A+KSG + DG PS NI + GV IG E+SG NV +L
Sbjct: 294 DCIAIKSGRNEDGRIPGIPSENIIIEGCE-MKEGHGGVVIGSEISGGARNVFAQNLVMDS 352
Query: 106 ---------DTDKGRGGNIENIIIRNI 123
T RGG +ENI +R++
Sbjct: 353 PNLDRVLRIKTSSKRGGTVENIYMRDV 379
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 38/192 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
++ NS +I I+ + NSPF I+PV C + N DGIDP
Sbjct: 230 IQFYNSKDIRIMG-VHIVNSPFWEINPVLCENVWIKGVHIETDLYNNDGIDPESSRNVLI 288
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DCY +G+ +A+KSG + DG + P++N+ +R + G+ +G E+SG + +V
Sbjct: 289 EDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRH-NRFANGHGGITLGSEISGGVHDV 347
Query: 101 --TVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
T +H D T+ RGG +EN+ +++ + + ++ + ++ +EG
Sbjct: 348 FATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKDSVVNKARLAVV---HADFFYEEGHA 404
Query: 148 PKAIPKIRGISF 159
+ +P++ I+
Sbjct: 405 GENLPQLDNITL 416
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 34/155 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 211 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 270
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 271 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 329
Query: 104 -------------HLDTDKGRGGNIENIIIRNIKM 125
+ T RGG IEN+ +RN+ +
Sbjct: 330 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTV 364
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + SPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 247 VLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSDGCDPESCTNVLISNCTFDTGD 306
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---- 105
+A+KSG + DG + P SNI + GV IG E+SG + N+ H
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISGGVENLYAQHCTMSS 365
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D+G RGG+++N+ RNI + VK + + N +EG K P +
Sbjct: 366 PDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVV----NFFYEEGDAGKFPPLLED 421
Query: 157 ISFVNVFSVNTTKA 170
I+ N+ + +A
Sbjct: 422 ITIENLNVASANRA 435
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
++S + ++I + NSPF IHP++C PN DG DP+ C
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRGPNGDGCDPESCKNVLIENC 280
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 281 TFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH-GGVVIGSEISGGYRNLFVE 339
Query: 104 -------------HLDTDKGRGGNIENIIIRNI 123
+ T RGG IEN+ +RN+
Sbjct: 340 DCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNV 372
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 38/161 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDP---------DCYIESGNG 50
I + NSPF T++P +C +PNTDGI+P DC+I G+
Sbjct: 206 IEGVKIINSPFWTVNPEFCDNVVVTGVTIHNVPSPNTDGINPESCRNVHISDCHISVGDD 265
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------ 104
+ +KSG D + P NI + + + GV IG EMSG + VT+ +
Sbjct: 266 CITLKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISNCVFDGT 324
Query: 105 -----LDTDKGRGGNIE-----NIIIRNIKMERVKIPIKIS 135
+ + +GRGG +E NII+ NIK E V + +K S
Sbjct: 325 DRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYS 365
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFS 164
+ T GRGG ++NI R M+ +K ++ HP G DPKA+P+I I++ ++ +
Sbjct: 967 IKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGGFDPKALPEISNINYRDMTA 1026
Query: 165 VNTTKAP------------ICMKNVSLLVLAP---SVKWQCQFVSGFNGQVFPLPCPQLQ 209
N T + +CM NV+ + L+P ++W C VSG +V P PC L
Sbjct: 1027 ENVTISAKLEGIKNDPFTGLCMSNVT-IALSPDPKKLQWNCTDVSGVTSRVKPEPCSLLP 1085
Query: 210 NKSSSW-CSF 218
+K ++ C F
Sbjct: 1086 DKGTTMDCDF 1095
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+E N+LI + NSP IHP C S+ N DG DP
Sbjct: 210 IEPYRCKNVLI-EGVTIVNSPMWEIHPTLCTNVTVRGVTVHSLGTNNDGCDPESCHDVLI 268
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG ++DG + + NI +RR + GV IG E+SG + NV
Sbjct: 269 EDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCT-MKDGHGGVTIGSEVSGGVRNV 327
Query: 101 TVDHLDTDKG-------------RGGNIENIIIRNIKMERV 128
V D RGG IENI + +K+ RV
Sbjct: 328 FVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKIGRV 368
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDP---------DCYIESGN 49
++I + +SP IHPV + PNTDG++P DCY ++G+
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGD 283
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + PS NI +RR + GV IG E+SG + + ++
Sbjct: 284 DCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISGGVRYIYAENNVMDS 342
Query: 105 --------LDTDKGRGGNIENIIIRN-----IKMERVKIPIKISRGSNG 140
+ T+ RGG IE+I +N +K E V I + G G
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAG 391
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 41/221 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
++I + NS F H +Y APNTDG++ DC +
Sbjct: 174 VVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---H 104
G+ + +KSG D DG + RP+ ++ +R G+ G E++G + NV V
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVVVTGCIF 292
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
DTD+G RGG +EN++I I MERV +P+ + N + G DP +
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVV----NLYYRCGIDPGEEEIVSR 348
Query: 157 ISFVNVFSVNTTKAPICMKNVSL-LVLAPSVKWQCQFVSGF 196
++ + V+ T + +N+S+ VLA VK F+ G
Sbjct: 349 LASLLPLPVDETTPAV--RNISISQVLATGVKSSAGFLLGL 387
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 34/159 (21%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDPD---------C 43
+ S + ++I ++ NSPF IHP++C PN DG DP+ C
Sbjct: 219 LYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRGPNGDGCDPESCKNVLIENC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V+
Sbjct: 279 TFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGH-GGVVIGSEISGGYRNLFVE 337
Query: 104 H-------------LDTDKGRGGNIENIIIRNIKMERVK 129
+ + T RGG IEN+ +R+I + + +
Sbjct: 338 NCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCR 376
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 51/252 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
++ +N NI + N+ NSPF H +CS APNTDG++ D
Sbjct: 168 IQFLNCKNI-TLQNVTLQNSPFWNTHFAFCSDCTITGVHFINPKEAPNTDGLNIDSCSSI 226
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C + G+ + +KSG DGI + RP+ NI + + GV IG E +G I
Sbjct: 227 TIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGH-GGVVIGSETAGGIN 285
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
N+ + + + T +GRGG IENI + + M+ + P+ + N + G
Sbjct: 286 NIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKNILCPLVV----NCYYGPGGP 341
Query: 148 PKAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPLPCPQ 207
+ P +FS++ + + ++ + C+ + F + LP
Sbjct: 342 KSSSP---------IFSLDPQPLSATTPKIQNIYISHLIAEHCRAAAAF---IVGLPEQP 389
Query: 208 LQNKSSSWCSFL 219
++N S C F+
Sbjct: 390 IKNLYISECKFI 401
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 34/159 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
+ + + NSPF H VYC PN DG+D D C+ +
Sbjct: 173 VTLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDV 232
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A KSG + DG +ARP+ N+AV + G+ +G E SG I N+ V +
Sbjct: 233 GDDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGH-GGIVMGSENSGGIRNIAVSNCVF 291
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
L T++ RG I +I+I NI M+ V P+ I+
Sbjct: 292 IGTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAIN 330
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGGN+E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 32/152 (21%)
Query: 12 ISNLAFCNSPFRTIHPVYCSIA-----------PNTDGIDPD---------CYIESGNGL 51
I + +SPF IHP++CS N DG DP+ C +G+
Sbjct: 213 IEGVTIIDSPFWVIHPIFCSNVIVRNVTVDSHNYNNDGCDPESCRNVLIEGCTFSTGDDA 272
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKG- 110
+A+KSG D+D + +P+ N+ +R S + +GV IG E++G + N+ ++++ K
Sbjct: 273 IAIKSGRDNDAWRIGQPTENVVIRNCSFRS-KINGVCIGSEIAGGVRNIFIENITIPKSS 331
Query: 111 ----------RGGNIENIIIRNIKMERVKIPI 132
RG I+++ +RN++ + V+ +
Sbjct: 332 NAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL 363
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGGN+E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD----- 42
+E+M S+ + I SNL +SP +HPVYCS PNTDGI+PD
Sbjct: 187 IEIMFSDQVQI-SNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPNTDGINPDSCANV 245
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAM---------------ARPSSNIAVRRVSGTTPT 83
CYI SG+ +AVKSGWD GI + I R+ S
Sbjct: 246 KIEDCYIVSGDDCIAVKSGWDQYGIKYGAWEGEAIGRGEWGGSEEYRAINCRKHSAVLTD 305
Query: 84 CSGVGIGREMSGRIFNVTVDHLDTDKGRGG 113
G G+ M+ + F + +L G GG
Sbjct: 306 FGAKGDGKTMNTKAFKSAIANLSQVAGDGG 335
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 23/89 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPD----- 42
+E+M S+ + I SNL +SP +HP Y S IAP NTDGI+PD
Sbjct: 439 IEIMYSDQVQI-SNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNV 497
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMAR 67
C+I SG+ +AVKSGWD GI +
Sbjct: 498 LIEDCFIVSGDDCIAVKSGWDQYGIKCGK 526
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 10 LIISNLAFCNSPFRTIHPV----------YC-SIAPNTDGIDP---------DCYIESGN 49
+++ + N+PF IHPV +C S PN+DG DP DC ++G+
Sbjct: 238 ILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQSYGPNSDGCDPESCERVVIEDCVFDTGD 297
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + P ++ V+ GV IG E+SG + NV V H
Sbjct: 298 DCIALKSGRNADGRRIGVPCKDVVVQNCH-MKEGHGGVVIGSEISGGVANVHVRHCTMDS 356
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IE++ I + VK I N + +EG K +P +R
Sbjct: 357 PHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVI----NFYYEEGDRGKWMPLVRD 412
Query: 157 ISFVNV 162
I ++
Sbjct: 413 IEITDL 418
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 40/178 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDP-------- 41
++ N NILI + +SP +HPV PNTDG++P
Sbjct: 216 IQPYNCQNILI-EGVTVKDSPMWQVHPVLSENVIVRGVNIIGHGPNTDGVNPESCRHVLI 274
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DCY ++G+ +A+KSG + DG + PS NI +RR + GV IG E+SG + V
Sbjct: 275 EDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NTMRDGHGGVTIGSEISGGVKYV 333
Query: 101 TVD-------------HLDTDKGRGGNIENIIIRN-----IKMERVKIPIKISRGSNG 140
+ + T+ RGG IE+I +N +K E V I + G G
Sbjct: 334 YAEDNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEEGDAG 391
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 32/152 (21%)
Query: 12 ISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGNGL 51
I + +SPF IHP++C S N DG DP+ C +G+
Sbjct: 213 IEGVTIMDSPFWVIHPIFCNNVIVRNVTVDSHNYNNDGCDPESCRNVLIEGCTFSTGDDA 272
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKG- 110
+A+KSG D+D + +P+ N+ +R S + +GV IG E++G + N+ ++++ K
Sbjct: 273 IAIKSGRDNDAWRIGQPTENVVIRNCSFRS-KINGVCIGSEIAGGVRNIFIENITIPKSS 331
Query: 111 ----------RGGNIENIIIRNIKMERVKIPI 132
RG I+++ +RN++ + V+ +
Sbjct: 332 NAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL 363
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------CYIESGN 49
++I + NSP +HPV C PNTDG++P+ C+ ++G+
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKNVVIKGCHFDNGD 253
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+AVKSG + DG + PS NI + + GV IG E+SG + NV +
Sbjct: 254 DCIAVKSGRNADGRRINMPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNVIAEGNLMDS 312
Query: 104 -------HLDTDKGRGGNIENII-----IRNIKMERVKIPIKISRGSNG 140
+ T+ RGG +ENI ++++K E + I ++ G G
Sbjct: 313 PNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAG 361
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFS 164
+ T GRGG ++++ +R + M +K ++ HPDE DPKA+P I+ I++ ++ +
Sbjct: 1 IKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVA 60
Query: 165 VNTTKAP------------ICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLPC---PQ 207
N T IC+ NV++ + K W C VSG+ V P PC P+
Sbjct: 61 ENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 120
Query: 208 LQNKSSSWCSFLE 220
Q + C+F E
Sbjct: 121 KQPGTIVPCNFPE 133
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ IS+L SP T+HP+ C + +PNTDGIDP+ C I+
Sbjct: 146 ITISDLNLTMSPSWTVHPMECYDVTIQNISILNPADSPNTDGIDPESCKNLRILNCNIDV 205
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + + + NI + + V +G EMSG I NVT+ +
Sbjct: 206 GDDCIAIKSGTEQTTTSKS-ACENITISNCT-MVHGHGAVVLGSEMSGNIRNVTISNCVF 263
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDP---- 148
+ T +GRGG +ENI + I ME V P I+ G G D
Sbjct: 264 QQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGPKGKEKYVWDKNPYP 323
Query: 149 --KAIPKIRGISFVNVFS 164
K P R I F N+ +
Sbjct: 324 ITKETPCFRSIHFSNIVA 341
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 42/211 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV---YCSI--------APNTDGIDPD------- 42
+E + N+LI + F N+PF IHP+ Y ++ PN DG DP+
Sbjct: 235 LETLECENVLI-QGVTFTNAPFWVIHPLKSKYVTVDGVTVNSHGPNNDGCDPEYSKYVHI 293
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + DG + PS NI V GV +G E+S + NV
Sbjct: 294 TNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCD-MKDGHGGVVMGSEISAGVRNV 352
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVK---IPIKISRGSNGHPDE 144
V + + T+ RGG +EN+ +++I++ +VK + I G G
Sbjct: 353 FVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIYGK--- 409
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKAPICMK 175
++ + IP I+ I+ NV N K + ++
Sbjct: 410 -QEGEFIPTIQNINLENVTVENGGKYGLLIQ 439
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 37/185 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-----------PNTDGIDP---------DCYIESGN 49
+ I ++ NSPF IH + A N DGIDP D + +G+
Sbjct: 199 ITIEDVFITNSPFWCIHLLQSENAILRSIRFDAKLVNNDGIDPEMSRNVLIEDVHFNNGD 258
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--- 106
VA+KSG DHDG A PS NI +R V +G EMS I NV V++ D
Sbjct: 259 DNVAIKSGRDHDGRGTACPSENIIIRNCH--FKGLHAVVLGSEMSAGIQNVYVENCDYAG 316
Query: 107 ---------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGI 157
T+ RGG I NI +N + + V+ I+ G EG+D I I
Sbjct: 317 YCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGG---EGQDNTFFTDIENI 373
Query: 158 SFVNV 162
+ N+
Sbjct: 374 TVENI 378
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 35/168 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY--------CSI-----APNTDGIDPD----- 42
V++ +S++IL+ + +SPF T+HP+Y SI APNTDGID D
Sbjct: 165 VQVKDSSDILL-EGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDGIDLDSCENV 223
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C I+ G+ +A+KSG DGI RP+ ++ + + + G IG E + I
Sbjct: 224 TIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCT-VRNAHGGAVIGSETAAGIH 282
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
NV V + + T +GRGG I ++ +KM + P+ I+
Sbjct: 283 NVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTIN 330
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 38/193 (19%)
Query: 6 SNNILIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGIDPD---------CYI 45
S NILI ++ NSPF I+PV C N DG+DP+ CY
Sbjct: 250 SKNILI-KDVKIINSPFWEINPVLCENIKVDNIKVGTNLYNNDGVDPESCKDMIIENCYF 308
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV----- 100
+G+ +A+KSG +++G + P+ N+ + R + G+ IG E+SG + ++
Sbjct: 309 LTGDDCIAIKSGRNNEGRNIGVPTENVII-RYNEFKDGHGGITIGSEISGGVNDIFAHDN 367
Query: 101 -----TVDH---LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIP 152
+D+ T+ RGG +ENI ++N + + KI + ++ +EG + P
Sbjct: 368 YFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAV---IHADFFYEEGTNGDHKP 424
Query: 153 KIRGISFVNVFSV 165
+R I+ N+ +V
Sbjct: 425 ILRNITLENIKTV 437
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
++I + NS F H +Y APNTDG++ DC +
Sbjct: 174 VVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---H 104
G+ + +KSG D DG + RP+ ++ +R G+ G E++G + NV V
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVVVTGCIF 292
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
DTD+G RGG +EN+++ I MERV +P+ + N + G DP I
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVV----NLYYRCGIDPGEEETISR 348
Query: 157 ISFVNVFSVNTTKAPICMKNVSL-LVLAPSVKWQCQFVSGF 196
++ + V+ T + +N+S+ V A VK F+ G
Sbjct: 349 LASLLPLPVDETTPAV--RNISISQVFATGVKSSAGFLLGL 387
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 39/169 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+++++S + + + SPF T+HPV+ S APNTDGID D
Sbjct: 165 LQILDSTRV-TVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGIDIDSCQDV 223
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS--GVGIGREMSGR 96
C ++ G+ +A+KSG DGIA RP+ N+ RVSG T + G+ IG E +
Sbjct: 224 MVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNV---RVSGCTVRSAHGGIVIGSETAAG 280
Query: 97 IFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKI 134
I + + + T +GRGG I ++ + M P+ I
Sbjct: 281 ISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAI 329
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-----------APNTDGIDP---------DCYIESGN 49
++I + +SP IHPV PNTDG++P DCY ++G+
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGD 283
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + PS NI +RR + GV IG E+SG + V ++
Sbjct: 284 DCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISGGVRYVYAENNVMDS 342
Query: 105 --------LDTDKGRGGNIENIIIRN-----IKMERVKIPIKISRGSNG 140
+ T+ RGG IE+I +N +K E V I + G G
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAG 391
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 10 LIISNLAFCNSPFRTIHP----------VY-CSIAPNTDGIDPD---------CYIESGN 49
++I ++ NSPF IHP VY + PN DG DP+ C +G+
Sbjct: 222 ILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGD 281
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +PS NI +R GV IG E+SG NV +
Sbjct: 282 DCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGGCENVYAEDCYMDS 340
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG I+NI +RN+K+ + K + + + P E P +R
Sbjct: 341 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 399
Query: 157 ISFVNV 162
++ NV
Sbjct: 400 VNMENV 405
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 10 LIISNLAFCNSPFRTIHP----------VY-CSIAPNTDGIDPD---------CYIESGN 49
++I ++ NSPF IHP VY + PN DG DP+ C +G+
Sbjct: 242 ILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGD 301
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +PS NI +R GV IG E+SG NV +
Sbjct: 302 DCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGGCENVYAEDCYMDS 360
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG I+NI +RN+K+ + K + + + P E P +R
Sbjct: 361 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 419
Query: 157 ISFVNV 162
++ NV
Sbjct: 420 VNMENV 425
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 44/162 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDP---------DCYIES 47
+ I ++A NSP T+HP C + +PNTDGIDP DC+I+
Sbjct: 141 VTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCHIDV 200
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + R +A V+ T T GV IG EMSG + NV +
Sbjct: 201 GDDCIALKAGTE-------RTPDRVATENVTITGCTMVRGHGGVVIGSEMSGGVRNVVIS 253
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI 134
+ L T + RGG +EN+ + I M+ V P+ +
Sbjct: 254 NCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTV 295
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------CYIESGN 49
++I + NSP +HPV C PNTDG++P+ C+ ++G+
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKNVVIKGCHFDNGD 253
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+AVKSG + DG + PS NI + + GV IG E+SG + NV +
Sbjct: 254 DCIAVKSGRNADGRRINIPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNVIAEGNLMDS 312
Query: 104 -------HLDTDKGRGGNIENII-----IRNIKMERVKIPIKISRGSNG 140
+ T+ RGG +ENI ++++K E + I ++ G G
Sbjct: 313 PNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAG 361
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 10 LIISNLAFCNSPFRTIHP----------VY-CSIAPNTDGIDPD---------CYIESGN 49
++I ++ NSPF IHP VY + PN DG DP+ C +G+
Sbjct: 212 ILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGD 271
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +PS NI +R GV IG E+SG NV +
Sbjct: 272 DCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGGCENVYAEDCYMDS 330
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG I+NI +RN+K+ + K + + + P E P +R
Sbjct: 331 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 389
Query: 157 ISFVNV 162
++ NV
Sbjct: 390 VNMENV 395
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++I ++ SPF +HPV C S PN DGIDP DC+ +G+
Sbjct: 226 VLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINSHGPNNDGIDPESCDHVLIEDCFFSTGD 285
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV-----TVDH 104
+A+ SG + DG + P N+ +R G+ IG ++SG + NV +D
Sbjct: 286 DCIALNSGRNEDGRRVGVPCQNVVIRGCR-MADGHGGLTIGSQISGHVRNVFAENCRLDS 344
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D RGG +E + RN+++ +V+ + + + +EG + + P +R
Sbjct: 345 PDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVT---VDFNYEEGANGRFKPVLRD 401
Query: 157 ISFVNVFSVNTTKA 170
+ NV S + +A
Sbjct: 402 VLIENVRSGRSRRA 415
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
V+ N NILI ++ NSP ++PV C S PN DG DP
Sbjct: 223 VQPYNCKNILI-EDIKMINSPMWNLNPVLCENVTIERVKVISHGPNNDGCDPEACKNVLI 281
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DCY ++G+ +A+KSG D DG + RP+ N + GV IG E++G N+
Sbjct: 282 KDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSEIAGGARNI 340
Query: 101 T-------------VDHLDTDKGRGGNIENIIIRNIKMERVK 129
+ L T RGG IEN+ ++++++ K
Sbjct: 341 YALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 35/167 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP-------- 41
++L N+ I + NSPF IH + Y + N DGIDP
Sbjct: 213 IQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLVNNDGIDPESSRNVLI 271
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMSG + NV
Sbjct: 272 EDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMSGGVRNV 329
Query: 101 TVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V+ ++ T+ RGG ++NI +++ + + V+ I ++
Sbjct: 330 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVT 376
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPDC----- 43
V+ S+ IL+ S + NSP IHPV PN+DG++P+
Sbjct: 225 VQFYRSSTILV-SGVTLTNSPMWMIHPVLSENVLVDGVTLDSPDGPNSDGVNPESSRNVV 283
Query: 44 ----YIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGREMSGR 96
+G+ +AVKSG + DG + PS NI + R +G GV IG EMSG
Sbjct: 284 IRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAG----HGGVVIGSEMSGD 339
Query: 97 IFNVTVD-------HLD------TDKGRGGNIENIIIRNIKMERVKIP-IKISRGSNGHP 142
+ NV + HLD T+ RGG +E + R+ + V I+I N H
Sbjct: 340 VRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPAVADAVIRI----NFHY 395
Query: 143 DEGRDPKAIPKIRGISFVNVFSV 165
+EG P +RGI NV SV
Sbjct: 396 EEGDVGDFTPTVRGIHIDNVHSV 418
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------CYIESGN 49
++I + NSP +HPV C PNTDG++P+ C+ +SG+
Sbjct: 194 ILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKNVVIKGCHFDSGD 253
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+AVKSG + D + PS NI + + GV IG E+SG + NV +
Sbjct: 254 DCIAVKSGRNADARRINMPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNVIAEGNLMDS 312
Query: 104 -------HLDTDKGRGGNIENII-----IRNIKMERVKIPIKISRGSNG 140
+ T+ RGG +ENI ++++K E + I ++ G G
Sbjct: 313 PNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAG 361
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPD-------- 42
L+ +++ + + +L SPF +H Y + P+TDGID D
Sbjct: 155 LIYNSSQVTLRDLTLRRSPFWNVHICYSTDVYVSGLVIKDNEGPSTDGIDVDSSRNVLIE 214
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C IE + + +K+G D DG+ + RPS NI VR S + +GV IG E SG I NV
Sbjct: 215 NCNIECNDDNICIKAGRDADGLRVNRPSENIVVRNCS--IGSGAGVTIGSETSGSIRNVE 272
Query: 102 VDHLD---TDKG--------RGGNIENIIIRNIKMERVKIP 131
+ + TD G RGG IENI + + +M V P
Sbjct: 273 IYQIKANGTDGGFRIKSALTRGGVIENIRVHDFEMVNVLRP 313
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + SPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 247 VLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSDGCDPESCTNVLISNCTFDTGD 306
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---- 105
+A+KSG + DG + P SNI + GV IG E+SG + N+ H
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISGGVENLYAQHCTMSS 365
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D+G RGG+++N+ RNI + VK + + N +EG P +
Sbjct: 366 PDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVV----NFFYEEGDAGNFPPLLED 421
Query: 157 ISFVNVFSVNTTKA 170
I+ N+ + +A
Sbjct: 422 ITIENLNVASANRA 435
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
+++ ++ F N+PF +HP+ S PN DG DP+ C ++G+
Sbjct: 228 ILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRSHGPNNDGCDPEYSKNVHIKNCLFDTGD 287
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + PS NI V GV +G E+S + NV V +
Sbjct: 288 DCIAIKSGRNDDGRRVNIPSENIVVENCE-MKDGHGGVVMGSEISAGVRNVYVRNCKMDS 346
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVK 129
+ T+ RGG +EN+ ++NI++ +VK
Sbjct: 347 PNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVK 379
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 35/167 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP-------- 41
++L N+ I + NSPF IH + Y + N DGIDP
Sbjct: 201 IQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLVNNDGIDPESSRNVLI 259
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMSG + NV
Sbjct: 260 EDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMSGGVRNV 317
Query: 101 TVDHLD------------TDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V+ D T+ RGG ++NI +++ + + V+ I ++
Sbjct: 318 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVT 364
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC---------YIES 47
N + +S + +SPF IHP+ C + PN DG DP+ + +
Sbjct: 222 NRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEACENVLIQNTHFHT 281
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +A+KSG ++DG +PS NI +R G+ IG E+SG NV +
Sbjct: 282 GDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGGCKNVYAEDCTM 340
Query: 104 ---HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
HLD T+ RGG IENI +R +K+ + K + + + P+E P++
Sbjct: 341 DSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPEEPCYRGFEPEV 399
Query: 155 RGISFVNV 162
R ++ +V
Sbjct: 400 RDVNIEDV 407
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 35/167 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP-------- 41
++L N+ I + NSPF IH + Y + N DGIDP
Sbjct: 201 IQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLVNNDGIDPESSRNVLI 259
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMSG + NV
Sbjct: 260 EDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMSGGVRNV 317
Query: 101 TVDHLD------------TDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V+ D T+ RGG ++NI +++ + + V+ I ++
Sbjct: 318 FVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVT 364
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 87/209 (41%), Gaps = 48/209 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD------- 42
V+ S NILI + F NSP +HPV PN DG DP+
Sbjct: 215 VQFYKSKNILI-EGVTFKNSPMWFLHPVLSENIIIRNVKTIGHGPNNDGCDPESCKNVLI 273
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
CY ++G+ +A+KSG ++DG + PS NI +R + GV IG E+SG V
Sbjct: 274 EGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCT-MKDGHGGVVIGSEISGGCRFV 332
Query: 101 TVDHLDTDKG-------------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ D RGG +E++ +RNI++ V I + D
Sbjct: 333 FAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAIV-------RMNMFYD 385
Query: 148 PKAI------PKIRGISFVNVFSVNTTKA 170
PK I PK R I NV S + A
Sbjct: 386 PKEIGPRDFPPKFRNIRVENVTSRKSDYA 414
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC---------YIES 47
N + +S + +SPF IHP+ C + PN DG DP+ + +
Sbjct: 220 NRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEACENVLIQNTHFHT 279
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +A+KSG ++DG +PS NI +R G+ IG E+SG NV +
Sbjct: 280 GDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGGCKNVYAEDCTM 338
Query: 104 ---HLD------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
HLD T+ RGG IENI +R +K+ + K + + + P+E P++
Sbjct: 339 DSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPEEPCYRGFEPEV 397
Query: 155 RGISFVNV 162
R ++ +V
Sbjct: 398 RDVNVEDV 405
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 46/217 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
+N N + + + NSP IHP + +PNTDG+DP+
Sbjct: 226 FLNHCNNITVQGITVKNSPCWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLI 285
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
Y G+ +A+KSG + G RPS N+ +R+ S + IG EM+G + N+
Sbjct: 286 VGVYFSLGDDCIAIKSGKIYMGAKHKRPSENLEIRQCCMRDGHGS-ITIGSEMAGGVKNL 344
Query: 101 TVD-----HLD------TDKGRGGN--IENIIIRNIKMERVKIPIKIS----RGSNGHPD 143
TV H D T +GRG + I+ ++ NI+M+ V P+ I+ +GH +
Sbjct: 345 TVRECLFIHTDRGLRIKTRRGRGKDAIIDGVLFENIRMDHVMTPVVINCFYFCDPDGHSE 404
Query: 144 --EGRDPKAI----PKIRGISFVNVFSVNTTKAPICM 174
+ ++P + P I ++F N+ N A M
Sbjct: 405 YVQSKNPYEVDDRTPHIGELTFRNLDCTNCHAAASYM 441
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
+N ++I + NSP T+HP++C +PNTDGI+P+
Sbjct: 224 FLNRCKNILIEGITIRNSPSWTVHPLFCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLI 283
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C I G+ VAVK+G PS NI +R V IG EMS + NV
Sbjct: 284 AGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEIRNCL-MEHGHGAVVIGSEMSCGVRNV 342
Query: 101 TVDH---LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPK 149
V + ++TD+G RGG ++ I ++N++M V +P+ I+ N D DP
Sbjct: 343 KVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNVQMNGVFVPLAINCFYNCGAD--YDP- 399
Query: 150 AIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVKWQCQFVSGF 196
+ ++ VN T I MKN VL VK FV G
Sbjct: 400 LYSSDKVVADVN--ERTPTIGSIVMKN----VLCEDVKSMAAFVYGL 440
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
V+ N NILI ++ NSP ++PV C S PN DG DP
Sbjct: 223 VQPYNCKNILI-EDIRMINSPMWNLNPVLCENVTIERVKVISHGPNNDGCDPEACKNVLI 281
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DCY ++G+ +A+KSG D DG + RP+ N + GV IG E++G N+
Sbjct: 282 KDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSEIAGGARNI 340
Query: 101 T-------------VDHLDTDKGRGGNIENIIIRNIKMERVK 129
+ L T RGG IEN+ ++++++ K
Sbjct: 341 YALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 47/200 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC---------SIAP----NTDGIDPD----- 42
++L N+ N+ I + F +SP TIH +Y SIAP NTDG+ D
Sbjct: 193 LQLYNAENVTI-EGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTDGVVVDSSSDV 251
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIA-----VRRVSGTTPTCSGVGIGREM 93
C I+ G+ + +KSG D +G + PS NI ++R G G IG EM
Sbjct: 252 EVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHG------GFVIGSEM 305
Query: 94 SGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMER-VKIPIKISRGSNGH 141
SG + NV++ + T +GRGG IEN+ + NI M + + +
Sbjct: 306 SGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVDMFYEKR 365
Query: 142 PDEGRDPKAIPKIRGISFVN 161
P E + PKIRG+ N
Sbjct: 366 PVEPVSERT-PKIRGVVIRN 384
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
+ + N+ SP TI+P+ CS A PNTDGIDP+ C+I+
Sbjct: 140 ITVKNIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KKAYPIDERTPAFRRIHFSNITARN 336
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 34/151 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGNGL 51
I+++ NSP ++PV C S PN DG DP DCY ++G+
Sbjct: 244 IADVKLINSPMWNLNPVLCENVLIEKVKVISHGPNNDGCDPEACKNVWIRDCYFDTGDDC 303
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT---------- 101
+A+KSG D DG + RP+ N + GV IG E++G N+
Sbjct: 304 IAIKSGRDEDGRNIGRPAENHIIENCV-MKDGHGGVVIGSEIAGGAKNIYAINCEMDSPN 362
Query: 102 ---VDHLDTDKGRGGNIENIIIRNIKMERVK 129
V + T RGG IEN+ ++N+++ K
Sbjct: 363 LDRVLRIKTSSSRGGIIENVFMKNVQVGTFK 393
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 47/187 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------CYIESGN 49
+ I + NSP IHPV C PNTDG+DP+ C ++G+
Sbjct: 194 VFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIGHGPNTDGVDPESCKSMIIKNCLFDNGD 253
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG + DG + PS NI + + GV IG E+SG + NV +
Sbjct: 254 DCIAIKSGRNADGRRINVPSENIVIEN-NEMKDGHGGVTIGSEISGGVKNVFAEGNLMDS 312
Query: 104 -------HLDTDKGRGGNIENI-----IIRNIKMERVKIPIKISRGSNGHPDEGRDPKAI 151
+ T+ RGG ++NI +++++K E + I ++ G G +
Sbjct: 313 PNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEEGDAG--------EFK 364
Query: 152 PKIRGIS 158
P +RGI
Sbjct: 365 PVVRGIE 371
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 47/164 (28%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++I +++ +SPF TIHP+ C + N DG+DP DC + G+
Sbjct: 221 VLIEDISIEDSPFWTIHPLLCRDVVIRRVKVRAHGHNNDGVDPEMSQNVLIEDCVFDQGD 280
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
V+VKSG D D + P+ N+ +R R+ + +G E+SG I N+ VD
Sbjct: 281 DAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGHQL---MAVGSELSGGIENIFVDNCHF 337
Query: 104 ------------------HLDTDKGRGGNIENIIIRNIKMERVK 129
++ T++ RGG ++NI +RN+ +++
Sbjct: 338 VGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + SPF ++PV C S PN+DG DP+ C ++G+
Sbjct: 247 VLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSDGCDPESCTNVIISNCTFDTGD 306
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV-----TVDH 104
+A+KSG + DG + P SNI + GV IG E+SG + N+ T+
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIIIEHCE-MKAGHGGVVIGSEISGGVENLYAQYCTMSS 365
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
D D+G RGG+++N+ RNI + VK + + N +EG P +
Sbjct: 366 PDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVV----NFFYEEGDAGNFPPLLED 421
Query: 157 ISFVNVFSVNTTKA 170
I+ N+ V+ +A
Sbjct: 422 ITIENLNVVSANRA 435
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 48/203 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----------CYIE 46
++I L NSP IHP + +PNTDG+DP+ C+
Sbjct: 246 VVIQGLTLRNSPSWNIHPYFSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICF-S 304
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV---- 102
G+ +AVKSG + G RPS +I V R S V IG EM+G + N+TV
Sbjct: 305 VGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRDGHGS-VTIGSEMAGGVKNLTVRDCV 363
Query: 103 -DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPD--------EG 145
H D T +GRG N ++ I+ I M++VK P I+ PD +
Sbjct: 364 FRHTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKE 423
Query: 146 RDP--KAIPKIRGISFVNVFSVN 166
R P P I+ ++F ++ +VN
Sbjct: 424 RLPVDDRTPWIKHLTFRDIEAVN 446
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 12 ISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGNGL 51
I ++ NSP +HPV C S PN DG DP+ C ++G+
Sbjct: 225 IEDVTITNSPMYEMHPVLCRNVIARNVKVSSHGPNNDGCDPESSVDVLIDGCTFDTGDDC 284
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKG- 110
+A+KSG + DG + PS N+ V+ GV +G E SG I NV D
Sbjct: 285 IAIKSGRNADGRRLHSPSENLIVQNCV-MKDGHGGVTMGSECSGGIRNVFAQDCQMDSPN 343
Query: 111 ------------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGIS 158
RGG IE++ +RN+K +V + + + + +EG P +R +
Sbjct: 344 LNVALRFKNNAVRGGVIEHVYMRNVKAGQVA---QAAIDVDFYYEEGEKGSFTPVVRDVE 400
Query: 159 FVNV 162
VN+
Sbjct: 401 VVNL 404
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 46/210 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIES 47
+ + + NSP IHP + +PNTDG+DP+ Y
Sbjct: 235 VTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSL 294
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +AVKSG + G RPS +I++RR S V IG EM+G + N+TV
Sbjct: 295 GDDCIAVKSGKIYMGSTYKRPSKDISIRRCCMRDGHGS-VTIGSEMAGGVKNLTVKDCMF 353
Query: 104 -HLD------TDKGRGGN--IENIIIRNIKMERVKIPIKIS----RGSNGHPDEGRDPKA 150
H D T +GRG + ++ I+ +I+M+ V P I+ +GH + R +A
Sbjct: 354 LHTDRGLRIKTRRGRGKDAVVDGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEA 413
Query: 151 I------PKIRGISFVNVFSVNTTKAPICM 174
+ P I+ + F ++ + N A M
Sbjct: 414 LLVDERTPLIKSLCFKDIEAENCHVAAAYM 443
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 84/203 (41%), Gaps = 48/203 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDP---------DCYIESGN 49
I + +SP T+HP C + +PNTDGI+P DC I+ G+
Sbjct: 149 IEQVKMIDSPSWTVHPNDCDNVTISGVSIVNPANSPNTDGINPESCRNVKISDCSIDVGD 208
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+K+G + A P NI + + GV G EMSG I NV V +
Sbjct: 209 DCIAIKAG--TEDAERAIPCENITITNCT-MLHGHGGVVFGSEMSGDIRNVVVSNCIFEG 265
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA-------- 150
+ +GRGG IENI + NI M V P ++ H G +P
Sbjct: 266 TDRGIRFKSRRGRGGTIENIRVNNIVMNNVICPFILNL-YYYHGPRGMEPYVWDKEVQPV 324
