BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036165
(566 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGR2|PP436_ARATH Pentatricopeptide repeat-containing protein At5g59600
OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1
Length = 534
Score = 610 bits (1574), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/503 (59%), Positives = 377/503 (74%), Gaps = 2/503 (0%)
Query: 66 KMPIISRSFHL-SPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYT 124
K+ I+ SF L S +Y E IE RDR G++LHA L+ SG+ARLT+IA KL+TFY
Sbjct: 3 KLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYV 62
Query: 125 ECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPS 184
EC + AR +FDE+PK +I + + GA AR GY+QE++ F EM+ GLK + F++PS
Sbjct: 63 ECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPS 122
Query: 185 VLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKD 244
+LKA +L D G+ IH LVLK S+ +DAF+VSSLIDMYSK G V A+KVF ++ E+D
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD 182
Query: 245 IVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQ 304
+V NAM+SGY A EALNLV+++ +KP+V+TWN LISGFS ++ VS++ +
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 305 LMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA 364
LM G +PDVVSWTS+ISGLVHNF N++AFD FK+ML+ G P SATI ++LPAC + A
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
M+ GKEIHG ++V G+E VRSAL+DMY KCGFISEA LF K ++ TVT+NSMIF
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIF 362
Query: 425 GCANHGYCDEAIELFNQMEER-KKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIM 483
ANHG D+A+ELF+QME +KLDHL+FTA+LTAC H GL +LGQ LF +MQ KY+I+
Sbjct: 363 CYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIV 422
Query: 484 PRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKH 543
PR EHYACMVDLLGRAG+L EAYEMIK M EPDLFVWGALL AC+NHGN+ELA IAAKH
Sbjct: 423 PRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKH 482
Query: 544 LSELEPESAANNMLLTDLYANAG 566
L+ELEPE++ N +LLT LYANAG
Sbjct: 483 LAELEPENSGNGLLLTSLYANAG 505
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 280/511 (54%), Gaps = 41/511 (8%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R++ G+ LH ++ SG + L+ FY + Q + AR +FDE+ + ++ W ++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y G ++ ++VF +M + G++ ++ I SV C I G +HS+ +K F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ ++L+DMYSKCG ++ AK VF EM ++ +V+ +M++GY + GLA EA+ L EE+
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 272 GTPRVKPNVVT----------------------W-------------NTLISGFSKSGDQ 296
+ P+V T W N L+ ++K G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 297 VMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQG-FCPTSATISS 355
+F MR K D++SW ++I G N +EA F +L + F P T++
Sbjct: 449 QEAELVFSEMRVK----DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 356 ILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERN 415
+LPACAS + +G+EIHG + G D HV ++LVDMYAKCG + A LFD ++ ++
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 416 TVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFN 474
V+W MI G HG+ EAI LFNQM + + D +SF ++L AC H GLV+ G R FN
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 475 MMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNI 534
+M+ + KI P EHYAC+VD+L R G L +AY I+ M PD +WGALL C+ H ++
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 535 ELAEIAAKHLSELEPESAANNMLLTDLYANA 565
+LAE A+ + ELEPE+ +L+ ++YA A
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 242/510 (47%), Gaps = 45/510 (8%)
Query: 61 IEAHYKMPIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLI 120
+E K+ +S + + P +++ ++L+ GK + + +G + + +KL
Sbjct: 77 LENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLS 136
Query: 121 TFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIF 180
YT C ++ A +FDE+ W L A+ G ++ +F +M G++ + +
Sbjct: 137 LMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 181 VIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEM 240
V K+ L + GE++H +LK FG V +SL+ Y K V+ A+KVFDEM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 241 VEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVT------------------ 282
E+D+++ N++++GYV GLA + L++ ++ ++ ++ T
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 283 -----------------WNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGL 325
NTL+ +SK GD +F+ M + VVS+TS+I+G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGY 372
Query: 326 VHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDL 385
EA F+EM +G P T++++L CA + GK +H + D+
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 386 HVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEER 445
V +AL+DMYAKCG + EA +F +M ++ ++WN++I G + + Y +EA+ LFN + E
Sbjct: 433 FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Query: 446 KKL--DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYA-CMVDLLGRAGRL 502
K+ D + VL AC + + G+ + + R H A +VD+ + G L
Sbjct: 493 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL 550
Query: 503 AEAYEMIKTMSTEPDLFVWGALLGACKNHG 532
A+ + ++++ DL W ++ HG
Sbjct: 551 LLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 133/258 (51%), Gaps = 12/258 (4%)
Query: 76 LSPAAYS--ERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHAR 133
+SP Y+ + R R L GK +H + + L ++ L+ Y +C ++ A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 134 MLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIF-----VIPSVLKA 188
++F E+ +I W + G Y++ Y EA+++F+ + L++ F + VL A
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL----LEEKRFSPDERTVACVLPA 508
Query: 189 CGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAM 248
C LS G +IH ++++ + +D V +SL+DMY+KCG++ A +FD++ KD+V+
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 249 NAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRA 308
M++GY G EA+ L ++ ++ + +++ +L+ S SG + F +MR
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 309 K-GVEPDVVSWTSVISGL 325
+ +EP V + ++ L
Sbjct: 629 ECKIEPTVEHYACIVDML 646
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 271/506 (53%), Gaps = 41/506 (8%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
G LH ++VSG+ I L++ Y++C A LF + + + W + Y +
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
G +E++T F+EM G+ + S+L + ++ ++IH +++HS D F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRV 276
S+LID Y KC V A+ +F + D+V AM+SGY+ GL ++L + + ++
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 277 KPNVVTWNTL-----------------------------------ISGFSKSGDQVMVSK 301
PN +T ++ I ++K G + +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 302 LFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACA 361
+F+ + + D+VSW S+I+ + A D F++M G C +IS+ L ACA
Sbjct: 498 IFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 362 SAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNS 421
+ + GK IHG I + D++ S L+DMYAKCG + A +F M E+N V+WNS
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 422 MIFGCANHGYCDEAIELFNQMEERKKL--DHLSFTAVLTACCHVGLVELGQRLFNMMQEK 479
+I C NHG +++ LF++M E+ + D ++F ++++CCHVG V+ G R F M E
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 480 YKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEI 539
Y I P+ EHYAC+VDL GRAGRL EAYE +K+M PD VWG LLGAC+ H N+ELAE+
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEV 733
Query: 540 AAKHLSELEPESAANNMLLTDLYANA 565