Query: 151 ---IPKIRGISFVNVFSVNTTKA 170
PK R I F N+ + + T A
Sbjct: 325 TALTPKFRHIHFSNITATDVTAA 347
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFS 164
+ T GRGG I++I R M+ +K ++ HP G DPKA+P+I I + ++ +
Sbjct: 966 IKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGGFDPKALPEISNIHYRDMTA 1025
Query: 165 VNTTKAP------------ICMKNVSLLVLAP---SVKWQCQFVSGFNGQVFPLPCPQLQ 209
N T + +CM +V+ + L+P ++W C VSG +V P PC L
Sbjct: 1026 ENVTISAKLERIKNGPFTGLCMSSVT-IALSPDPKKLQWNCTDVSGVTSRVTPEPCSLLP 1084
Query: 210 NKSSSWCSFLEF 221
+K ++ S +F
Sbjct: 1085 DKRTTMDSDCDF 1096
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 47/203 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPDCY---- 44
V+ S++IL+ S + NSP IHPV PN+DG++P+
Sbjct: 227 VQFYRSSDILV-SGVTLTNSPMWMIHPVLSENVIVDGVTLDSPDGPNSDGVNPESSRNVV 285
Query: 45 -----IESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGREMSGR 96
++G+ +A+KSG + DG + PS NI + R G GV IG EMSG
Sbjct: 286 IRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDG----HGGVVIGSEMSGD 341
Query: 97 IFNVTVD-------------HLDTDKGRGGNIENIIIRNIKM-ERVKIPIKISRGSNGHP 142
+ NV + + T+ RGG +E + R+ + E I++ N H
Sbjct: 342 VRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEVADAVIRV----NFHY 397
Query: 143 DEGRDPKAIPKIRGISFVNVFSV 165
+EG P +RG+ NV SV
Sbjct: 398 EEGDTGDFTPTVRGLHIENVHSV 420
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + +++ NSP T++P+ C + +PNTDGIDP+ C I+
Sbjct: 141 ITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDV 200
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + ++ NI + GV +G EMSG I NVT+ +
Sbjct: 201 GDDCIAIKSGTEETKERVS--CENITISNCQ-MLHGHGGVVLGSEMSGDIRNVTISNCIF 257
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDE--GRDPKA 150
DTD +GRGG IE+I + N+ M+ V P ++ G G ++P
Sbjct: 258 QDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 317
Query: 151 I----PKIRGISFVNVFSVNTTKA 170
I P+ R I FVN+ + N A
Sbjct: 318 ISEETPQFRRIHFVNISARNVHAA 341
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 23/87 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ELM S +I I SNL NSP +HPVY +PNTDGI+PD
Sbjct: 188 IELMYSADIQI-SNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNT 246
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAM 65
CYI SG+ VAVKSGWD GIA
Sbjct: 247 RIEDCYIVSGDDCVAVKSGWDEYGIAY 273
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + +++ NSP T++P+ C + +PNTDGIDP+ C I+
Sbjct: 141 ITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCLIDV 200
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + ++ NI + GV +G EMSG I NVT+ +
Sbjct: 201 GDDCIAIKSGTEETKERVS--CENITISNCQ-MLHGHGGVVLGSEMSGDIRNVTISNCIF 257
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDE--GRDPKA 150
DTD +GRGG IE+I + N+ M+ V P ++ G G ++P
Sbjct: 258 QDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 317
Query: 151 I----PKIRGISFVNVFSVNTTKA 170
I P+ R I FVN+ + N A
Sbjct: 318 ISEETPQFRRIHFVNISARNVHAA 341
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP T+HP+ C A N DG+D +C ++
Sbjct: 460 VLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLESCRNGLLENCTFDT 519
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D +G P+ N +R G IG EMSG + N+ V +
Sbjct: 520 GDDGITIKSGRDEEGRKRGVPTENFIIRDCR-VYQAHGGFVIGSEMSGGVRNMYVSNCQF 578
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
T +GRGG +ENI + NI M ++
Sbjct: 579 MGTDVGLRFKTARGRGGVVENIYVNNISMTQI 610
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 34/157 (21%)
Query: 12 ISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIESGN 49
+ + +SPF T+HP+Y APNTDGID DC++ G+
Sbjct: 177 VEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGD 236
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG---RIFNVTVDHLD 106
+ +KSG DGI A+P+ N+ +R + G+ IG E + I V D
Sbjct: 237 DGICIKSGSGPDGIRCAKPTVNVEIRNCT-VRNAHGGIVIGSETAAGMSHIHAVGCDLSG 295
Query: 107 TD--------KGRGGNIENIIIRNIKMERVKIPIKIS 135
TD +GRGG+I +I +R++ M PI ++
Sbjct: 296 TDRGIRIKSRRGRGGDIFDIELRDMVMNNTLCPIAMN 332
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I ++ N+PF +HP+ S PN DG DP+ C +G+
Sbjct: 230 VLIKDITIINAPFWVVHPIKSNNVVVDGITVDSHGPNNDGCDPEYAKNVWIKNCVFNTGD 289
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + DG + PS NI V GV +G E+S + NV V +
Sbjct: 290 DCIAIKSGRNEDGRRVNIPSENIVVEDCK-MIDGHGGVVMGSEISAGVRNVFVQNCQMDS 348
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVK 129
+ T+ RGG +EN+ +RNI + +VK
Sbjct: 349 PNLDRAIRIKTNTKRGGFVENVYVRNINVGQVK 381
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGN 49
+S+ NSPF T+H VY + A NTD +D D C ++ G+
Sbjct: 172 LSDFTLENSPFWTLHMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGD 231
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
V +KSG DGI + +P+ N+ V + G+ IG E + I +V V +
Sbjct: 232 DGVTLKSGSGEDGIRVNKPTKNVKVSDCR-ILASHGGIAIGSETAAGISDVEVSNCTFDG 290
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR---------GSNGHPDEGRDP- 148
L + + RGG IENI + +KM+ PI + + DEG P
Sbjct: 291 TRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPISLEQYFAPGVLPEEEATVLDEGPQPV 350
Query: 149 -KAIPKIRGISFVNVFSVN 166
+ P IR IS N+ + N
Sbjct: 351 DETTPHIRNISIKNIKATN 369
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVY-----------CSIAPNTDGIDP---------DCYIESGN 49
++I ++ SP +HPV S PN DG DP D ++G+
Sbjct: 616 ILIEGVSIIRSPMWELHPVLSQNITVRNVKITSHGPNNDGFDPESCRDILVEDTLFDTGD 675
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV-----DH 104
+A+KSG + DG + P+ N+ +RR GV +G E +G I N+ V D
Sbjct: 676 DCIAIKSGRNGDGRRVNVPTENMVIRRCV-MKDGHGGVVLGSECTGGIRNIFVEDCEMDS 734
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERV 128
D D+G RGG +EN+ +RN+K+ RV
Sbjct: 735 PDLDRGLRFKNNAVRGGVLENVFMRNVKIGRV 766
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
+ + ++ SP TI+P+ CS A PNTDGIDP+ C+I+
Sbjct: 140 ITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KTAYPIDERTPAFRRIHFSNITARN 336
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 38/183 (20%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N + I + NSPF +HPV C S PN DG DP+ C ++
Sbjct: 233 NQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRSHGPNNDGCDPESCKNVLIEQCVFDT 292
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + DG + N+ VR G+ +G E+SG N+ ++H
Sbjct: 293 GDDCIALKSGRNEDGRRVGVAVENVVVRHCE-MRDGHGGLVLGSEISGGARNIFMEHCSM 351
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKI 154
T+ RGG IE + +R++ +++ + + + N H +EG + +P +
Sbjct: 352 NSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVV----NFHYEEGEAGEHMPTV 407
Query: 155 RGI 157
R I
Sbjct: 408 RDI 410
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
+ + ++ SP TI+P+ CS A PNTDGIDP+ C+I+
Sbjct: 140 ITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KKAYPIDERTPAFRRIHFSNITARN 336
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
+ + ++ SP TI+P+ CS A PNTDGIDP+ C+I+
Sbjct: 140 ITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KKAYPIDERTPAFRRIHFSNITARN 336
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
+ + ++ SP TI+P+ CS A PNTDGIDP+ C+I+
Sbjct: 140 ITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KTAYPIDERTPAFRRIHFSNITARN 336
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 38/167 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD------ 42
++ S NIL+ ++ NSPF TIH +Y S N DG+DP+
Sbjct: 221 IQFNRSENILL-EGVSVVNSPFWTIH-LYLSKNIRLRNLNVYAHGHNNDGVDPEMSQNVL 278
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C + G+ +A+KSG + +G + PS NI +R + V IG E+SG I N
Sbjct: 279 IENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCT-VKNGHQLVAIGSELSGGIEN 337
Query: 100 VTVDH--------------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
V +DH + T++ GG ++NI NI+ ++ + I
Sbjct: 338 VFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKIDLGI 384
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 106/272 (38%), Gaps = 68/272 (25%)
Query: 12 ISNLAFCNSPFRTIHP-----VYCS--------IAPNTDGIDPDC---------YIESGN 49
+S + NSP T+HP + C+ +PNTDG++P+ + G+
Sbjct: 231 LSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVGD 290
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC------SGVGIGREMSGRIFNVTVD 103
+AVKSG G RR+ C G+ +G EMSG I +VTV
Sbjct: 291 DCIAVKSGKRGTGALKGLAGHLAPTRRLH--VHHCLMERGHGGMVLGSEMSGDITDVTVT 348
Query: 104 -----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ T +GRGG + + ++ M+ V P+ I+ PD GR P
Sbjct: 349 ACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPD-GRSPEVQS 407
Query: 149 -------KAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVKWQCQFVSGFNGQVF 201
+ PKI I+F +V + T P+C V L AP + + F +
Sbjct: 408 RSPAPVDETTPKIHDITFSDVIA---TDVPVCAVAVLGLPEAPVTGVR---LKNFRASLD 461
Query: 202 PLPCPQLQNKSSS---------WCSFLEFSGE 224
P PQ+ + W F E +G+
Sbjct: 462 PSAPPQVPLMADGVEPVAGRALWSDFAEVTGQ 493
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 45/198 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ IS+L SP T+HP+ C + +PNTDGIDP+ C I+
Sbjct: 146 ITISDLNLTMSPSWTVHPMECYDVTIQNISILNPADSPNTDGIDPESCKNLRILNCNIDV 205
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + + + NI + + V +G EMS I NVT+ +
Sbjct: 206 GDDCIAIKSGTEQTTTSKS-ACENITISNCT-MVHGHGAVVLGSEMSRNIRNVTISNCVF 263
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHP----DEGRDP 148
+ T +GRGG +ENI + I ME V P I+ G G D+ P
Sbjct: 264 QQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGPKGKEKYVWDKNPYP 323
Query: 149 --KAIPKIRGISFVNVFS 164
K P R I F N+ +
Sbjct: 324 ITKETPCFRSIHFSNIVA 341
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 58/215 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAG-------TEDTYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 143 DEGRDP-----------KAIPKIRGISFVNVFSVN 166
G++P + P R I F N+ + N
Sbjct: 303 -RGKEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 56/214 (26%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GS 138
SG I N+T+ + L + +GRGG +E+I + NI M+ V P ++ G
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 139 NGHPDEGRDPKAIP------KIRGISFVNVFSVN 166
G + KA P R I F N+ + N
Sbjct: 303 RGKEPYVWEKKAYPIDERTSAFRRIHFSNITARN 336
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 46/209 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD------- 42
+N + I+ + NSP IHP +CS ++PNTDG++P+
Sbjct: 225 FLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEI 284
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C G+ +AVK+G G PSSNI +R+ S + +G EM+ I N+
Sbjct: 285 TGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNL 343
Query: 101 TVDH---LDTD--------KGRGGN--IENIIIRNIKMERVKIPIKISR----GSNGHPD 143
L+TD +GRG + I+ I+ +I+M+ V P I+ +GH +
Sbjct: 344 QARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTPFVINSFYFCDPDGHSE 403
Query: 144 --EGRDPKAI----PKIRGISFVNVFSVN 166
+ ++P A+ P+I+ + F N+ + N
Sbjct: 404 YVQCKEPLAVDERTPQIKELCFRNIQAKN 432
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ + NSP +HPV S PN DGIDP+
Sbjct: 191 VQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 249
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 250 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 309
Query: 100 VTVDH-----------LDTDKGRGGNIENI-IIRNIKM 125
V + L T+ RGG +ENI I N+ M
Sbjct: 310 VVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAM 347
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 35/157 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
+++ NSPF TIHP C + N DG+DP DC + G+
Sbjct: 220 VLMEGFTVTNSPFWTIHPYLCKNVVISRLKVYAHGHNNDGVDPEMSQNVFITDCVFDQGD 279
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV------- 102
+A+KSG + +G + PS NI +R ++ V IG E+SG I NV +
Sbjct: 280 DAIAIKSGRNPEGWRLKTPSKNIVIRNLT-VKNGHQLVAIGSELSGGIENVDISQCQVVD 338
Query: 103 ----DHL---DTDKGRGGNIENIIIRNIKMERVKIPI 132
+HL T++ GG ++NI N+ ++ + +
Sbjct: 339 GAKLNHLLFIKTNERMGGYVKNIYASNLTAGKIDLGV 375
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ ++ NSP +HPV S PN DGIDP+
Sbjct: 191 VQFYRCRNVLV-EDVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 249
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 250 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 309
Query: 100 VTVDH-----------LDTDKGRGGNIENI 118
V + L T+ RGG +ENI
Sbjct: 310 VVARNNVYMNVERALRLKTNSRRGGYMENI 339
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 48/195 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDCYIE---------S 47
L +S L NSP TIHP+ C+ A PNTDG++P+ +
Sbjct: 233 LKMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSV 292
Query: 48 GNGLVAVKSG--WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-- 103
G+ +A+K+G W DG A P+ N++VR GV IG EMSG + +VTV
Sbjct: 293 GDDCIAIKAGKIWP-DGTVPA-PTRNVSVRHCL-MERGHGGVVIGSEMSGSVTDVTVAFC 349
Query: 104 ---------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPD------EGRDP 148
+ T +GRGG + I++ + M+ VK P+ I+ PD + R P
Sbjct: 350 TMRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAP 409
Query: 149 ----KAIPKIRGISF 159
A PKI I F
Sbjct: 410 APVSAATPKIGDIRF 424
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
+E N+ + + N+PF IHP+ S PN DG DP+
Sbjct: 221 IEFFECKNVHL-KDFKIVNAPFWIIHPIKSNHVIVDGIHIESHGPNNDGCDPEYSKNVII 279
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+K+G D DG +A S NI ++ GV IG E+S + NV
Sbjct: 280 RNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCK-MFDGHGGVTIGSEISAGVSNV 338
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVK 129
V++ + ++ RGG IENI +RNI + VK
Sbjct: 339 FVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVK 380
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ ++ NSP +HPV S PN DGIDP+
Sbjct: 191 VQFYRCRNVLV-EDVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 249
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 250 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 309
Query: 100 VTVDH-----------LDTDKGRGGNIENI-----IIRNIKMERVKIPIK 133
V + L T+ RGG +ENI + N+ E ++I ++
Sbjct: 310 VVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLR 359
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 35/151 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGNGL 51
+ + NSPF IHP C + N DG+DP DC + G+
Sbjct: 228 MEGVTIINSPFWVIHPYMCHNVVIRNVKVYAHGHNNDGVDPEMCENVLIEDCVFDQGDDA 287
Query: 52 VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-------- 103
+A+KSG + D + PS NI VR + IG E+SG + NV ++
Sbjct: 288 IAIKSGRNQDAWRLNTPSRNIVVRNCL-VKNGHQLLAIGSELSGGVENVFLENCTVEENA 346
Query: 104 ---HL---DTDKGRGGNIENIIIRNIKMERV 128
HL T++ RGG ++N+ +RN+ +++
Sbjct: 347 RMFHLVFIKTNERRGGYVKNVYVRNVTADKM 377
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 67/150 (44%), Gaps = 33/150 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ + NSP IHPV S PN DGIDP+
Sbjct: 193 VQFYRCRNVLV-EGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 251
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 311
Query: 100 VTVDH-----------LDTDKGRGGNIENI 118
V + L T+ RGG +ENI
Sbjct: 312 VVARNNVYMNVERALRLKTNSRRGGYMENI 341
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 38/165 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGT 80
APNTDGIDP C I++G+ +AVK G G+A P+ N+ V + + G
Sbjct: 257 APNTDGIDPANSRDVLIRRCTIDTGDDNIAVKGG----GVAN-EPTENVTVTDCKFLHG- 310
Query: 81 TPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVK 129
GV IG E + N V + +D+ RGG +EN++ R+I M+ V+
Sbjct: 311 ----HGVSIGSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVE 366
Query: 130 IPIKI-----SRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTK 169
I I + + HP+ K P +R I+F + TT+
Sbjct: 367 TAITIFLFYDDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTR 411
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 83/203 (40%), Gaps = 48/203 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDP---------DCYIESGN 49
+ + +SP T+HP C + +PNTDGI+P DC I+ G+
Sbjct: 148 VEQVKMIDSPSWTVHPNDCDNVTISAVSIVNPANSPNTDGINPESCRNVRISDCSIDVGD 207
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + + P NI + + GV G EMSG I NV V +
Sbjct: 208 DCIAIKSGTEDAERVI--PCENITITNCT-MLHGHGGVVFGSEMSGDIRNVVVSNCIFEG 264
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKA-------- 150
+ +GRGG IENI + NI M + P I H G +P
Sbjct: 265 TDRGIRFKSRRGRGGTIENIRVNNIVMNNIICPF-ILNLYYYHGPRGMEPYVSDKEVQPV 323
Query: 151 ---IPKIRGISFVNVFSVNTTKA 170
PK R I F N+ + + T A
Sbjct: 324 TALTPKFRHIHFSNITATDVTAA 346
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 40/175 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ +N ++ + + + P TIHPVYC + PNTDG +PD
Sbjct: 150 IQFINCKHV-TLEDFTIEDGPQWTIHPVYCEDVVVRGVTVNTKGPNTDGCNPDSCRKVLI 208
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIF 98
C E+G+ +A+ SG + DG + RP I V+ R G + V IG MSG I
Sbjct: 209 EDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIGGH---AAVAIGSGMSGGIC 265
Query: 99 NVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVK---IPIKISRGSN 139
++ + + + +GRGG ++ + + ++M+ ++ I + ++ GS+
Sbjct: 266 DIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMNYGSS 320
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + ++ +SP T++P+ C + +PNTDGIDP+ C+I+
Sbjct: 142 ITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDV 201
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL-- 105
G+ +A+KSG + +A NI + V +G EMSG I NVT+ +
Sbjct: 202 GDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGDIRNVTISNCIF 258
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDP---- 148
DTD+G RGG IE+I + NI M+ V P ++ G G D
Sbjct: 259 QDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 318
Query: 149 --KAIPKIRGISFVNVFSVNTTKA 170
+ P R I F N+ + N A
Sbjct: 319 ITEETPHFRRIHFANISARNVHAA 342
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 38/170 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ + NSP +HPV S PN DGIDP+
Sbjct: 191 VQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 249
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 250 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 309
Query: 100 VTVDH-----------LDTDKGRGGNIENI-----IIRNIKMERVKIPIK 133
V + L T+ RGG +ENI + N+ E ++I ++
Sbjct: 310 VVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLR 359
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 36/156 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I +++ +SP T++P+ C + +PNTDGI+P+ C+I+
Sbjct: 144 VTIRDVSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDV 203
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G + A P NI + + GV IG EMSG I NVT+ +
Sbjct: 204 GDDCIAIKAGTEE--TAERVPCENITITNCT-MIHGHGGVVIGSEMSGNIRNVTISNCVF 260
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
L + +GRGG +E+I + N+ ME V P
Sbjct: 261 QHTDRGIRLKSRRGRGGIVEDIRVSNLVMENVICPF 296
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + ++ +SP T++P+ C + +PNTDGIDP+ C+I+
Sbjct: 142 ITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDV 201
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + +A NI + V +G EMSG I NVT+ +
Sbjct: 202 GDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGDIRNVTISNCIF 258
Query: 105 LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDP---- 148
DTD+G RGG IE+I + NI M+ V P ++ G G D
Sbjct: 259 QDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 318
Query: 149 --KAIPKIRGISFVNVFSVNTTKA 170
+ P R I F N+ + N A
Sbjct: 319 ITEETPHFRRIHFANISARNVHAA 342
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + ++ +SP T++P+ C + +PNTDGIDP+ C+I+
Sbjct: 142 ITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDV 201
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL-- 105
G+ +A+KSG + +A NI + V +G EMSG I NVT+ +
Sbjct: 202 GDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGDIRNVTISNCIF 258
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDP---- 148
DTD+G RGG IE+I + NI M+ V P ++ G G D
Sbjct: 259 QDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 318
Query: 149 --KAIPKIRGISFVNVFSVNTTKA 170
+ P R I F N+ + N A
Sbjct: 319 ITEETPHFRRIHFANISARNVHAA 342
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + ++ +SP T++P+ C + +PNTDGIDP+ C+I+
Sbjct: 142 ITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPESCKNVRISNCHIDV 201
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL-- 105
G+ +A+KSG + +A NI + V +G EMSG I NVT+ +
Sbjct: 202 GDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGDIRNVTISNCIF 258
Query: 106 -DTDKG--------RGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDP---- 148
DTD+G RGG IE+I + NI M+ V P ++ G G D
Sbjct: 259 QDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGKEKYVWDKNPYP 318
Query: 149 --KAIPKIRGISFVNVFSVNTTKA 170
+ P R I F N+ + N A
Sbjct: 319 ITEETPHFRRIHFANISARNVHAA 342
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 38/170 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ N+L+ + NSP +HPV S PN DGIDP+
Sbjct: 193 VQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 251
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGREMSGRIFN 99
C ++G+ V +KSG D DG + PS I VR + + + G+ IG EMSG + N
Sbjct: 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRN 311
Query: 100 VTVDH-----------LDTDKGRGGNIENI-----IIRNIKMERVKIPIK 133
V + L T+ RGG +ENI + N+ E ++I ++
Sbjct: 312 VVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLR 361
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 54 VKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKGRGG 113
+KSGWD GI+ R SS+I +R VSG++P G+ E SGR+ NV G
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSPFIGIAGV-SETSGRVDNVN--------DMGI 51
Query: 114 NIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAPIC 173
+ + I K I+IS HPD+ D A+P ++ + N+ IC
Sbjct: 52 EYKCVYIYG----ECKEGIQISGDVGDHPDDKCDLNALPIVKAGLIQGM--KNSPFTDIC 105
Query: 174 MKNVSLLVL------APSVKWQCQFVSGFNGQVFPLPCPQL 208
+ +++L + PS K C V G QV P PCP+L
Sbjct: 106 LSDINLHEVNGTRSRTPSCK--CSDVFGVALQVSPWPCPEL 144
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
++L+ S ++ +I L NS T++P+ C +PNTDGI+P+
Sbjct: 169 IKLVRSKHV-VIEGLHLINSASWTVNPLLCEFVRIDGITIENPVPSPNTDGINPESCRNV 227
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I+ G+ V +KSG D G + RP NI + V IG EMSG +
Sbjct: 228 QILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCV-MLKGHGAVTIGSEMSGGVR 286
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR---GSNGHPDE 144
NV V + + + +GRGG +E ++ N+ M+ V ++ G++ D
Sbjct: 287 NVVVSNCVFQGTDVGIRVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPGDL 346
Query: 145 GRDPKAIPKIRGISFVNVFSVNTTKA 170
+ P++R F N+ + + A
Sbjct: 347 FPVGEGTPRLRDFRFSNITARGSKTA 372
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 23/111 (20%)
Query: 12 ISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIESGN 49
++N + N+PF +HPVY PNTDG+DP+ C I +G+
Sbjct: 201 LANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVISAGD 260
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
VA+K+G D DG + S NI VRR + +G+ +G E+SG + NV
Sbjct: 261 DAVALKTGRDADGWRVGVASENIVVRR-NVLASRFNGICVGSEVSGGVDNV 310
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVY-----------CSIAPNTDGIDPD---------CYIESGN 49
++I ++ NSP IHPV S N DG +P+ C ++G+
Sbjct: 231 VLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVSHGSNNDGCNPESSKDVLIENCVFDTGD 290
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG ++DG + PS NI VR GV IG E+SG + NV V++
Sbjct: 291 DCIAIKSGRNNDGRRVNVPSENIIVRNCK-MKDGHGGVVIGSEISGGVRNVFVENCEMSS 349
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVK 129
+ T+ RGG IEN+ +R++++ VK
Sbjct: 350 PNLDRALRIKTNSIRGGLIENVFVRDVEVGVVK 382
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 44/192 (22%)
Query: 19 NSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIESGNGLVAVKS 56
NSP T+HPV+ S +PNTDGIDP+ G+ +A+KS
Sbjct: 240 NSPSWTLHPVFSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKS 299
Query: 57 GWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------L 105
G G + PS NI + GV IG EMSG I NV + + +
Sbjct: 300 GKGKIGREIGIPSENINIENCH-MEFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRGLRI 358
Query: 106 DTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNG------HPDEGRDPKAIPKIR 155
T +GRGG I+ I NI M++V P I+ S+G + D+ + P I+
Sbjct: 359 KTRRGRGGIIDGIHAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIK 418
Query: 156 GISFVNVFSVNT 167
I+F N+ N+
Sbjct: 419 NITFKNMVCKNS 430
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
+++ +++ SPF T+HP+ C + N DG+DP DC + G+
Sbjct: 224 VLVEDISIRGSPFWTLHPLLCRDVTIRRVSIQAHGHNNDGVDPEMSQNVLIEDCVFDQGD 283
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIFNVTVD--HL 105
V+VKSG D D +A P N+ VR RV + +G E+SG I N+ VD H
Sbjct: 284 DAVSVKSGRDMDAWRLATPCRNVVVRNCRVLNGHQL---MAVGSELSGGIENIWVDDCHF 340
Query: 106 DTDKGRGGNIENIIIRNI 123
D GRGG+ + I N+
Sbjct: 341 VGD-GRGGDDHAVPINNL 357
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C A N DG+D DC +
Sbjct: 225 ILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLESCRNGLVDDCTFDV 284
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G P+ NI VR S G IG EMSG + N+ V +
Sbjct: 285 GDDGICIKSGRDEQGRKRGVPTENITVRN-SRVYHAHGGFVIGSEMSGGVKNLYVSNCTF 343
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
T +GRGG +ENI + I M +
Sbjct: 344 MGTDVGLRFKTARGRGGVVENIFVDGIDMTDI 375
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 74/161 (45%), Gaps = 46/161 (28%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIES 47
++I + NSP TI+PV C +PNTDGIDPD CYI+
Sbjct: 146 ILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPPDSPNTDGIDPDSSRNVYITNCYIDV 205
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAV-----RRVSGTTPTCSGVGIGREMSGRIFNVTV 102
G+ +A+K+G + D + P NI + R G GV IG E SG I V +
Sbjct: 206 GDDCIAIKAGRE-DSLYRT-PCENIVIANCLMRHGHG------GVVIGSETSGGIRKVVI 257
Query: 103 DHL---DTDKG--------RGGNIENIIIRNIKMERVKIPI 132
+ DTD+G RGG +E++ NI ME+V P
Sbjct: 258 TNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPF 298
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + F NSP +HP+ C S A N DG+D +
Sbjct: 230 VSLIECKNVWF-QGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLDLESCKNA 288
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG ARP N+ V + G +G EMSG +
Sbjct: 289 LIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 347
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI IRN+ M
Sbjct: 348 NVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSM 385
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 35/159 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPD---------C 43
N + +++ +A NSPF IHP S N DG+DP+ C
Sbjct: 210 FNRSKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFAHGHNNDGVDPEMSQNVLIENC 269
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV--- 100
+ G+ +AVK+G + D + P NI +R S + IG E+SG + NV
Sbjct: 270 VFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCS-VKNGHQLLAIGSELSGGVENVYMG 328
Query: 101 --------TVDHL---DTDKGRGGNIENIIIRNIKMERV 128
++HL T++ RGG ++NI + +IK R+
Sbjct: 329 NCEVAPNAKLNHLLFIKTNERRGGYVKNIYMEDIKAGRI 367
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF I+PV S PN+DG +P+ C ++G+
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYGPNSDGCNPESCNRVLIENCLFDTGD 302
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 303 DCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIFARRCRMSS 361
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IEN+ IR+I++ V+ I I N +EG +P+++
Sbjct: 362 PNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEEGDAGNFMPQVKN 417
Query: 157 ISFVNVFSVNTTKA 170
+ N+ +A
Sbjct: 418 LHISNLTVQKAQRA 431
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+N N+L+ ++ F NSP IHP+ C S A N D +D +
Sbjct: 234 VSLVNCKNVLL-KDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGDALDLESCKNV 292
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
++G+ + +KSG D G RP N+ V + G +G EMSG +
Sbjct: 293 LVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCT-VFAGHGGFVVGSEMSGGVR 351
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVK 129
N+ V L TD +GRGG +ENI I +I M +K
Sbjct: 352 NILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIK 393
>gi|326501180|dbj|BAJ98821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 132
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 85 SGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIK 133
+G+ IG EMSG + N+TV++ + T GRGG I NI NI + V+ I
Sbjct: 11 AGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIV 70
Query: 134 ISRGSNGHPDEGRDPKAIPKIRGISF 159
I N H D+G D A P I GISF
Sbjct: 71 IKVDYNEHADDGYDRNAFPDITGISF 96
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECKNVWL-EGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCRNA 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG ARP N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI +RN+ M
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSM 386
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 37/202 (18%)
Query: 10 LIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDPDCY-------IESGNGL 51
+ + + NSPF IH + Y + N DGIDP+ IE NG
Sbjct: 212 ITLEGVFITNSPFWCIHLLKSENIICRGLRYDAKLVNNDGIDPEFTRNLLIENIEFNNGD 271
Query: 52 --VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
VA+K G D+DG ARPS NI +R GV +G EMS + NV ++
Sbjct: 272 DNVAIKCGRDNDGWTTARPSENIIIRNCK--FKGLHGVVLGSEMSAGVQNVFIENCTYGG 329
Query: 104 ------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGI 157
++ T+ RGG I NI + N + V+ + ++ + EG D ++ I
Sbjct: 330 YCKRGIYIKTNPDRGGFIRNIYVNNCRFGEVE---DLFYATSMYAGEGMDNTHFTEVHDI 386
Query: 158 SFVNVFSVNTTKAPICMKNVSL 179
+V + A + ++ ++
Sbjct: 387 YVKDVTCQKASAAALVLQGTTV 408
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 46/166 (27%)
Query: 2 ELMNSNNI--LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---- 42
+LM+ +N + + ++ SP TI+P+ CS A PNTDGIDP+
Sbjct: 130 KLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKN 189
Query: 43 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREM 93
C+I+ G+ +A+K+G + IA ++ T T GV +G EM
Sbjct: 190 VRISNCHIDVGDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEM 242
Query: 94 SGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
SG I N+T+ + L + +GRGG +E+I + NI M+ V
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNV 288
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHP------------VYCSIAPNTDGIDPD------ 42
++ S N+L+ ++ NSPF TIH VY N DG+DP+
Sbjct: 211 IQFNRSENVLL-EGISITNSPFWTIHTYLSKNIIIRNLNVYAH-GHNNDGVDPEMSQNVL 268
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C + G+ +A+KSG + +G + PS NI +R + + IG E+SG I N
Sbjct: 269 IENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCT-VKNGHQLIAIGSELSGGIEN 327
Query: 100 VTVD-----------HL---DTDKGRGGNIENIIIRNIKMERVKIPI 132
V VD HL T++ GG + NI N++ R+++ I
Sbjct: 328 VFVDSCVVMDGAKLNHLLFIKTNERMGGYVRNIYASNLQAGRIELGI 374
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I F SPF +HP+ S N DG DP+ C +G+
Sbjct: 219 VLIEGPTFNRSPFWILHPLLSKNVIVRDVNLDSHGRNNDGCDPESCENVLIERCRFNTGD 278
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDK 109
+A+KSG D DG PS NI +R +GVGIG E++G NV V++ D
Sbjct: 279 DCIAIKSGKDEDGRVWNIPSKNIIIRNCE-MKDGHAGVGIGSEITGGCENVWVENCKMDS 337
Query: 110 -------------GRGGNIENIIIRNIKM 125
RGG ++N+ +RN+++
Sbjct: 338 PNLTRVIRIKSNPERGGEVKNLYVRNVEV 366
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
+ L NIL+ SPF IHP+ S N DG DP+
Sbjct: 210 INLYKCKNILL-EGFTLHRSPFWLIHPLLSENITVRKVILQSHGRNNDGCDPESCKNVLI 268
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+KSG D DG PS NI VR +GV IG E++G NV
Sbjct: 269 DSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCL-MKDGHAGVAIGSEITGGCQNV 327
Query: 101 TVDH-------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
V++ + ++ RGG ++NI +R+I + K I + H ++G
Sbjct: 328 WVENCRMDSPELDRIIRIKSNSERGGEVKNIFVRDITVGECKESILGIELNYWHVEDGPY 387
Query: 148 PKAIPKIRGISFVNVFS 164
P P I N+ S
Sbjct: 388 P---PYFHNIHLENITS 401
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 34/154 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---------YIESGN 49
+ + NSPF TIH VYC+ A NTD +D D + G+
Sbjct: 171 LKGITVQNSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGD 230
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+ +KSG DG+ + +P++++ V+ + + G+ IG E +G I +V V+
Sbjct: 231 DAITLKSGSGPDGLRVNKPTAHVNVKDCT-ILASHGGIAIGSETAGGINDVNVEKCTFSG 289
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVKIPI 132
L + +GRGG I+ I +R+++M+ PI
Sbjct: 290 TQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPI 323
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 104 HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVF 163
+ T GRGG ++I ++ + M +K ++ H D+ DP A+P+I+GI++ ++
Sbjct: 23 RIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSHADKNYDPNALPEIKGINYRDMV 82
Query: 164 SVNTTKA------------PICMKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLPCPQLQ 209
+ T A IC+ NV++ + A S K W C V G V P PC L
Sbjct: 83 ADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQPWTCSDVEGITSGVTPKPCNLLP 142
Query: 210 N----KSSSWCSF 218
+ K ++ C F
Sbjct: 143 DQGPEKITTTCEF 155
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 42/218 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----------CYIE 46
+ + + NSP IHP + +PNTDG+DP+ C+
Sbjct: 235 VTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCF-S 293
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
G+ +AVKSG + G PS NI++RR S V IG EM+G + ++TV
Sbjct: 294 VGDDCIAVKSGKIYMGSTYKCPSKNISIRRCCMRDGHGS-VTIGSEMAGGVKDLTVKDCM 352
Query: 104 --HLD------TDKGRGGN--IENIIIRNIKMERVKIPIKIS----RGSNGHPDEGRDPK 149
H D T +GRG + ++ I+ +I+M+ V P I+ +GH + R +
Sbjct: 353 FLHTDRGLRIKTRRGRGKDAVVDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKE 412
Query: 150 AIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVK 187
A+P F+ +A C + + P +
Sbjct: 413 ALPVDDKTPFIKSLCFRDIEAENCHVAAAYMYGLPEQR 450
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 40/179 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDP-------- 41
++ +S NI+I + NSP I+PV PN DG+DP
Sbjct: 216 IQPYHSKNIMI-KGVTILNSPMWQINPVLSENILIDDVKIIGHGPNNDGVDPESSKNVLI 274
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D Y ++G+ +A+KSG + DG + PS NI + + GV IG E+SG + NV
Sbjct: 275 KDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEG-NEMKDGHGGVVIGSEISGSVRNV 333
Query: 101 TVDH-------------LDTDKGRGGNIENI-----IIRNIKMERVKIPIKISRGSNGH 141
H + T+ RGG IE+I ++++ E ++I + G G+
Sbjct: 334 FAQHNVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTGN 392
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 2 ELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD-------- 42
E S N+LI + F N+PF +HP+ C S PN DG +P+
Sbjct: 219 EPFESENVLI-KGVTFINAPFWVMHPIKCTNVTVDGVKVISHGPNNDGCNPEYSKNVHIT 277
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C ++G+ +A+KSG + +G + S NI V GV +G E+S + NV
Sbjct: 278 NCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCI-MKDGHGGVVMGSEISAGVRNVY 336
Query: 102 VDH-------------LDTDKGRGGNIENIIIRNIKMERVKIP-IKISRGSNGHPDEGRD 147
V + + T+ RGG +EN+ +++I++ +VK +KI+ + + ++
Sbjct: 337 VRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIY--DNQE 394
Query: 148 PKAIPKIRGISFVNV 162
+ IP I+ I NV
Sbjct: 395 GEHIPTIKNIHIENV 409
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 44/159 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I ++ NSP TI+P+ C + +PNTDGI+P+ C I+
Sbjct: 195 VTIKDIMLKNSPSWTINPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDV 254
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I NVT+
Sbjct: 255 GDDCIAIKAGTEDT-------QERIACENITITNCTMVHGHGGVVLGSEMSGDIRNVTIS 307
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ L + +GRGG IE+I + NI ME V P
Sbjct: 308 NCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICP 346
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 36/161 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIES 47
+++ + NSP T+HPV + +PNTDGIDP+
Sbjct: 230 VVVEGITIKNSPSWTVHPVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSL 289
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +A+KSG + M RPS NI +R GV +G EMSG I +V V+
Sbjct: 290 GDDCIAIKSGKISVPVDMRRPSENIIIRNCL-MEYGHGGVVLGSEMSGGIKHVYVERCFF 348
Query: 104 -------HLDTDKGRGGN--IENIIIRNIKMERVKIPIKIS 135
+ T +GRG I+ I I+NIKM+ V P ++
Sbjct: 349 RNTDRGLRIKTRRGRGNTAVIDEIYIKNIKMDGVLTPFTLN 389
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 35/156 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+ L NIL+ +PF IHP+ S N DG DP
Sbjct: 212 INLYKCKNILL-EGFTINRAPFWLIHPLLSENVTIRKVKMQSHGYNNDGCDPESCNNVLI 270