A+ L +L+P ++ +L+++ +ANA
Sbjct: 734 ASSKLMDLDPSNSGYYVLISNAHANA 759
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 217/453 (47%), Gaps = 34/453 (7%)
Query: 115 IATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQG 174
+A+ LI Y E I LFD + + + W + YA+ G + F M +
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 175 LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAK 234
+ N VL C I G ++H LV+ + + +SL+ MYSKCG + A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 235 KVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSK-- 292
K+F M D V N M+SGYVQ GL E+L E+ + V P+ +T+++L+ SK
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 293 -----------------SGDQVMVSKLFQ-LMRAKGV-----------EPDVVSWTSVIS 323
S D + S L + +GV DVV +T++IS
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 324 GLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEG 383
G +HN ++ + F+ ++ P T+ SILP ++ G+E+HG I G +
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 384 DLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME 443
++ A++DMYAKCG ++ A +F+++S+R+ V+WNSMI CA AI++F QM
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG 534
Query: 444 ERKK-LDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRL 502
D +S +A L+AC ++ G+ + M K+ + + ++D+ + G L
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNL 593
Query: 503 AEAYEMIKTMSTEPDLFVWGALLGACKNHGNIE 535
A + KTM E ++ W +++ AC NHG ++
Sbjct: 594 KAAMNVFKTM-KEKNIVSWNSIIAACGNHGKLK 625
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 226/478 (47%), Gaps = 44/478 (9%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFD--EIPKTNIHRWIALT 151
L+ GK +HA LIV+ ++ + +++ Y C + +F ++ +++I W ++
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
++ R G +A+ + +M G+ ++ P ++KAC L + + + V
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD 170
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ FV SSLI Y + G ++ K+FD +++KD V N M++GY + G + +
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 272 GTPRVKPNVVTW-----------------------------------NTLISGFSKSGDQ 296
++ PN VT+ N+L+S +SK G
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 297 VMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSI 356
SKLF++M D V+W +ISG V + +E+ F EM+S G P + T SS+
Sbjct: 291 DDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 357 LPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNT 416
LP+ + N+ K+IH + + D+ + SAL+D Y KC +S A+ +F + + +
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 417 VTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNM 475
V + +MI G ++G +++E+F + + K + ++ ++L + ++LG+ L
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 476 MQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGN 533
+ +K R ++D+ + GR+ AYE+ + +S D+ W +++ C N
Sbjct: 467 IIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDN 522
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 5/270 (1%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL+ G+ LH +I G I +I Y +C ++ A +F+ + K +I W ++
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
A+ A+ +F +M + G+ + I + L AC +L G+ IH ++KHS +
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE-I 271
D + S+LIDMY+KCG+++ A VF M EK+IV+ N++++ G ++L L E +
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAK-GVEPDVVSWTSVISGLVHNFC 330
++P+ +T+ +IS GD + F+ M G++P + V+
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPAC 360
EA++T K M F P + ++L AC
Sbjct: 696 LTEAYETVKSM---PFPPDAGVWGTLLGAC 722
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 42/313 (13%)
Query: 185 VLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFD--EMVE 242
+L+AC + + + G+++H+ ++ +S D++ ++ MY+ CGS K+F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 243 KDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTW------------------- 283
I N+++S +V+ GL +AL ++ V P+V T+
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 284 ----------------NTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVH 327
++LI + + G + SKLF + ++ D V W +++G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD----RVLQKDCVIWNVMLNGYAK 216
Query: 328 NFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHV 387
D F M P + T +L CAS + G ++HG +V GV+ + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 388 RSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERKK 447
+++L+ MY+KCG +A LF MS +TVTWN MI G G +E++ F +M
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 448 L-DHLSFTAVLTA 459
L D ++F+++L +
Sbjct: 337 LPDAITFSSLLPS 349
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 163/374 (43%), Gaps = 42/374 (11%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L+ K +H ++ ++ + + LI Y +C+ + A+ +F + ++ + A+
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y G + +++ +F + + N + S+L G L + G ++H ++K F
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
+ ++IDMY+KCG + A ++F+ + ++DIV+ N+M++ Q + A+++ ++G
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 274 PRV-----------------------------------KPNVVTWNTLISGFSKSGDQVM 298
+ +V + +TLI ++K G+
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 299 VSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQ-GFCPTSATISSIL 357
+F+ M+ E ++VSW S+I+ ++ ++ F EM+ + G P T I+
Sbjct: 596 AMNVFKTMK----EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 358 PACASAANMRRG-KEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMS-ERN 415
+C ++ G + G++ + +VD++ + G ++EA M +
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD 711
Query: 416 TVTWNSMIFGCANH 429
W +++ C H
Sbjct: 712 AGVWGTLLGACRLH 725
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 353 ISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMS 412
+S +L AC++ +R+GK++H IV + GD + ++ MYA CG S+ +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 413 ERNTV--TWNSMIFGCANHGYCDEAIELFNQM 442
R + WNS+I +G ++A+ + +M
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKM 129
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 285/510 (55%), Gaps = 40/510 (7%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R + G +H + G +A LI Y+ + + +AR+LFDE+P ++ W A+
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLK-QNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSF 210
Y + G +EA+T+ + GL+ + + S+L AC D G IHS +KH
Sbjct: 224 SGYCQSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 211 GTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
++ FV + LID+Y++ G + +KVFD M +D+++ N+++ Y A++L +E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 271 IGTPRVKPNVVTWNTLISGFSKSGD---------------------------QVMVSKLF 303
+ R++P+ +T +L S S+ GD VM +KL
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 304 QLMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQG-FCPTSATISSIL 357
+ A+ V DV+SW ++ISG N EA + + M +G T S+L
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 358 PACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTV 417
PAC+ A +R+G ++HG + G+ D+ V ++L DMY KCG + +A +LF ++ N+V
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 418 TWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMM 476
WN++I HG+ ++A+ LF +M +E K DH++F +L+AC H GLV+ GQ F MM
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 477 QEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIEL 536
Q Y I P +HY CMVD+ GRAG+L A + IK+MS +PD +WGALL AC+ HGN++L