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++G NV
Sbjct: 271 EDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGGCRNV 329
Query: 101 TVDHLDTDKG-------------RGGNIENIIIRNI 123
V++ D RGG +EN+ +RNI
Sbjct: 330 WVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNI 365
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF I+PV S PN+DG +P+ C ++G+
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYGPNSDGCNPESCNRVLIENCLFDTGD 302
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 303 DCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIFARRCRMSS 361
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IEN+ IR+I++ V+ I I N +EG +P++
Sbjct: 362 PNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEEGDAGNFMPQVNN 417
Query: 157 ISFVNVFSVNTTKA 170
+ N+ +A
Sbjct: 418 LHISNLTVQKAQRA 431
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF I+PV S PN+DG +P+ C ++G+
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYGPNSDGCNPESCNRVLIENCLFDTGD 302
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 303 DCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIFARRCRMSS 361
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
+ T+ RGG IEN+ IR+I++ V+ I I N +EG +P++
Sbjct: 362 PNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEEGDAGNFMPQVNN 417
Query: 157 ISFVNVFSVNTTKA 170
+ N+ +A
Sbjct: 418 LHISNLTVQKAQRA 431
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 46/196 (23%)
Query: 12 ISNLAFCNSPFRTIHP------VYCSI-------APNTDGIDPD---------CYIESGN 49
+ L F +SP IHP ++C++ +PNTDG+DP+ G+
Sbjct: 236 VQGLYFHDSPAWVIHPYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGD 295
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----H 104
+AVKSG + G PSSNI V + V +G EM+G + N+ V+ H
Sbjct: 296 DCIAVKSGKIYMGRRYKTPSSNIHVYQCL-MEHGHGAVTVGSEMAGGVNNLIVEKCRFYH 354
Query: 105 LD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPD------EGRDPKA 150
D T +GRG + ++NII R++ ME+V P + PD + R+P
Sbjct: 355 TDRGLRIKTRRGRGKDAILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYP 414
Query: 151 I----PKIRGISFVNV 162
+ P ++ F N+
Sbjct: 415 VDDGTPSMKRFCFENI 430
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 49/201 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
+++ + F NSP TIHP+ C N D +D + C ++
Sbjct: 460 VLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLESCRNGLVEGCSFDT 519
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D +G P+ NI VR + G IG EMSG + N+ V
Sbjct: 520 GDDGICIKSGRDAEGRKRGVPTENIIVRNCT-VFHGHGGFVIGSEMSGGVRNLFVSDCNF 578
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERV-------------KIPIKISRGSNGHPD 143
T +GRGG +ENI + +I M + K P+ ++ N P+
Sbjct: 579 LGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKDPVSLNGEKNVLPE 638
Query: 144 EGRDP--KAIPKIRGISFVNV 162
+P + P+ R N+
Sbjct: 639 MKAEPLGEGTPQFRNFHIKNI 659
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
++ N+LI + NSP IHPV C S PN DG +P
Sbjct: 224 IQFYRCRNVLI-EGVTIVNSPMWEIHPVLCENVTVRGVTVRSHGPNNDGCNPESCRYVLI 282
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC ++G+ +A+KSG + DG + PS+ I +R GV IG E+SG ++
Sbjct: 283 EDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCK-MRDGHGGVVIGSEISGGAHHI 341
Query: 101 TVD-------------HLDTDKGRGGNIENIIIRNIKMERV-KIPIKISRGSNGHPDEGR 146
+ + T+ RGG IE+I +R +++ +V I++ N + +EG
Sbjct: 342 YAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRV----NFYYEEGD 397
Query: 147 DPKAIPKIRGISFVNVFSVNTTKA 170
P +R I N+ S + A
Sbjct: 398 AGPFDPIVRHIEVRNLTSRQSPYA 421
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 24 TIHPVYC-----------SIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGI 63
+IHP C S N DGID D C I SG+ +++KSG +
Sbjct: 200 SIHPTCCDNLVFRNLTVRSTLTNGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAY 259
Query: 64 AMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------------HLDTDKGR 111
+ARP+ ++ + + + +GIG E S I V ++ ++ + GR
Sbjct: 260 QLARPTEDVRIVNCTLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGR 319
Query: 112 GGNIENIIIRNIKMERVKIP-IKISRGSNGHPDEGRDP--KAIPKIRGISFVNVFSVNTT 168
G IE++ +R++ ++++ +KIS+ S G DE P +P R ISF+ ++
Sbjct: 320 GAFIEDLTVRDMSAAKMRMGFLKISQTSAGVQDENPVPGLDGLPLFRNISFLR---IHVD 376
Query: 169 KAPICMK 175
AP+ ++
Sbjct: 377 DAPVLVE 383
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 56/205 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDC---------YIES 47
+ + ++ SP TI+P+ CS A PNTDGIDP+ +I+
Sbjct: 140 ITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDV 199
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I N+T+
Sbjct: 200 GDDCIAIKAGTED-------TYERIACENITITNCTMVHGHGGVVLGSEMSGSIRNITIS 252
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP---- 148
+ L + +GRGG +E+I + NI M+ V P ++ P G++P
Sbjct: 253 NCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RGKEPYVWE 311
Query: 149 -------KAIPKIRGISFVNVFSVN 166
+ P R I F N+ + N
Sbjct: 312 KTAYPIDERTPAFRRIHFSNITARN 336
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 38/185 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + NSPF I+PV C S PN+DG DP+ C ++G+
Sbjct: 235 VLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVSFGPNSDGCDPESCQRVLIENCLFDTGD 294
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG----------RIFN 99
+A+KSG + +G +A P + ++ + GV IG E+SG R+ +
Sbjct: 295 DCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGH-GGVVIGSEISGGAKQIFARRCRMSS 353
Query: 100 VTVD---HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
++ + T+ RGG IE I + +I++ VK I I N + +EG +P+++
Sbjct: 354 PNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVI----NFYYEEGDAGNFLPEVKD 409
Query: 157 ISFVN 161
+ N
Sbjct: 410 LKISN 414
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 126 ERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTT---------KAP---IC 173
E +K ++ HPD +P A+P + IS+ N+ + N + KAP IC
Sbjct: 1 ENMKWAFTMTGSYGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDIC 60
Query: 174 MKNVSLLVLAPSVK--WQCQFVSGFNGQVFPLPCPQLQNKSSSWCSF 218
+ NV++ + A + K W C ++ G + V+P PC L+ K + +F
Sbjct: 61 LSNVTITMAAKAKKYPWNCTYIHGLSNTVYPQPCSLLEEKPAEGDAF 107
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
+ I + NSP T++P+ C +PNTDGI+P+ CYI+
Sbjct: 141 VTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNPYDSPNTDGINPESCEGVRISNCYIDV 200
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ V +KSG + + + P NIA+ G+ IG EMSG + NV + +
Sbjct: 201 GDDCVTLKSGTEDCKVRI--PCENIAITNCI-MAHGHGGIVIGSEMSGGVRNVVISNCIF 257
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 258 EGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICP 292
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 37/149 (24%)
Query: 10 LIISNLAFCNSPFRTIHP------------VYCSIAPNTDGIDPD---------CYIESG 48
+++ + NSPF TIHP VY N DG+DP+ C + G
Sbjct: 219 ILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYAH-GHNNDGVDPEMSQNVLIENCIFDQG 277
Query: 49 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD----- 103
+ +A+KSG + D + S NI +R + V IG E+SG I NV +D
Sbjct: 278 DDAIAIKSGSNQDAWRLNTSSKNIVMRNCT-VKNGHQLVAIGSELSGGIENVFIDNCTVV 336
Query: 104 ------HL---DTDKGRGGNIENIIIRNI 123
HL T++ RGG + NI + NI
Sbjct: 337 DGAKLNHLLFIKTNERRGGYVSNIYMSNI 365
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 24 TIHPVYC--------SIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMA 66
+IHP YC ++ DGID D C ++ + +++KSG +G +
Sbjct: 207 SIHPTYCENITFKNVTVHSGADGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTIL 266
Query: 67 RPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------------LDTDKGRGGN 114
RP+ ++ + + + +GIG E SG I NV V+H + + GRG
Sbjct: 267 RPTEDVQISNCTFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAF 326
Query: 115 IENIIIRNIKMERVKIP-IKISRGSNGHPDEGRDP--KAIPKIRGISFVNVFSVNTTKAP 171
IE+I + ++++ K ++ + +G DE P + IP IR F N + T P
Sbjct: 327 IEDISMNDLEVSGAKQGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSN---IRVTDMP 383
Query: 172 ICMKNVSLLVLAPSVKWQCQFVSGFNGQVFPL 203
+ + V + P + V+G G+ L
Sbjct: 384 VLVDGVGIHPSKPLEGFSLTNVTGTCGKGISL 415
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP IHP+ C A N DG+D + +
Sbjct: 240 VLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLESCKNSIIVNSIFDV 299
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG RP+ N+ + G +G EMSG + N+ V +
Sbjct: 300 GDDAICIKSGKDEDGRRRNRPTENVLIDNCK-VFQGHGGFVVGSEMSGSVRNILVSNCQF 358
Query: 105 LDTD--------KGRGGNIENIIIRNIKM 125
L TD +GRGG +ENI IR+I M
Sbjct: 359 LGTDVGLRFKSCRGRGGVVENIYIRDINM 387
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDP-------- 41
++L S NI + + NSPF IH + Y + N DGIDP
Sbjct: 208 IQLYQSKNI-TLEGVKIINSPFWCIHLLKSENIICRRLRYDAKLVNNDGIDPEMSRNILI 266
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
D + +G+ VA+KSG D+DG A P+ NI +R V IG EMS + NV
Sbjct: 267 EDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCH--FKGLHAVVIGSEMSAGVRNV 324
Query: 101 TVDHLD------------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
V++ D T+ RGG + ++ + N K + V+ ++ G EG++
Sbjct: 325 FVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAG---EGQES 381
Query: 149 KAIPKIRGISFVNVFSVNTTKA 170
I + +V+ S +A
Sbjct: 382 MHFSTIEHL-YVDGLSARKVRA 402
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP IHP+ C + N D +D +C+ ++
Sbjct: 250 ILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ ++ + G IG EMSG + NV V
Sbjct: 310 GDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSF 368
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ +GRGG +ENI I NI M + IP
Sbjct: 369 VGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP IHP+ C + N D +D +C+ ++
Sbjct: 250 ILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ ++ + G IG EMSG + NV V
Sbjct: 310 GDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSF 368
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ +GRGG +ENI I NI M + IP
Sbjct: 369 VGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 34/158 (21%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGN 49
+ ++ NSPF T H VY + A NTD +D D C + G+
Sbjct: 194 LEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLDSSEDIVIEHCLFDVGD 253
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
V +KSG DG+ + P+ + V + G+ IG E +G I +VTV+
Sbjct: 254 DAVTLKSGSGADGLRINLPTRGVTVSHCK-ILASHGGIAIGSETAGGIEDVTVNDCVFEG 312
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR 136
L + +GRGG I+NI + N+ M PI I +
Sbjct: 313 TQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQ 350
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 34/149 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP IHP+ C + N D +D +C+ ++
Sbjct: 250 ILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ ++ + G IG EMSG + NV V
Sbjct: 310 GDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSF 368
Query: 104 -------HLDTDKGRGGNIENIIIRNIKM 125
+ +GRGG +ENI I NI M
Sbjct: 369 VGTDVGLRFKSTRGRGGVVENIFIDNINM 397
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 34/155 (21%)
Query: 8 NILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIES 47
N + IS + SPF IHP+ C + PN DG DP+ +
Sbjct: 220 NRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEGCENVLIQNTLFHT 279
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +A+KSG ++DG +PS NI +R GV IG E+SG N+ +
Sbjct: 280 GDDCIAIKSGRNNDGRFWNQPSKNIIIRNCV-MEDGHGGVVIGSEISGGCQNIYAEDCEM 338
Query: 104 ---------HLDTDKGRGGNIENIIIRNIKMERVK 129
+ T+ RGG IENI +R +K+ + K
Sbjct: 339 DSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCK 373
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ C SPF TIH C + N DGID DC + G+
Sbjct: 219 VLLDGFKICESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 278
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 279 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 334
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N+K
Sbjct: 335 APNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 36/156 (23%)
Query: 15 LAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGNGLV 52
+ F NSP T+HP + S +PNTDG+DP+ G+ +
Sbjct: 239 VTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCI 298
Query: 53 AVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LDTD- 108
AVKSG + G PS NI +R+ V +G EM+G + N+ V+ DTD
Sbjct: 299 AVKSGKIYMGKKYRTPSENIHIRQCLMENGH-GAVTVGSEMAGGVKNLVVEECRFYDTDR 357
Query: 109 -------KGRGGN--IENIIIRNIKMERVKIPIKIS 135
+GRG + ++ II R I M++V P I+
Sbjct: 358 GLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVIN 393
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 40/159 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++IS+L + P T+HPV C S+ NTDG+DP+ C + +
Sbjct: 136 VLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLHNTDGVDPEASRLVHITGCRFNTND 195
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
VAVK+G D DG + PS +I V+ + G+ +G EMSG + V +
Sbjct: 196 DCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSEMSGGVRRVFAEDCRINP 254
Query: 104 -------------HLDTDKGRGGNIENIIIRNIKMERVK 129
+L K RGG ++ + +R + V+
Sbjct: 255 PDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVE 293
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 36/156 (23%)
Query: 15 LAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGNGLV 52
+ F NSP T+HP + S +PNTDG+DP+ G+ +
Sbjct: 239 VTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCI 298
Query: 53 AVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LDTD- 108
AVKSG + G PS NI +R+ V +G EM+G + N+ V+ DTD
Sbjct: 299 AVKSGKIYMGKKYRTPSENIHIRQCL-MENGHGAVTVGSEMAGGVKNLVVEECRFYDTDR 357
Query: 109 -------KGRGGN--IENIIIRNIKMERVKIPIKIS 135
+GRG + ++ II R I M++V P I+
Sbjct: 358 GLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVIN 393
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 45/170 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
V+ N+L+ S L + P T+HPV S NTDG DP+C
Sbjct: 221 VQFYRCRNVLV-SGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLYNTDGCDPECCSDVLI 279
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIF 98
+ + VAVKSG D DG + PS NI VR R SG G+ +G EMSG +
Sbjct: 280 TGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSG---RWGGMTVGSEMSGGVR 336
Query: 99 NVTVD-------------------HLDTDKGRGGNIENIIIRNIKMERVK 129
++ + ++ K RGG I+ + IRN + V+
Sbjct: 337 DIFAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVE 386
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 46/185 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-----------IAPNTDGIDPDC------ 43
V+ N+L+ S+L + P T+HPV S NTDG DP+C
Sbjct: 227 VQFYRCRNVLV-SDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLYNTDGCDPECCSDVLI 285
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIF 98
+ + VAVKSG D DG + PS NI VR + SG G+ +G EMSG +
Sbjct: 286 TGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSG---RWGGMTVGSEMSGGVR 342
Query: 99 NVTVD-------------------HLDTDKGRGGNIENIIIRNIKMERVKIPIK-ISRGS 138
++ + ++ +K RGG I+ + IRN + V+ I ++
Sbjct: 343 DIFAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAY 402
Query: 139 NGHPD 143
NG D
Sbjct: 403 NGGED 407
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 40/155 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++I + NSP IHPV C S PN DG +P DC ++G+
Sbjct: 230 VLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINSHGPNNDGCNPESCTDVLIKDCDFDTGD 289
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGREMSGRIFNV------ 100
+A+KSG + DG + P+ NI V R G G+ +G E+SG + N+
Sbjct: 290 DCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGH----GGITVGSEISGGVRNLFASNCR 345
Query: 101 ----TVDH---LDTDKGRGGNIENIIIRNIKMERV 128
+DH + + RGG +EN+ RNI + +V
Sbjct: 346 LDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQV 380
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 56/226 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
V ++N N +L+ F NSP IHP+ + N DG+D +
Sbjct: 241 VSIVNCNKVLL-DGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLESCKNV 299
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG P+ N+ V+ + G IG EMSG +
Sbjct: 300 LIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKN-NTVYHAHGGFVIGSEMSGGVK 358
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIK-------------I 134
N+ V + + +GRGG +ENI I +I M + IP + I
Sbjct: 359 NINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINM--INIPTEAIRFNMFYSGNAPI 416
Query: 135 SRGSNGHPDEGRDPKAI------PKIRGISFVNVFSVNTTKAPICM 174
+ DE RD + + P + I N+ + N+ KA M
Sbjct: 417 LEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFM 462
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 54/204 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + ++ NSP T++P+ C + +PNTDGIDP+ C+I+
Sbjct: 142 ITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDPESCRNVRISNCHIDV 201
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+KSG + +A ++ T T V G EMSG I NVT+
Sbjct: 202 GDDCIAIKSGTED-------TEERVACENITITNCTMVHGHGAVVFGSEMSGDIRNVTIS 254
Query: 104 HL---DTD--------KGRGGNIENIIIRNIKMERVKIPIKIS-------RGSNGHP-DE 144
+ DTD +GRGG +E++ + NI ME V P I+ RG + + D+
Sbjct: 255 NCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFCGPRGKDQYVWDK 314
Query: 145 GRDP--KAIPKIRGISFVNVFSVN 166
P P R + F N+ + N
Sbjct: 315 NPYPVTAETPMFRRLHFANITARN 338
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 44/159 (27%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I ++ NSP T++P+ C + +PNTDGI+P+ C I+
Sbjct: 144 VTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDV 203
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD 103
G+ +A+K+G + IA ++ T T GV +G EMSG I NVT+
Sbjct: 204 GDDCIAIKAGTEDT-------QERIACENITITNCTMVHGHGGVVLGSEMSGDIRNVTIS 256
Query: 104 H-----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ L + +GRGG IE+I + NI ME V P
Sbjct: 257 NCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICP 295
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 36/158 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPF 293
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
++I + F NSP T+HP+ N D +D + C ++
Sbjct: 460 VLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWFGQNNDALDLESCSYAIVDGCTFDT 519
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G P+ N+ ++ + G IG EMSG + NV VD+
Sbjct: 520 GDDAITLKSGRDEQGRKRGVPTENVIIKNTT-VFHGHGGFVIGSEMSGGVKNVFVDNCSF 578
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
T + RGG +ENI I NI M +
Sbjct: 579 LGTDIGLRFKTKRDRGGVVENIYISNIAMNNI 610
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I ++ NSP T++P+ C + +PNTDGI+P+ C I+
Sbjct: 144 VTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDV 203
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G + + P NI + + V +G EMSG I NVT+ +
Sbjct: 204 GDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVF 260
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIP 131
L + +GRGG IE+I + NI ME V P
Sbjct: 261 KQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVICP 295
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 40/159 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++IS+L + P T+HPV C S+ NTDG+DP+ C + +
Sbjct: 235 VLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLHNTDGVDPEASRLVHITGCRFNTND 294
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
VAVK+G D DG + PS +I V+ + G+ +G EMSG + V +
Sbjct: 295 DCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSEMSGGVRRVFAEDCRINP 353
Query: 104 -------------HLDTDKGRGGNIENIIIRNIKMERVK 129
+L K RGG ++ + +R + V+
Sbjct: 354 PDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVE 392
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 36/155 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---------YIESGN 49
+ + F NSP +HP+ C S A N DG+D + + G+
Sbjct: 241 LEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCKNALIVNSSFDVGD 300
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LD 106
+ +KSG D DG AR N+ V + G +G EMSG + N++V++ L
Sbjct: 301 DGICLKSGKDEDGRRRARACENVIVDGCT-VYKGHGGFVVGSEMSGGVRNISVNNCQFLG 359
Query: 107 TD--------KGRGGNIENIIIRNIKMERVKIPIK 133
TD +GRGG +ENI IRNI M + IP +
Sbjct: 360 TDVGLRFKSKRGRGGVVENIWIRNISM--IDIPTE 392
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I ++ NSP T++P+ C + +PNTDGI+P+ C I+
Sbjct: 144 VTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDV 203
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G + + P NI + + V +G EMSG I NVT+ +
Sbjct: 204 GDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVF 260
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIP 131
L + +GRGG IE+I I NI ME V P
Sbjct: 261 KQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICP 295
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLDLESCKNA 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG ARP N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI I N+ M
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 386
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 241 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLDLESCKNA 299
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG ARP N+ V + G +G EMSG +
Sbjct: 300 LIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 358
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI I N+ M
Sbjct: 359 NVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 396
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID--------- 40
++N+ +++ + F NSP +HP CS A N DGID
Sbjct: 223 VLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGIDLESSTNTLI 282
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG---RI 97
+ + G+ + +KSG D G + +P+ N+ VR G IG EMSG I
Sbjct: 283 ENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV-VYHAHGGFVIGSEMSGGAKNI 341
Query: 98 FNVTVDHLDTD--------KGRGGNIENIIIRNIKMERV 128
F L TD +GRGG ++NI + NI M+ +
Sbjct: 342 FVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDI 380
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 135 NNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 194
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 195 DVGDDCVTLKSG--TEDCKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 251
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 252 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 288
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 83/213 (38%), Gaps = 51/213 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
V + NS IL+ F NSP IHP+ + N DG+D
Sbjct: 242 VSIKNSKRILL-DGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGLDLESCKNV 300
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
D + G+ + KSG D DG P+ N+ V+ + G IG EMSG +
Sbjct: 301 LIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKN-NIVYHGHGGFVIGSEMSGGVR 359
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIK-------------I 134
NV + + TD +GRGG +ENI I NI M + IP +
Sbjct: 360 NVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDM--INIPTDVINFNLFYGGNSPV 417
Query: 135 SRGSNGHPDEGRDPKAIPKIRGI-SFVNVFSVN 166
DE RD A+P SF N+F N
Sbjct: 418 LEADQSAEDEARDEVAVPVSETTPSFKNIFMKN 450
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDCY---------IES 47
L I+ + NSP T+HPV C +PNTDG++P+ I
Sbjct: 232 LTIAGITVRNSPSWTVHPVLCEDVLAVGLTIRNHPDSPNTDGLNPESSQNIRLVGLDISV 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVR-----RVSGTTPTCSGVGIGREMSGRIFNVTV 102
G+ VA+K+G RP+ N+ +R R G V +G EMS I +V++
Sbjct: 292 GDDCVAIKAGKRDPRGGPDRPTRNVEIRNCLMQRGHG------AVVMGSEMSQGISDVSI 345
Query: 103 DH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRD 147
+ T +GRGG + I + + +ME V PI ++ ++G D +
Sbjct: 346 SRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNAFYFCDADGRSDYVQS 405
Query: 148 PKAI------PKIRGISFVNV 162
A+ PKI GI N+
Sbjct: 406 RTALPVSLTTPKIEGIDIRNL 426
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 35/156 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
+ L NIL+ +PF IHP+ S N DG DP+
Sbjct: 186 INLYKCKNILL-EGFTINRAPFWLIHPLLSENVTIRKVKMQSHGYNNDGCDPESCNNVLI 244
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+KSG D DG PS NI VR +GV IG E++G NV
Sbjct: 245 EYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGGCRNV 303
Query: 101 TVDHLDTDKG-------------RGGNIENIIIRNI 123
V++ D RGG +EN+ +RNI
Sbjct: 304 WVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNI 339
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 35/149 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
+++ + NSPF IHP + N DG+DP+ C + G+
Sbjct: 218 VLLEGVKITNSPFWVIHPFMSKDVVIRDVQVFAHGHNNDGVDPEMSQNMLIENCIFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+AVKSG + D + P+ NI +R S + IG E+SG + NV ++
Sbjct: 278 DAIAVKSGRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAIGSELSGGVENVYMENCEVQE 336
Query: 104 --------HLDTDKGRGGNIENIIIRNIK 124
++ T++ RGG + N+ ++NI+
Sbjct: 337 GAKLNHLLYVKTNERRGGYVRNVHMKNIQ 365
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 42/161 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-----------PNTDGIDPDCYIE--- 46
+++ ++ +L+ ++ NSPF H VY A PN DG+D D +
Sbjct: 212 IQIFDAERVLL-ADYTVRNSPFWINHLVYTDDAVVRGLTVDSHNPNNDGVDVDSSTDVLI 270
Query: 47 ------SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ V VKSG D DG + RPS N+ VR G+ +G EMSG I +V
Sbjct: 271 EHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRH--NDMGGEDGIALGSEMSGGISHV 328
Query: 101 TVDHLDTD------------KG---RGGNIENIIIRNIKME 126
TD KG RGG +E+I +RN ++
Sbjct: 329 YF----TDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDID 365
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++L+ N+L+ ++PF HPV+C S+ PN+DG DP+
Sbjct: 309 IQLIGCTNVLL-QGYHVTHTPFWQHHPVHCRNIVIRNVHCESLGPNSDGFDPEACDHVLI 367
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+K+G D D PS NI ++ + + V +G EM+G I NV
Sbjct: 368 DGCTFDTGDDCIAIKAGKDLD--TQYGPSQNIVIQNCTMQSGH-GAVTLGSEMAGGIQNV 424
Query: 101 ------------------TVDHLDTDKGRGGNIENIIIRNIKM 125
T L T+ RGG + N +R+I +
Sbjct: 425 YAQNLVFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISI 467
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
+N ++I L NSP TIHP +PNTDG++P+
Sbjct: 229 FLNQCKNILIEGLTIKNSPAWTIHPFQSENLKFINLTIENPQNSPNTDGLNPEASKNVLI 288
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C G+ +A+KSG + + + + VR GV IG EMSG + V
Sbjct: 289 LGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCY-MEYGHGGVVIGSEMSGGVKEV 347
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V+ + T +GRGG I+ I I+M RVK P I+
Sbjct: 348 YVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTIN 393
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 49/212 (23%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD------- 42
+N + I+ + NSP IHP +CS ++PNTDG++P+
Sbjct: 235 FLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEI 294
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C G+ +AVK+G G PSSNI +R+ S + +G EM+ I N+
Sbjct: 295 TGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNL 353
Query: 101 TVDH---LDTD--------KGRGGN--IENIIIRNIKMERV---KIPIKISR----GSNG 140
L+TD +GRG + I+ I+ +I+M+ V P I+ +G
Sbjct: 354 QARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDG 413
Query: 141 HPD--EGRDPKAI----PKIRGISFVNVFSVN 166
H + + ++P A+ P+I+ + F N+ + N
Sbjct: 414 HSEYVQCKEPLAVDERTPQIKELCFRNIQAKN 445
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 230 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNA 288
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG AR N+ V + G +G EMSG +
Sbjct: 289 LIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 347
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI +RN+ M
Sbjct: 348 NVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSM 385
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 40/180 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGN 49
+ + NSP T+HP++ +PNTDG+DP+ + G+
Sbjct: 235 VQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGD 294
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + G + R S I +R S V IG EM+G + ++ V+
Sbjct: 295 DCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMAGGVKHILVEQCLFNE 353
Query: 105 ------LDTDKGRG--GNIENIIIRNIKMERVKIPIKIS----RGSNGHPDEGRDPKAIP 152
+ T +GRG +E++ R+I+ME+V P+ ++ +GH + + + +P
Sbjct: 354 TDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTKETLP 413
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKERIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIICNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 71/170 (41%), Gaps = 45/170 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
V+ N+L+ S L + P T+HPV S NTDG DP+C
Sbjct: 177 VQFYRCRNVLV-SGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLYNTDGCDPECCSDVLI 235
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR--VSGTTPTCSGVGIGREMSGRIF 98
+ + VAVKSG D DG + PS NI VR SG G+ +G EMSG +
Sbjct: 236 TGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSG---RWGGMTVGSEMSGGVR 292
Query: 99 NVTVD-------------------HLDTDKGRGGNIENIIIRNIKMERVK 129
+V + ++ K RGG I+ + IRN + V+
Sbjct: 293 DVFAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVE 342
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 34/162 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 146 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 205
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 206 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 263
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPI 132
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 264 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 305
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKERIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 IFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHNDGPSTDGIDIDSSTDVRIY 191
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S I +V
Sbjct: 192 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDVY 249
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 250 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 34/159 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHP----------VYCS---IAPNTDGIDPDC------ 43
++N +++ + F NSP +HP VY A N DG+D +
Sbjct: 229 VLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKNVLV 288
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ G+ + +KSG D +G A P+ N+ +R S G IG EMSG N+
Sbjct: 289 EGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRH-STVYHAHGGFVIGSEMSGGAKNI 347
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERV 128
+ T +GRGG +ENI RNI M+ +
Sbjct: 348 FISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDI 386
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 163 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 222
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 223 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 280
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 281 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 321
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYI 45
N + I + NSP T++P+ C +PNTDGI+P+ CYI
Sbjct: 139 NNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGVRISNCYI 198
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ V +KSG + P NI + GV IG EMSG + NV + +
Sbjct: 199 DVGDDCVTLKSG--TEDCKERIPCENITITNCI-MAHGHGGVVIGSEMSGGVRNVVISNC 255
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIP 131
+ T +GRGG +E+I + NI M+ V P
Sbjct: 256 VFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDYSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 14 NLAFCNSPFRTIHP--VYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
NL C S + V + P+TDGID D C + + + VKSG +
Sbjct: 173 NLHVCYSKQVNLQRLRVMNATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+ R + +I +R T SG+ +G E SG I NV ++H + + + R
Sbjct: 233 QQLGRTARDIIIRDC--TLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKISRG---SNGHPDEGRDPKAIPKIRGIS 158
GG I+NI++R++KME V P + + ++ D K P R ++
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPPHWRKLA 340
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 163 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHNDGPSTDGIDIDSSTDVRIY 222
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S I +V
Sbjct: 223 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDVY 280
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 281 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 321
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 14 NLAFCNSPFRTIHP--VYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
NL C S + V + P+TDGID D C + + + VKSG +
Sbjct: 173 NLHVCYSKQVNLQRLRVMNATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+ R + +I +R T SG+ +G E SG I NV ++H + + + R
Sbjct: 233 QQLGRTARDIIIRDC--TLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKISRG---SNGHPDEGRDPKAIPKIRGIS 158
GG I+NI++R++KME V P + + ++ D K P R ++
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPPHWRKLA 340
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 54/208 (25%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGN 49
+ ++ +SP T+HP+ C +PNTDGIDP+ C+I+ G+
Sbjct: 150 LRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCRNVRISGCHIDVGD 209
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVD-- 103
+A+K+G + A P +A V T T GV +G EMSG I NV V
Sbjct: 210 DCIALKAGTE------ASP-ERVACENVVVTGCTLVHGHGGVVLGSEMSGGIRNVVVADC 262
Query: 104 ---------HLDTDKGRGGNIENIIIRNIKMERVKIPIKI----SRGSNGHP----DEGR 146
L +GRGG +E++ + N+ M+ V P+ + RG G D G
Sbjct: 263 VFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGDSPHVGDRGA 322
Query: 147 DP--KAIPKIRGISFVNVFSVNTTKAPI 172
P P R I+ +V + N A +
Sbjct: 323 LPVDATTPLFRRITVAHVSARNVRAAAV 350
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNA 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG R N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI IRNI M
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 14 NLAFCNSPFRTIHP--VYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
NL C S + V + P+TDGID D C + + + VKSG +
Sbjct: 173 NLHVCYSKQVNLQRLNVMNATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+AR + +I +R T SG+ +G E SG I NV ++H + + + R
Sbjct: 233 QQLARTARDIIIRDC--TLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKIS 135
GG I+NII+R++ ME V P +
Sbjct: 291 GGWIKNIIVRHLIMEDVGYPFMLQ 314
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + K RGG IENI + N+ M V+ P
Sbjct: 274 IRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 40/180 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGN 49
+ + NSP T+HP++ +PNTDG+DP+ + G+
Sbjct: 124 VQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGD 183
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + G + R S I +R S V IG EM+G + ++ V+
Sbjct: 184 DCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMAGGVKHILVEQCLFNE 242
Query: 105 ------LDTDKGRG--GNIENIIIRNIKMERVKIPIKIS----RGSNGHPDEGRDPKAIP 152
+ T +GRG +E++ R+I+ME+V P+ ++ +GH + + + +P
Sbjct: 243 TDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTKETLP 302
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNA 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG R N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI IRNI M
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA------------PI 172
ME V + I+ + + HPD+ DP +P I ++ N+ N + A I
Sbjct: 1 MENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAI 60
Query: 173 CMKNVSLLVLAPS--VKWQCQFVSGFNGQVFPLPCPQLQN 210
C+ N++ + A S W C VSG++ VFP PC +L++
Sbjct: 61 CLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRD 100
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNMMDVQFP 314
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 22/119 (18%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P+TDGID D C + G+ +A+KSG D +G + R SS I V R +
Sbjct: 32 PSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSG 89
Query: 85 SGVGIGREMSGRIFNVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPI 132
GV IG E+S + +V + +D + K RGG IENI + N+ M V+ P
Sbjct: 90 YGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 148
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N DG+D +C +
Sbjct: 245 VLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQNGDGLDIESCKNTIVTNCSFDV 304
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V G +G EMSG + N++V +
Sbjct: 305 GDDGICIKSGKDADGRKRGIPCENVIVDNCV-VYHGHGGFVVGSEMSGGVKNISVSNCQF 363
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +ENI I+NI M + IP
Sbjct: 364 LGTDVGLRFKSTRGRGGVVENIFIKNIDM--INIP 396
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD---------CYIESG 48
+ I + N+PF + PVYC P DGID + C + SG
Sbjct: 232 VYIEGITLHNTPFWNVVPVYCDNVIIRGITVQSVGIPRGDGIDIESSRNVLIEYCTLSSG 291
Query: 49 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL--- 105
+ +K+G DGI + +P+ N+ +R G+ G E +G I NV V
Sbjct: 292 DDCFTIKAGRGEDGIRVNKPTENVVIRHCLARE-GHGGITCGSETAGMIRNVYVRDCVFD 350
Query: 106 DTDKG--------RGGNIENIIIRNIKM----ERVKIPIKISRGSNGHPDEGRDPKAI-- 151
DTD G R G ENI+ NI+M + VK + SR G + P+ +
Sbjct: 351 DTDTGLRFKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVND 410
Query: 152 --PKIRGISFVNV 162
P R I+ N+
Sbjct: 411 LTPAYRNITARNI 423
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 37/166 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNT 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG R N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIK 133
NV+V + L TD +GRGG +ENI IRNI M + IP +
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISM--IDIPTE 392
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 14 NLAFCNSPFRTIHP--VYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
NL C S + V + P+TDGID D C + + + VKSG +
Sbjct: 173 NLHVCYSKQVNLQRLRVMNATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+ R + +I +R T SG+ +G E SG I NV ++H + + + R
Sbjct: 233 QQLGRTARDIIIRDC--TLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKI 134
GG I+NI++R++KME V P +
Sbjct: 291 GGWIKNIVVRHLKMEDVCYPFML 313
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP---------DCYIESGN 49
++++ NSP ++PV C S PN DG DP D Y ++G+
Sbjct: 226 FYMADVLVKNSPMWNLNPVLCENVLIERVKVISHGPNNDGFDPEACKNVWIKDSYFDTGD 285
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV-----TVD- 103
+A+KSG D DG + +P+ N + GV IG E++G N+ +D
Sbjct: 286 DCIAIKSGRDEDGRGIGKPAENHIIENCE-MKDGHGGVVIGSEIAGGAKNIYAIGNVMDS 344
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVK 129
+ T RGG IEN+ N K+ K
Sbjct: 345 KNLERALRIKTSSNRGGIIENVFFYNTKVGAYK 377
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + N+PF +HP+ S PN DG+DP+ +G+
Sbjct: 246 VLIQGITIINAPFWILHPIKSKNIIVDGVNIRSHGPNNDGLDPEYSQNVLIKNSIFNTGD 305
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV--DHLD- 106
+A+K+G D +G + + NI VR GV IG EMS + NV V +H+D
Sbjct: 306 DCIAIKAGRDEEGRRVGIMTENIIVRDCK-MIDGHGGVVIGSEMSAGVRNVFVYNNHMDS 364
Query: 107 ----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPKIRG 156
T+ RGG ++ + ++N+ + VK + + N + R P+IR
Sbjct: 365 PELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAV-LHITMNYKDYKNRTGNFTPQIRN 423
Query: 157 ISFVNVFSVNTTKAPI 172
I +V N K I
Sbjct: 424 ILLEDVKVKNGGKYAI 439
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 63/147 (42%), Gaps = 42/147 (28%)
Query: 20 SPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGNGLVAVKSGWD 59
SPF TIH C + N DG+D DC + G+ V +K+G +
Sbjct: 231 SPFWTIHLYMCDGGIVRNLDVYAHGHNNDGVDLEMSRNFLIEDCKFDQGDDAVVIKAGRN 290
Query: 60 HDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDHL----------- 105
D + P NI +R + G T +GIG EMSG I NV +
Sbjct: 291 QDAWRLDTPCENIVIRNCDIIKGHTL----LGIGSEMSGGIRNVYMHDCAAPDSVFRLFF 346
Query: 106 -DTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI + N+ KM+RV
Sbjct: 347 AKTNHRRGGFIENIHMENVKAGKMQRV 373
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 191
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 192 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 249
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 250 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHNDGPSTDGIDIDSSTDVRIY 191
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 192 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 249
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKMERVKIP 131
+ +D + + RGG IENI + N+ M V+ P
Sbjct: 250 IHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 38/189 (20%)
Query: 24 TIHPVYC-----------SIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGI 63
+IHP C S N DGID D C I SG+ +++KSG +
Sbjct: 200 SIHPTCCDNLVFRNLTIRSTKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAY 259
Query: 64 AMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH------------LDTDKGR 111
M RP+ ++ + + + +GIG E S I NV ++H + + GR
Sbjct: 260 TMNRPTEDVRITNCTLEGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGR 319
Query: 112 GGNIENIIIRNIKMERVKIP-IKISRGSNGHPDEGRDP--KAIPKIRGISFVNVFSVNTT 168
G IEN+ +R++ R+++ ++I + + G D P + +P R F N +
Sbjct: 320 GAFIENLTVRDMDAARMRMGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRFEN---IRVQ 376
Query: 169 KAPICMKNV 177
AP+ ++ +
Sbjct: 377 DAPVLVEAI 385
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 36/156 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ I ++ NSP T++P+ C + +PNTDGI+P+ C I+
Sbjct: 167 VTIKDVMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDV 226
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+K+G + + P NI + + V +G EMSG I NVT+ +
Sbjct: 227 GDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSGDIRNVTISNCVF 283
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
L + +GRGG +E+I + NI ME V P
Sbjct: 284 KQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICPF 319
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 35/157 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD----CYI 45
++ N+L+ +L +SPF IHPV+C S N DG DP+ I
Sbjct: 207 IQFYGCKNVLV-EDLKIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLI 265
Query: 46 ES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
E G+ +A+KSG D DG + + + N+ +R + IG EMSG + N+
Sbjct: 266 EGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMSGGVRNI 322
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKME 126
++ + ++ RGG EN+ +R I+ +
Sbjct: 323 YIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 359
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 36/156 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS------------IAPNTDGIDPDC----- 43
V+ +S NIL+ + NSP IHPV PN DG++P+
Sbjct: 230 VQFYDSRNILV-QGVTLKNSPMWMIHPVLSHNITVDGVVLDSPEGPNNDGVNPESSRDVV 288
Query: 44 ----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
++G+ +A+KSG + DG + PS NI + + GV +G EMSG + N
Sbjct: 289 IKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIEN-NHMQDGHGGVVMGSEMSGSVRN 347
Query: 100 VTVDH-------------LDTDKGRGGNIENIIIRN 122
V H + T+ RGG +EN+ R+
Sbjct: 348 VFAQHNVMDSPNLHRALRIKTNSVRGGIVENVYFRH 383
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 45/164 (27%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGIDPDC------ 43
++ + NIL+ ++ P TIHPV C N+DG+DP+C
Sbjct: 224 IQFYDCRNILM-QDITVLEPPMWTIHPVLCRNVTLRNVDVIGRINNSDGVDPECTSDMLI 282
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR--VSGTTPTCSGVGIGREMSGRIF 98
+ + +AVKSG D DG + PS NI +R SG GV +G EMSG +
Sbjct: 283 TGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSG---RWGGVAVGSEMSGGVR 339
Query: 99 NVTVDH-------------------LDTDKGRGGNIENIIIRNI 123
+V + + T+K RGG+I + IR
Sbjct: 340 DVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRF 383
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 45/164 (27%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGIDPDC------ 43
++ + NIL+ ++ P TIHPV C N+DG+DP+C
Sbjct: 209 IQFYDCRNILM-QDITVLEPPMWTIHPVLCRNVTLRNVDVIGRINNSDGVDPECTSDMLI 267
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR--VSGTTPTCSGVGIGREMSGRIF 98
+ + +AVKSG D DG + PS NI +R SG GV +G EMSG +
Sbjct: 268 TGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSG---RWGGVAVGSEMSGGVR 324
Query: 99 NVTVDH-------------------LDTDKGRGGNIENIIIRNI 123
+V + + T+K RGG+I + IR
Sbjct: 325 DVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRF 368
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPDC----- 43
V S NIL+ + SP IH VY A N DG+ D
Sbjct: 220 VVFWKSKNILV-EGITLNESPMWNIHLVYSQNAIVRDITVNSLDSQNGDGVVVDSSHDVL 278
Query: 44 ----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG--TTPTCSGVGIGREMSGRI 97
+ +G+ + +KSG++ DG+A+ P+ N+ +R GV G E SG I
Sbjct: 279 LEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSGGVVFGSETSGGI 338
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERV 128
NV V T +GRG IENI +R+I M+ +
Sbjct: 339 RNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKDI 380
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 34/155 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID--------- 40
+ L N+L+ SPF TIH C + N DGID
Sbjct: 210 IHLNRCRNVLL-DGFKIRESPFWTIHLYMCKGGIVRGLDVKANGHNNDGIDLEMSRNFLI 268
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+C + G+ V +KSG + D + P NI VR + +GIG E+SG + NV
Sbjct: 269 ENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSGGVRNV 327
Query: 101 TVDHLD------------TDKGRGGNIENIIIRNI 123
+ H D T++ RGG +ENI + ++
Sbjct: 328 YMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDV 362
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 37/182 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V L N NI + L NSP T+HP Y +PNTDG+DP+
Sbjct: 226 VFLHNCKNIAM-QGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENV 284
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ VA+KSG + + +P+ NI +R S V IG E++ ++
Sbjct: 285 LILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVY 343
Query: 99 NVTVD-----------HLDTDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+V+V+ + T +GRG ++NI NI M+ V +P + PD
Sbjct: 344 DVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPDGH 403
Query: 146 RD 147
D
Sbjct: 404 SD 405
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 34/155 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID--------- 40
+ L N+L+ SPF TIH C + N DGID
Sbjct: 210 IHLNRCRNVLL-DGFKIRESPFWTIHLYMCKGGIVRGLDVKANGHNNDGIDLEMSRNFLI 268
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+C + G+ V +KSG + D + P NI VR + +GIG E+SG + NV
Sbjct: 269 ENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSGGVRNV 327
Query: 101 TVDHLD------------TDKGRGGNIENIIIRNI 123
+ H D T++ RGG +ENI + ++
Sbjct: 328 YMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDV 362
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSCNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP IHP+ C + N D +D +C+ ++
Sbjct: 250 ILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG N+ ++ + G IG EMSG + NV V
Sbjct: 310 GDDAICLKSGKDEDGRRRGESCENVIIKN-NTVLHGHGGFVIGSEMSGGVRNVYVSGCSF 368
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ +GRGG +ENI I NI M + IP
Sbjct: 369 VGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS---------IAP----NTDGIDPDC------ 43
+N + + L NSP TIHP + + +AP NTDG+DP+
Sbjct: 226 FLNGCENISLVGLTVKNSPSWTIHPYFSNHLRFLGLNVLAPKDSHNTDGLDPESCRQVEL 285
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS-----GTTPTCSGVGIG-REMS 94
+ G+ +AVKSG + G PS +I +R+ S G+ S +G G R+++
Sbjct: 286 AGIHFSVGDDCIAVKSGKIYMGKTYRTPSEHITIRQCSMNDGHGSVVIGSEIGAGVRDLT 345
Query: 95 GR--IFNVTVDHL--DTDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPD----- 143
R IF T L T +GRG + ++ + NI+M+ V P ++ PD
Sbjct: 346 VRDCIFKDTDRGLRIKTRRGRGEDCVVDRVAFENIRMDGVLTPFVVNCFYFCDPDGRTEY 405
Query: 144 -EGRDP----KAIPKIRGISFVNVFSVNTTKAPIC 173
+ ++P + P I+ +SF ++ + N A +C
Sbjct: 406 VQSKEPLPVDERTPSIQELSFKDIHAENAHYAAVC 440
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSCNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSRNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCNILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 35/157 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD----CYI 45
++ N+L+ +L +SPF IHPV+C S N DG DP+ I
Sbjct: 207 IQFYGCKNVLV-EDLKIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESCTNVLI 265
Query: 46 ES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
E G+ +A+KSG D DG + + + N+ +R + +G EMSG + N+
Sbjct: 266 EGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITVGSEMSGGVRNI 322
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKME 126
++ + ++ RGG EN+ +R I+ +
Sbjct: 323 YIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEAD 359
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSRNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSRNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 40/158 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID--------- 40
+ L N+L+ + + SPF TIH C + N DGID
Sbjct: 211 IHLNRCRNVLL-EDFSIRESPFWTIHLYMCKGGIVRRLDVKANGHNNDGIDLEMSRDFLI 269
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRI 97
+C + G+ V +KSG + D + PS NI +R ++G T +GIG E+SG I
Sbjct: 270 ENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTL----LGIGSELSGGI 325
Query: 98 FNVTVDHLD------------TDKGRGGNIENIIIRNI 123
N+ + H D T+ RGG +ENI + +I
Sbjct: 326 RNIFMHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDI 363
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSCNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF T+H C + N DGID +C + G+
Sbjct: 218 VLLDEFKIRQSPFWTVHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSRNFLIENCVFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI VR + G T +GIG EMSG + NV + +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVVRHCNILKGHTL----LGIGSEMSGGVRNVYMHNCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 334 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
+ L N+L+ + F NSP T+HP+ C A N+D +D +
Sbjct: 455 ISLTRCKNVLL-EGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLESCRNG 513
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C ++G+ + +KSG D G P+ N ++ G IG EMSG +
Sbjct: 514 IVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK-VYHAHGGFVIGSEMSGGVR 572
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
N+ V + T +GRGG +E+I + ++ M +
Sbjct: 573 NMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEI 613
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 37/176 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
L+ ++IL+ + NSP T+HP+ S +PNTDGIDP+
Sbjct: 227 LLECHDILV-EGITIKNSPSWTVHPIRSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEI 285
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
G+ +A+KSG + RPS NI +R V +G EMSG + NV
Sbjct: 286 LGVKFSLGDDCIAIKSGKISIPLKERRPSENIIIRNCL-MQYGHGAVVLGSEMSGGVKNV 344
Query: 101 TVDHL---DTDKG------RG-GN---IENIIIRNIKMERVKIPIKISRGSNGHPD 143
V+ DTD+G RG GN I+ I ++NI+M+ V P ++ PD
Sbjct: 345 FVERCFFEDTDRGLRIKTRRGRGNTAIIDQIYVKNIQMKGVLTPFTLNAFYFCDPD 400
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID--------- 40
++ S + +++ + F NSP +HP+ A N DGID
Sbjct: 221 VLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLESCSNVLI 280
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ + G+ + +KSG D DG A P+ ++ +R + G +G EMSG + NV
Sbjct: 281 ENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCT-VYAAHGGFVVGSEMSGGVNNV 339
Query: 101 TVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
V + T +GRGG +ENI I++I M+ +
Sbjct: 340 YVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDI 378
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 37/182 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V L N NI + L NSP T+HP Y +PNTDG+DP+
Sbjct: 226 VFLHNCKNIAM-QGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENV 284
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ VA+KSG + + +P+ NI +R S V IG E++ ++
Sbjct: 285 LILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVY 343
Query: 99 NVTVD-----------HLDTDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+V+V+ + T +GRG ++NI NI M+ V +P + PD
Sbjct: 344 DVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENIIMKDVCMPFTANMFYFCDPDGH 403
Query: 146 RD 147
D
Sbjct: 404 SD 405
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 40/224 (17%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
+N +++ + NSP IHP + + +PNTDG+DP+
Sbjct: 248 FLNHCEHVVVQGIRVQNSPSWNIHPYFSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEI 307
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
Y G+ +A+KSG + G PS +I +R+ S + IG EM+G + ++
Sbjct: 308 AGVYFSLGDDCIAIKSGKIYMGAKYRVPSEDIVIRQCCMRDGHGS-ITIGSEMAGGVKHL 366
Query: 101 TVD-----HLD------TDKGRG--GNIENIIIRNIKMERVKIPIKIS----RGSNGHPD 143
TV H D T +GRG I+ I+ +I+M+ V P I+ +GH +
Sbjct: 367 TVKDCLFLHTDRGLRIKTRRGRGEAAVIDGILFEHIRMDHVMTPFVINCFYYCDPDGHSE 426
Query: 144 EGRDPKAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVK 187
+ +P +V +A C + L P K
Sbjct: 427 YVATKEMLPIDERTPYVKELVFRNIEASNCHVAAAYLYGLPEQK 470
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 44/166 (26%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPD----- 42
L++ ++ + + L F + F TI +Y S P+TDG+D D
Sbjct: 190 LVSESSDVTVKGLTFRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYI 249
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGTTPTCSGVGIGREMS 94
C I+ + +KSG D DG+ + RP+ I +R R G TC G E S
Sbjct: 250 LVENCDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIRNCISRAGGGLLTC-----GSETS 304
Query: 95 GRIFNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
G I +V + L + RGG E+I IR+++M+ V+
Sbjct: 305 GGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 37/161 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDP---------DCYIE 46
+++ N+ NSP I P Y + ++ NTDGIDP I+
Sbjct: 155 ILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTID 214
Query: 47 SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD 106
+G+ +A+KSG + PS +I +R T G+ IG E++G ++NV + +
Sbjct: 215 TGDDNIAIKSGQP-NSPGGDEPSHDIVIR--DSTFLHGHGLSIGSEVAGGVYNVLAERIH 271
Query: 107 -----------TDKGRGGNIENIIIRNIKMERVKIPIKISR 136
+++ RG +++ + R++KME V PI IS
Sbjct: 272 FKGTGTGVRIKSNRDRGNELKHFVYRDLKMEDVNTPILISE 312
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 34/166 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHP--------VYCSI-----APNTDGIDPD------- 42
+N ++I + NSP TIHP + +I +PNTDG++P+
Sbjct: 229 FLNQCKNILIEGVTIKNSPAWTIHPFQSENLKFINLTIENPKNSPNTDGLNPEASKNVLI 288
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C G+ +A+K+G + + + + VR GV IG EMSG + V
Sbjct: 289 LGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCY-MEYGHGGVVIGSEMSGGVKEV 347
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V+ + T +GRGG I+ I I+M RVK P I+
Sbjct: 348 YVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTIN 393
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 35/156 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD------- 42
L N N+L+ + F NSP +HP+ C A N DG D +
Sbjct: 231 LNNCKNVLL-EGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCKNVLV 289
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C + G+ + +KSG D +G + N+ +R + G +G EMSG N+
Sbjct: 290 EHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRN-NTVYKGHGGFVVGSEMSGGAKNI 348
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKM 125
V T +GRGG +ENI I++I M
Sbjct: 349 FVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 42/161 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
++ S NIL+ + NSPF IHP + N DG+DP+
Sbjct: 210 IQFNRSENILL-QGVTITNSPFWVIHPYLSKNVSIKEVTVFAHGHNNDGVDPEMSQNIII 268
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRI 97
C + G+ +AVKSG + D +A P+ NI ++ ++G + IG E+SG I
Sbjct: 269 ENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKIINGHQL----MAIGSELSGGI 324
Query: 98 FNV-----------TVDHL---DTDKGRGGNIENIIIRNIK 124
N+ ++HL T++ RGG + NI + +I+
Sbjct: 325 ENIYMSNCQVEQGAKLNHLLFIKTNERRGGIVSNIYMDSIQ 365
>gi|300728596|ref|ZP_07061954.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774165|gb|EFI70799.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 453
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 90/221 (40%), Gaps = 54/221 (24%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS------IAPN------TDGIDPDCYIESGNGL 51
+NS N+L+ + S F I PVYC + N TDGID D S NGL
Sbjct: 211 VNSRNVLL-EGVTLERSVFWNIVPVYCENIIIRDVTVNSFGHARTDGIDFDS---SRNGL 266
Query: 52 V------------AVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
V +KSG DG+ RP+ NI +R G IG E + I N
Sbjct: 267 VEYTTLDCGDDCFTLKSGRGMDGVKRNRPTENIVIRHCK-VVNAAGGFTIGSETAAMIRN 325
Query: 100 VTVDHLDTD-----------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPD----- 143
V V ++ + + RGG EN+ + NI ++ K I G P+
Sbjct: 326 VYVYDIEMEHPRFALYFKSRRPRGGGAENVWMENIHAKQTKY-TAIKWDLLGSPEYVGKL 384
Query: 144 ----EGRDPKAI-PKIRGISFVNVFSVNTTKAPICMKNVSL 179
++P A+ PK R I F N ++ + P +K V L
Sbjct: 385 AERFAVKEPNALTPKFRNIHFKN---ISIDQCPTLIKMVGL 422
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
V + NS +L F NSP IHP + N DG+D +C
Sbjct: 235 VSIQNSKRVLF-DGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVECCKNV 293
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG+ P NI VR + GV +G EMSG +
Sbjct: 294 LVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRN-NIVYHGHGGVTVGSEMSGGVK 352
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERV 128
N+ V + + TD +GRGG +ENI I ++ M +
Sbjct: 353 NLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDI 393
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 34/148 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD----CYIES-----GN 49
+++ ++ +SPF IHPV+C S N DG DP+ IE+ G+
Sbjct: 225 VLVEDVQIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLIENMDFNVGD 284
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG D DG + + + N+ +R + IG EMSG + N+ ++
Sbjct: 285 DGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMSGGVRNIFIEDCKIDS 341
Query: 104 -----HLDTDKGRGGNIENIIIRNIKME 126
+ ++ RGG EN+ +R I+ +
Sbjct: 342 CRNGIYFKSNLDRGGYFENLNMRRIEAD 369
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VD-----------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ + + K RGG IENI + N+ M V+ P
Sbjct: 274 IHDINFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 35/157 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD----CYI 45
++ N+L+ ++ +SPF IHPV+C S N DG DP+ I
Sbjct: 207 IQFYGCKNVLV-EDVQIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLI 265
Query: 46 ES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
E+ G+ +A+KSG D DG + + + N+ +R + IG EMSG + N+
Sbjct: 266 ENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMSGGVRNI 322
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKME 126
++ + ++ RGG EN+ +R I+ +
Sbjct: 323 FIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 359
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 38/202 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
V+ + N+LI + +PF IHPV C PN DG DP+
Sbjct: 216 VQPYDCENVLI-EGVKLRGAPFWQIHPVLCRNLIVRGVDVLGHGPNNDGCDPESVDGALI 274
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C ++G+ +A+ SG + DG +A P+ NI +R GV +G ++SG +
Sbjct: 275 ERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCR-MKEGHGGVVVGSQISGGARWI 333
Query: 101 TVDHLDTDKG-------------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD 147
+ D RGG +EN R+I + V + + + + +EG +
Sbjct: 334 FAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVS---RAAVTCDFNYEEGAN 390
Query: 148 PKAIPKIRGISFVNVFSVNTTK 169
+ +P++R + + + N +
Sbjct: 391 GRFVPRLRNVVIERLRTKNAAR 412
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC------ 43
+N + +++ + NSP +HP + +PNTDG+DP+
Sbjct: 226 FLNHCDHVVLHGVTIQNSPSWNLHPYFSDDLRFLDLTILNPWDSPNTDGMDPESVNGLEI 285
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
Y G+ +A+KSG + G PS NI VR+ V IG EM+ + +V
Sbjct: 286 AGIYFSLGDDCIALKSGKYYMGHKYKVPSQNIEVRQCCMNNGH-GAVTIGSEMAAGVKHV 344
Query: 101 TVD-----HLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSN 139
V H D T +GRG + +E+I NI+M+ V P ++ N
Sbjct: 345 HVKDCLFLHTDRGLRIKTRRGRGKDAVVEDICFENIRMDHVLTPFVLNSFYN 396
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 45/187 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGI----DPDCYI 45
++ S+++L+ + ++P H +Y + PN DG+ D +
Sbjct: 210 LQFYESSDVLV-EGVTIVDAPMWVNHFIYSDDITVRDVTVKTHRPNNDGVAIDSSSDVLV 268
Query: 46 ES------GNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRI 97
E+ G+ V VKSG D DG + RPS NI VR R+SGT G IG EMSG +
Sbjct: 269 ENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTE---GGFAIGSEMSGGV 325
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNI------KMERVKIPIKISRGSNG 140
V V+ ++ + RGG +E + IR+I K+ R + +G N
Sbjct: 326 NTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQGGN- 384
Query: 141 HPDEGRD 147
HP RD
Sbjct: 385 HPPAFRD 391
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 36/156 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGN 49
+ L F P IHP +CS +PNTDGI+P+ C+ G+
Sbjct: 235 VQGLRFSMCPSWCIHPCFCSDLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGD 294
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG P S+I +R+ GV IG E+S + +VTV
Sbjct: 295 DCIAIKSGKGRRAQENPVPGSHIQIRQCFMENGH-GGVTIGSEISSGVHHVTVRDCCFRN 353
Query: 104 -----HLDTDKGRGGN--IENIIIRNIKMERVKIPI 132
+ T +GRG + ++ ++ NI ME+V P
Sbjct: 354 TDRGLRIKTRRGRGKSCVVDAVLFENIHMEQVDTPF 389
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
Query: 35 NTDGIDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 85
N DG DP+ +G+ A+KSG D +GIA+ARPS NI R +
Sbjct: 341 NGDGFDPNSSSNVWILGTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGH-G 399
Query: 86 GVGIGREMSGRIFNVTVDH-----LDTDKG-------------RGGNIENIIIRNIKMER 127
GV IG EMSG + NV V+ +D G RGG + NI +R+ + +
Sbjct: 400 GVTIGSEMSGGVRNVFVEDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINK 459
Query: 128 VKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTK 169
+ + R S D+ +P+ F ++ + N K
Sbjct: 460 ISVITNYDRTS---VDDLDSQTPLPQTENFKFSHITAPNWDK 498
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 22/110 (20%)
Query: 42 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIA-----VRRVSGTTPTCSGVGIGREMSGR 96
DCYI++G+ + +KSG D DG + RP+ NI+ V R G V +G E+SG
Sbjct: 239 DCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGA------VVLGSEISGW 292
Query: 97 IFNVTVDHLDTD-----------KGRGGNIENIIIRNIKMERVKIPIKIS 135
I N+ ++ D +GRGG IE++ N M+ V I IS
Sbjct: 293 IRNLVASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINIS 342
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 42/165 (25%)
Query: 3 LMNSNNILIISNLAFCNSPF---RTIHPVYCSI------------APNTDGIDPD----- 42
L+ ++ + +S + F + ++ YC+I P+TDGID D
Sbjct: 202 LVERSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNI 261
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGI---GREMSG 95
C ++ + + +KSG D DG+ + RP+ N+ VR + G G+ G E SG
Sbjct: 262 LIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR----KGAGLITCGSETSG 317
Query: 96 RIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
I NV TV L + RGG IENI + + E V+
Sbjct: 318 SIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENVR 362
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPDC------- 43
MN+ N+L+ ++ +P +H +Y A P+ + I D
Sbjct: 209 FMNAKNVLV-EDVRIIGAPMFVVHLLYTENATVRNVMIQTYPGPHANAIVADSSRFVHIS 267
Query: 44 --YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
YI++G+ + +KSG D DGI + RP+ ++ + + V IG E +G I +V
Sbjct: 268 DSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCT-VHHAHGAVVIGSETAGSIRDVV 326
Query: 102 ---VDHLDTD--------KGRGGNIENIIIRNIKMERVKIPIKISRGS--NGHPDEGRDP 148
+ +DT+ +GRGG ++++ N ME V I ++ G D +P
Sbjct: 327 ASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGGESDTKEEP 386
Query: 149 --KAIPKIRGISFVNV 162
+ PK R I NV
Sbjct: 387 VSERTPKFRNIGISNV 402
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 17 FCNSPFRTIHPVYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMAR 67
+C TI+ P+TDGID D C ++ + + +KSG D DG+ + R
Sbjct: 231 YCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNR 290
Query: 68 PSSNIAVRRVSGTTPTCSGVGI---GREMSGRIFNV-----------TVDHLDTDKGRGG 113
P+ N+ VR + G G+ G E SG I NV TV L + RGG
Sbjct: 291 PTENVVVRNCTAR----KGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGG 346
Query: 114 NIENIIIRNIKMERVK 129
IENI + + E V+
Sbjct: 347 TIENIYMTRVSAENVR 362
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD---------CYIESGNG 50
IS+L S F YC P+TDGID D C + G+
Sbjct: 167 ISDLTLMRSGFWNCQLTYCQQMEVSHLTVKENNGPSTDGIDIDSSSYVRVHNCELSCGDD 226
Query: 51 LVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---DT 107
+ VKSG D DG+ + +P+++I + + GV +G E+S I +V + + +T
Sbjct: 227 CIVVKSGRDGDGLRVNQPAAHIEIDHC--IIHSGYGVTLGSEVSAGISDVHIHDMIFENT 284
Query: 108 DKG--------RGGNIENIIIRNIKMERVKIPI 132
D G RGG I+N++ +++M V+ P
Sbjct: 285 DCGFRMKSSADRGGVIKNVVAEHLEMHNVQFPF 317
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 52/203 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
++I N+ F NSP T+HP C +PNTDG+DP+ C +
Sbjct: 145 VVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCCFDV 204
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGREMSGRIFNVTVDH 104
G+ +A+KSG + ++A NI + V G GV G EMSG I NVT+ +
Sbjct: 205 GDDCIAIKSGTEDASQSIA--CENIIISGCNMVHGH----GGVVFGSEMSGDIRNVTISN 258
Query: 105 L---DTDKG--------RGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDPK 149
DTD+G RGG I I + NI M+ V P+ I+ G G+ +
Sbjct: 259 CVFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIINSYYFCGKRGNEAYVWTKE 318
Query: 150 AI------PKIRGISFVNVFSVN 166
A+ PK+ +SF ++ + N
Sbjct: 319 ALPVDERTPKLSNLSFSHLIATN 341
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ ++I +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHNDGPSTDGIDIDSSTDVRIY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VD-----------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ + + + RGG IENI + N+ M V+ P
Sbjct: 274 IHDINFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 42/173 (24%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPD--- 42
+++ S + ++S L F T+H Y P+TDGID D
Sbjct: 162 IQIYKSQGVDLVS-LTLKRPGFWTVHICYSERVTVDGLTIRNNTDGKGPSTDGIDIDSSS 220
Query: 43 ------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR--VSGTTPTCSGVGIGREMS 94
C I+ + + +K+G D DG+ + P+ + + V G +GV IG E S
Sbjct: 221 DVLVAHCDIDCNDDAICLKAGRDADGLRVNLPTERVRITDNVVRG---GAAGVTIGSETS 277
Query: 95 GRIFNVTVDHL------------DTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
G I ++ VDHL + RGG IE+I IRN+ V P+ I+
Sbjct: 278 GGIRHIEVDHLTVMSAVPAGILFKSASTRGGTIEDIAIRNVITVGVATPVSIT 330
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 56/246 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPDCY- 44
+E S ++ + + L SPF T+H Y + P+TDG+D D
Sbjct: 173 IEFYQSQHVSL-AGLHLLRSPFWTVHICYSAYVHVDGITIRNNIGGRGPSTDGVDIDSSR 231
Query: 45 --------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
I + + +K+G D DG+ + +P +I +R + + IG E SG
Sbjct: 232 HVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVIRNCT-VRYGAAAFTIGSETSGG 290
Query: 97 IFNVTV------DHL------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDE 144
NV V +H+ + RGG +NI I + +++ V IPI I+ N
Sbjct: 291 FRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNIRIHDFQLDGVAIPIHITMNWNPSYSY 350
Query: 145 GRDP--------------KAIPKIRGISF---VNVFSVNTTKAPICMKNVSLLVLAPSVK 187
+ P K +P RG+ V+++++ T A +VS + AP V+
Sbjct: 351 AKIPHGLKHVPRYYRVLAKPVPPARGLPHFRNVHIWNIEATNAKRAF-DVSAMPAAPLVR 409
Query: 188 WQCQFV 193
++ +
Sbjct: 410 FKLDHI 415
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 18/63 (28%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDP----DC 43
+EL+NS N+LI S++ NSPF T+HPVYCS APNTDGIDP C
Sbjct: 228 IELVNSTNVLI-SSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAPNTDGIDPGLCASC 286
Query: 44 YIE 46
Y
Sbjct: 287 YFH 289
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
+ L+N N+ + + + F NSP IHP+ C S A N DG+D +
Sbjct: 230 ISLVNCKNVWL-NGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQNGDGLDLESCKNA 288
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG P N+ V + G +G EMSG +
Sbjct: 289 LIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCT-VFKGHGGFVVGSEMSGGVK 347
Query: 99 NVTV---DHLDTD--------KGRGGNIENIIIRNIKMERVKIPI 132
N+ V L TD +GRGG +ENI I N+ M ++ +
Sbjct: 348 NIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDV 392
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ + SPF TIH C + N DGID +C + G+
Sbjct: 202 ILLEDFHIRQSPFWTIHLYLCNSGVVRHLDVQAHGHNNDGIDLEMSRNFLIENCKFDQGD 261
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + PS NI VR ++G T +GIG E+SG + N+ +
Sbjct: 262 DAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTL----LGIGSEISGGVRNIYMTRCK 317
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
L T+ RGG IENI + +I+
Sbjct: 318 APQNVHRLFFLKTNHRRGGFIENIYLEDIE 347
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 33/147 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID C + G+
Sbjct: 216 VLLDGFKIRQSPFWTIHLYMCNSGVVRNLDVQAHGHNNDGIDFEMSRNFLVEHCTFDQGD 275
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
V +KSG + D + P NI VR + +GIG EMSG + N+ +
Sbjct: 276 DAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVL-LGIGSEMSGGVRNIYMHDCTVPE 334
Query: 105 -------LDTDKGRGGNIENIIIRNIK 124
L T+ RGG IENI + NI+
Sbjct: 335 SVQRLFFLKTNHRRGGFIENIYLENIE 361
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
++I + SPF +HPV C + PN DG DP+ C ++G+
Sbjct: 242 VLIEGVKLRRSPFWQVHPVLCRNVVVRGVDIHGLGPNNDGCDPESVDMMLIEQCTFDTGD 301
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDK 109
+AV SG + DG +A P+ NI +R GV +G ++SG ++ + D
Sbjct: 302 DCIAVNSGRNADGRRLAAPAQNIVIRDCR-MKEGHGGVVVGSQISGGARHIYAERCTMDS 360
Query: 110 G-------------RGGNIENIIIRNIKMERV 128
RGG +E+ R++ + +V
Sbjct: 361 PDLWYAIRFKNNALRGGLLEHFYFRDLTVGQV 392
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 34/170 (20%)
Query: 17 FCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIESGNGLVAV 54
F NSP +HP C + N DG+D D + G+ + +
Sbjct: 224 FRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLDLDSCRYANIYDSVFDVGDDAICI 283
Query: 55 KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD----------- 103
KSG D DG A+A P+ + +R G IG EMSG + N+ +
Sbjct: 284 KSGKDADGRALAVPTEYVTIRNCQ-VFHGHGGFVIGSEMSGDVRNIAITDCVFIGTDAGL 342
Query: 104 HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDPKAIPK 153
+ +GRGG +E I IR + M+ + I + DP A+ +
Sbjct: 343 RFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNTDDPVAVTE 392
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 278
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 279 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 334
Query: 104 ---------HLDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N+K
Sbjct: 335 APNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 278
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 279 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 334
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N+K
Sbjct: 335 APNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
N ++ + + CN+ IHP + S +PNTD +DP+
Sbjct: 220 FFNRCKLITVHGITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWI 279
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C G+ +A+KSG G +P+ N +R V +G EM+G + N+
Sbjct: 280 SGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGH-GAVTLGSEMAGGVRNL 338
Query: 101 TV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSN 139
TV DH D T +GRG + I+ ++ +KM V PI I+ N
Sbjct: 339 TVERCIFDHTDRGLRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVINMWYN 390
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YI 45
N +++ F NSP +HP+ C + N D +D +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
++G+ + +KSG D G P N+ V + G +G EMSG + N+ VD+
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI----------SRGSNGHPDE 144
+++GRGG +ENI I NI M + IP + RG + + DE
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDE 427
Query: 145 GRDPKAIPKIRGIS--FVNVFSVNTT 168
+ IP + + F N+F + T
Sbjct: 428 KKAETTIPPVTEETPIFRNIFIKDVT 453
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YI 45
N +++ F NSP +HP+ C + N D +D +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
++G+ + +KSG D G P N+ V + G +G EMSG + N+ VD+
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI----------SRGSNGHPDE 144
+++GRGG +ENI I NI M + IP + RG + + DE
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDE 427
Query: 145 GRDPKAIPKIRGIS--FVNVFSVNTT 168
+ IP + + F N+F + T
Sbjct: 428 KKAETTIPPVTEETPIFRNIFIKDVT 453
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 39/140 (27%)
Query: 25 IHPVYCSI------------APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGI 63
++ YCSI P+TDG+D D C I+ + + +KSG D DG+
Sbjct: 226 LYSDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTDGL 285
Query: 64 AMARPSSNIAVRRVSGTTPTCSGVGI---GREMSGRIFNV-----------TVDHLDTDK 109