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 638
Query: 537 AEIAAKHLSELEPESAANNMLLTDLYANAG 566
+IA++HL E+EPE ++LL+++YA+AG
Sbjct: 639 GKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 233/493 (47%), Gaps = 58/493 (11%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
LQS K LHA+L+VS + I+ KL+ Y N+ AR FD I +++ W +
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 154 YARRGYHQEAVTVFHE-MHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
Y R G E + F M GL + PSVLKAC + D G KIH L LK F
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
D +V +SLI +YS+ +V A+ +FDEM +D+ + NAM+SGY Q G A EAL L +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 273 TPRVKPNVVTWNTLISGFSKSGD------------------QVMVS-------------- 300
+ VT +L+S +++GD ++ VS
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 301 ---KLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSIL 357
K+F M + D++SW S+I N A F+EM P T+ S+
Sbjct: 300 DCQKVFDRMYVR----DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 358 PACASAANMRRGKEIHGCAIVMG-VEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNT 416
+ ++R + + G + G D+ + +A+V MYAK G + AR +F+ + +
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 417 VTWNSMIFGCANHGYCDEAIELFNQMEERKKL--DHLSFTAVLTACCHVGLVELGQRLFN 474
++WN++I G A +G+ EAIE++N MEE ++ + ++ +VL AC G + G +L
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 475 MMQEKYKIMPRTEHYACMVDLLGRAGRLAEA---YEMIKTMSTEPDLFVWGALLGACKNH 531
+ K + + D+ G+ GRL +A + I +++ P W L+ H
Sbjct: 476 RLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP----WNTLIACHGFH 530
Query: 532 GNIELAEIAAKHL 544
G+ E A + K +
Sbjct: 531 GHGEKAVMLFKEM 543
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 7/175 (4%)
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
N++ K +H +V ++ + + LV++Y G ++ AR FD + R+ WN MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 425 GCANHGYCDEAIELFNQMEERKKL--DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKI 482
G G E I F+ L D+ +F +VL AC V + + + K+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV----IDGNKIHCLALKFGF 181
Query: 483 MPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
M A ++ L R + A + M D+ W A++ GN + A
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEA 235
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 293/570 (51%), Gaps = 101/570 (17%)
Query: 98 KILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARR 157
+ +HA +I SG + I +LI Y++C ++ R +FD++P+ NI+ W ++ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 158 GYHQEAVTVFHEM-------------------------------HIQGLKQNIFVIPSVL 186
G+ EA ++F M H +G N + SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 187 KACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIV 246
AC L+D+ G ++HSL+ K F +D ++ S+L+DMYSKCG+V A++VFDEM ++++V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 247 AMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS--------------- 291
+ N++++ + Q G A EAL++ + + RV+P+ VT ++IS +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 292 ----KSGDQVMVSKLFQLMRAKGVE-------------PDVVSWTSVIS----------- 323
K + +++S F M AK +V++ TS+IS
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 324 --------------------GLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASA 363
G N N+EA F + + CPT + ++IL ACA
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 364 ANMRRGKEI------HGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTV 417
A + G + HG G E D+ V ++L+DMY KCG + E +F KM ER+ V
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 418 TWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMM 476
+WN+MI G A +GY +EA+ELF +M E +K DH++ VL+AC H G VE G+ F+ M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 477 QEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIEL 536
+ + P +HY CMVDLLGRAG L EA MI+ M +PD +WG+LL ACK H NI L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 537 AEIAAKHLSELEPESAANNMLLTDLYANAG 566
+ A+ L E+EP ++ +LL+++YA G
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 19/294 (6%)
Query: 91 DRALQSGKILHAQLIVSGLARLTQIA-TKLITFYTECQNIHHARMLFDEIPKTNIHRWIA 149
D + +I A+ I + IA T +I+ Y + AR++F ++ + N+ W A
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 150 LTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS 209
L Y + G ++EA+++F + + + + ++LKAC L+++ G + H VLKH
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 210 FG------TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATE 263
F D FV +SLIDMY KCG VE+ VF +M+E+D V+ NAM+ G+ Q G E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 264 ALNLVEEIGTPRVKPNVVTWNTLIS-----GFSKSGDQVMVSKLFQLMRAKGVEPDVVSW 318
AL L E+ KP+ +T ++S GF + G S + R GV P +
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS----MTRDFGVAPLRDHY 532
Query: 319 TSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEI 372
T ++ L +EA +EM Q P S S+L AC N+ GK +
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQ---PDSVIWGSLLAACKVHRNITLGKYV 583
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 280/476 (58%), Gaps = 11/476 (2%)
Query: 94 LQSGKILHAQLIVSGLARLTQIA-TKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
L++GK A + G+A ++ + ++ Y + I AR LFD + + N+ W A+
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 153 AYARRGYHQEAVTVFHEMHIQG-LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y + G+ ++ +F M +G +K N + + KAC G +IH LV +
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE 307
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
D F+ +SL+ MYSK G + +AK VF M KD V+ N++++G VQR +EA L E++
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCN 331
++V+W +I GFS G+ +LF +M E D ++WT++IS V N
Sbjct: 368 PGK----DMVSWTDMIKGFSGKGEISKCVELFGMMP----EKDNITWTAMISAFVSNGYY 419
Query: 332 DEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSAL 391
+EA F +ML + CP S T SS+L A AS A++ G +IHG + M + DL V+++L
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 392 VDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEER-KKLDH 450
V MY KCG ++A +F +SE N V++N+MI G + +G+ +A++LF+ +E K+ +
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNG 539
Query: 451 LSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIK 510
++F A+L+AC HVG V+LG + F M+ Y I P +HYACMVDLLGR+G L +A +I
Sbjct: 540 VTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS 599
Query: 511 TMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
TM +P VWG+LL A K H ++LAE+AAK L ELEP+SA ++L+ LY+ G
Sbjct: 600 TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 178/358 (49%), Gaps = 21/358 (5%)
Query: 128 NIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLK 187
N+ A +F ++ +I WIA+ AYA G +A VF EM ++ +I +++K
Sbjct: 65 NLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIK 124
Query: 188 ACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEK--DI 245
+ D+G ++ + + +A +++I + + G ++A+ ++ E K D
Sbjct: 125 ---NKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDS 177
Query: 246 VAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQL 305
VA N ++SGY++ G EA+ + + + VV+ ++++ G+ K G V LF
Sbjct: 178 VASNVLLSGYLRAGKWNEAVRVFQGMAVKE----VVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 306 MRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCP-TSATISSILPACASAA 364
M E +V++WT++I G ++ F F M +G S T++ + AC
Sbjct: 234 M----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