+ RP+ N+ +R + T G G+ G E SG I N+ +V L +
Sbjct: 286 RVNRPTENVVIRNCT----TRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAM 341
Query: 110 GRGGNIENIIIRNIKMERVK 129
RGG IENI I +K + V+
Sbjct: 342 NRGGIIENIYITRVKADSVR 361
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YI 45
N +++ F NSP +HP+ C + N D +D +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
++G+ + +KSG D G P N+ V + G +G EMSG + N+ VD+
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI----------SRGSNGHPDE 144
+++GRGG +ENI I NI M + IP + RG + + DE
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDE 427
Query: 145 GRDPKAIPKIRGIS--FVNVFSVNTT 168
+ IP + + F N+F + T
Sbjct: 428 KKAETTIPPVTEETPIFRNIFIKDVT 453
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 34/155 (21%)
Query: 8 NILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDPD---------CYIES 47
N +++ + SPF +HP+ + S PN DG DP+ C +
Sbjct: 721 NRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDSHGPNNDGCDPESCENVLIESCDFNN 780
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ VA+KSG ++DG PS NI VR +GV +G E+SG ++V V
Sbjct: 781 GDDCVAIKSGKNNDGRTWNLPSRNIIVRNCI-MRDGHAGVAVGSEISGSCYDVWVRDCVM 839
Query: 104 ---------HLDTDKGRGGNIENIIIRNIKMERVK 129
+ ++ RGG ++ R+I++ K
Sbjct: 840 DSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECK 874
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 34/149 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIES 47
+++ + F NSPF +HP C + N DG+D + +
Sbjct: 226 VLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDGLDIESCQNVLVVQSTFDV 285
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ V +KSG + G P+ N+ V + G +G EMSG + ++ V +
Sbjct: 286 GDDAVCIKSGRNEAGRLRGMPAKNVVVEDCT-VFHGHGGFVVGSEMSGGVHSILVRNCKF 344
Query: 105 LDTDKG--------RGGNIENIIIRNIKM 125
L+TD G RGG++ +I I+N+ M
Sbjct: 345 LNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 34/155 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPD-------- 42
L+ +++ +L F S F + Y + P+TDGID D
Sbjct: 156 LLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVIIRNNDGPSTDGIDIDSSTNVRVY 215
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + G+ +A+KSG D +G + R SS I V R + GV IG E+S + +V
Sbjct: 216 ECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSEVSAGVSDVY 273
Query: 102 VDHLD-----------TDKGRGGNIENIIIRNIKM 125
+ +D + K RGG IENI + N+ M
Sbjct: 274 IHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YI 45
N +++ F NSP +HP+ C + N D +D +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
++G+ + +KSG D G P N+ V + G +G EMSG + N+ VD+
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI----------SRGSNGHPDE 144
+++GRGG +ENI I NI M + IP + RG + + DE
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDE 427
Query: 145 GRDPKAIPKIRGIS--FVNVFSVNTT 168
+ IP + + F N+F + T
Sbjct: 428 KKAETTIPPVTEETPIFRNIFIKDVT 453
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 35/158 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---- 43
V L+ N+ + + F NSP +HP+ C S A N DG+D +
Sbjct: 231 VSLIECRNVWL-QGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGDGLDLESCRNA 289
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D DG AR N+ V + G +G EMSG +
Sbjct: 290 LIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCT-VFKGHGGFVVGSEMSGGVR 348
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKM 125
NV+V + L TD +GRGG +ENI + N+ M
Sbjct: 349 NVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSM 386
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 48/194 (24%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPD----- 42
L N+ N+ + +L + F T+ +Y + P+TDGID D
Sbjct: 197 LQNAENVFL-KDLNIQRAGFWTVQVLYSNHITVDGLTIRNNIGGHGPSTDGIDIDSSKYI 255
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSG 95
C I+ + +K+G D DG+ + RP+ + +R ++G+ T IG E SG
Sbjct: 256 LVQNCDIDCNDDNFCLKAGRDWDGLRVDRPTEYVVIRDCIALAGSGLTT----IGSETSG 311
Query: 96 RIFNVTVDHLD---TDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSN----- 139
I +V V ++ T G RGG +E+I ++NIKM+ V +++S N
Sbjct: 312 DIRHVFVSNIQGKGTKTGLKIKSATNRGGTVEDIHMQNIKMDSVGTFMQVSMNWNPSYSY 371
Query: 140 GHPDEGRDPKAIPK 153
EG D +IPK
Sbjct: 372 SKLPEGYDYDSIPK 385
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 14 NLAFCNSPFRTIHP--VYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
NL C S + V + +TDGID D C + + + VKSG +
Sbjct: 173 NLHVCYSKQVNLQRLNVMNATGTSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+AR + +I +R T SG+ +G E SG I NV ++H + + + R
Sbjct: 233 QQLARTARDIIIRDC--TLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKI 134
GG I+NII+R++ ME V P +
Sbjct: 291 GGWIKNIIVRHLIMEDVGYPFML 313
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YI 45
N +++ F NSP +HP+ C + N D +D +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
++G+ + +KSG D G P N+ V + G +G EMSG + N+ VD+
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKI----------SRGSNGHPDE 144
+++GRGG +ENI I NI M + IP + RG + + DE
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINM--INIPNEALIFNLYYGGKGRGEDPNQDE 427
Query: 145 GRDPKAIPKIRGIS--FVNVFSVNTT 168
+ IP + + F N+F + T
Sbjct: 428 KKAETTIPPVTEETPIFRNIFIKDVT 453
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N+K
Sbjct: 334 APNSVMRLFFVKTNHRRGGFIENVYMKNVK 363
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 34/156 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID--------- 40
++N+ +++ + F NSP +HP+ C A N DGID
Sbjct: 250 VLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLV 309
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ + G+ + +KSG D G A P+ N+ +R + G IG EMSG N+
Sbjct: 310 ENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSGGARNI 368
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKM 125
V T +GRGG +ENI I I M
Sbjct: 369 WVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISM 404
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 36/161 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
++I + NSP TIHP+ APNTDG+DP+
Sbjct: 234 VLIEGITIRNSPSWTIHPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSV 293
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + PS N+ +R V IG EMSG + NV V++
Sbjct: 294 GDDCIAIKSGKLSVSQKLPMPSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCVF 352
Query: 105 --------LDTDKGRG--GNIENIIIRNIKMERVKIPIKIS 135
+ T +GRG G I+ I NIKME V P I+
Sbjct: 353 KKTDRGIRIKTRRGRGKTGIIDEIHAANIKMEGVLTPFTIN 393
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ + SPF TIH C + N DGID DC + G+
Sbjct: 212 VLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 271
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R + G T +GIG E+SG I NV +
Sbjct: 272 DAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTL----LGIGSEISGGIRNVYMHDCK 327
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG IENI + NI+ V+ ++I
Sbjct: 328 APQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEID 368
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 36/181 (19%)
Query: 22 FRTIHPVYCSIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNI 72
FR + + + NTDGIDP YI++G+ VA+KSG P ++
Sbjct: 180 FRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDL 233
Query: 73 AVRRVSGTTPTCS-----GVGIGREMSGRIFNVTVDHLD---TDKG--------RGGNIE 116
R + T C G+ IG E++G + NV + + TD+G RG +I
Sbjct: 234 PSRDI--TITDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIG 291
Query: 117 NIIIRNIKMERVKIPIKISRGSNGHPD---EGRDPKAIPKIRGISFVNVFSVNTTKAPIC 173
N + R+I ME VK I +S PD E + P I+ NV +V + A +
Sbjct: 292 NFVFRDITMENVKTAILLSEFYPKIPDTITEEPVTRLTPHFHDITIENVQAVGSRDAAVI 351
Query: 174 M 174
+
Sbjct: 352 V 352
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ + SPF TIH C + N DGID DC + G+
Sbjct: 212 VLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 271
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R + G T +GIG E+SG I NV +
Sbjct: 272 DAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTL----LGIGSEISGGIRNVYMHDCK 327
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG IENI + NI+ V+ ++I
Sbjct: 328 APQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEID 368
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 62/249 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD---------CYIESGN 49
+++ NSP ++PV C S N DG DP+ C ++G+
Sbjct: 202 VLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYSHGANNDGCDPESCNGVHIRNCRFDTGD 261
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+++KSG D DG P N+ + + G+ +G EMSG I V +
Sbjct: 262 DCISLKSGRDRDGRMAGIPCENVLIEN-NEFADGHGGIALGSEMSGGIRRVLAVNNRFSS 320
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP----DEGRDPKAIP 152
L T+ RGG +E++I+ + M+ V G+ H ++GR+ +P
Sbjct: 321 PNLTYALRLKTNARRGGRVEDVILADSVMDHVH-------GAAVHGTMLYEDGRNGSDLP 373
Query: 153 KIRGISFVN---------VFSVNTTKAPI---CMKNVSLLVLA---PSVKWQCQFVSG-- 195
+ I+ N +F + P+ ++N+ + +A S+ W+ V
Sbjct: 374 EFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARPMRSMNWKEPVVDDVV 433
Query: 196 FNGQVFPLP 204
NG+ FP P
Sbjct: 434 INGKSFPRP 442
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 42/157 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID +C + G+
Sbjct: 180 VLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSRNFLIENCVFDQGD 239
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + + + P NI +R + G T +GIG EMSG + NV + +
Sbjct: 240 DAVVIKAGRNQNAWRLNTPCENIVIRHCNILKGHTL----LGIGSEMSGGVRNVYMHNCT 295
Query: 105 ----------LDTDKGRGGNIENIIIRNI---KMERV 128
T+ RGG IENI ++N+ KM+RV
Sbjct: 296 APDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 332
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 34/149 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPDC---------YIES 47
+ + + F NSP IHP+ C S A N DG+D + +
Sbjct: 236 VYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGDGLDLESCKNVIVVNSSFDV 295
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG + DG P N+ V + G +G EMSG + N++V +
Sbjct: 296 GDDGICLKSGKNEDGRKRGMPCENVIVDNCT-VFKGHGGFVVGSEMSGGVRNISVTNCQF 354
Query: 105 LDTD--------KGRGGNIENIIIRNIKM 125
L TD +GRGG +ENI I NI M
Sbjct: 355 LGTDVGLRFKSNRGRGGVVENIFISNISM 383
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 38/189 (20%)
Query: 12 ISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIESGN 49
+ + F NSP +HP+ C A N D +D + ++G+
Sbjct: 193 LEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAGD 252
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+ +KSG + G P N+ ++ + G IG EMSG + N+ +
Sbjct: 253 DAICIKSGKNEAGRRRGVPCENVYIKN-NTVLHGHGGFVIGSEMSGGVKNIYISDCTFIG 311
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERV---KIPIKISRGSNGHPDEGRD-PKAIPKI 154
+ +GRGG +ENI I I M+ + I + + SNG P E D + P
Sbjct: 312 TDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEGTPVF 371
Query: 155 RGISFVNVF 163
R I N+
Sbjct: 372 RNIEMKNLL 380
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 34/156 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID--------- 40
++N+ +++ + F NSP +HP+ C A N DGID
Sbjct: 243 VLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLV 302
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ + G+ + +KSG D G A P+ N+ +R + G IG EMSG N+
Sbjct: 303 ENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSGGARNI 361
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKM 125
V T +GRGG +ENI I I M
Sbjct: 362 WVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISM 397
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 37/182 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V L N NI + L NSP T+HP Y +PNTDG+DP+
Sbjct: 226 VFLYNCKNIAM-QGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENV 284
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ VA+KSG + + +P+ NI +R S V IG E++ ++
Sbjct: 285 LILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVY 343
Query: 99 NVTVD-----------HLDTDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+V V + T +GRG ++NI NI M+ V +P + PD
Sbjct: 344 DVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPDGH 403
Query: 146 RD 147
D
Sbjct: 404 SD 405
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 37/162 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID----PDCYI 45
L N IL+ + F NSP +HP+ C A N DG+D + I
Sbjct: 231 LTNCKQILL-EGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGDGVDVESCKNVLI 289
Query: 46 ES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
E G+ + +KSG D G +P+ N+ +R + G +G EMSG N+
Sbjct: 290 EGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRN-NVVYHAHGGFVVGSEMSGGAKNI 348
Query: 101 TVD-----------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
V T +GRGG +E+I I NI M + IP
Sbjct: 349 WVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINM--IDIP 388
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ + SPF TIH C + N DGID DC + G+
Sbjct: 212 VLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 271
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R + G T +GIG E+SG I NV +
Sbjct: 272 DAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTL----LGIGSEISGGIRNVYMHDCK 327
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG +ENI + NI+ V+ ++I
Sbjct: 328 VPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEID 368
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 36/161 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
++I + NSP TIHP+ APNTDG+DP+
Sbjct: 234 VLIEGITIKNSPSWTIHPLMSQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSV 293
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ +A+KSG + PS N+ +R V IG EMSG + NV V++
Sbjct: 294 GDDCIAIKSGKLSVSQKLPMPSENLIIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCIF 352
Query: 105 --------LDTDKGRG--GNIENIIIRNIKMERVKIPIKIS 135
+ T +GRG G I+ I NI+ME V P I+
Sbjct: 353 RKTDRGIRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTIN 393
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ + SPF TIH C + N DGID DC + G+
Sbjct: 212 VLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 271
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R + G T +GIG E+SG I NV +
Sbjct: 272 DAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTL----LGIGSEISGGIRNVYMHDCK 327
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG +ENI + NI+ V+ ++I
Sbjct: 328 APQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEID 368
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 43/187 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPD--- 42
V + NS N+ I+ +L + F T+ +Y P+TDGID D
Sbjct: 198 VLIQNSKNV-IVRDLTLQRAGFWTVQILYSKHVTTDGLTIRNNIGGHGPSTDGIDIDSSS 256
Query: 43 ------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG---IGREM 93
C I+ + +K+G D DG+ + RP+ + ++ T G G +G E
Sbjct: 257 YILVQNCDIDCNDDNFCLKAGRDWDGLRVNRPTEYVVIKDC----KTGKGAGLLTVGSET 312
Query: 94 SGRIFNVTVDHLD---TDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
SG I ++ +++ TD G RGG IE+II N+KM+ V + IS N
Sbjct: 313 SGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIEDIIFDNMKMDSVGTFLSISMNWNPTY 372
Query: 143 DEGRDPK 149
+ PK
Sbjct: 373 SYSKLPK 379
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC--YIESGNGL--- 51
+++ N F NSP +H +YC A N DG+D + Y+E N
Sbjct: 222 VLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIESCSYVEVKNSTLDC 281
Query: 52 ----VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
+ +KSG D +G + S I + + G IG EMSG ++ V +
Sbjct: 282 GDDGICIKSGKDEEGRKAGKASQYIYIHD-NVVYKAHGGFVIGSEMSGGAHDIFVTNCSF 340
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
T +GRGG +ENI I+NI M +
Sbjct: 341 IGTDVGLRFKTQRGRGGVVENIYIKNISMRDI 372
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 14 NLAFCNSPFRTIHPVYCS--IAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
N+ C S T+ V S P+TDGID D C + + + +K+G +
Sbjct: 173 NVHLCYSRHITLDSVQISNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGR 111
+ AR + +I +R T + SG+ +G E SG I V ++H + + + R
Sbjct: 233 ASKARSARDIVIRDC--TPNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKI 134
GG I +I +R++++ V+ P+ I
Sbjct: 291 GGFIRDIKVRHLQLVDVRFPVMI 313
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 47/215 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
V ++S N+ + + NS TIHP++ APNTDGIDP+
Sbjct: 225 VAAVDSENV-CLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYI 283
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+K+ G+ + R + +R G+ IG EMSG +
Sbjct: 284 RIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVK 342
Query: 99 NVTV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPD-- 143
++ V DH D T +GRG I+ ++ RN++M VK P I+ PD
Sbjct: 343 DMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGH 402
Query: 144 ----EGRDP----KAIPKIRGISFVNVFSVNTTKA 170
+ R+P + PK+ ++ N+ + + A
Sbjct: 403 GPYVQCREPLPVDEYTPKLGSLTMENIVATDAQFA 437
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DG+D +C + G+
Sbjct: 221 VLLDQFKIRESPFWTIHLYLCDGGIVRNLDVRAHGHNNDGVDLEMSRNFLVENCKFDQGD 280
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG EMSG I NV +
Sbjct: 281 DAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTL----LGIGSEMSGGIRNVYMHDCA 336
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
T+ RGG IENI + N+K +++ ++I
Sbjct: 337 APDSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRILEID 377
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGDNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N++
Sbjct: 334 APNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 47/184 (25%)
Query: 19 NSPFRTIHPVYCS---------IAP-------NTDGIDPDCYIESGNGLVAVKSGWDHDG 62
+SPF T+ P Y AP NTDG++ + Y+ + + V +KSG D G
Sbjct: 564 DSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGVE-NVYVNNSDDGVCMKSGLDGFG 622
Query: 63 IAMARPSSNIAVRRVSGTTPTCS---------GVGIGREMSGRIFNVTVD---------- 103
I +A P+ ++ VR + TC G +G EMSG + NVT
Sbjct: 623 INLAIPTEDVLVRNI-----TCGDRRDDAGRGGFAVGSEMSGGVRNVTFRDSVLGAGPQS 677
Query: 104 ---HLDTDKGRGGNIENIIIRNIKMER--VKIPIKISRGSNGHPDEGRDPKAIPKIRGIS 158
+ T GRGG I ++ NI+ K + + PD D +P I +
Sbjct: 678 RGIDVKTSVGRGGYIIDVTFENIRAPSPFPKANVNVHSALRDDPDVPGD-DLVPVIGNLR 736
Query: 159 FVNV 162
F NV
Sbjct: 737 FANV 740
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 34/148 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD----CYIES-----GN 49
+++ ++ +SPF IHPV+C S N DG DP+ IE+ G+
Sbjct: 213 VLVEDVRIFDSPFWIIHPVFCNNVTVRNIYIDSNNYNNDGCDPESCTNVLIENMDFNVGD 272
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
+A+KSG D DG + + + N+ +R + IG E SG + NV ++
Sbjct: 273 DGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSETSGGVRNVYIEDCKIDS 329
Query: 104 -----HLDTDKGRGGNIENIIIRNIKME 126
+ ++ RGG EN+ +R I+ +
Sbjct: 330 CRNGIYFKSNLDRGGYFENLNMRRIEAD 357
>gi|445494991|ref|ZP_21462035.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791152|gb|ELX12699.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 868
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 41/159 (25%)
Query: 31 SIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
+ A NTDGIDP +I +G+ VA+K+G + P+ NI++ +
Sbjct: 218 ATARNTDGIDPISSRNITIAYSHIRTGDDNVAIKAG-------SSGPTENISI--LHNHF 268
Query: 82 PTCSGVGIGREMSGRIFNVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKI 130
+ G+ IG E +G + V VD L+ +D RGG ++ + RN+ + VK
Sbjct: 269 YSGHGMSIGSETNGGVRRVLVDDLNMDGTTSGLRIKSDVSRGGVVDQVSYRNVCLRDVKT 328
Query: 131 PIKISRGSNGHPDEGRDPKA----IPKIRGISFVNVFSV 165
PI IS N P+A IP I+F V SV
Sbjct: 329 PIDISTRYN--------PRAEGALIPVYTNIAFDGVHSV 359
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGDNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N++
Sbjct: 334 APNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 104 ---------HLDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N++
Sbjct: 334 APNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVD--- 103
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 104 ---------HLDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N++
Sbjct: 334 APNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 210 VMLDGFKIRESPFWTIHLYMCDGGMVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGD 269
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 270 DAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIGSEISGGIRNIYMHDCT 325
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IENI ++N++
Sbjct: 326 APNSVMRLFFVKTNHRRGGFIENIYMKNVE 355
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD------- 42
+N ++I + NSP TIHP+ APNTDG+DP+
Sbjct: 227 FLNKCKNVLIEGITIKNSPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVI 286
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
G+ +A+KSG + S N+ +R V IG EMSG + NV
Sbjct: 287 LGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNV 345
Query: 101 TVD-----------HLDTDKGRG--GNIENIIIRNIKMERVKIPIKIS 135
VD + T +GRG G I+ I NIKM++V P I+
Sbjct: 346 HVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTIN 393
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 27/135 (20%)
Query: 17 FCNSPFRTIHPVYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMAR 67
+C TI+ P+TDGID D C ++ + + +KSG D DG+ + R
Sbjct: 231 YCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNR 290
Query: 68 PSSNIAVRRVSGTTPTCSGVGI---GREMSGRIFNV-----------TVDHLDTDKGRGG 113
P+ N+ VR + G G+ G E SG I N+ TV L + RGG
Sbjct: 291 PTENVVVRNCTAR----KGAGLITCGSETSGSIRNILGYDLKAVGTSTVLRLKSAMNRGG 346
Query: 114 NIENIIIRNIKMERV 128
IENI + + E +
Sbjct: 347 TIENIYMTRVSAENI 361
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 47/193 (24%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPD----- 42
L++ + + + +L + F T+H +Y P+TDGID D
Sbjct: 228 LISDSKNIALKDLNIQKAGFWTVHVLYSEKITVDGLIIKNNIGGHGPSTDGIDIDSSKWV 287
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGI---GREMSG 95
C I+ + +K+G D DG + RP+ + +R G G+ G E +G
Sbjct: 288 LIQNCDIDCNDDNFCLKAGRDWDGQRVNRPTEYVVIRNCIAR----KGAGLFTLGSETAG 343
Query: 96 RIFNVTVDH---LDTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSN----- 139
I +V V + L T G RGG +E+I ++NI+M+ VK +KIS N
Sbjct: 344 SIRHVYVSNIKGLGTSNGLNIKSALTRGGTVEDISLQNIQMDSVKTFVKISMNWNPSYSY 403
Query: 140 GHPDEGRDPKAIP 152
EG D +IP
Sbjct: 404 SKLPEGYDIDSIP 416
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD------- 42
+N ++I + NSP TIHP+ APNTDG+DP+
Sbjct: 227 FLNKCKNVLIEGITIKNSPSWTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVI 286
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
G+ +A+KSG + S N+ +R V IG EMSG + NV
Sbjct: 287 LGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCL-MEYGHGAVVIGSEMSGGVKNV 345
Query: 101 TVD-----------HLDTDKGRG--GNIENIIIRNIKMERVKIPIKIS 135
VD + T +GRG G I+ I NIKM++V P I+
Sbjct: 346 HVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTIN 393
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 29/132 (21%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ +R +
Sbjct: 245 PSTDGIDIDSSTNILVENCEVDCNDDNICIKAGRDADGLRVNRPTENVVIRNCTAR---- 300
Query: 85 SGVGI---GREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVKI 130
G G+ G E SG I NV L + RGG +ENI + +K + VK
Sbjct: 301 KGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVENIYMTRVKADSVKY 360
Query: 131 PIKISRGSNGHP 142
+ + G N +P
Sbjct: 361 VLAV--GLNWNP 370
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 217 VLLDGFKIRESPFWTIHIYMCDGGIARNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 276
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R V G T +GIG E+SG I NV +
Sbjct: 277 DAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTL----LGIGSEISGGIRNVYMHDCK 332
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG +ENI + NI+ V+ ++I
Sbjct: 333 VPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEID 373
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPDCY- 44
+++ NS I + L + F T+ VY + P+TDGID D
Sbjct: 220 IQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNSDGKGPSTDGIDIDSSH 279
Query: 45 --------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
I+ + + +K+G D DG+ + RP+ ++ +R S +GV G E SG
Sbjct: 280 HVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRD-SIIRHAEAGVTFGSETSGS 338
Query: 97 IFNVTVDHLDTD------------KGRGGNIENIIIRNIKMERVKIPIKI 134
I N+ V +LD RGG + +I IR++K++ + +++
Sbjct: 339 IRNIDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEAAVRV 388
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 39/161 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 217 VLLDGFKIRESPFWTIHIYMCNGGIARNLDVKAHGHNNDGIDLEMTRNFLVEDCTFDQGD 276
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P+ NI +R V G T +GIG E+SG I NV +
Sbjct: 277 DAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTL----LGIGSEISGGIRNVYMHDCK 332
Query: 105 ----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
+ T+ RG +ENI + NI+ V+ ++I
Sbjct: 333 VPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEID 373
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 14 NLAFCNSPFRTIHPVYCS--IAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
N+ C S + V S P+TDGID D C + + + +KSG ++
Sbjct: 173 NMHLCYSRHIEVEGVQISNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYEA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------HLDTDKGR 111
AR + +I +R T SG+ +G E SG I V ++ + + + R
Sbjct: 233 AQKARTARDIVIR--GCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKIS 135
GG I +II++N+++ V+ P+ I
Sbjct: 291 GGFIRDIIVQNLRLTDVRFPVLIQ 314
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIH------------PVYCS-IAPNTDGID---------PDCYIES 47
+++ + F NSP +H V C A N DGID D + +
Sbjct: 239 VLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIESCTNLLLTDSWFDV 298
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D +G P+SNI V G +G EMSG + N+ V +
Sbjct: 299 GDDAICIKSGKDEEGRRRGIPASNIIVDNCV-CYHGHGGFVVGSEMSGGVKNIAVSNCRF 357
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
+ +GRGG +ENI I+NI M +
Sbjct: 358 SGTDVGLRFKSKRGRGGVVENIYIKNIMMNDI 389
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 39/149 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 218 VMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGD 277
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 278 DAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIGSEISGGIRNIYMHDCT 333
Query: 105 ----------LDTDKGRGGNIENIIIRNI 123
+ T+ RGG IENI ++N+
Sbjct: 334 APYSVMRLFFVKTNHRRGGFIENIYMKNV 362
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 35/167 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDPD------ 42
V + S NIL+ + C S F +H Y S P+TDGID D
Sbjct: 151 VLVYESKNILL-KDFTSCESGFWNVHLCYSRDVAVENLSIINSAGPSTDGIDIDSCEQVR 209
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C + + + +K+G + AR + I +R SG+ +G E SG I +
Sbjct: 210 IERCTVSCNDDNICIKAGRGREAAPKARTARAIVIREC--VLNKGSGITLGSETSGGIEH 267
Query: 100 VTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V +++ + + + RGG I +I +RN+ ++ V+ P+ I
Sbjct: 268 VLIENNRFNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLIQ 314
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 39/149 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 220 VMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGD 279
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 280 DAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIGSEISGGIRNIYMHDCT 335
Query: 105 ----------LDTDKGRGGNIENIIIRNI 123
+ T+ RGG IENI ++N+
Sbjct: 336 APNSVMRLFFVKTNHRRGGFIENIYMKNV 364
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 203 VLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNGDALDLESCTNALVINNVFDA 262
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 263 GDDAICIKSGKDEDGRKRGEPCQNVIVKN-NVVLHGHGGFVVGSEMSGGVKNIYVSDCTF 321
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +ENI I NI M + IP
Sbjct: 322 LGTDVGLRFKSTRGRGGVVENIHIHNINM--IDIP 354
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 38/183 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V +++S NI + + NS TIHP++ APNTDGIDP+
Sbjct: 225 VAMVDSENI-CLHGITVQNSYSWTIHPIFVKHLDLLSFNINNPYNAPNTDGIDPESCEYT 283
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+K+ G+ + + + +R G+ IG EMSG +
Sbjct: 284 RIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVK 342
Query: 99 NVTV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
++ V DH D T +GRG I+ ++ RN++M VK P I+ PD G
Sbjct: 343 DMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-G 401
Query: 146 RDP 148
P
Sbjct: 402 HSP 404
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPI 132
GV +G E+SG I NVT+ + RGG +ENI +I ++ +
Sbjct: 938 GGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIF 997
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
I+ P + +R I F N+
Sbjct: 998 DINMEWRMVPPLSPAHYPLTSLRNIHFKNI 1027
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 39/149 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N DGID DC + G+
Sbjct: 207 VMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGD 266
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 267 DAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGIGSEISGGIRNIYMHDCT 322
Query: 105 ----------LDTDKGRGGNIENIIIRNI 123
+ T+ RGG IENI ++N+
Sbjct: 323 APNSVMRLFFVKTNHRRGGFIENIYMKNV 351
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
L++ + F NSP ++P+ C + N DG+D +C +
Sbjct: 247 LLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLESCRIGTVTNCRFDV 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL-- 105
G+ + +KSG D +G +P+ ++ G IG EMSG + N+ + +L
Sbjct: 307 GDDAICIKSGKDQEGRERGKPTELFVIKDCV-VYHGHGGFVIGSEMSGGVRNLFIKNLTF 365
Query: 106 ---------DTDKGRGGNIENIIIRNIKMERV 128
+ +GRGG +ENI + +I+M +
Sbjct: 366 IGTDCGLRFKSTRGRGGLVENIWMEDIRMSDI 397
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ F NSP +HP C N DG+D DC +
Sbjct: 218 VLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLDSCRYGLVEDCSFDV 277
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G A+ P +I +R G IG EMSG + + V+
Sbjct: 278 GDDAICIKSGKDEAGRALGIPCEDILIRNCR-VYHGHGGFVIGSEMSGGVRRLRVEDCTF 336
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERV 128
+ TD +GRGG +E+I I I+M +
Sbjct: 337 MGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI 368
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
V L+ NIL+ + F NSP IHP+ + N DGID
Sbjct: 171 VNLVKCKNILL-EGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNV 229
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC + G+ + +KSG + G P+ N+ + G IG EMSG +
Sbjct: 230 VIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCI-VYHGHGGFTIGSEMSGGVR 288
Query: 99 NVTV---DHLDTD--------KGRGGNIENIIIRNIKMERV 128
N+ V + + TD +GRGG +ENI I NI M+ +
Sbjct: 289 NIKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDI 329
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
Length = 1095
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNI 123
GV +G E+SG I NVT+ + RGG +ENI +I
Sbjct: 938 GGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
Length = 1095
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNI 123
GV +G E+SG I NVT+ + RGG +ENI +I
Sbjct: 938 GGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNI 123
GV +G E+SG I NVT+ + RGG +ENI +I
Sbjct: 938 GGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 39/140 (27%)
Query: 20 SPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGNGLVAVKSGWD 59
SPF TIH ++ N DGID DC E G+ V +KSG +
Sbjct: 230 SPFWTIHMYLVDGGIARNLNVKAMGHNNDGIDLEMTRNFLIEDCVFEQGDDAVVIKSGRN 289
Query: 60 HDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH------------ 104
D + P+ NI VR ++G T +G+G E+SG + N+ +
Sbjct: 290 QDAWRLNTPTENIVVRNCLVLAGQTL----LGVGSEISGGVRNIYMHDCEAPNNVHRLFF 345
Query: 105 LDTDKGRGGNIENIIIRNIK 124
+ T+ RG +EN+ + IK
Sbjct: 346 IKTNHRRGAFVENVYMEKIK 365
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNI 123
GV +G E+SG I NVT+ + RGG +ENI +I
Sbjct: 938 GGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNIKME 126
GV +G E+SG I NVT+ + RGG +ENI +I ++
Sbjct: 938 GGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIK 991
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 879 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GH 937
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNIKME 126
GV +G E+SG I NVT+ + RGG +ENI +I ++
Sbjct: 938 GGVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIK 991
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 41/143 (28%)
Query: 23 RTIHPVYCSI------------APNTDGIDPD---------CYIESGNGLVAVKSGWDHD 61
+ ++ YC+I P+TDGID D C ++ + + +KSG D D
Sbjct: 230 QVLYSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDAD 289
Query: 62 GIAMARPSSNIAVR----RVSGTTPTCSGVGIGREMSGRIFNV-----------TVDHLD 106
G+ + P+ NI +R R TC G E SG I N+ V L
Sbjct: 290 GLRVNLPTENIVIRNCIARKGAGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLK 344
Query: 107 TDKGRGGNIENIIIRNIKMERVK 129
+ RGG IENI + ++K E V+
Sbjct: 345 SAMNRGGTIENIYMTDVKAENVR 367
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 41/143 (28%)
Query: 23 RTIHPVYCSI------------APNTDGIDPD---------CYIESGNGLVAVKSGWDHD 61
+ ++ YC+I P+TDGID D C ++ + + +KSG D D
Sbjct: 230 QVLYSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDAD 289
Query: 62 GIAMARPSSNIAVR----RVSGTTPTCSGVGIGREMSGRIFNV-----------TVDHLD 106
G+ + P+ NI +R R TC G E SG I N+ V L
Sbjct: 290 GLRVNLPTENIVIRNCIARKGAGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLK 344
Query: 107 TDKGRGGNIENIIIRNIKMERVK 129
+ RGG IENI + ++K E V+
Sbjct: 345 SAMNRGGTIENIYMTDVKAENVR 367
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 41/179 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCKNALIINNIFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + NV V
Sbjct: 309 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNVYVTDCTF 367
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP-----IKISRGSNGHPDEGRDPKA 150
L TD +GRGG +E I I NI M + IP + G G +E D A
Sbjct: 368 LGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIPHEALLFDLFYGGKGAGEETEDDLA 424
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCKNALIINNIFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + NV V
Sbjct: 309 GDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNVYVTDCTF 367
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 368 LGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 43/193 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDPD--- 42
+++ +S+N+ + + S F T+H Y P+TDGID D
Sbjct: 162 IQVFDSSNVKLDGPM-LTRSGFWTVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSH 220
Query: 43 ------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
I+ + + +K+G D DG+ + RP+ N+ +R S + V G E SG
Sbjct: 221 DVLVQHADIDVNDDALCLKAGRDSDGLRVNRPTYNVVLRD-SLIRTGAAAVTFGSETSGG 279
Query: 97 IFNVTVDHLDTDKG------------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPD- 143
N+ +L +G RGG EN+ + ++ ++ VK PIK++ N
Sbjct: 280 FRNIEAYNLTALRGVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKVTLNWNPAYSY 339
Query: 144 ----EGRDPKAIP 152
G DPK +P
Sbjct: 340 TSLPAGTDPKTVP 352
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 33/151 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGID---------PDCYIESGN 49
+++ + NSPF H VY S A N DG+D D + +G+
Sbjct: 229 VLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYNNDGLDIESSQFVLAEDNHFRTGD 288
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG---RIF---NVTVD 103
+ +KSG D DG + PS++I R + G+G+G EMSG R+F NV +
Sbjct: 289 DGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGIKRVFFENNVLQE 346
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVK 129
++ RGG +E I IR K+ K
Sbjct: 347 GDSAYRFKSNLDRGGRVEMIRIRGSKVASFK 377
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 39/150 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGN 49
+++ SPF TIH C + N D ID DC + G+
Sbjct: 219 VLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDDIDFEMSRNFLVEDCSFDQGD 278
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH-- 104
V +K+G + D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 279 DAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCT 334
Query: 105 ----------LDTDKGRGGNIENIIIRNIK 124
+ T+ RGG IEN+ ++N+K
Sbjct: 335 APNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 247 VLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNALIINNIFDA 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 307 GDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVTDCTF 365
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 366 LGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV +V L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVS 357