R G +IHG M +E DL + ++L+ MY+K G++ EA+ +F M +++V+WNS+I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 425 GCANHGYCDEAIELFNQMEERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKI 482
G EA ELF +M + D +S+T ++ G + LF MM EK I
Sbjct: 350 GLVQRKQISEAYELFEKMPGK---DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI 404
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 264/451 (58%), Gaps = 5/451 (1%)
Query: 119 LITFYTECQNIHHARMLFDEIP----KTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQG 174
+++ YT+ + A L DE+ K +I W +L YA +G ++A+ V M I G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 175 LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAK 234
LK + I S+L+A + G+ IH +L++ D +V ++LIDMY K G + A+
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 235 KVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSG 294
VFD M K+IVA N++VSG L +A L+ + +KP+ +TWN+L SG++ G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 295 DQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATIS 354
+ M+ KGV P+VVSWT++ SG N A F +M +G P +AT+S
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 355 SILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSER 414
++L + + GKE+HG + + D +V +ALVDMY K G + A +F + +
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK 460
Query: 415 NTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLF 473
+ +WN M+ G A G +E I F+ M E + D ++FT+VL+ C + GLV+ G + F
Sbjct: 461 SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF 520
Query: 474 NMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGN 533
++M+ +Y I+P EH +CMVDLLGR+G L EA++ I+TMS +PD +WGA L +CK H +
Sbjct: 521 DLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRD 580
Query: 534 IELAEIAAKHLSELEPESAANNMLLTDLYAN 564
+ELAEIA K L LEP ++AN M++ +LY+N
Sbjct: 581 LELAEIAWKRLQVLEPHNSANYMMMINLYSN 611
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 207/421 (49%), Gaps = 38/421 (9%)
Query: 97 GKILHAQLIVSGLARL-TQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYA 155
G +H LI GL T++ + + FY C ++ A LFDE+PK + W +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 156 RRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAF 215
R G ++AV +F EM G K + +L+ C + G +IH VL+ ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 216 VVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPR 275
+ +SLI MYS+ G +E ++KVF+ M ++++ + N+++S Y + G +A+ L++E+
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 276 VKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAF 335
+KP++VTWN+L+SG++ +KG+ D ++
Sbjct: 186 LKPDIVTWNSLLSGYA----------------SKGLSKDAIA------------------ 211
Query: 336 DTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMY 395
K M G P++++ISS+L A A +++ GK IHG + + D++V + L+DMY
Sbjct: 212 -VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 396 AKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFT 454
K G++ AR +FD M +N V WNS++ G + +A L +ME E K D +++
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 455 AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMST 514
++ + +G E + M+EK + P + + + G A ++ M
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 515 E 515
E
Sbjct: 390 E 390
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 74/338 (21%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIH-------- 145
L+ GK +H ++ + L + T LI Y + + +ARM+FD + NI
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 146 ---------------------------RWIALTGAYARRGYHQEAVTVFHEMHIQGLKQN 178
W +L YA G ++A+ V +M +G+ N
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 179 IF-----------------------------------VIPSVLKACGHLSDIGTGEKIHS 203
+ + ++LK G LS + +G+++H
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
Query: 204 LVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATE 263
L+ + DA+V ++L+DMY K G ++ A ++F + K + + N M+ GY G E
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEE 480
Query: 264 ALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAK-GVEPDVVSWTSVI 322
+ + ++P+ +T+ +++S SG K F LMR++ G+ P + + ++
Sbjct: 481 GIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMV 540
Query: 323 SGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
L + DEA+D + M P + + L +C
Sbjct: 541 DLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSSC 575
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 315 bits (806), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 277/478 (57%), Gaps = 11/478 (2%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
+++ + +H+++I+ L + + KL+ Y +++ AR +FDEIP+ N+ + +
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y G++ E V VF M ++ + + P VLKAC I G KIH K +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
FV + L+ MY KCG + +A+ V DEM +D+V+ N++V GY Q +AL + E+ +
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 274 PRVKPNVVTWNTLISGFSKSG-DQVM-VSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCN 331
++ + T +L+ S + + VM V +F M K + VSW +I + N
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL----VSWNVMIGVYMKNAMP 290
Query: 332 DEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSAL 391
EA + + M + GF P + +I+S+LPAC + + GK+IHG + +L + +AL
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 392 VDMYAKCGFISEARTLFDKMSERNTVTWNSMI--FGCANHGYCDEAIELFNQMEERKKL- 448
+DMYAKCG + +AR +F+ M R+ V+W +MI +G + G CD A+ LF+++++ +
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG-CD-AVALFSKLQDSGLVP 408
Query: 449 DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEM 508
D ++F L AC H GL+E G+ F +M + YKI PR EH ACMVDLLGRAG++ EAY
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 509 IKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
I+ MS EP+ VWGALLGAC+ H + ++ +AA L +L PE + +LL+++YA AG
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 174/391 (44%), Gaps = 70/391 (17%)
Query: 169 EMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCG 228
E+ + ++ +F++ VL DI T +HS ++ ++ + L+ Y+
Sbjct: 32 ELDQKSPQETVFLLGQVLDT---YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLK 88
Query: 229 SVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIS 288
V A+KVFDE+ E++++ +N M+ YV G E + + + V+P+ T+ ++
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 289 GFSKSGDQV-------------MVSKLF------------------QLMRAKGVEPDVVS 317
S SG V + S LF +L+ + DVVS
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 318 WTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAI 377
W S++ G N D+A + +EM S + T++S+LPA ++
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT------------- 255
Query: 378 VMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIE 437
E ++V+ +F KM +++ V+WN MI + EA+E
Sbjct: 256 ---TENVMYVKD-----------------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 438 LFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLL 496
L+++ME + + D +S T+VL AC + LG+++ ++ K K++P ++D+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMY 354
Query: 497 GRAGRLAEAYEMIKTMSTEPDLFVWGALLGA 527
+ G L +A ++ + M + D+ W A++ A
Sbjct: 355 AKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 17/275 (6%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL GK +H + L + LI Y +C + AR +F+ + ++ W A+
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
AY G +AV +F ++ GL + + L AC H + G L+ H T
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 213 DAFV-VSSLIDMYSKCGSVEKAKKVFDEM-VEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
++ ++D+ + G V++A + +M +E + A++ R + + L+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC--RVHSDTDIGLLAA 501
Query: 271 IGTPRVKPNVVTWNTLISG-FSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNF 329
++ P + L+S ++K+G V+ + +M++KG++ + + ++ ++H F
Sbjct: 502 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561
Query: 330 C--------NDEAFDTF----KEMLSQGFCPTSAT 352
+DE + K+M G+ P S +
Sbjct: 562 LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSES 596
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 290/535 (54%), Gaps = 36/535 (6%)
Query: 67 MPIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTEC 126
M + S +++ ++ + L+ G H+ +I LA+ + L+ Y +C
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 127 QNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVL 186
+ AR +F+ + + W + G+Y + EA +F M++ G+ + + S L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 187 KACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIV 246
KAC H+ + G+++H L +K D SSLIDMYSKCG ++ A+KVF + E +V
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 247 AMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIS------------------ 288
+MNA+++GY Q L EA+ L +E+ T V P+ +T+ T++
Sbjct: 597 SMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 289 ---GFSKSGDQVMVSKLFQLMRAKGVE------------PDVVSWTSVISGLVHNFCNDE 333
GFS G+ + +S L M ++G+ +V WT ++SG N +E
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 334 AFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVD 393
A +KEM G P AT ++L C+ +++R G+ IH + + D + L+D
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 394 MYAKCGFISEARTLFDKMSER-NTVTWNSMIFGCANHGYCDEAIELFNQMEERKKL-DHL 451
MYAKCG + + +FD+M R N V+WNS+I G A +GY ++A+++F+ M + + D +
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEI 835
Query: 452 SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKT 511
+F VLTAC H G V G+++F MM +Y I R +H ACMVDLLGR G L EA + I+
Sbjct: 836 TFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA 895
Query: 512 MSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
+ +PD +W +LLGAC+ HG+ EI+A+ L ELEP++++ +LL+++YA+ G
Sbjct: 896 QNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQG 950
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 225/436 (51%), Gaps = 8/436 (1%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL+ GK +H++ ++ G+ ++ ++ Y +C + +A FD + K ++ W ++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
Y+ G + + F + + N F VL C +++ G +IH ++K
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
+++ +L+DMY+KC + A++VF+ +V+ + V + SGYV+ GL EA+ + E +
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 273 TPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCND 332
+P+ + + T+I+ + + G LF M + PDVV+W +ISG C
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCET 309
Query: 333 EAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALV 392
A + F M T +T+ S+L A AN+ G +H AI +G+ +++V S+LV
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 393 DMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHL 451
MY+KC + A +F+ + E+N V WN+MI G A++G + +ELF M+ +D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 452 SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKT 511
+FT++L+ C +E+G + +++ +K K+ +VD+ + G L +A ++ +
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 512 MSTEPDLFVWGALLGA 527
M + D W ++G+
Sbjct: 489 M-CDRDNVTWNTIIGS 503
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 39/454 (8%)
Query: 119 LITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQN 178
+I Y + AR+LF E+ ++ W + + +RG A+ F M +K
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 179 IFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFD 238
+ SVL A G ++++ G +H+ +K ++ +V SSL+ MYSKC +E A KVF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 239 EMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVM 298
+ EK+ V NAM+ GY G + + + L ++ + + T+ +L+S + S D M
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 299 VSKLFQLMRAKGV-------------------------------EPDVVSWTSVISGLVH 327
S+ ++ K + + D V+W ++I V
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 328 NFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHV 387
+ EAFD FK M G A ++S L AC + +GK++H ++ G++ DLH
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 388 RSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK- 446
S+L+DMY+KCG I +AR +F + E + V+ N++I G + + +EA+ LF +M R
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGV 625
Query: 447 KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLG---RAGRLA 503
++F ++ AC + LG + F+ K E+ + LLG + +
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMT 682
Query: 504 EAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
EA + +S+ + +W ++ +G E A
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 230/487 (47%), Gaps = 54/487 (11%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L G ++HA+ I GLA + + L++ Y++C+ + A +F+ + + N W A+
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
YA G + + +F +M G + F S+L C D+ G + HS+++K +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
FV ++L+DMY+KCG++E A+++F+ M ++D V N ++ YVQ +EA +L + +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 274 PRV-----------------------------------KPNVVTWNTLISGFSKSGDQVM 298
+ ++ T ++LI +SK G
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 299 VSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILP 358
K+F + E VVS ++I+G N +EA F+EML++G P+ T ++I+
Sbjct: 583 ARKVFSSLP----EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 359 ACASAANMRRGKEIHGCAIVMGV--EGDLHVRSALVDMYAKCGFISEARTLFDKMSE-RN 415
AC ++ G + HG G EG+ ++ +L+ MY ++EA LF ++S ++
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGE-YLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 416 TVTWNSMIFGCANHGYCDEAIELFNQMEERKKL-DHLSFTAVLTACCHVGLVELGQR--- 471
V W M+ G + +G+ +EA++ + +M L D +F VL C + + G+
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 472 -LFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKN 530
+F++ + ++ T ++D+ + G + + ++ M ++ W +L+
Sbjct: 757 LIFHLAHDLDELTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 531 HGNIELA 537
+G E A
Sbjct: 812 NGYAEDA 818
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 29/311 (9%)
Query: 232 KAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTP-RVKPNVVTWNTLISGF 290
K++KVFDEM ++ +A+ G A + +L+ I + R+ N ++ +
Sbjct: 60 KSRKVFDEMPQRLALALRI--------GKAVHSKSLILGIDSEGRLG------NAIVDLY 105
Query: 291 SKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTS 350
+K K F + E DV +W S++S + +F + P
Sbjct: 106 AKCAQVSYAEKQFDFL-----EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK 160
Query: 351 ATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDK 410
T S +L CA N+ G++IH I MG+E + + ALVDMYAKC IS+AR +F+
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW 220
Query: 411 MSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELG 469
+ + NTV W + G G +EA+ +F +M +E + DHL+F V+ +G ++
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 470 QRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTM---STEPDLFVWGALLG 526
+ LF M P + M+ G+ G A E M S + G++L
Sbjct: 281 RLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 527 ACKNHGNIELA 537
A N++L
Sbjct: 336 AIGIVANLDLG 346