Query: 130 IPIKISRGSNGHP 142
+++ N HP
Sbjct: 358 NVLEVDL--NWHP 368
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 56/194 (28%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+P T+HP C +PNTDG +P+ G+ +AVK+
Sbjct: 246 NAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 305
Query: 57 G-----WDHDGIAMARPSS--NIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
G + D +A R S + + R G G+ IG EMSG + NVTV+
Sbjct: 306 GKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVIGSEMSGGVHNVTVEDCDMVG 359
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI- 151
L T +GRGG++ N+ +R + ++ V+ + + ++GH + RDP +
Sbjct: 360 TDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALSANAHYHCDADGHDGWVQSRDPAPVD 419
Query: 152 ---PKIRGISFVNV 162
P I GI+ +V
Sbjct: 420 YGTPFIDGITVEDV 433
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 40/180 (22%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGN 49
+ N+ NSP T+HP Y S +PNTDG+DP+ I G+
Sbjct: 234 VQNVRVQNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGD 293
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+A+KSG + + + + NI +R S V +G E++G + NV V
Sbjct: 294 DCMAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGS-VTVGSEVAGGVKNVRVTQCIFDG 352
Query: 105 ------LDTDKGRGGN--IENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDPKAIP 152
+ T +GRG +++I+ NI M V +P ++ +GH D ++ + P
Sbjct: 353 TDRGLRIKTRRGRGERSVLDDILFENIDMNGVHMPFTVNMFYFCDPDGHTDYVQNQEPAP 412
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV +V L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVS 357
Query: 130 IPIKISRGSNGHP 142
+++ N HP
Sbjct: 358 NVLEVDL--NWHP 368
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV +V L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVS 357
Query: 130 IPIKISRGSNGHP 142
+++ N HP
Sbjct: 358 NVLEVDL--NWHP 368
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 41/176 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCKNALIVNNIFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + NV V
Sbjct: 309 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNVYVTDCTF 367
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP-----IKISRGSNGHPDEGRD 147
L TD +GRGG +E I I NI M + IP + G G +E D
Sbjct: 368 LGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIPHEALLFDLFYGGKGAGEETED 421
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 33/139 (23%)
Query: 19 NSPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGNGLVAVKSGW 58
NSPF H VY S PN DG+D + +G+ V +KSG
Sbjct: 231 NSPFWVNHLVYADEVVVRGITVDSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGR 290
Query: 59 DHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDTDKG-------- 110
D DG + RPS+ + VR G+ +G EMSG + +V KG
Sbjct: 291 DLDGRRIGRPSAWVLVR--GNDMGGEDGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKA 348
Query: 111 ---RGGNIENIIIRNIKME 126
RGG +E + +RN+ +E
Sbjct: 349 NLDRGGTVERVRVRNMTVE 367
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 44/157 (28%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIES 47
+++S F NSP +H + C A N D ID + ++
Sbjct: 235 ILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAIDVESCRNVLVENSTFDA 294
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVR-----RVSGTTPTCSGVGIGREMSGRIFNVTV 102
G+ + +KSG D +G P+ N+ +R R G G IG EMSG N+ V
Sbjct: 295 GDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHG------GFVIGSEMSGGARNIFV 348
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIKMERV 128
T +GRGG +ENI I+NI M +
Sbjct: 349 SDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDI 385
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 265 VLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNALIINNIFDA 324
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 325 GDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVTDCTF 383
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 384 LGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 416
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 247 VLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDLESCKNALIINNIFDA 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 307 GDDAICIKSGKDEDGRRRGEPCQNVVVKD-NTVLHGHGGFVVGSEMSGGVKNIYVSDCTF 365
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 366 LGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 42/153 (27%)
Query: 12 ISNLAFCNSPFRTIHPVYCSI-------------APNTDGID---------PDCYIESGN 49
I N+ NSP T+ P YC+ +P T+G+ D +I +G+
Sbjct: 349 IENIVLTNSPHFTVRPQYCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGD 408
Query: 50 --GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLDT 107
VA+KSG D+ G PS NI V V T + +G EMSG + N+ +
Sbjct: 409 KEDAVAIKSGKDYHGRKANVPSKNIRVEHV--TILGGHALSVGSEMSGGVSNIIFSDITF 466
Query: 108 D----------------KGRGGNIENIIIRNIK 124
D +GRGG ++ I +NI+
Sbjct: 467 DGRNNKFGVGSARVKTMRGRGGVVDQITFQNIR 499
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 247 VLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNALIINNIFDA 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV---DH 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 307 GDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVADCTF 365
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 366 LGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 247 VLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNALIINNIFDA 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV---DH 104
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V
Sbjct: 307 GDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVADCTF 365
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIP 131
L TD +GRGG +E I I NI M + IP
Sbjct: 366 LGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGID---------PDCYIESGN 49
+++ + NSPF H VY S A N DG+D D + +G+
Sbjct: 229 VLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYNNDGLDIESSQFVLAEDNHFRTGD 288
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI----FNVTVDH- 104
+ +KSG D DG + PS++I R + G+G+G EMSG I F V H
Sbjct: 289 DGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGIKRVFFENNVLHE 346
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVK 129
++ RGG +E + IR K+ K
Sbjct: 347 GDSAYRFKSNLDRGGRVEMVRIRGSKVASFK 377
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 17 FCNSPFRTIHPVYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMAR 67
+C TI+ P+TDGID D C ++ + + +KSG D DG+ +
Sbjct: 236 YCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNL 295
Query: 68 PSSNIAVR----RVSGTTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRG 112
P+ N+ +R R TC G E SG I NV V L + RG
Sbjct: 296 PTENVVIRNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRG 350
Query: 113 GNIENIIIRNIKMERVK 129
G IENI + +K E V+
Sbjct: 351 GTIENIYMTEVKAENVR 367
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGID---------PDCYIESGN 49
+++ + NSPF H VY S A N DG+D D + +G+
Sbjct: 229 VLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYNNDGLDIESSQFVLAEDNHFRTGD 288
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI----FNVTVDH- 104
+ +KSG D DG + PS++I R + G+G+G EMSG I F V H
Sbjct: 289 DGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGIKRVFFENNVLHE 346
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVK 129
++ RGG +E + IR K+ K
Sbjct: 347 GDSAYRFKSNLDRGGRVEMVRIRGSKVASFK 377
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 41/143 (28%)
Query: 23 RTIHPVYCSI------------APNTDGIDPD---------CYIESGNGLVAVKSGWDHD 61
+ ++ YC+I P+TDGID D C ++ + + +KSG D D
Sbjct: 230 QVLYSNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDAD 289
Query: 62 GIAMARPSSNIAVR----RVSGTTPTCSGVGIGREMSGRIFNV-----------TVDHLD 106
G+ + P+ N+ +R R TC G E SG I N+ V L
Sbjct: 290 GLRVNLPTENVVIRNCIARKGAGLITC-----GSETSGSIRNILGYNLQAVGTSAVLRLK 344
Query: 107 TDKGRGGNIENIIIRNIKMERVK 129
+ RGG IENI + ++K E V+
Sbjct: 345 SAMNRGGTIENIYMTDVKAENVR 367
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 49/216 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPDC---- 43
V ++S N+ + + NS TIHP++ APNTDGIDP+
Sbjct: 225 VAAVDSENV-CLHGITVQNSFSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYI 283
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+K+ G+ + R + +R G+ IG EMSG +
Sbjct: 284 RIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVK 342
Query: 99 NVTV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
++ V DH D T +GRG I+ ++ RN++M VK P I+ PD G
Sbjct: 343 DMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-G 401
Query: 146 RDP-----------KAIPKIRGISFVNVFSVNTTKA 170
P + PK+ ++ N+ + + A
Sbjct: 402 HGPYVQCREAMPVDEYTPKLGSLTMENIVATDAQFA 437
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 34/158 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDCY---------IES 47
+ +S + NSP TIHPV C ++PNTDG++P+ I
Sbjct: 232 VTLSGITVRNSPSWTIHPVLCEHVLAVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISV 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ +A+K+G RP+ + +R V +G EMS I +V++
Sbjct: 292 GDDCIAIKAGKRDPRGGPDRPTRRVEIRNCL-MQLGHGAVVMGSEMSRGIHDVSISRCHF 350
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIKI 134
+ T +GRGG + +I + +M+ V PI +
Sbjct: 351 VGTDRGLRIKTRRGRGGAVSDIHLSQCRMDGVATPIAV 388
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 17 FCNSPFRTIHPVYCSIAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMAR 67
+C TI+ P+TDGID D C ++ + + +KSG D DG+ +
Sbjct: 236 YCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNL 295
Query: 68 PSSNIAVR----RVSGTTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRG 112
P+ N+ +R R TC G E SG I NV V L + RG
Sbjct: 296 PTENVVIRNCIARKGAGLITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRG 350
Query: 113 GNIENIIIRNIKMERVK 129
G IENI + +K E V+
Sbjct: 351 GTIENIYMTEVKAENVR 367
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDPD-------- 42
+ S NIL+ + S F IH Y S P+TDGID D
Sbjct: 153 VFESQNILL-RDFTSRESGFWNIHLCYSRRIAVEAVQISNSAGPSTDGIDVDSCEQVRIE 211
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
C + + + +KSG + AR + +I +R T SG+ +G E SG I V
Sbjct: 212 RCIVSCNDDNICIKSGRGREAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGIERVL 269
Query: 102 VD-----------HLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
++ + + + RGG I +I ++N+++ V+ P+ I
Sbjct: 270 IEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLIQ 314
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +KSG D DG+ + P+ N+ +R R
Sbjct: 253 PSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG 312
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV V L + RGG IENI + +K E V+
Sbjct: 313 LITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|170695826|ref|ZP_02886967.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
gi|170139250|gb|EDT07437.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
Length = 667
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 47/179 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N A N+PF HP C SI PN DG DPD
Sbjct: 341 VEFIGCTNVLM-ENYATNNTPFWQHHPTDCKNVVIRGVTTNSIGPNNDGFDPDACDNVLC 399
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D D P+ N ++ + + G+ +G EM G + N+
Sbjct: 400 DGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNS-GHGGITLGSEMGGGVQNI 456
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
+L T+ RGG ++N +++V +P ++ G+
Sbjct: 457 YARNLQMLNQNWATNPLNIAIRIKTNMNRGG-----FVKNFYVDKVTLPNGVALKGGGY 510
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +KSG D DG+ + P+ N+ +R R
Sbjct: 253 PSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG 312
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV V L + RGG IENI + +K E V+
Sbjct: 313 LITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 37/178 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V ++S NI + + NS TIHP++ APNTDGIDP+
Sbjct: 217 VAAVDSENI-CLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYI 275
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+K+ G+ + + + +R G+ IG EMSG +
Sbjct: 276 RIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVK 334
Query: 99 NVTV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPD 143
++ V DH D T +GRG I+ ++ RN++M VK P I+ PD
Sbjct: 335 DMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD 392
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P++DGID D IE+ + +++KSG D DG + RPS NI +
Sbjct: 262 PSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCH-FAYGH 320
Query: 85 SGVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNI 123
GV +G E+SG I NVT+ + RGG +ENI +I
Sbjct: 321 GGVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 371
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI------------APNTDGIDPDC----- 43
V S NI I + SP IH +Y S + N DGI D
Sbjct: 219 VVFWKSKNIFI-EGITLRESPMWNIHLIYSSHIVVRDITINSVESHNGDGIVLDSSSDAL 277
Query: 44 ----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG--TTPTCSGVGIGREMSGRI 97
++ +G+ + +KSG++ +G+ + P+ N+ +R GV G E SG I
Sbjct: 278 LEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGGVVFGSETSGGI 337
Query: 98 FNVTVD-----------HLDTDKGRGGNIENIIIRNIKMERVK 129
N+ V T +GRG ENIII +++M+ ++
Sbjct: 338 RNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIR 380
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 50/222 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
V L++ NIL+ F NSP IHP+ A N DG+D +
Sbjct: 225 VSLVDCENILL-DGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCENV 283
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG + DG P+ N+ ++ + G +G EMSG +
Sbjct: 284 LVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKN-NTVYHGHGGFVVGSEMSGGVS 342
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI-PIKISRGSNGH-PD-- 143
+ + H + +GRGG +E I I +I M +K I+ + G PD
Sbjct: 343 KIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQAPDLS 402
Query: 144 -------EGRDPKAI----PKIRGISFVNVFSVNTTKAPICM 174
E RD + P + I ++ SV K+ M
Sbjct: 403 NDLAENTEDRDVPEVTIETPSFKDIYISDITSVKAHKSGFFM 444
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V ++S N+ + + NS TIHP++ APNTDGIDP+
Sbjct: 225 VAAVDSENV-CLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESCEYI 283
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+K+ G+ + + + +R G+ IG EMSG +
Sbjct: 284 RIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVK 342
Query: 99 NVTV-----DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
++ V DH D T +GRG I+ ++ RN++M VK P I+ PD G
Sbjct: 343 DMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPD-G 401
Query: 146 RDP 148
P
Sbjct: 402 HSP 404
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 48/215 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDPDCY----- 44
V+ + NI I ++ N+PF IH + Y + N DGIDP+
Sbjct: 207 VQFFDCKNI-TIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLVNNDGIDPEYTRNLLI 265
Query: 45 --IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
IE NG VA+K G D+DG + PS NI +R GV +G EMS I +V
Sbjct: 266 ENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEMSSGIQHV 323
Query: 101 TVDH------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
V++ + T+ RGG I +I + N + V+ ++ G EG D
Sbjct: 324 FVENCTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAG---EGMDN 380
Query: 149 KAIPKIRGISFVNVFSVNTTKAPICMK-NVSLLVL 182
++ I K C K NV+ LVL
Sbjct: 381 HHFTEVHDI---------YVKDLKCKKVNVAALVL 406
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +KSG D DG+ + P+ N+ +R R
Sbjct: 237 PSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG 296
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I NV V L + RGG IENI + +K E V+
Sbjct: 297 LITC-----GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 351
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 249 ILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P NI VR + G IG EMSG + NV V
Sbjct: 309 GDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 367
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 368 IGTDVGLRFKSARGRGGVVE 387
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 243 ILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 302
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P NI VR + G IG EMSG + NV V
Sbjct: 303 GDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 361
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 362 IGTDVGLRFKSARGRGGVVE 381
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 47/197 (23%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY--------CSIAP----NTDGIDPDC----- 43
V L N N+ I S L +SP + +Y C+ N DG DPD
Sbjct: 278 VNLSNCQNVWI-SGLTLKDSPSWILQMIYSDNIVTDHCAFHSEGIWNGDGWDPDSSTNCT 336
Query: 44 ----YIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGREMSGR 96
+ +G+ VA+KSG + +G A+ RPS++I + R SG G+ IG EMSG
Sbjct: 337 LFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-----QGLCIGSEMSGG 391
Query: 97 IFNVTVDHLDTDKG-----------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+ +V + D + RGG + + +R+ K RV I + + D+G
Sbjct: 392 VEDVQIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMIH------AVPYNDDG 445
Query: 146 RDPKAIPKIRGISFVNV 162
+P + +F +
Sbjct: 446 EAADTVPVLEHFTFAGL 462
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS----G 79
P+TDGID D C I+ + + +K+G D DG+ + RP+ NI +R + G
Sbjct: 273 GPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDADGLRVNRPTENIVIRNCTVHKGG 332
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV V L + RGG IENI I ++ + V
Sbjct: 333 GLITC-----GSETSGGIRNVLAHDLKAFGTSNVLQLKSAMTRGGVIENIYITRVEAKNV 387
Query: 129 K 129
+
Sbjct: 388 R 388
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 48/215 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPV-----------YCSIAPNTDGIDPDCY----- 44
V+ + NI I ++ N+PF IH + Y + N DGIDP+
Sbjct: 185 VQFFDCKNI-TIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLVNNDGIDPEYTRNLLI 243
Query: 45 --IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
IE NG VA+K G D+DG + PS NI +R GV +G EMS I +V
Sbjct: 244 ENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEMSSGIQHV 301
Query: 101 TVDH------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
V++ + T+ RGG I +I + N + V+ ++ G EG D
Sbjct: 302 FVENCTYGGYCKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAG---EGMDN 358
Query: 149 KAIPKIRGISFVNVFSVNTTKAPICMK-NVSLLVL 182
++ I K C K NV+ LVL
Sbjct: 359 HHFTEVHDI---------YVKDLKCKKVNVAALVL 384
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 250 ILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ VR + G IG EMSG + NV V
Sbjct: 310 GDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 368
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 369 IGTDVGLRFKSARGRGGVVE 388
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 37/175 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPDC-- 43
V++ NS++I I L S F T+H Y + P+TDGID D
Sbjct: 169 VQVFNSSHIKIGGGLLLRRSGFWTLHICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSK 228
Query: 44 YIESGNGLVAV-------KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
+I + +AV K+G D DG+ + RP+ ++ +R S +GV G E SG
Sbjct: 229 HIVVAHADIAVNDDALCLKAGRDSDGLRVNRPTEDVVLRD-STIRDGAAGVTFGSETSGG 287
Query: 97 IFNVTVDHL------------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSN 139
N+ +L + RGG EN+ I ++ + + + +K++ N
Sbjct: 288 FRNIEAYNLKVFGHVPVGILFKSAHTRGGFAENVRIHDLTLTDIPVVLKVTMNWN 342
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 52/205 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGID------- 40
+EL N+ I + N+P T+ PV C APNTDG+D
Sbjct: 177 IELARCRNVRI-EGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRNV 235
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
DC I +G+ + +KS + P+ NI V +T C+G +G GR+
Sbjct: 236 FVSDCDIATGDDAICIKS---ENPYGELLPTKNITVTNCVLST-CCNGFKVGTSTHGRVE 291
Query: 99 NVTVDH------------------LDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG 140
N+ + + + GG++ ++I NI+ME + P+ + G
Sbjct: 292 NIVFSNSVIYNESTTPLNERATSGIALEVVDGGSMSGVLISNIQMENARTPLFVRLGR-- 349
Query: 141 HPDEGRDPKAIPKIRGISFVNVFSV 165
R P +RGI F + +
Sbjct: 350 -----RKPAQGSFLRGIRFEQIHAT 369
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ F NSP +HP C N DG+D DC +
Sbjct: 218 VLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLDSCRYGLVEDCSFDV 277
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G + P +I +R G IG EMSG + + V+
Sbjct: 278 GDDAICIKSGKDEAGRELGIPCEDILIRNCR-VYHGHGGFVIGSEMSGGVRRLRVEDCTF 336
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERV 128
+ TD +GRGG +E+I I I+M +
Sbjct: 337 MGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI 368
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 52/223 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIES 47
+ + NSP +HP + + +PNTDG+DP+ +
Sbjct: 232 ITLQGFYLKNSPAWVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSL 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRV-----SGTTPTCSGVGIGREMSGRIFNVTV 102
G+ +AVKSG + G PS NI +R+ G S VG G + + R+ +
Sbjct: 292 GDDCIAVKSGKIYMGRRYKTPSENIEIRQCLMENGHGAVTVGSEVGAGVK-AVRVRDCLF 350
Query: 103 DHLD------TDKGRGGN--IENIIIRNIKMERVKIPIKISRGSNGHPDEGRD------- 147
H D T +GRG + + +I ++I M+ V P ++ PD +
Sbjct: 351 RHTDRGLRVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREA 410
Query: 148 ---PKAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVK 187
+ P+I+ +SF ++ KA C S L P K
Sbjct: 411 LPADERTPEIQNLSFTDI------KAANCHAAASFLCGLPEQK 447
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 34/158 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD------ 42
V +N N+ + L N+PF I P+YC P+ DGID +
Sbjct: 210 VSAVNCKNVYL-EGLQLENTPFWNIVPIYCDNVIIRGITVNSVGIPSGDGIDIESSKNVL 268
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C + G+ +K+G DG+ + +P+ N+ + R S G+ +G E + I N
Sbjct: 269 IEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVI-RYSLARQGHGGITVGSETAAMIRN 327
Query: 100 VTVDHL---DTDKG--------RGGNIENIIIRNIKME 126
+ V + DT+ G RGG EN+ I+M
Sbjct: 328 LYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRMR 365
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 37/166 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
V L+N +L+ F NSP IHP+ C + N DG+D +
Sbjct: 256 VSLINCKKVLL-DGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLESCKNS 314
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG D G P+ N+ V+ + G +G EMS +
Sbjct: 315 VIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKN-NVVYHGHGGFVVGSEMSSGVK 373
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIK 133
NV V + + TD +GRGG +ENI I NI M + IP +
Sbjct: 374 NVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDM--INIPTQ 417
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 14 NLAFCNSPFRTIHPVYCS--IAPNTDGIDPD---------CYIESGNGLVAVKSGWDHDG 62
N+ C S T+ V S P+TDGID D C + + + +KSG +
Sbjct: 173 NMHLCYSRRITVEGVQISNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGREA 232
Query: 63 IAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------HLDTDKGR 111
AR + +I +R T SG+ +G E SG I V ++ + + + R
Sbjct: 233 AQKARTARDIVIRGC--TLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNR 290
Query: 112 GGNIENIIIRNIKMERVKIPIKI 134
GG I +I ++N+ + V+ P+ I
Sbjct: 291 GGFIRDITVQNLHLTDVRFPVLI 313
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 43/216 (19%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---- 43
V L+ N +L+ F NSP IHP+ + N DG+D +
Sbjct: 237 VSLVKCNKVLL-DGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLESCKNA 295
Query: 44 -----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + KSG + DG P+ N+ V+ + G +G EMSG +
Sbjct: 296 LVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKN-NTVYHAHGGFVVGSEMSGGVR 354
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERVKIPIKISR-----GSNGHP 142
NV V + + TD +GRGG +ENI I +I M + IP R G N P
Sbjct: 355 NVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDM--INIPTDAIRFNMFYGGN-SP 411
Query: 143 DEGRDPKAIPKIRGISFVNVFSVNTTKAPICMKNVS 178
D A + R + V V I MKN++
Sbjct: 412 VLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNIT 447
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 58/226 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPDCY- 44
+++ S+N+ + L S F T+H Y P+TDGID D
Sbjct: 167 IQIYKSDNVEL-QGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSS 225
Query: 45 --------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
IE + + +K+G D DG+ + RP+ N+ + V+ +G+ G E SG
Sbjct: 226 DVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVT-VRDGAAGITFGSETSGG 284
Query: 97 IFNVTVDHL------------DTDKGRGGNIENIIIRNIKMERVKIPI------------ 132
I +V + + RGG +E+I I +I M V
Sbjct: 285 IRHVEAYRIHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSVNFNWNPNYSY 344
Query: 133 -KISRGSNGHPD-------EGRDPKAIPKIRGISFVNVFSVNTTKA 170
KI +G PD E + +P ++ I N+ + +T+A
Sbjct: 345 AKIPQGLQNVPDYYKVMTQEVPRAQGLPHLKNIRISNIKASGSTQA 390
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
V + NS ++ F NSP IHP+ + N DG+D
Sbjct: 237 VSIQNSKRVMF-DGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVESCKNV 295
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ + G+ + +KSG D DG P NI V+ + GV +G EMSG +
Sbjct: 296 IVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKN-NIVYHGHGGVTVGSEMSGGVK 354
Query: 99 NVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
N+ V + +++GRGG +ENI I +I M +
Sbjct: 355 NLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDI 395
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 56/194 (28%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+P T+HP C +PNTDG +P+ G+ +AVK+
Sbjct: 254 NAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 313
Query: 57 G-----WDHDGIAMARPSS--NIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
G + D +A R S + + R G G+ IG EMSG + +VTV+
Sbjct: 314 GKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVIGSEMSGGVHDVTVEDCDMVG 367
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI- 151
L T +GRGG++ NI +R + ++ V + + ++GH + RDP +
Sbjct: 368 TDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALSANAHYHCDADGHDGWVQSRDPAPVD 427
Query: 152 ---PKIRGISFVNV 162
P I GI+ +V
Sbjct: 428 DGTPFIDGITVEDV 441
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ VR + G IG EMSG + NV V
Sbjct: 309 GDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 367
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 368 IGTDVGLRFKSARGRGGVVE 387
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 19/71 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPDCYIES 47
+E MNS N+LI SN+ F NSPF T+H VYCS PNTDGID I
Sbjct: 166 IESMNSKNVLI-SNVTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLI-- 222
Query: 48 GNGLVAVKSGW 58
+ A+K+G+
Sbjct: 223 ---MYALKTGY 230
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 243 VLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 302
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ VR + G IG EMSG + NV V
Sbjct: 303 GDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 361
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 362 IGTDVGLRFKSARGRGGVVE 381
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ VR + G IG EMSG + NV V
Sbjct: 309 GDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 367
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 368 IGTDVGLRFKSARGRGGVVE 387
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D +C+ ++
Sbjct: 249 VLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDA 308
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ VR + G IG EMSG + NV V
Sbjct: 309 GDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGGVKNVYVSECSF 367
Query: 105 LDTD--------KGRGGNIE 116
+ TD +GRGG +E
Sbjct: 368 IGTDVGLRFKSARGRGGVVE 387
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 49/212 (23%)
Query: 31 SIAPNTDGID---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG-- 79
S +PNTDGID I +G+ ++VKSG +A+ + + R ++
Sbjct: 212 SDSPNTDGIDIISSRQVHLHHLNISTGDDNISVKSG-------LAKRADDAESRDITIDH 264
Query: 80 -TTPTCSGVGIGREMSGRIFNVTVDHLD---TDKG--------RGGNIENIIIRNIKMER 127
+ G+ IG E I VT+ L T+ G RG NI +IIRN+ M++
Sbjct: 265 IQSENGHGISIGSETINGIGKVTLQDLHFTGTENGVRIKSGRDRGANIGPVIIRNVTMQQ 324
Query: 128 VKIPIKISR---GSNGHPDEGRDP-------KAIPKIRGISFVNVFSVNTTKAPIC---- 173
VK P+ I+ G+ G+ + P P I ++ ++ + T A I
Sbjct: 325 VKTPLVITDSYGGNGGYSSDSVSPIKYQTLTTTTPNIHDVTLQHIEASGATHAGIISGLP 384
Query: 174 ---MKNVSLLVLAPSVK--WQCQFVSGFNGQV 200
+KN+ L + + K Q ++V G+ QV
Sbjct: 385 EAPLKNIHLESVHITAKTGLQSRYVLGWQKQV 416
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-------------SIAPNTDGIDPD----- 42
V L N +L+ + F NSP +HP+ C A N DG+D +
Sbjct: 228 VVLTNCKKVLL-EGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIESCKNF 286
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG--- 95
C ++ G+ + +KSG D +G P+ N +R + G +G EMSG
Sbjct: 287 LIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRN-NTVYNGHGGFVVGSEMSGGAR 345
Query: 96 RIFNVTVDHLDTDK--------GRGGNIENIIIRNIKMERV 128
+F + TDK GRGG +E+I ++I M+ +
Sbjct: 346 YLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNI 386
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C I+ + + +KSG D DG+ + RP+ I +R R
Sbjct: 248 PSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIARKGAG 307
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
TC G E SG I N+ TV L + RGG +ENI + I + V+
Sbjct: 308 LITC-----GSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQ 362
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 48/166 (28%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HPV+C SI PN DG DPD
Sbjct: 345 VEFIGCTNVLM-ENYRTVNTPFWQHHPVHCTNVVIRGVTVDSIGPNNDGFDPDACSNVLC 403
Query: 44 ---YIESGNGLVAVKSGWDHD---GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
+G+ +A+KSG + D G A N + G G+ +G EM G +
Sbjct: 404 ENVTFNTGDDCIAIKSGKNLDTGYGPAQDHVIQNCTMNSGHG------GITLGSEMGGGV 457
Query: 98 FNVTVDHL------------------DTDKGRGGNIENIIIRNIKM 125
N+ +L T+ RGG ++N + N+ +
Sbjct: 458 QNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSL 503
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+P+TDGID D C + + + +KSG D DGI + RP +I V+
Sbjct: 198 SPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCE--IRA 255
Query: 84 CSGVGIGREMSGRIFNVTVDHL---DTDKG--------RGGNIENIIIRNIKMERVKIPI 132
GV IG E+SG ++ +T+ +L TD G R G I ++ + + M VK P
Sbjct: 256 GFGVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPF 315
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C I+ + + +KSG D DG+ + RP+ I +R R
Sbjct: 247 GPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIARKGA 306
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I N+ TV L + RGG +ENI + I + V
Sbjct: 307 GLITC-----GSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNV 361
Query: 129 K 129
+
Sbjct: 362 Q 362
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 42/188 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY--------CSIAP----NTDGIDPD------ 42
+ + N NI I L +P IH +Y C++ N DG DPD
Sbjct: 259 INMSNCQNIWI-HGLTLGFAPSWNIHFIYSDQIVTDHCTLKSEGVWNGDGWDPDSSTNST 317
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C + + VA+KSG + +G + RP+ +I R T G+ IG EMSG + +
Sbjct: 318 LYACDFYTEDDSVAIKSGKNPEGNVINRPTKHI--RVFDSVTHFGHGLCIGSEMSGGVED 375
Query: 100 VTV-----------DHLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
V + + K RGG + NI++R+I +++ S G+ D+G
Sbjct: 376 VRLWDCQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQMH------SVGYNDDGEGS 429
Query: 149 KAIPKIRG 156
K +P I G
Sbjct: 430 K-VPPILG 436
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 34/155 (21%)
Query: 8 NILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------PDCY---I 45
N ++I + NSP +HP+ C+ A N DG+D D Y
Sbjct: 205 NKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQNGDGLDLESCRFVDIYGVKF 264
Query: 46 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH- 104
+ G+ + +KSG + G + P+ ++ +R G IG EMS + +V +++
Sbjct: 265 DVGDDAICIKSGKNAIGRKITVPTEHVRIRDCV-VYHGHGGFVIGSEMSRGVRDVVIENC 323
Query: 105 --LDTDKG--------RGGNIENIIIRNIKMERVK 129
L TD G RGG +E+I IRNI+M ++
Sbjct: 324 LFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIE 358
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 12 ISNLAFCNSPFRTIHPVYC---SIAP----------NTDGID---------PDCYIESGN 49
I L + NSPF TIH VY IA NTDGID D +I+ G+
Sbjct: 95 IEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFIDVGD 154
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
++A+KSG+D G P+ N+ V + IG EMSG +
Sbjct: 155 DVIALKSGFDFCGREFGMPTKNVLVEN---SVFINENFAIGSEMSGGV 199
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 36/154 (23%)
Query: 16 AFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIESGNGLVA 53
F NSP IHP+ + N DG+D + + G+ +
Sbjct: 245 TFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLDLESCKNVLIYNNTFDVGDDAIC 304
Query: 54 VKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LDTD-- 108
KSG D DG P+ N+ V+ + G +G EMSG I NV V + + TD
Sbjct: 305 FKSGKDSDGRERGMPTENVIVKN-NIVYHGHGGFTVGSEMSGGIKNVHVSNCTFMGTDVG 363
Query: 109 ------KGRGGNIENIIIRNIKMERVKIPIKISR 136
+GRGG +ENI I I M + IP + R
Sbjct: 364 LRFKSTRGRGGVVENIWISKINM--INIPAEAIR 395
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGID---------PDCYIESGN 49
+++ + NSPF H VY S A N DG+D D + +G+
Sbjct: 229 VLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHLYNNDGLDIESSQFVLAEDNHFRTGD 288
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH----- 104
+ +KSG D DG + PS++I R + G+G+G EMSG I V ++
Sbjct: 289 DGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGIKRVFFENNILHE 346
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVK 129
++ RGG +E + IR ++ K
Sbjct: 347 GDSAYRFKSNLDRGGRVEMVRIRGSEVASFK 377
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 46/213 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSIAP-----------NTDGIDP-------- 41
++++ N+L+ ++ N P ++PV C+ N DG +P
Sbjct: 205 IQVIGCENVLV-EGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFNNNDGCNPENCNYVLI 263
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARP---SSNIAVR--RVSGTTPTCSGVGIGREMSG 95
DC + G VAVKSG + DG + + N+ +R +G T SG+ G EMSG
Sbjct: 264 EDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGT---SGIAFGSEMSG 320
Query: 96 RIFNVTVD-------------HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHP 142
I ++ D ++ RGG +E I IR + ++ +S +
Sbjct: 321 DIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRY---VSIHATMLY 377
Query: 143 DEGRDPKAIPKIRGISFVNVFSVNTTKAPICMK 175
DEG +P+ R I + F+ N I M+
Sbjct: 378 DEGWMGSYLPEYRDIR-IEDFTANGGTYGIFME 409
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD------- 42
L+ NIL+ S + NSP TIHP+ +PNTDG+DP+
Sbjct: 200 LVGCKNILVES-VTVKNSPSWTIHPLMSEDLKFINLYIENPKDSPNTDGLDPESCKNVHI 258
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
G+ +A+KSG PS +I +R + V +G EMS I N+
Sbjct: 259 LGVNFSVGDDCIAIKSGKIFISKIKTMPSQHIYIRNCN-MNFGHGAVVLGSEMSSGINNI 317
Query: 101 TVDH-----------LDTDKGRGGN--IENIIIRNIKMERVKIPIKIS 135
V++ + T +GRG I+ I RNIKM +V P I+
Sbjct: 318 YVENCLFNETDRGIRIKTRRGRGDTAIIDEIYARNIKMNKVLTPFTIN 365
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV T L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV T L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV T L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV T L + RGG +ENI + ++ + V
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NS IHP+ + + N DG+D +
Sbjct: 227 ILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIESCKNVLVEQSTFDV 286
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG + G P+ N+ VR + G +G EMSG N+ VD+
Sbjct: 287 GDDAICIKSGRNEAGRERGMPTENLWVRNCT-VYHAHGGFVVGSEMSGGAKNLYVDNCTF 345
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
T +GRGG +EN+ I NI M+ +
Sbjct: 346 IGTDIGLRFKTTRGRGGVVENVYINNIFMKDI 377
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC--YI 45
+ L N IL+ S F NS +HP A N DG+D D Y+
Sbjct: 202 LSLRNCKRILL-SGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSCKYV 260
Query: 46 -------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG + G + +PS I++R + G+ +G EMSG I
Sbjct: 261 TVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGGIVVGSEMSGGIK 319
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERV 128
+V V + TD +GRGG +ENI+I I+M +
Sbjct: 320 DVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDI 360
>gi|407710705|ref|YP_006794569.1| glycoside hydrolase family protein [Burkholderia phenoliruptrix