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 263/510 (51%), Gaps = 71/510 (13%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIP------------ 140
A + GK +H VSGL + + Y C + AR +FD +
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 141 -----------------------KTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQ 177
+ NI W + + R GYH+EAV +F ++H G
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 178 NIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVF 237
+ + SVL + G + G IH V+K D V+S++IDMY K G V +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 238 DEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQV 297
++ + NA ++G + GL +AL
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKAL-------------------------------- 338
Query: 298 MVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSIL 357
++F+L + + +E +VVSWTS+I+G N + EA + F+EM G P TI S+L
Sbjct: 339 ---EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 358 PACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTV 417
PAC + A + G+ HG A+ + + ++HV SAL+DMYAKCG I+ ++ +F+ M +N V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 418 TWNSMIFGCANHGYCDEAIELFNQ-MEERKKLDHLSFTAVLTACCHVGLVELGQRLFNMM 476
WNS++ G + HG E + +F M R K D +SFT++L+AC VGL + G + F MM
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 477 QEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIEL 536
E+Y I PR EHY+CMV+LLGRAG+L EAY++IK M EPD VWGALL +C+ N++L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 537 AEIAAKHLSELEPESAANNMLLTDLYANAG 566
AEIAA+ L LEPE+ +LL+++YA G
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKG 605
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 213/468 (45%), Gaps = 73/468 (15%)
Query: 101 HAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYH 160
HA+++ SG I+ KLI Y+ + A ++ IP I+ + +L A +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 161 QEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSL 220
+++ VF M GL + V+P++ K C LS G++IH + DAFV S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 221 IDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNV 280
MY +CG + A+KVFD M +KD+V +A++ Y ++G E + ++ E+ + ++ N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 281 VTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKE 340
V+WN ++SGF++SG +FQ + G PD V
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV------------------------ 253
Query: 341 MLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGF 400
T+SS+LP+ + + G+ IHG I G+ D V SA++DMY K G
Sbjct: 254 -----------TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 401 ISEARTLFDKMS-----------------------------------ERNTVTWNSMIFG 425
+ +LF++ E N V+W S+I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 426 CANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMP 484
CA +G EA+ELF +M+ K +H++ ++L AC ++ + G R + + ++
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-RSTHGFAVRVHLLD 421
Query: 485 RTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHG 532
+ ++D+ + GR+ + + M T+ +L W +L+ HG
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 309 bits (792), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 279/508 (54%), Gaps = 40/508 (7%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L+ GK +H L+ SG + T L Y +C+ ++ AR +FD +P+ ++ W +
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y++ G + A+ + M + LK + I SVL A L I G++IH ++ F +
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
+ ++L+DMY+KCGS+E A+++FD M+E+++V+ N+M+ YVQ EA+ + +++
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 274 PRVKP-----------------------------------NVVTWNTLISGFSKSGDQVM 298
VKP NV N+LIS + K +
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 299 VSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILP 358
+ +F ++++ +VSW ++I G N +A + F +M S+ P + T S++
Sbjct: 391 AASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 359 ACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVT 418
A A + K IHG + ++ ++ V +ALVDMYAKCG I AR +FD MSER+ T
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 419 WNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQ 477
WN+MI G HG+ A+ELF +M++ K + ++F +V++AC H GLVE G + F MM+
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 478 EKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
E Y I +HY MVDLLGRAGRL EA++ I M +P + V+GA+LGAC+ H N+ A
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 538 EIAAKHLSELEPESAANNMLLTDLYANA 565
E AA+ L EL P+ ++LL ++Y A
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAA 654
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 227/463 (49%), Gaps = 44/463 (9%)
Query: 107 SGLARLTQIATKLITFYTECQNIHHARMLFDEI-PKTNIHRWIALTGAYARRGYHQEAVT 165
+GL + TKL++ + ++ A +F+ I K N+ L G +A+ +A+
Sbjct: 63 NGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG-FAKVSDLDKALQ 121
Query: 166 VFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYS 225
F M ++ ++ +LK CG +++ G++IH L++K F D F ++ L +MY+
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 226 KCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTW-- 283
KC V +A+KVFD M E+D+V+ N +V+GY Q G+A AL +V+ + +KP+ +T
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 284 ---------------------------------NTLISGFSKSGDQVMVSKLFQLMRAKG 310
L+ ++K G +LF M
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM---- 297
Query: 311 VEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGK 370
+E +VVSW S+I V N EA F++ML +G PT ++ L ACA ++ RG+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 371 EIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHG 430
IH ++ +G++ ++ V ++L+ MY KC + A ++F K+ R V+WN+MI G A +G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 431 YCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHY 489
+A+ F+QM R K D ++ +V+TA + + + + ++ + +
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM-RSCLDKNVFVT 476
Query: 490 ACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHG 532
+VD+ + G + A +I M +E + W A++ HG
Sbjct: 477 TALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 49/379 (12%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R + GK +H + SG L I+T L+ Y +C ++ AR LFD + + N+ W ++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
AY + +EA+ +F +M +G+K + L AC L D+ G IH L ++
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ VV+SLI MY KC V+ A +F ++ + +V+ NAM+ G+ Q G +ALN ++
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 272 GTPRVKPNVVTWNTLISG-----------------------------------FSKSGDQ 296
+ VKP+ T+ ++I+ ++K G
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 297 VMVSKLFQLMRAKGVEPDVVSWTSVISGL-VHNFCNDEAFDTFKEMLSQGFCPTSATISS 355
++ +F +M E V +W ++I G H F A + F+EM P T S
Sbjct: 490 MIARLIFDMMS----ERHVTTWNAMIDGYGTHGF-GKAALELFEEMQKGTIKPNGVTFLS 544
Query: 356 ILPACASAANMRRGKEIHGCAIVM----GVEGDLHVRSALVDMYAKCGFISEARTLFDKM 411
++ AC+ + + G + C +M +E + A+VD+ + G ++EA +M
Sbjct: 545 VISACSHSGLVEAGLK---CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 412 SERNTVT-WNSMIFGCANH 429
+ V + +M+ C H
Sbjct: 602 PVKPAVNVYGAMLGACQIH 620
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 37/327 (11%)
Query: 178 NIFVIPS--VLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKK 235
N++ P+ +L+ C L ++ +I LV K+ + F + L+ ++ + GSV++A +
Sbjct: 34 NVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAAR 90
Query: 236 VFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLI-------- 287
VF+ + K V + M+ G+ + +AL + V+P V + L+
Sbjct: 91 VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 150
Query: 288 -------------SGFS-----KSGDQVMVSKLFQLMRAKGV-----EPDVVSWTSVISG 324
SGFS +G + M +K Q+ A+ V E D+VSW ++++G
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 325 LVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGD 384
N A + K M + P+ TI S+LPA ++ + GKEIHG A+ G +
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 385 LHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-E 443
+++ +ALVDMYAKCG + AR LFD M ERN V+WNSMI + EA+ +F +M +
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 444 ERKKLDHLSFTAVLTACCHVGLVELGQ 470
E K +S L AC +G +E G+
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGR 357
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 308 bits (788), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 293/529 (55%), Gaps = 32/529 (6%)
Query: 67 MPIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTEC 126
+P+ + S+ S + ER++ + L K LHAQ+I L IA KLI+ + C
Sbjct: 5 LPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLC 64
Query: 127 QNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVL 186
+ + A +F+++ + N+H +L A+A+ +A VF EM GL + F P +L
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 187 KACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGS--VEKAKKVFDEMVEKD 244
KAC S + + +H+ + K +D +V ++LID YS+CG V A K+F++M E+D
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 245 IVAMNAMVSGYVQRGLATEALNLVEEI-------------GTPRVKP------------- 278
V+ N+M+ G V+ G +A L +E+ G R +
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 279 -NVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDT 337
N V+W+T++ G+SK+GD M +F M +VV+WT +I+G EA
Sbjct: 245 RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 338 FKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAK 397
+M++ G +A + SIL AC + + G IH + + +V +AL+DMYAK
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 398 CGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTAV 456
CG + +A +F+ + +++ V+WN+M+ G HG+ EAIELF++M E + D ++F AV
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 457 LTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEP 516
L +C H GL++ G F M++ Y ++P+ EHY C+VDLLGR GRL EA ++++TM EP
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 517 DLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANA 565
++ +WGALLGAC+ H +++A+ +L +L+P N LL+++YA A
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 293/540 (54%), Gaps = 44/540 (8%)
Query: 67 MPIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTEC 126
M ++S ++ LSP+ Y + +++ + ++H I +G Q+ LI Y +
Sbjct: 2 MLVVSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQ 61
Query: 127 QNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVL 186
++ HAR LFD I K ++ W A+ ++R GYH +A+ +F EMH + +K N F SVL
Sbjct: 62 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 121
Query: 187 KACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIV 246
K+C L + G +IH V K + + V S+L+ +Y++CG +E+A+ FD M E+D+V
Sbjct: 122 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 181
Query: 247 AMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIS------------------ 288
+ NAM+ GY A + +L + + T KP+ T+ +L+
Sbjct: 182 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 241
Query: 289 ---GFSKS--------------GDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVH-NFC 330
GF +S G KL + + + D++S T++I+G N C
Sbjct: 242 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR----DLLSCTALITGFSQQNNC 297
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMG-VEGDLHVRS 389
+AFD FK+M+ +SS+L C + A++ G++IHG A+ + D+ + +
Sbjct: 298 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 357
Query: 390 ALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKL 448
+L+DMYAK G I +A F++M E++ +W S+I G HG ++AI+L+N+ME ER K
Sbjct: 358 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 417
Query: 449 DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEM 508
+ ++F ++L+AC H G ELG ++++ M K+ I R EH +C++D+L R+G L EAY +
Sbjct: 418 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 477
Query: 509 IKTMSTEPDL--FVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
I++ L WGA L AC+ HGN++L+++AA L +EP N + L +YA G
Sbjct: 478 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 537
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 276/502 (54%), Gaps = 35/502 (6%)
Query: 98 KILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARR 157
K +HA+L+V GL + TKLI + +I AR +FD++P+ I W A+ Y+R
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 158 GYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVV 217
+ Q+A+ ++ M + + + F P +LKAC LS + G +H+ V + F D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 218 SSLIDMYSKCGSVEKAKKVFD--EMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPR 275
+ LI +Y+KC + A+ VF+ + E+ IV+ A+VS Y Q G EAL + ++
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 276 VKPNVVTWNTLISGFS-----KSGDQV---------------------MVSKLFQLMRAK 309
VKP+ V ++++ F+ K G + M +K Q+ AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 310 GV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA 364
+ P+++ W ++ISG N EA D F EM+++ P + +I+S + ACA
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
++ + + ++ D+ + SAL+DM+AKCG + AR +FD+ +R+ V W++MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 425 GCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIM 483
G HG EAI L+ ME + ++F +L AC H G+V G FN M + +KI
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKIN 456
Query: 484 PRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKH 543
P+ +HYAC++DLLGRAG L +AYE+IK M +P + VWGALL ACK H ++EL E AA+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 544 LSELEPESAANNMLLTDLYANA 565
L ++P + + + L++LYA A
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAA 538
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 34/374 (9%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFD--EIPKTNIHRWIALT 151
LQ G+ +HAQ+ G + LI Y +C+ + AR +F+ +P+ I W A+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
AYA+ G EA+ +F +M +K + + SVL A L D+ G IH+ V+K
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ ++ SL MY+KCG V AK +FD+M +++ NAM+SGY + G A EA+++ E+
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 272 GTPRVKPNVVTWNTLISGFSKSG------------------DQVMVSKLFQLMRAK---- 309
V+P+ ++ + IS ++ G D V +S M AK
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 310 ---------GVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
++ DVV W+++I G + EA ++ M G P T +L AC
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 361 ASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVT-W 419
+ +R G + + ++D+ + G + +A + M + VT W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 420 NSMIFGCANHGYCD 433
+++ C H + +
Sbjct: 495 GALLSACKKHRHVE 508
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L+ G+ +HA ++ GL + L T Y +C + A++LFD++ N+ W A+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
YA+ GY +EA+ +FHEM + ++ + I S + AC + + ++ V + + D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
F+ S+LIDM++KCGSVE A+ VFD +++D+V +AM+ GY G A EA++L +
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 274 PRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDE 333