BR3459a]
gi|407239388|gb|AFT89586.1| glycoside hydrolase family 28 [Burkholderia phenoliruptrix BR3459a]
Length = 637
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 47/179 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 311 VEFIGCTNVLM-ENYCTNNTPFWQHHPTDCKNVVIRGVTTNSIGPNNDGFDPDACDNVLC 369
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D D P+ N ++ + + G+ +G EM G + N+
Sbjct: 370 DGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNSGH-GGITLGSEMGGGVQNI 426
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
+L T+ RGG ++N +++V +P ++ G+
Sbjct: 427 YARNLQMLNQNWATNPLNIAIRIKTNMNRGG-----FVKNFYVDKVTLPNGVALKGGGY 480
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCSI-------------APNTDGIDPD----- 42
V L N NI + L NSP T+HP Y +PNTDG+DP+
Sbjct: 226 VFLHNCKNIAM-QGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENV 284
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
I G+ +A+KSG + + +P+ NI +R S V IG E++ ++
Sbjct: 285 LILGADISVGDDCIAIKSGKYYMALRHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAGVY 343
Query: 99 NVTVDHLDTDKGRGGNIE 116
+V+V+++ KGR +E
Sbjct: 344 DVSVENVYL-KGRTEGLE 360
>gi|189459911|ref|ZP_03008696.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM 17136]
gi|189433376|gb|EDV02361.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM 17136]
Length = 236
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 35 NTDGIDPDCY-------IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 85
N DGIDP+ IE NG VA+K G D+DG RPS NI +R
Sbjct: 20 NNDGIDPEYTRNLLIENIEFNNGDDNVAIKCGRDNDGWNTNRPSENIIIRNCK--FKGLH 77
Query: 86 GVGIGREMSGRIFNVTVD------------HLDTDKGRGGNIENIIIRNIKMERVKIPIK 133
GV +G EMS + N+ ++ ++ T+ RGG + NI + N + V+
Sbjct: 78 GVVLGSEMSSGVQNIFIENCTYGGYCKRGIYMKTNPDRGGFLRNIYVNNCQFGEVEDLFY 137
Query: 134 ISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKAPICMK 175
++ G EG D ++ I ++ + A I ++
Sbjct: 138 VTSMYAG---EGMDNNHYSEVCNIYVKDISCKKASAAAIVLQ 176
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 35/159 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID--------- 40
+ NS IL+ + F NSP +HP+ A N DGID
Sbjct: 244 IANSKRILL-EGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIESCKNVLI 302
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+ + G+ + +KSG D G A P+ ++ VR + G IG EMSG N+
Sbjct: 303 ENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRN-NVVYHAHGGFVIGSEMSGGAKNL 361
Query: 101 TVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
V + T +GRGG +EN+ I N M+ +
Sbjct: 362 YVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDI 400
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P+TDGID D C I+ + ++ +K+G D DG+ + R + N+ +R +
Sbjct: 274 PSTDGIDIDSSTNILIENCTIDCNDDIICLKAGRDADGLRVNRSTENVLIRNCTAH---- 329
Query: 85 SGVGI---GREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
G G+ G E SG I N+ V L + RGG +EN+ + ++ E V+
Sbjct: 330 RGAGLITCGSETSGSIRNILAYDLKAIGTSVVFLLKSAMTRGGTVENVYVTRVEAENVR 388
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 247 VLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDALDVESCKNVVVTNSLFDA 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG + DG P N+ V+ + G +G EMSG + NV V
Sbjct: 307 GDDAICIKSGKNADGRRRGEPCENVLVKN-NTVLHGHGGFVVGSEMSGGVRNVYVADCTF 365
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIP 131
+ +GRGG +EN+ + NI M + IP
Sbjct: 366 IGTDVGLRFKSTRGRGGVVENVYVDNINM--INIP 398
>gi|323529874|ref|YP_004232026.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
gi|323386876|gb|ADX58966.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
Length = 667
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 47/179 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 341 VEFIGCTNVLM-ENYCTNNTPFWQHHPTDCKNVVIRGVTTNSIGPNNDGFDPDACDNVLC 399
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D D P+ N ++ + + G+ +G EM G + N+
Sbjct: 400 DGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNSGH-GGITLGSEMGGGVQNI 456
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
+L T+ RGG ++N +++V +P ++ G+
Sbjct: 457 YARNLQMLNQNWATNPLNIAIRIKTNMNRGG-----FVKNFYVDKVTLPNGVALKGGGY 510
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSG 79
APNTD IDP + YI+ + +A+K+ DG+ NI + +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANN 270
Query: 80 TTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
T G+ IG E +G + NV V++ + + +G+GG ++NI+ RN KM V
Sbjct: 271 TLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNV 330
Query: 129 KIPIKISRGSNGHP 142
++P+ S P
Sbjct: 331 EVPLVFSAYYKAAP 344
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 46/189 (24%)
Query: 19 NSPFRTIHPVYC--------SI-----APNTDGIDPDCYIE---------SGNGLVAVKS 56
N+P IHP C SI +PNTDG +P+ E G+ +A+K+
Sbjct: 249 NAPSWIIHPQGCHRLVAACLSIEAPHDSPNTDGFNPEGSSEIRVEGVRFTVGDDCIAIKA 308
Query: 57 GWDH--DGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD----------- 103
G A R + ++ +R GV IG EMSG + +V V+
Sbjct: 309 GKRGPCGEAAHLRETRDVQIRHCL-MERGHGGVVIGSEMSGGVHDVLVEDCEMIGTDRGL 367
Query: 104 HLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPD------EGRDPKAI----PK 153
L T +GRGG++ I +R ++ME V + + PD + R P A+ P+
Sbjct: 368 RLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYHCDPDGHDEWVQSRQPAALDEGTPE 427
Query: 154 IRGISFVNV 162
I GI+ ++
Sbjct: 428 IDGIAVEDI 436
>gi|330816973|ref|YP_004360678.1| glycoside hydrolase family protein [Burkholderia gladioli BSR3]
gi|327369366|gb|AEA60722.1| Glycoside hydrolase, family 28 [Burkholderia gladioli BSR3]
Length = 672
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 47/179 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 346 VEFIGCTNVLM-ENYHTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDACRNVLC 404
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D D P+ N V+ + G+ +G EM G + N+
Sbjct: 405 DGMVFNTGDDCIAIKSGKDLD--TGYGPAQNHVVQNCT-MNSGHGGITLGSEMGGGVENI 461
Query: 101 TVDHL------------------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGH 141
+L T+ RGG +RN ++ V +P +S G+
Sbjct: 462 YARNLTMLNQFWATNSLNIAIRIKTNMNRGG-----FVRNFYVDGVSLPNGVSLTGGGY 515
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 53/182 (29%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 347 VEFIGCTNVLM-ENYHTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDACNNVLC 405
Query: 44 ---YIESGNGLVAVKSGWDHD---GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
+G+ +A+KSG D D G A N + G G+ +G EM G I
Sbjct: 406 DGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHG------GITLGSEMGGGI 459
Query: 98 FNVTVDHL------------------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSN 139
NV +L T+ RGG +RN + V +P +S
Sbjct: 460 ENVYARNLTMLNQFWATNSLNIAIRIKTNMNRGG-----FVRNFYVNGVTLPNGVSLTGG 514
Query: 140 GH 141
G+
Sbjct: 515 GY 516
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 41/191 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD----- 42
V L+N ++I + L NS IHP+Y S +PNTDG++P+
Sbjct: 223 VSLVNCSDI-TVCGLTSQNSAAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESCENV 281
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
C + G+ +A+KSG RPS I VRR GV IG E+S +
Sbjct: 282 EIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCL-MEEGHGGVVIGSEISCGVQ 340
Query: 99 NVTVDH-----------LDTDKGRGGN--IENIIIRNIKMERVK----IPIKISRGSNGH 141
+V V + + T +GRG ++ + ++KME+V I + +GH
Sbjct: 341 DVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPDGH 400
Query: 142 PDEGRDPKAIP 152
D + +A+P
Sbjct: 401 SDLVQCKEALP 411
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 35/157 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD-------- 42
+M + NI + + L + P T+H +YC N DG DPD
Sbjct: 269 MMQAKNIHL-TELTLIDPPCWTVHMIYCDTVVTHGVTIQSKGIDNGDGWDPDSSQNLLIF 327
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
++G+ +A+KSG + +G + RP+ NI R G+ IG E SG + N+
Sbjct: 328 DTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSEQSGGVENIA 385
Query: 102 VD-----------HLDTDKGRGGNIENIIIRNIKMER 127
L RGG I + I + ++R
Sbjct: 386 FRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDR 422
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 41/167 (24%)
Query: 1 VELMNSNNILIISNLAFCNSP-----FRTIHPVYCS--------IAPNTDGIDPDCYIES 47
+ + +SNN+L+ + +SP R H V + APNTD IDP I+S
Sbjct: 174 IYIKSSNNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP---IDS 229
Query: 48 GNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTTPTCSGVGIGREMSGR 96
N + + DH I +P S NI + + G+ IG E SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNILKQGRGISIGSETSGG 287
Query: 97 IFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
+ NV V++ + T +G+GG ++NI RN KM V+IP+
Sbjct: 288 VNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 39/150 (26%)
Query: 20 SPFRTIHPVYC-----------SIAPNTDGID---------PDCYIESGNGLVAVKSGWD 59
SPF TIH C + N DGID +C + G+ V +K+G +
Sbjct: 518 SPFWTIHIYMCDGGVVRNLDVRAHGHNNDGIDFEMSKNFLVENCSFDQGDDAVVIKAGRN 577
Query: 60 HDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDH------------ 104
D + P NI +R + G T +GIG E+SG I N+ +
Sbjct: 578 QDAWRLNTPCENIVIRNCQILKGHTL----LGIGSEISGGIRNIYMHDCTVPNSVMRLFF 633
Query: 105 LDTDKGRGGNIENIIIRNIKMERVKIPIKI 134
+ T+ RGG IENI ++++ V+ ++I
Sbjct: 634 VKTNHRRGGFIENIYMKDVNAGNVQRVLEI 663
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 35/157 (22%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD-------- 42
+M + NI + + L + P T+H +YC N DG DPD
Sbjct: 269 MMQAKNIHL-TELTLIDPPCWTVHMIYCDTVVTHGVTIQSKGIDNGDGWDPDSSQNLLIF 327
Query: 43 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 101
++G+ +A+KSG + +G + RP+ NI R G+ IG E SG + N+
Sbjct: 328 DTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSEQSGGVENIA 385
Query: 102 VD-----------HLDTDKGRGGNIENIIIRNIKMER 127
L RGG I + I + ++R
Sbjct: 386 FRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDR 422
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ F NSP IHP+ C + N DG+D + +
Sbjct: 252 VLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDGLDLESCKNVVIYNNSFDV 311
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + KSG D DG A P+ N+ V+ G IG EMSG + NV V +
Sbjct: 312 GDDAICFKSGKDEDGRKRAVPTENVVVKNNV-VYHGHGGFVIGSEMSGGVRNVHVSNCTF 370
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIK 133
+ +GRGG +ENI I NI M + IP +
Sbjct: 371 IGTDVGLRFKSTRGRGGVVENIYISNIDM--IDIPTE 405
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 52/168 (30%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC------SIAPNTDGIDPDC----YIESGNG 50
+ LMN NI + + F SP +H +YC + NT DP+ I +G+G
Sbjct: 250 LSLMNGENICL-EGVTFLQSPAWGVHFIYCMGVTIKDVYINTR-FDPETGRKYKIHNGDG 307
Query: 51 L---------------------VAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSG 86
L V++KSG D+DG +A+ + N+ + + + G G
Sbjct: 308 LTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRRVAKSTDNVKLFDCKFLGGF-----G 362
Query: 87 VGIGREMSGRIFNVTVD-----------HLDTDKGRGGNIENIIIRNI 123
V +G EM+G + NV V+ L GRGG IENI +NI
Sbjct: 363 VVVGSEMAGNVRNVLVNNCFYENTACVSQLKAPWGRGGVIENITFKNI 410
>gi|259908124|ref|YP_002648480.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
gi|224963746|emb|CAX55246.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
Length = 416
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP I +G+ VA+K+ + H G P+ NI+V + T
Sbjct: 238 ARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV--IHNTFSF 289
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E +G I++V VD L +D+ G ++ +I +N+ M VK PI
Sbjct: 290 GHGMSIGSETNG-IYDVLVDDLTLNGTENGLRIKSDRSNAGEVDGVIYKNVTMTNVKNPI 348
Query: 133 KI 134
I
Sbjct: 349 VI 350
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 19 NSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIESGNGLVAVKS 56
NSP TIHP Y +PNTDG DP+ C I G+ +A+KS
Sbjct: 244 NSPSWTIHPYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKS 303
Query: 57 GWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-----------HL 105
G + S N A+R S + IG E + ++ V L
Sbjct: 304 GKARMAGERRKASRNFALRN-SILERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRL 362
Query: 106 DTDKGRGGN--IENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDPKAIP 152
T +GRG + + I +I+ME V +P + ++GH + +A+P
Sbjct: 363 KTRRGRGPDCFYDEIYFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALP 415
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 90/231 (38%), Gaps = 36/231 (15%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC--------SIAPNTDGIDPD---------C 43
+E + N+L+ N + T HPVYC ++ DGID D C
Sbjct: 196 MEFTHCRNVLVQDVFTQGNDMWST-HPVYCENVTFRNVTVHSGADGIDVDSCKGVVIDGC 254
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
+ + +++KSG +G + +I + + + +GIG E SG I NV V+
Sbjct: 255 EFVTRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGGIRNVHVE 314
Query: 104 H------------LDTDKGRGGNIENIIIRNIKMERVK---IPIKISRGSNGHPDEGRDP 148
H + + GRG IE+I + ++++ + + I PD
Sbjct: 315 HCKCLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQDPDPVPGD 374
Query: 149 KAIPKIRGISFVNVFSVNTTKAPICMKNVSLLVLAPSVKWQCQFVSGFNGQ 199
IP IR F N + P+ + S+ P + V+G G+
Sbjct: 375 DGIPTIRNFHFSN---IRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTCGK 422
>gi|320107935|ref|YP_004183525.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926456|gb|ADV83531.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 37/157 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP +I++G+ +A+K+G H S I SG
Sbjct: 237 ARNTDGIDPGSSQNVTITKSWIDNGDDNIAIKAGVHH--------MSVIDNHFYSG---- 284
Query: 84 CSGVGIGREMSGR----IFNVTVDH------LDTDKGRGGNIENIIIRNIKMERVKIPIK 133
G+ +G E + +T+DH + ++ RGG + ++ RN+ M V +PI
Sbjct: 285 -HGMSMGSEARDESEILVDTLTLDHTTSGIRIKSNVQRGGMVRGVVYRNLCMRDVAVPIS 343
Query: 134 ISRGSNGHPDEGRDPKAI-----PKIRGISFVNVFSV 165
IS NG +G D + P +GI NV S+
Sbjct: 344 ISPFYNGQTTDGIDDLGLKGSFTPDYKGIRVENVLSL 380
>gi|187919562|ref|YP_001888593.1| glycoside hydrolase [Burkholderia phytofirmans PsJN]
gi|187718000|gb|ACD19223.1| glycoside hydrolase family 28 [Burkholderia phytofirmans PsJN]
Length = 671
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 53/182 (29%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 345 VEFIGCTNVLM-ENYTTNNTPFWQHHPTDCKNVVIRGVTTNSIGPNNDGFDPDACNNVLC 403
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRV---SGTTPTCSGVGIGREMSGRI 97
+G+ +A+KSG D D P+ N ++ SG G+ +G EM G +
Sbjct: 404 DSVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCIMNSGH----GGITLGSEMGGGV 457
Query: 98 FNVTVDHLD------------------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSN 139
N+ +L T+ RGG ++N +++V +P +S
Sbjct: 458 QNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGG-----FVKNFYVDKVTLPNGVSLKGA 512
Query: 140 GH 141
G+
Sbjct: 513 GY 514
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+ +S L NSP T+HPV C +PNTDG +P+ +I
Sbjct: 232 VTLSGLTIRNSPSWTVHPVLCKGLIAADLTIENDPDSPNTDGFNPESSSDIRLVGLHISV 291
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAV-----RRVSGTTPTCSGVGIGREMSGRIFNVTV 102
G+ +A+K+G RP+ ++ + R G V IG EMS I ++ +
Sbjct: 292 GDDCIALKAGKRSPLGGPDRPTEHVRIENCLMERGHG------AVVIGSEMSAGISDIAI 345
Query: 103 DH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EG 145
+ + T +GRGG + +I + + ME V P+ ++ ++G + +
Sbjct: 346 RNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLMEDVATPVAVNSFYFCDADGQSNYVQS 405
Query: 146 RDPKAI----PKIRGISFVNV 162
R P + P IR I+ NV
Sbjct: 406 RSPLPVSVETPSIRSITVENV 426
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 21/116 (18%)
Query: 33 APNTDGIDPDC--YI-------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A N DG+D D Y+ + G+ + +KSG + G + +PS I++R +
Sbjct: 245 AQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHG 303
Query: 84 CSGVGIGREMSGRIFNVTV---DHLDTD--------KGRGGNIENIIIRNIKMERV 128
G+ +G EMSG I +V V + + TD +GRGG +ENI I I+M +
Sbjct: 304 HGGIVVGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREI 359
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 14/53 (26%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID 40
+ELM S ++ ++SNL F +SPF IHPVYCS +PNTDGID
Sbjct: 184 LELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGID 235
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
+EL+ + +L+ +PF HPV C S+ PN+DG DP
Sbjct: 314 IELIGCSKVLL-QGYQVNAAPFWLHHPVDCRDLLIRRVNMESLGPNSDGFDPESCDGVLV 372
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC +G+ +A+K+G + D P+ N+ +R + GV +G EM+G I +V
Sbjct: 373 DDCLFNNGDDCIAIKAGKNLD--TGHGPTRNVVIRNCVMNS-GHGGVTLGSEMAGGIEHV 429
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+ L+ T+ RGG + ++ +R++ +
Sbjct: 430 YAEKLEFRNIHWKDDPLNTAIRLKTNMNRGGFLRHLYVRDVTL 472
>gi|387870956|ref|YP_005802329.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
gi|283478042|emb|CAY73958.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
Length = 397
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP I +G+ VA+K+ + H G P+ NI+V + T
Sbjct: 219 ARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV--IHNTFSF 270
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E +G I++V VD L +D+ G ++ +I +N+ M VK PI
Sbjct: 271 GHGMSIGSETNG-IYDVLVDDLTLNGTENGLRIKSDRSNAGEVDGVIYKNVTMTNVKNPI 329
Query: 133 KI 134
I
Sbjct: 330 VI 331
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC--YI 45
+ L N IL+ S F NS +HP A N DG+D D Y+
Sbjct: 202 LSLRNCKRILL-SGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSCKYV 260
Query: 46 -------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ G+ + +KSG + G + +PS I +R + G+ +G EMSG I
Sbjct: 261 TVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCT-VYHGHGGIVVGSEMSGGIK 319
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERV 128
+V V + TD +GRGG +ENI+I I+M +
Sbjct: 320 DVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDI 360
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 60/231 (25%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSI--------------APNTDGIDP------- 41
L++ + + + N+ N+ F + P Y APNTDGIDP
Sbjct: 151 LIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHLRVLAPQRGAPNTDGIDPFSSSHIK 210
Query: 42 -DCYIES-GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT---PTCSGVGIGREMSGR 96
D Y S G+ +A+KSG A+ P + + T + G+ IG E++G
Sbjct: 211 IDHYFSSVGDDNIAIKSG------AINSPGPDAPSEDIVITDCIFESGHGLSIGSEIAGG 264
Query: 97 IFNVTVDHLD---TDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEG 145
+ +V + + TD+G RG + ++ ++I M+ V+ I IS EG
Sbjct: 265 VHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKDITMDDVRTSILISEYYPKAMPEG 324
Query: 146 RDPKA-----IPKIRGISFVNVFSVNTTKA------------PICMKNVSL 179
A P I NV SVN+ A I +KNVS+
Sbjct: 325 EVASAPITRLTPHFHDIHIENVKSVNSDWAGVIVGLPESPVTDISLKNVSI 375
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIA---------------PNTDGIDPDC--YI 45
+++ + +II ++ + F T+H +Y S P+TDGID D +I
Sbjct: 197 IVDGSEDIIIRDVTLKQAGFWTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWI 256
Query: 46 ESGNGLVA-------VKSGWDHDGIAMARPSSNIAV-----RRVSGT----TPTCSGVG- 88
N + +KSG D DG+ + RP+ + + R+ G + T G+
Sbjct: 257 RIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCISRKGDGLITFGSETSGGMRH 316
Query: 89 -IGREMSGRIFNVTVDHLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
I R + V + L + + RGG +E+I++ NI+M+ V+ +++
Sbjct: 317 IIARNLKAHGTKVGI-RLKSARNRGGVVEDILLENIQMDSVRTAFEVT 363
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 34 PNTDGIDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 84
P+TDG+D D I++ + + +K+G D DG+ + RP+ N+ +R S
Sbjct: 238 PSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRN-STIRAAY 296
Query: 85 SGVGIGREMSGRIFNVTVDHL------------DTDKGRGGNIENIIIRNIKMERVKIPI 132
+GV G E SG I NV V L + RGG +I I +I + + + I
Sbjct: 297 AGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGI 356
Query: 133 KI 134
+I
Sbjct: 357 RI 358
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTT 81
APNTD IDP I+S N + + DH I +P S NI + +
Sbjct: 218 APNTDAIDP---IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNIL 272
Query: 82 PTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E SG + NV V++ + T +G+GG ++NI RN KM V+I
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 131 PI 132
P+
Sbjct: 333 PL 334
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 41/194 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVY--------CSIAP----NTDGIDPD------ 42
+ + N NI +S L + +H +Y C+ N DG DPD
Sbjct: 252 INMSNCQNI-TMSGLKLKDGASWNVHMIYSDGIVTNNCTFYSEGIWNGDGWDPDSSTNCT 310
Query: 43 ---CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
C +G+ +A+KSG + +G ++RPS +I R G+ IG EMSG I +
Sbjct: 311 IFGCTFNTGDDSIAIKSGKNPEGNEISRPSEHI--RIFDCKCAMGRGITIGSEMSGGIND 368
Query: 100 VTVDHLDTD-----------KGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
V + D K RGG ++N+ +R+ + R+ S G+ D+G
Sbjct: 369 VQIWDCDISSSRHGIEIKGTKKRGGYVKNVKVRDSRTARILFH------SVGYNDDGAGA 422
Query: 149 KAIPKIRGISFVNV 162
P F N+
Sbjct: 423 PKPPVFEKCIFENI 436
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 34/137 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
+II + F NSP T+HP+ C A N+D ID + C +
Sbjct: 471 IIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWYAQNSDAIDLESCRNGVLEGCTFST 530
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D G P+ N ++ G IG EMSG + N+ +
Sbjct: 531 GDDGITIKSGRDEQGRKRGVPTENFVIKDCI-VYHAHGGFVIGSEMSGGVRNMFISDCTF 589
Query: 104 -------HLDTDKGRGG 113
T +GRGG
Sbjct: 590 MGSDVGLRFKTARGRGG 606
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D + P+ VR + + G+ +G EM G + V
Sbjct: 398 EDCTFNTGDDCIAIKSGKNRD--TESGPAKRHLVRNCTMNS-GHGGITLGSEMGGGVEQV 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 40/170 (23%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVY--------CSI-----APNTDGIDPDC------ 43
+N+ +++ + NSP TIHP+ SI APNTD +DP+
Sbjct: 226 FLNACKNILVEGVTIKNSPSWTIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLI 285
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARP--SSNIAVRRVSGTTPTCSGVGIGREMSGR-- 96
G+ +A+KSG I+ P S NI +R + + V +G EMS
Sbjct: 286 LGDTFSVGDDCIAIKSG--KIDISKKNPVSSENINIRNCNMRSGH-GAVVLGSEMSSGLK 342
Query: 97 -------IFNVTVDHL--DTDKGRG--GNIENIIIRNIKMERVKIPIKIS 135
IFN T L T +GRG G I+NI ++NIKM++V P I+
Sbjct: 343 SIFIEKCIFNATDRGLRIKTRRGRGSKGIIDNIHMKNIKMDKVLTPFSIN 392
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 31/127 (24%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSG 79
APNTD IDP + YI+ + +A+K+ DG+ NI + +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANN 270
Query: 80 TTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
T G+ IG E +G + NV V++ + + +G+GG ++NI+ RN +M V
Sbjct: 271 TLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNV 330
Query: 129 KIPIKIS 135
++P+ S
Sbjct: 331 EVPLVFS 337
>gi|385788697|ref|YP_005819806.1| polygalacturonase [Erwinia sp. Ejp617]
gi|310767969|gb|ADP12919.1| polygalacturonase [Erwinia sp. Ejp617]
Length = 409
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP I +G+ VA+K+ + H G P+ NI+V + T
Sbjct: 219 ARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV--IHNTFGF 270
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E +G I++V VD L +D+ G ++ +I +N+ M VK PI
Sbjct: 271 GHGMSIGSETNG-IYDVLVDDLTLSGTENGLRIKSDRSNAGEVDGVIYKNVTMTNVKNPI 329
Query: 133 KI 134
I
Sbjct: 330 VI 331
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 81/205 (39%), Gaps = 52/205 (25%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ F NSP IHP+ + N DG+D + +
Sbjct: 252 VLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQNGDGLDLESCKNVLIYNNSFDV 311
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + KSG + DG P+ N+ V+ + G IG EMSG + NV V +
Sbjct: 312 GDDAICFKSGKNEDGRRRGVPTENVIVKN-NVVYHGHGGFVIGSEMSGGVRNVHVANCTF 370
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIPIK--------------ISRGSNGHP 142
+ +GRGG +ENI I NI M + IP + + G N P
Sbjct: 371 IGTDVGLRFKSTRGRGGVVENIYIFNIDM--IDIPTEPIRFNLFYGGNAPLLDDGGNSVP 428
Query: 143 DEGRDPKAIPKIRGI-SFVNVFSVN 166
G++ K +P SF N+F N
Sbjct: 429 -SGKEAKPVPVTEETPSFRNIFMKN 452
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 31/127 (24%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSG 79
APNTD IDP + YI+ + +A+K+ DG+ NI + +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANN 270
Query: 80 TTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
T G+ IG E +G + NV V++ + + +G+GG ++NI+ RN +M V
Sbjct: 271 TLKQGRGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNV 330
Query: 129 KIPIKIS 135
++P+ S
Sbjct: 331 EVPLVFS 337
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 35/161 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID------- 40
V + NS ++ F NSP +HP+ + N DG+D
Sbjct: 233 VSIQNSKRVMF-DGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNV 291
Query: 41 --PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 98
+ + G+ + +KSG D DG P NI V+ + GV +G EMSG +
Sbjct: 292 IIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKN-NIVYHGHGGVTVGSEMSGGVK 350
Query: 99 NVTVDH---LDTD--------KGRGGNIENIIIRNIKMERV 128
N+ V + + TD +GRGG +ENI I ++ M +
Sbjct: 351 NLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDI 391
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 34/152 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP IHP C+ A N DGID + +
Sbjct: 238 VLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQNGDGIDIESCRNVVLTNSRFDV 297
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G P NI V G +G EMSG + NV V +
Sbjct: 298 GDDGICIKSGKDKAGRDRGIPCENILVDNCI-VFHGHGGFVVGSEMSGGVRNVRVSNCTF 356
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERV 128
+ +GRGG +ENI I +I M +
Sbjct: 357 SGTDVGLRFKSARGRGGVVENIWIEDIAMNNI 388
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
P+TDGID D YI+ + + +K+G D DG+ + RP+ + +R
Sbjct: 240 GPSTDGIDVDSSSDILIENAYIDCNDDNICLKAGRDADGLRVNRPTERVVIRNCI-AAKG 298
Query: 84 CSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERVK 129
V IG E SG I NV T+ L + RGG +E+I + K E VK
Sbjct: 299 GGLVTIGSETSGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVEHIYVTRCKGEDVK 355
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 34 PNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGT 80
P+TDGID D C ++ + + +K+G D DG+ + RP+ N+ VR R
Sbjct: 243 PSTDGIDIDSSTNILIENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG 302
Query: 81 TPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV T L + RGG +ENI + + + +
Sbjct: 303 LLTC-----GSETSGSIRNVLAHDLTAYGTGTTLRLKSSMNRGGTVENIYMTRVVADSI 356
>gi|420246887|ref|ZP_14750314.1| endopolygalacturonase [Burkholderia sp. BT03]
gi|398073036|gb|EJL64222.1| endopolygalacturonase [Burkholderia sp. BT03]
Length = 674
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 348 VEFLGCTNVLM-ENYRTNNTPFWQHHPTDCANVVIRGVTVDSIGPNNDGFDPDACNNVLC 406
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D P+ N ++ + + G+ +G EM G + N+
Sbjct: 407 DGVTFNTGDDCIAIKSGKALD--TTYGPAQNHVIQNCTMNSGH-GGITLGSEMGGGVQNI 463
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG ++N + N+ +
Sbjct: 464 YARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTL 506
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 36/157 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ F NSP IHP+ + N DG+D + +
Sbjct: 248 ILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNGDGLDLESCKNVVIYNNTFDV 307
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + KSG + DG P+ N+ V+ + G +G EMSG + NV V
Sbjct: 308 GDDAICFKSGKNEDGRRRGIPTENVIVKN-NIVYHGHGGFVVGSEMSGDVRNVHVSDCTF 366
Query: 104 -------HLDTDKGRGGNIENIIIRNIKMERVKIPIK 133
+ +GRGG +ENI I NI M + IP +
Sbjct: 367 MGTDVGLRFKSTRGRGGVVENIYISNIDM--IDIPTE 401
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|390567093|ref|ZP_10247442.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
gi|389940941|gb|EIN02721.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
Length = 674
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 348 VEFLGCTNVLM-ENYRTNNTPFWQHHPTDCANVVIRGVTVDSIGPNNDGFDPDACNNVLC 406
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D P+ N ++ + + G+ +G EM G + N+
Sbjct: 407 DGVTFNTGDDCIAIKSGKALD--TTYGPAQNHVIQNCTMNSGH-GGITLGSEMGGGVQNI 463
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG ++N + N+ +
Sbjct: 464 YARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTL 506
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 56/202 (27%)
Query: 19 NSPFRTIHPVYC--------SIA-----PNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C SIA PNTDG +P+ G+ +AVK+
Sbjct: 247 NAASWTIHPQGCEDLIAAGLSIAAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 306
Query: 57 G-----WDHDGIAMAR--PSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD------ 103
G + D +A R + + R G G+ IG EMSG + +V V+
Sbjct: 307 GKRGPDGEDDHLAETRGVRVGHCLMERGHG------GLVIGSEMSGGVHDVAVEDCDMIG 360
Query: 104 -----HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI- 151
L T +GRGG + NI +R + ++ VK + + ++GH D + R+P +
Sbjct: 361 TDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAHYHCDADGHDDWVQSRNPAPVD 420
Query: 152 ---PKIRGISFVNVFSVNTTKA 170
P I GI+ +V N + A
Sbjct: 421 SGTPFIDGITVEDVEIRNLSHA 442
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 35/136 (25%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPS------SNIAVRRV 77
APNTD IDP + YI+ + +A+K+ A P NI +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-------EKADPRFPEGVVDNIYI--A 268
Query: 78 SGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKME 126
+ T G+ IG E +G + NV V++ + + +G+GG ++NI+ RN +M
Sbjct: 269 NNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMH 328
Query: 127 RVKIPIKISRGSNGHP 142
V++P+ S P
Sbjct: 329 NVEVPLVFSAYYKAAP 344
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 35/136 (25%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPS------SNIAVRRV 77
APNTD IDP + YI+ + +A+K+ A P NI +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKA-------EKADPRFPEGVVDNIYI--A 268
Query: 78 SGTTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKME 126
+ T G+ IG E +G + NV V++ + + +G+GG ++NI+ RN +M
Sbjct: 269 NNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMH 328
Query: 127 RVKIPIKISRGSNGHP 142
V++P+ S P
Sbjct: 329 NVEVPLVFSAYYKAAP 344
>gi|227537594|ref|ZP_03967643.1| possible glycosyl hydrolase, partial [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242543|gb|EEI92558.1| possible glycosyl hydrolase [Sphingobacterium spiritivorum ATCC
33300]
Length = 214
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 36/168 (21%)
Query: 3 LMNSNNILIISNLAFCNSPFRTIHPVYCSIA---------------PNTDGIDPD----- 42
+++ + +II ++ + F T+H +Y S P+TDGID D
Sbjct: 12 IVDGSEDIIIRDVTLKQAGFWTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWI 71
Query: 43 ----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV-----RRVSGT----TPTCSGVG- 88
I+ + +KSG D DG+ + RP+ + + R+ G + T G+
Sbjct: 72 RIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCISRKGDGLITFGSETSGGMRH 131
Query: 89 -IGREMSGRIFNVTVDHLDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
I R + V + L + + RGG +E+I++ NI+M+ V+ +++
Sbjct: 132 IIARNLKAHGTKVGI-RLKSARNRGGVVEDILLENIQMDSVRTAFEVT 178
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 36/169 (21%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPD---------CYIES 47
++I + NSP TIHP++ +PNTDGI+P+
Sbjct: 235 ILIEEVTVQNSPSWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSV 294
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV----- 102
G+ +A+KSG + G + S +I +R G+ IG EM+G + NV+
Sbjct: 295 GDDCIAIKSGKLYLGQRLKIASQDIMIRNCH-MKFGHGGIVIGSEMAGGVKNVSAIRCIF 353
Query: 103 ------DHLDTDKGRG--GNIENIIIRNIKMERVKIPIKISRGSNGHPD 143
+ T +GRG G I I NI M++V P I+ PD
Sbjct: 354 EETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPD 402
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSG 79
P+TDGID D C ++ + + +K+G D DG+ + RP+ NI VR R
Sbjct: 244 GPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGA 303
Query: 80 TTPTCSGVGIGREMSGRIFNV-----------TVDHLDTDKGRGGNIENIIIRNIKMERV 128
TC G E SG I NV + L + RGG +ENI + + + V
Sbjct: 304 GLITC-----GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNV 358
Query: 129 K 129
+
Sbjct: 359 R 359
>gi|147772320|emb|CAN69072.1| hypothetical protein VITISV_012807 [Vitis vinifera]
Length = 111
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 125 MERVKIPIKISRGSNGHPDEGRDPKAIPKIRGISFVNVFSV------------NTTKAPI 172
ME+ + IKI+ HPD+ +P A+P ++G+ +V+ + N+ I
Sbjct: 1 MEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGI 60
Query: 173 CMKNVSL--LVLAPSVKWQCQFVSGFNGQVFPLPCPQLQN 210
C+ ++L + + W+C VSG V P PC +L +
Sbjct: 61 CLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTS 100
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 52/200 (26%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C +PNTDG +P+ G+ +AVK+
Sbjct: 247 NAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKA 306
Query: 57 G-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD----- 106
G + D +A R I+VR G+ IG EMSG + +VTV+ D
Sbjct: 307 GKRGPDGEDDHLAETR---GISVRHCL-MQRGHGGLVIGSEMSGGVHDVTVEDCDMIGTD 362
Query: 107 ------TDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI--- 151
T +GRGG + NI +R + ++ V+ + + ++GH D + R+P +
Sbjct: 363 RGLRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDG 422
Query: 152 -PKIRGISFVNVFSVNTTKA 170
P + GI+ +V N A
Sbjct: 423 TPFVDGITVEDVEIRNLAHA 442
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D P+ VR + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D P+ VR + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 34/162 (20%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD--------- 42
+N N+ I + S + P YC P DGID +
Sbjct: 211 INCTNVFI-EGITMNRSALWNVVPTYCENVIIRGITVNSLEIPRGDGIDIESSKNVLIEY 269
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C + + + +KSG +G+ + RP++N+ +R S T G+ G E +G I N+
Sbjct: 270 CTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRH-SLATNGPGGITCGSETAGNIKNIYA 328
Query: 103 DH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIK 133
T + RGG EN++ I+M VK K
Sbjct: 329 HDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVKDAFK 370
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 34/153 (22%)
Query: 5 NSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD---------C 43
N N+LI + S F I PVYC TDGID + C
Sbjct: 220 NCKNVLI-EGVTLERSLFWNIVPVYCDGVIIRGATVDSHGHGRTDGIDIESTRNVLIEYC 278
Query: 44 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD 103
++ G+ +KSG DGI + +PS NI +R G+ G E + I N+ V
Sbjct: 279 SLDCGDDCFTMKSGRGEDGIRVNKPSENIVIRYCLAKR-GWGGIVCGSETAAMIRNLYVH 337
Query: 104 -----------HLDTDKGRGGNIENIIIRNIKM 125
T + RGG EN+ I+M
Sbjct: 338 DCVFTGTKSGLRFKTRRSRGGGGENLTFERIRM 370
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D P+ VR + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP C SI PN DG DPD
Sbjct: 289 VEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 347
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D P+ VR + + G+ +G EM G + +
Sbjct: 348 EDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSEMGGGVEQI 404
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 405 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 447
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 52/200 (26%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C +PNTDG +P+ G+ +AVK+
Sbjct: 247 NAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKA 306
Query: 57 G-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-------- 103
G + D +A R I+VR G+ IG EMSG + +VTV+
Sbjct: 307 GKRGPDGEDDHLAETR---GISVRHCL-MQRGHGGLVIGSEMSGGVHDVTVEDCDMIGTD 362
Query: 104 ---HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI--- 151
L T +GRGG + NI +R + ++ V+ + + ++GH D + R+P +
Sbjct: 363 RGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDG 422
Query: 152 -PKIRGISFVNVFSVNTTKA 170
P + GI+ +V N A
Sbjct: 423 TPFVDGITVEDVEIRNLAHA 442
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPD--- 42
V++ NS++I + S L S F T+H Y P+TDGID D
Sbjct: 177 VQIFNSDHIKL-SGLMLKRSGFWTVHICYSHDIEVDGVTIRNNEDGKGPSTDGIDIDSSK 235
Query: 43 ------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
I + + +K+G D DG+ + RP+ ++ ++ S +GV G E SG
Sbjct: 236 KILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKD-SVVRAGAAGVTFGSETSGG 294
Query: 97 IFNVTVDHLDTDK------------GRGGNIENIIIRNIKMERVKIPIKI 134
NV + K RGG E+I I ++ ++ V + I++
Sbjct: 295 FRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRIHDMDLKDVAVAIRV 344
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS------IAPN------TDGIDPD--------- 42
+N N+ + + F + I P YC I N TDGID D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHIVIRGITVNSFGHGRTDGIDIDSSNDVLIEY 257
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV +
Sbjct: 258 CSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVYM 316
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIK 124
T + RGG +ENI + ++
Sbjct: 317 HDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|383316410|ref|YP_005377252.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379043514|gb|AFC85570.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 784
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 33/158 (20%)
Query: 33 APNTDGIDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP +I +G+ VA+K+G PS +I + +
Sbjct: 241 ARNTDGIDPASSSHVLLAHNWINTGDDNVAIKAG-------TTGPSRDITI--IHNHFYQ 291
Query: 84 CSGVGIGREMSGRIFNVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E+ + +V VD L +D+ RGG + +I ++ M V+ P+
Sbjct: 292 GHGLSIGSEVQSGVSDVHVDDLSLDGTTNGLRIKSDRSRGGLVSDISYAHVCMRHVRWPL 351
Query: 133 KISRGSNGHPDEGRDPKAIPKIRGISFVNVFSVNTTKA 170
+ N EG A+P+ R I F ++ ++ +A
Sbjct: 352 VLDTLYNPRA-EG---DALPEFRDIRFSHIHALEGGQA 385
>gi|371776328|ref|ZP_09482650.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 485
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 47/219 (21%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS---------------IAPNTDGIDPD--- 42
+++ +S NI + + S F T+H +Y P+TDG++ D
Sbjct: 194 IQISDSENI-TLKDFQVRQSGFWTVHILYSKYVTVDGLTIRNNIDGFGPSTDGVNVDSSS 252
Query: 43 ------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV-----RRVSGTTPTCSGVGIGR 91
C ++ + VK+G D DG+ + +P+ + + RR G+ + IG
Sbjct: 253 YVEIMNCDVDCNDDNFTVKAGRDADGLRVNKPAEYVYIHDCIARRGGGS------LVIGS 306
Query: 92 EMSGRIFNVT-----------VDHLDTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNG 140
E SG + +V V HL + RGG IE+I + N++ + V+ ++ N
Sbjct: 307 ETSGWVRHVKSENMKALGSHHVLHLKSAFTRGGGIEDIQVENVQADGVRSFCVVTLNWNP 366
Query: 141 HPDEGRDPKAIPKIRGISFVNVFSVNTTKAPICMKNVSL 179
PK I +I V + V K ++NVS+
Sbjct: 367 SYSYATLPKGIKEIPSHWKVMLEEVPEEKGLPYIRNVSV 405
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 43/211 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS--------------IAPNTDGIDP----- 41
V++ S + L ++ NSP + +C PNTDGIDP
Sbjct: 160 VDITESQH-LTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKN 218
Query: 42 ----DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 97
I++G+ +A+KSG + P ++ + G+ +G E++G I
Sbjct: 219 IEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIH--DSIFRHGHGLSVGSELAGGI 275
Query: 98 FNVTVDHL---DTDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGR 146
+V V+++ +TD G RG +I ++ +NI+M V PI+I+ P G
Sbjct: 276 SDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGVGQPIQITEYYPKWPAAGT 335
Query: 147 D-PKAI----PKIRGISFVNVFSVNTTKAPI 172
D KA+ P+ IS N+ + A I
Sbjct: 336 DTAKAVDAHTPRFHDISLENITATGAKDAII 366
>gi|386015018|ref|YP_005933295.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
gi|327393077|dbj|BAK10499.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
Length = 290
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 34/152 (22%)
Query: 31 SIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
+ A NTDG+DP + I +G+ VA+K+G P+S+I++ ++
Sbjct: 100 ATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQF 149
Query: 82 PTCSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E++ + +V VD L +D+ RGG + I +N+ M+ V
Sbjct: 150 GFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDN 209
Query: 131 PIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
P+ + + H D IP R I+F NV
Sbjct: 210 PVVM----DTHYDTHASGTMIPDYRDITFDNV 237
>gi|386080254|ref|YP_005993779.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
gi|354989435|gb|AER33559.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
Length = 410
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 34/152 (22%)
Query: 31 SIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
+ A NTDG+DP + I +G+ VA+K+G P+S+I++ ++
Sbjct: 220 ATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQF 269
Query: 82 PTCSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E++ + +V VD L +D+ RGG + I +N+ M+ V
Sbjct: 270 GFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDN 329
Query: 131 PIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
P+ + + H D IP R I+F NV
Sbjct: 330 PVVM----DTHYDTHASGTMIPDYRDITFDNV 357
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ F NSP IHP+ + N DG+D + +
Sbjct: 247 VLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGDGLDLESCKNVLIYNNSFDV 306
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + KSG + DG P+ N+ V+ + G +G EMSG + NV V
Sbjct: 307 GDDAICFKSGKNEDGRRRGMPTENVIVKN-NIVYHGHGGFVVGSEMSGGVRNVHVSKCTF 365
Query: 105 LDTD--------KGRGGNIENIIIRNIKMERVKIPIK 133
+ TD +GRGG +ENI I +I M + IP +
Sbjct: 366 MGTDTGLRFKSTRGRGGVVENIYISDIDM--IDIPTE 400
>gi|378768157|ref|YP_005196628.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
gi|365187641|emb|CCF10591.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
Length = 417
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 34/152 (22%)
Query: 31 SIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
+ A NTDG+DP + I +G+ VA+K+G P+S+I++ ++
Sbjct: 227 ATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQF 276
Query: 82 PTCSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E++ + +V VD L +D+ RGG + I +N+ M+ V
Sbjct: 277 GFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDN 336
Query: 131 PIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
P+ + + H D IP R I+F NV
Sbjct: 337 PVVM----DTHYDTHASGTMIPDYRDITFDNV 364
>gi|291616648|ref|YP_003519390.1| Peh [Pantoea ananatis LMG 20103]
gi|291151678|gb|ADD76262.1| Peh [Pantoea ananatis LMG 20103]
Length = 417
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 34/152 (22%)
Query: 31 SIAPNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 81
+ A NTDG+DP + I +G+ VA+K+G P+S+I++ ++
Sbjct: 227 ATARNTDGVDPMGSSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQF 276
Query: 82 PTCSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKI 130
G+ IG E++ + +V VD L +D+ RGG + I +N+ M+ V
Sbjct: 277 GFGHGMSIGSEINRGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDN 336
Query: 131 PIKISRGSNGHPDEGRDPKAIPKIRGISFVNV 162
P+ + + H D IP R I+F NV
Sbjct: 337 PVVM----DTHYDTHASGTMIPDYRDITFDNV 364
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 50/193 (25%)
Query: 5 NSNNILIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPDCY----- 44
NS N+ I +L + F T+ VY S P+TDG+D D
Sbjct: 194 NSKNV-TIKDLNIQQAGFWTVQVVYSSYVTVDGLTINNNVGGHGPSTDGVDIDSSSWILV 252
Query: 45 ----IESGNGLVAVKSGWDHDGIAMARPSSNIAVR----RVSGTTPTCSGVGIGREMSGR 96
I+ + +K+G D DG+ + RP + +R R G T +G E SG
Sbjct: 253 QNTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVARKGGGLLT-----LGSETSGG 307
Query: 97 IFNVTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSN-----G 140
I N+ ++ + RGG +EN+++ N+ M+ V ++++ N
Sbjct: 308 IRNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMDSVGTVLQVNMNWNPAYSYS 367
Query: 141 HPDEGRDPKAIPK 153
+G D +IPK
Sbjct: 368 ELPKGYDYNSIPK 380
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC-----------SIA-PNTDGIDPD--------- 42
+N N+LI + S F + P+YC SI P+ DGID +
Sbjct: 208 INCTNVLI-EGITMERSTFWNVCPIYCENVIIRGITVNSIGIPSGDGIDIESCKNVLIEY 266
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C + G+ +K+G DG+ + +P+ N+ + R S GV G E +G + NV V
Sbjct: 267 CTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQQGHGGVTCGSETAGGVKNVYV 325
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIKM----ERVKIPIKISRGSNGHPDEGRD 147
T + R G + + + I+M E K + S+ G E
Sbjct: 326 HDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDLLGSKRYVGELAERYP 385
Query: 148 PKAIPKI 154
P+A+ K+
Sbjct: 386 PRAVNKL 392
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCSIA------------PNTDGIDPD--------- 42
+N NILI ++ +PF + P+YC P DGID +
Sbjct: 232 INCKNILI-EGISLERTPFWNVVPIYCENVIIRGITVNSVGIPRGDGIDIESSKNVLIEY 290
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C + G+ +K+G DG+ + +P+ N+ V R G+ +G E + +I N+ V
Sbjct: 291 CTLSCGDDCFTMKAGRGEDGLRVNKPTENVVV-RFCLAKEGHGGITVGSETAAKINNLYV 349
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIKM 125
T + RGG N I+M
Sbjct: 350 HDTVFDDTGVGIRFKTRRPRGGGGANYYYERIRM 383
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 38/187 (20%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDPDCY- 44
+++ NS+ + + S L S F T+H Y P+TDGID D
Sbjct: 174 IQVFNSSQVKL-SGLMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSK 232
Query: 45 --------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGR 96
I + + +K+G D DG+ + RP+ +I +R S +GV IG E SG
Sbjct: 233 KVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRD-SVIRDGAAGVTIGSETSGG 291
Query: 97 IFNVTVDHL------------DTDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDE 144
N+ L + + RGG EN+ +I M V + ++++ N
Sbjct: 292 FRNIEAYGLTVLKQVPVGILFKSARTRGGWGENLRFHDITMTDVPVVLRVNMNWNPSYSY 351
Query: 145 GRDPKAI 151
P+ I
Sbjct: 352 AHIPETI 358
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 73/229 (31%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSI---------------APNTDGIDPDC--YIESGNGLV 52
+ + N+ F ++H +Y P+TDGID D YI N +
Sbjct: 201 VTVENIVLYQPGFWSLHILYSKYVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNI 260
Query: 53 -------AVKSGWDHDGIAMARPSSNIAVRR-VSGTTPTCSGVGI---GREMSGRIFNVT 101
+K+G D DG+ + RP + +R ++G G G+ G E SG I N+
Sbjct: 261 NCNDDNFCLKAGRDSDGLRVNRPCRYVVIRDCIAG-----HGDGLFTCGSETSGGINNIV 315
Query: 102 VDHLD---TDKG--------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPD------- 143
++ T G RGG IE+I + NI+M V+ P + N HP
Sbjct: 316 AYNMTGMGTKYGLRFKSTCQRGGVIEDIYLCNIEMIGVRDPFVVDL--NWHPAYSTSKLP 373
Query: 144 EGRDPKAI-----------------PKIRGISFVNVFSVNTTKAPICMK 175
EG D K + PK R + F+NV + N A C+K
Sbjct: 374 EGYDEKNVPTHWIKMLTPVDPKQGTPKFRNVHFMNVTATN---AQTCIK 419
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NSP +HP+ C + N D +D + ++
Sbjct: 250 VLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQNGDALDLESCNRALIQNSSFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D DG P N+ +R + G +G EMSG + N+ VD+
Sbjct: 310 GDDGICIKSGKDEDGRRRGEPCQNVIIRN-NVVLHGHGGFVVGSEMSGGVKNIYVDNCTF 368
Query: 105 LDTD--------KGRGGNIE 116
L TD +GRGG +E
Sbjct: 369 LGTDVGLRFKSTRGRGGVVE 388
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGID---------PDCYIES 47
+++ + F NS +HP+ A N DGID + +
Sbjct: 228 VLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVESCNRVLIENSSFDV 287
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH--- 104
G+ + +KSG D G P+ N+ +R G IG EMSG N+ V++
Sbjct: 288 GDDGLCMKSGRDEAGRKRGMPTENVIIRDCK-VYHAHGGFVIGSEMSGGARNIWVNNCTF 346
Query: 105 --------LDTDKGRGGNIENIIIRNIKMERVKIP 131
T +GRGG +ENI +I+M + IP
Sbjct: 347 IGTDIGLRFKTTRGRGGIVENIYCNDIQM--IDIP 379
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS------IAPN------TDGIDPD--------- 42
+N N+ + + F + I P YC I N TDGID D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNSFGHGRTDGIDIDSSNDVLIEY 257
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV +
Sbjct: 258 CSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVYM 316
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIK 124
T + RGG +ENI + ++
Sbjct: 317 YDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS------IAPN------TDGIDPD--------- 42
+N N+ + + F + I P YC I N TDGID D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNSFGHGRTDGIDIDSSNDVLIEY 257
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV +
Sbjct: 258 CSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVYM 316
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIK 124
T + RGG +ENI + ++
Sbjct: 317 YDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYCS------IAPN------TDGIDPD--------- 42
+N N+ + + F + I P YC I N TDGID D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNSFGHGRTDGIDIDSSNDVLIEY 257
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV +
Sbjct: 258 CSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVYM 316
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIK 124
T + RGG +ENI + ++
Sbjct: 317 YDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 40/167 (23%)
Query: 4 MNSNNILIISNLAFCNSP-----FRTIHPVYCS--------IAPNTDGIDPDCYIESGNG 50
+ +N ++I + NSP R H V + APNTD IDP I+S N
Sbjct: 173 VTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDP---IDSQNI 229
Query: 51 LVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
+ + DH I +P S NI + + G+ IG E SG + N
Sbjct: 230 RITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNVLKQGRGISIGSETSGGVNN 287
Query: 100 VTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V V++ + + +G+GG ++N+ R+ +M V++P+ S
Sbjct: 288 VLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFS 334
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 40/167 (23%)
Query: 4 MNSNNILIISNLAFCNSP-----FRTIHPVYCS--------IAPNTDGIDPDCYIESGNG 50
+ +N ++I + NSP R H V + APNTD IDP I+S N
Sbjct: 183 VTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDP---IDSQNI 239
Query: 51 LVA---VKSGWDHDGIAMARPSS--------NIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
+ + DH I +P S NI + + G+ IG E SG + N
Sbjct: 240 RITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYI--ANNVLKQGRGISIGSETSGGVNN 297
Query: 100 VTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS 135
V V++ + + +G+GG ++N+ R+ +M V++P+ S
Sbjct: 298 VLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFS 344
>gi|147852430|emb|CAN79536.1| hypothetical protein VITISV_011359 [Vitis vinifera]
Length = 243
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 81 TPTCSGVGIGREMSGRIFNVTVD-HLDTDKGRGGNIENIIIRNIKMERVK 129
TPTCSGVGIG EM G I NVT+D D K G+ +N + + ER K
Sbjct: 168 TPTCSGVGIGNEMPGEISNVTIDVEADRFKIWEGSSQNPWLSSYADERFK 217
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 31/127 (24%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSG 79
APNTD IDP + YI+ + +A+K+ DG+ NI + +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANN 270
Query: 80 TTPTCSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERV 128
T G+ IG E +G + NV V++ + + +G+GG ++NI+ N +M V
Sbjct: 271 TLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYSNTRMHNV 330
Query: 129 KIPIKIS 135
++P+ S
Sbjct: 331 EVPLVFS 337
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ +N N+PF HP SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG D D P+ +R + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ +N N+PF HP SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG D D P+ +R + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 497
>gi|253687385|ref|YP_003016575.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753963|gb|ACT12039.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 402
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 94/237 (39%), Gaps = 65/237 (27%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDP------- 41
+N + + N++ NSP H V+ S A NTDGIDP
Sbjct: 182 INKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNIT 239
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
I +G+ VA+K+ + G A R NI++ + T G+ IG E G ++N
Sbjct: 240 IAHSNISTGDDNVAIKA---YKGRAETR---NISI--LHNEFGTGHGMSIGSETMG-VYN 290
Query: 100 VTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
VTVD L+ +DK G + I N+ M+ V PI I E ++
Sbjct: 291 VTVDDLNMNGTTNGLRIKSDKSAAGVVNGIRYSNVVMKNVAKPIVIDT-----VYEKKEG 345
Query: 149 KAIPKIRGISF---------VNVFSVNTTKAPI--CMKNVSLLVLAPSVKWQCQFVS 194
+P I+F V V + K PI MKNV L WQ + V+
Sbjct: 346 SNVPDWSDITFKDITSQTKGVVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ +N N+PF HP SI PN DG DPD
Sbjct: 339 VEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 397
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG D D P+ +R + + G+ +G EM G + +
Sbjct: 398 EDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSEMGGGVEQI 454
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 455 YATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTL 497
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 33 APNTDGIDPDCYIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPT 83
APNTD IDP I+S N + + DH I +P S V +
Sbjct: 225 APNTDAIDP---IDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIANNVLKQ 281
Query: 84 CSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E SG + NV V++ + + +G+GG ++N+ R+ +M V++P+
Sbjct: 282 GRGISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPL 341
Query: 133 KIS 135
S
Sbjct: 342 VFS 344
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|129937|sp|P27644.1|PGLR_RHIRD RecName: Full=Polygalacturonase; AltName: Full=PGL; AltName:
Full=Pectinase
gi|142256|gb|AAA22102.1| PGL ORF [Agrobacterium tumefaciens]
Length = 312
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 53/201 (26%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C +PNTDG +P+ G+ +AVK+
Sbjct: 42 NAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKA 101
Query: 57 G-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD---TD 108
G + D +A R I VR P G+ IG EMSG + +VTV+ D TD
Sbjct: 102 GKRGPDGEDDHLAETR---GITVRHCL-MQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTD 157
Query: 109 KGR---------GGNIENIIIRNIKMERVKIPIKISR----GSNGHPD--EGRDPKAI-- 151
+G GG + NI +R + ++ V+ + + ++GH D + R+P +
Sbjct: 158 RGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVND 217
Query: 152 --PKIRGISFVNVFSVNTTKA 170
P + GI+ +V N A
Sbjct: 218 GTPFVDGITVEDVEIRNLAHA 238
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 250 ILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 309
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 310 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 368
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 369 MGTDVGLRFKSTRGRGGVVE 388
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 241 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 300
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 301 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 359
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 360 MGTDVGLRFKSTRGRGGVVE 379
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 241 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 300
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 301 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 359
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 360 MGTDVGLRFKSTRGRGGVVE 379
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ +N N+PF HP SI PN DG DPD
Sbjct: 341 VEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 399
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG D D P+ +R + + G+ +G EM G + +
Sbjct: 400 EDCTFNTGDDCIAIKSGKDRD--VEYGPAKRHLIRNCTMNS-GHGGITLGSEMGGGVEQI 456
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 457 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 499
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 241 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 300
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 301 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 359
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 360 MGTDVGLRFKSTRGRGGVVE 379
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 241 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 300
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 301 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 359
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 360 MGTDVGLRFKSTRGRGGVVE 379
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 241 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 300
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 301 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 359
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 360 MGTDVGLRFKSTRGRGGVVE 379
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 10 LIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC---------YIES 47
+++ + F NSP +HP+ C + N D ID + ++
Sbjct: 251 VLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDA 310
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD---- 103
G+ + +KSG D DG P N+ V+ + G +G EMSG + N+ V+
Sbjct: 311 GDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGGVKNIYVEDCTF 369
Query: 104 -------HLDTDKGRGGNIE 116
+ +GRGG +E
Sbjct: 370 MGTDVGLRFKSTRGRGGVVE 389
>gi|322434168|ref|YP_004216380.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321161895|gb|ADW67600.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 485
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 40/192 (20%)
Query: 1 VELMNSNNILIISNL--AFCNSPFRTIHPVYCSI-APNTDGIDP---------DCYIESG 48
V L NS N + N F + PV ++ A NTDGIDP +I++G
Sbjct: 226 VTLHNSPNFHVAVNQTNGFTAWGVHLLTPVDKTLDARNTDGIDPGSSTNVTIAHSWIDNG 285
Query: 49 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF----NVTVDH 104
+ +A+K+ H + + T G+ IG E +G F +T DH
Sbjct: 286 DDNIAIKANVKHMSV-------------LDNHFYTGHGMSIGSEATGDEFILVDGLTEDH 332
Query: 105 ------LDTDKGRGGNIENIIIRNIKMERVKIPIKIS-----RGSNGHPDEGRDPKAIPK 153
+ ++ RGG ++ +NI M VK PI IS + + G D G IP
Sbjct: 333 TTSGIRIKSNVTRGGYDHDLTYKNICMRGVKNPIAISPYYTNQTTEGFVDPGYTGTKIPD 392
Query: 154 IRGISFVNVFSV 165
+ I N+++
Sbjct: 393 YKKIRLENIYAT 404
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDP-------- 41
V+ ++ N+L N+PF +PV C S+ PN+DG DP
Sbjct: 321 VQFISCTNVLF-EGYQTTNTPFWQHNPVNCHNMHVKRIYANSMGPNSDGFDPESCTNVLI 379
Query: 42 -DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
DC+ +G+ +A+ SG D P+ NI ++ + + +G MSG I N+
Sbjct: 380 EDCHFNTGDDCIAIDSGKGPD--IQFGPAKNIVIQNCKMQSGH-GALTLGSIMSGGIENI 436
Query: 101 TVDH------------------LDTDKGRGGNIENIIIRNIKM 125
+ L T+ RGG + N+ +RN+ +
Sbjct: 437 YAQNLVFENSYWKTDPLNIAIRLKTNMSRGGYLRNMHVRNVHI 479
>gi|227113343|ref|ZP_03826999.1| endo-polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 402
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 94/237 (39%), Gaps = 65/237 (27%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDP------- 41
+N + + N++ NSP H V+ S A NTDGIDP
Sbjct: 182 INKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNIT 239
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
I +G+ VA+K+ + G A R NI++ + T G+ IG E G ++N
Sbjct: 240 IAHSSISTGDDNVAIKA---YKGRAETR---NISI--LHNEFGTGHGMSIGSETMG-VYN 290
Query: 100 VTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
VTVD L+ +DK G + + N+ M+ V PI I E ++
Sbjct: 291 VTVDDLNMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDT-----VYEKKEG 345
Query: 149 KAIPKIRGISFVNVFSVN---------TTKAPI--CMKNVSLLVLAPSVKWQCQFVS 194
+P I+F ++ S K PI MKNV L WQ + V+
Sbjct: 346 SNVPDWSDITFKDITSQTKGVVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|292488652|ref|YP_003531536.1| polygalacturonase [Erwinia amylovora CFBP1430]
gi|292899813|ref|YP_003539182.1| endo-polygalacturonase [Erwinia amylovora ATCC 49946]
gi|428785593|ref|ZP_19003084.1| polygalacturonase [Erwinia amylovora ACW56400]
gi|291199661|emb|CBJ46780.1| endo-polygalacturonase [Erwinia amylovora ATCC 49946]
gi|291554083|emb|CBA21209.1| polygalacturonase [Erwinia amylovora CFBP1430]
gi|426277155|gb|EKV54882.1| polygalacturonase [Erwinia amylovora ACW56400]
Length = 416
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP I +G+ VA+K+ + H G P+ NI+V + T
Sbjct: 238 AINTDGIDPISSKNVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV--IHNTFEF 289
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E +G I++V VD L +D+ G ++ + +N+ M V+ P+
Sbjct: 290 GHGMSIGSETNG-IYDVLVDDLTLNGTENGLRIKSDRSDAGEVDGVTYKNVTMTNVRNPV 348
Query: 133 KI 134
I
Sbjct: 349 VI 350
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 14/56 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYCS-------------IAPNTDGIDPDC 43
+ELM S+NI I SNL +SP IHPVY S +PNTDGI+PD
Sbjct: 150 IELMFSDNIQI-SNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDS 204
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 46/185 (24%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C +PNTDG +P+ G+ +AVK+
Sbjct: 249 NAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 308
Query: 57 G-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD----- 106
G + D +A R I VR G+ IG EMSG + +V+V+ D
Sbjct: 309 GKRSPDGEDDHLAETR---GIRVRHCL-MERGHGGLVIGSEMSGGVHDVSVEDCDMVGTD 364
Query: 107 ------TDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDPKAIPKIRG 156
T +GRGG + NI +R + ++ V+ + + ++GH + + + P +G
Sbjct: 365 RGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKG 424
Query: 157 ISFVN 161
F++
Sbjct: 425 TPFID 429
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ N N+PF HP SI PN DG DPD
Sbjct: 338 VEFIGCTNVLM-ENYQTQNTPFWQHHPTASRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 396
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ VA+KSG D D P+ +R + + G+ +G EM G + +
Sbjct: 397 ERCTFNTGDDCVAIKSGKDRD--TEYGPAKRHLIRDCTMNS-GHGGITLGSEMGGGVEQI 453
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 454 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVL 496
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 46/185 (24%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+ TIHP C +PNTDG +P+ G+ +AVK+
Sbjct: 247 NAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 306
Query: 57 G-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD-------- 103
G + D +A R I VR G+ IG EMSG + +V+V+
Sbjct: 307 GKRGPDGEDDHLAETR---GIRVRHCL-MERGHGGLVIGSEMSGGVHDVSVEDCDMVGTD 362
Query: 104 ---HLDTDKGRGGNIENIIIRNIKMERVKIPIKISR----GSNGHPDEGRDPKAIPKIRG 156
L T +GRGG + NI +R + ++ V+ + + ++GH + + + P +G
Sbjct: 363 RGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKG 422
Query: 157 ISFVN 161
F++
Sbjct: 423 TPFID 427
>gi|312172794|emb|CBX81050.1| polygalacturonase [Erwinia amylovora ATCC BAA-2158]
Length = 398
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 33 APNTDGIDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
A NTDGIDP I +G+ VA+K+ + H G P+ NI+V + T
Sbjct: 220 AINTDGIDPISSKNVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV--IHNTFEF 271
Query: 84 CSGVGIGREMSGRIFNVTVDHL-----------DTDKGRGGNIENIIIRNIKMERVKIPI 132
G+ IG E +G I++V VD L +D+ G ++ + +N+ M V+ P+
Sbjct: 272 GHGMSIGSETNG-IYDVLVDDLTLNGTENGLRIKSDRSDAGEVDGVTYKNVTMTNVRNPV 330
Query: 133 KI 134
I
Sbjct: 331 VI 332
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPD------- 42
VE + N+L+ ++ N+PF HP C SI PN DG DPD
Sbjct: 342 VEFIGCTNVLM-ADYQTQNTPFWQHHPTACRNVVIRGVTTNSIGPNNDGFDPDACTDVLC 400
Query: 43 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
C +G+ +A+KSG + D P+ +R + + G+ +G EM G + +
Sbjct: 401 EECTFNTGDDCIAIKSGKNLD--TEYGPAKRHLIRNCTMNS-GHGGITLGSEMGGGVEQI 457
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ ++ + +
Sbjct: 458 YATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 500
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 33 APNTDGIDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 83
+PNTD +DP+ C G+ +A+KSG G +P++ +R
Sbjct: 263 SPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGH 322
Query: 84 CSGVGIGREMSGRIFNVTVDH-----------LDTDKGRGGN--IENIIIRNIKMERVKI 130
+ +G EM+G + N++V + T +GRG + I+ I +NIKM+ V
Sbjct: 323 -GAITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRGKDAVIDGIEFKNIKMDGVLT 381
Query: 131 PI 132
PI
Sbjct: 382 PI 383
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 35/139 (25%)
Query: 19 NSPFRTIHPVYCSI-------------APNTDGIDPD---------CYIESGNGLVAVKS 56
N+PF T+HP C N+DGIDPD C++ + + +KS
Sbjct: 163 NAPFWTLHPAGCDDVLISGLRILNDLNVANSDGIDPDHSTNVRIIGCHVTCADDCICLKS 222
Query: 57 GWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHL---DTDKG--- 110
G P N+ + + T T + + IG E +G NV VD+ D+++G
Sbjct: 223 S---SGNMEYGPLKNVIISGCT-LTSTSAALKIGTEGTGDFENVVVDNCIISDSNRGISI 278
Query: 111 ---RGGNIENIIIRNIKME 126
GGN+ N+ NI +E
Sbjct: 279 QIRDGGNVRNVSFSNIIIE 297
>gi|413961867|ref|ZP_11401095.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
gi|413930739|gb|EKS70026.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
Length = 664
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 42/163 (25%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC-----------SIAPNTDGIDPDC------ 43
VE + N+L+ S N+PF HP C SI PN DG DPD
Sbjct: 338 VEFIGCTNVLMES-YRTNNTPFWQHHPTDCRNVVMRSVTVDSIGPNNDGFDPDACDTVLC 396
Query: 44 ---YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 100
+G+ +A+KSG D D P+ N ++ + + G+ +G EM G + +
Sbjct: 397 ENVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNS-GHGGITLGSEMGGGVQKI 453
Query: 101 TVDHLD------------------TDKGRGGNIENIIIRNIKM 125
+L T+ RGG +++ + N+ +
Sbjct: 454 YARNLQMLNKFWATNSLNIAIRIKTNMNRGGFVKDFYVDNVTL 496
>gi|197210953|gb|ACH48398.1| polygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 65/236 (27%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDP------- 41
+N + + N++ NSP H V+ S A NTDGIDP
Sbjct: 182 INKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNIT 239
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
I +G+ VA+K+ + G A R NI++ + T G IG E G ++N
Sbjct: 240 IAHSSISTGDDNVAIKA---YKGRAETR---NISI--LHNEFGTGHGTSIGSETMG-VYN 290
Query: 100 VTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
VTVD L+ +DK G + + N+ M+ V PI I E ++
Sbjct: 291 VTVDDLNMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDT-----VYEKKEG 345
Query: 149 KAIPKIRGISF---------VNVFSVNTTKAPI--CMKNVSLLVLAPSVKWQCQFV 193
+P I+F V V + K PI MKNV L WQ + V
Sbjct: 346 SNVPDWSDITFKDITSQTKGVVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNV 398
>gi|255622277|ref|XP_002540267.1| hypothetical protein RCOM_1982630 [Ricinus communis]
gi|223497416|gb|EEF22116.1| hypothetical protein RCOM_1982630 [Ricinus communis]
Length = 197
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 41 PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGREMSGRIF 98
DC + G+ ++VKSG D D + PS NI +R R+ + IG E+S I
Sbjct: 8 EDCVFDQGDDAISVKSGRDQDAWRLGVPSKNIVMRNCRIRNGHQL---MAIGSELSAGIE 64
Query: 99 NVTVD--HLD-----------------TDKGRGGNIENIIIRNI 123
NV VD H D T++ RGG + NI + N+
Sbjct: 65 NVFVDNCHFDHSGSAVRSTINNLLFVKTNERRGGYVRNIHLSNV 108
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 1 VELMNSNNILIISNLAFCNSPFRTIHPVYC 30
+EL+NS N+LI S++ NSPF T+HPVYC
Sbjct: 228 IELVNSTNVLI-SSVTLSNSPFWTVHPVYC 256
>gi|261879890|ref|ZP_06006317.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333401|gb|EFA44187.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 439
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 10 LIISNLAFCNSPFRTIHPVYCSIA-------------PNTDGIDPD---------CYIES 47
L IS+L + T+H + C A N DGID D CYI S
Sbjct: 168 LRISDLTIKEGAYWTVHLIGCEDAVIEGISLLNNLKIRNGDGIDIDHSRHVRISNCYITS 227
Query: 48 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH-LD 106
G+ + +K+ ++ P+ +I V + T+ +C+ + IG E I+NVT+D+ +
Sbjct: 228 GDDCICLKNRREYQEYG---PTHDITVTNCTMTSRSCA-IKIGSENMDSIYNVTIDNCII 283
Query: 107 TDKGRGGNIEN 117
T RG I+N
Sbjct: 284 TRSNRGLGIQN 294
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 34/154 (22%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC------------SIAPNTDGIDPD--------- 42
+N N+LI +A S + P+YC + P+ DGID +
Sbjct: 281 INCTNVLI-EGIAMERSTLWNVVPIYCENVIIRGITVNSTKVPSGDGIDIESCKNVLIEY 339
Query: 43 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 102
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +G I N+ V
Sbjct: 340 CTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGVIKNLYV 398
Query: 103 D-----------HLDTDKGRGGNIENIIIRNIKM 125
T + RGG +N ++M
Sbjct: 399 HDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 432
>gi|403057463|ref|YP_006645680.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804789|gb|AFR02427.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 402
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 65/237 (27%)
Query: 4 MNSNNILIISNLAFCNSPFRTIHPVYC---------------SIAPNTDGIDP------- 41
+N + + N++ NSP H V+ S A NTDGIDP
Sbjct: 182 INKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNIT 239
Query: 42 --DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFN 99
I +G+ VA+K+ + G A R N+++ + T G+ IG E G ++N
Sbjct: 240 IAHSSISTGDDNVAIKA---YKGRAETR---NVSI--LHNEFGTGHGMSIGSETMG-VYN 290
Query: 100 VTVDHLD-----------TDKGRGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRDP 148
VTVD L+ +DK G + + N+ M+ V PI I E ++
Sbjct: 291 VTVDDLNMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDT-----VYEKKEG 345
Query: 149 KAIPKIRGISFVNVFSVN---------TTKAPI--CMKNVSLLVLAPSVKWQCQFVS 194
+P I+F ++ S K PI MKNV L WQ + V+
Sbjct: 346 SNVPDWSDITFKDITSQTKGVVVLNGENAKKPIEVTMKNVK---LTSDSTWQIKNVT 399
>gi|300727868|ref|ZP_07061247.1| polygalacturonase (pectinase) family [Prevotella bryantii B14]
gi|299774852|gb|EFI71465.1| polygalacturonase (pectinase) family [Prevotella bryantii B14]
Length = 1030
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 12 ISNLAFCNSPFRTIHPVYC-------------SIAPNTDGID---------PDCYIESGN 49
+ ++AF N F +H +Y P++DGID D +I++ +
Sbjct: 792 LRDVAFRNQSFWCLHILYTHGFTVHGIRIDAEDYIPSSDGIDIDSSTGISITDSHIKAYD 851
Query: 50 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDHLD--- 106
+++KSG DG + + + I + GV IG E+SG I +V V + D
Sbjct: 852 DCISIKSGKGVDGRRINQYAGQIKIENCHFDYGH-GGVAIGSEVSGDIKDVLVANCDMKG 910
Query: 107 ---------TDKGRGGNIENIIIRNIKMERVK--IPIKISRGSNGHPDEGRDPKAIPKIR 155
+ RGG IENI NI + + + I ++++ G + P + +++
Sbjct: 911 ENWNPIRFKSQPSRGGVIENITFDNIAIAKAQNMISVQMAWRMKGEDEPAYSP--LTQLK 968
Query: 156 GISFVNV 162
I N+
Sbjct: 969 NIVIRNI 975
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 46/198 (23%)
Query: 22 FRTIHPVYCSIAPNTDGIDP----DCYIES-----GNGLVAVKSGWDHDGIAMARPSSNI 72
R IH + APNTD IDP IE G+ +A+KSG + + PS+ I
Sbjct: 198 IRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYI 256
Query: 73 AVRR---VSGTTPTCSGVGIGREMSGRIFNVTVDHLD---TDKG--------RGGNIENI 118
+R + G G+ +G E++G ++ +++ TD G RG ++ ++
Sbjct: 257 TIRDCIFLHG-----HGLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDL 311
Query: 119 IIRNIKMERVKIPIKISR-GSNGHPDEGRDPKAI----PKIRGISFVNVFSVNTT----- 168
+ +NI+M VK + IS + +P +P I P I+ NV + N+
Sbjct: 312 VFKNIQMTNVKNALIISEFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAI 371
Query: 169 ----KAPI---CMKNVSL 179
+API +KNVS+
Sbjct: 372 AGLPEAPIRDVVLKNVSI 389
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 19 NSPFRTIHPVYC-------------SIAPNTDGIDPD---------CYIESGNGLVAVKS 56
NSP T+HP + + + NTDG+DP+ YI G+ +A+KS
Sbjct: 246 NSPSWTLHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKS 305
Query: 57 GWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVDH---LDTDKG--- 110
G + G P+S++ VR+ V +G E++ + +V + ++TD+G
Sbjct: 306 GKIYMGRKHKIPTSDMEVRQCC-MRDGHGAVTVGSEIAAGVKDVHIRDCIFMNTDRGLRV 364
Query: 111 -------RGGNIENIIIRNIKMERVKIPIKISRGSNGHPDEGRD----PKAI------PK 153
R +++I NI M+ V P ++ PD + KA+ P
Sbjct: 365 KTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDRTPA 424
Query: 154 IRGISFVNVFSVN 166
I+ ++F ++ + N
Sbjct: 425 IKRLTFKDIKATN 437
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 33/148 (22%)
Query: 10 LIISNLAFCNSPFRTIHPVYC-----------SIA-PNTDGIDPD---------CYIESG 48
++I + + F I P YC SI P DGID + C +++G
Sbjct: 232 VLIEGVRLERTAFWNIVPQYCDRVIIRGVTIHSIGIPRGDGIDVESSKNVLIEYCTLQTG 291
Query: 49 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVD----- 103
+ +A+K+G DG+ + RP+ N+ VR G+ IG E +G I + V
Sbjct: 292 DDCLAMKAGRGWDGLRVNRPTENVVVRYCLAEKGH-GGITIGSETAGMIRKLYVHDCVFN 350
Query: 104 ------HLDTDKGRGGNIENIIIRNIKM 125
T + RGG E + I++
Sbjct: 351 NEGNGIRFKTRRPRGGGGEQLFYDRIRL 378
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,010,512,389
Number of Sequences: 23463169
Number of extensions: 172004479
Number of successful extensions: 290812
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 856
Number of HSP's that attempted gapping in prelim test: 288123
Number of HSP's gapped (non-prelim): 1341
length of query: 247
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 108
effective length of database: 9,097,814,876
effective search space: 982564006608
effective search space used: 982564006608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)