V PN VT+ L+ + SG F M + P + VI L D+
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 334 AFDTFKEMLSQGFCPTSATISSILPACASAANMRRGK 370
A++ K M Q P ++L AC ++ G+
Sbjct: 478 AYEVIKCMPVQ---PGVTVWGALLSACKKHRHVELGE 511
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 362 SAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNS 421
SA + + K+IH +V+G++ + + L+ + G I+ AR +FD + WN+
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 422 MIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQ 470
+I G + + + +A+ +++ M+ R D +F +L AC + +++G+
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 247/423 (58%), Gaps = 2/423 (0%)
Query: 143 NIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIH 202
++ W A+ G +A+ +F +M + G+ N I S + AC L I G ++H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 203 SLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLAT 262
S+ +K F D V +SL+DMYSKCG +E A+KVFD + KD+ N+M++GY Q G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 263 EALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKG-VEPDVVSWTSV 321
+A L + ++PN++TWNT+ISG+ K+GD+ LFQ M G V+ + +W +
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 322 ISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGV 381
I+G + N DEA + F++M F P S TI S+LPACA+ + +EIHGC + +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 382 EGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQ 441
+ V++AL D YAK G I +RT+F M ++ +TWNS+I G HG A+ LFNQ
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 442 MEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAG 500
M+ + + + ++++ A +G V+ G+++F + Y I+P EH + MV L GRA
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675
Query: 501 RLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTD 560
RL EA + I+ M+ + + +W + L C+ HG+I++A AA++L LEPE+ A +++
Sbjct: 676 RLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQ 735
Query: 561 LYA 563
+YA
Sbjct: 736 IYA 738
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 275/519 (52%), Gaps = 13/519 (2%)
Query: 57 NGIFIEAHYKM-PIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQI 115
NG +EA + + + + + Y + +E I ++ G+ILHA+ GL +
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTEPDV 115
Query: 116 --ATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQ 173
TKL++ Y +C I AR +FD + + N+ W A+ GAY+R +E +F M
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 174 GLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKA 233
G+ + F+ P +L+ C + D+ G+ IHS+V+K + V +S++ +Y+KCG ++ A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 234 KKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKS 293
K F M E+D++A N+++ Y Q G EA+ LV+E+ + P +VTWN LI G+++
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 294 GDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATI 353
G L Q M G+ DV +WT++ISGL+HN +A D F++M G P + TI
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 354 SSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSE 413
S + AC+ + +G E+H A+ MG D+ V ++LVDMY+KCG + +AR +FD +
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 414 RNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRL 472
++ TWNSMI G GYC +A ELF +M++ + + +++ +++ G L
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Query: 473 FNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTE---PDLFVWGALLGACK 529
F M++ K+ T + ++ + G+ EA E+ + M P+ +LL AC
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 530 N-HGNIELAEIAAKHLSE-LEPESAANNMLLTDLYANAG 566
N G + EI L L+ A N LTD YA +G
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNA-LTDTYAKSG 573
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 133 RMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHL 192
RM D + N W + Y + G EA+ +F +M N I S+L AC +L
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 193 SDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV 252
+IH VL+ + V ++L D Y+K G +E ++ +F M KDI+ N+++
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 253 SGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLI 287
GYV G AL L ++ T + PN T +++I
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 100 LHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGY 159
+H ++ L + + L Y + +I ++R +F + +I W +L G Y G
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 160 HQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVV-- 217
+ A+ +F++M QG+ N + S++ A G + ++ G+K+ +S D ++
Sbjct: 606 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-----YSIANDYHIIPA 660
Query: 218 ----SSLIDMYSKCGSVEKAKKVFDEM 240
S+++ +Y + +E+A + EM
Sbjct: 661 LEHCSAMVYLYGRANRLEEALQFIQEM 687
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 302 bits (773), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 279/512 (54%), Gaps = 44/512 (8%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L+ GK +HA ++ GL + LI Y +C + A LF+ +P NI W L
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y + H+EA+ +F M GLK +++ S+L +C L +G G ++H+ +K + G D
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATE---ALNLVEE 270
++V +SLIDMY+KC + A+KVFD D+V NAM+ GY + G E ALN+ +
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 271 IGTPRVKPNVVTWNTLIS--------GFSKSGDQVMV----------------------- 299
+ ++P+++T+ +L+ G SK +M
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 300 ---SKL-FQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISS 355
S+L F M+ K D+V W S+ +G V N+EA + F E+ P T ++
Sbjct: 505 LKDSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 356 ILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERN 415
++ A + A+++ G+E H + G+E + ++ +AL+DMYAKCG +A FD + R+
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 416 TVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFN 474
V WNS+I ANHG +A+++ +M E + ++++F VL+AC H GLVE G + F
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 475 MMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNI 534
+M ++ I P TEHY CMV LLGRAGRL +A E+I+ M T+P VW +LL C GN+
Sbjct: 681 LML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV 739
Query: 535 ELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
ELAE AA+ +P+ + + +L+++YA+ G
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKG 771
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 245/493 (49%), Gaps = 51/493 (10%)
Query: 100 LHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGY 159
L + L+ SG R + T LI FY + NI +AR++FD +P+ + W + + G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 160 HQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSS 219
++ +F+++ + + +++ +VL AC L + G++IH+ +L++ DA +++
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 220 LIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPN 279
LID Y KCG V A K+F+ M K+I++ ++SGY Q L EA+ L + +KP+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 280 V------------------------------------VTWNTLISGFSKSGDQVMVSKLF 303
+ VT N+LI ++K K+F
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT-NSLIDMYAKCDCLTDARKVF 408
Query: 304 QLMRAKGVEPDVVSWTSVISG---LVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
+ A DVV + ++I G L + EA + F++M + P+ T S+L A
Sbjct: 409 DIFAA----ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 361 ASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWN 420
AS ++ K+IHG G+ D+ SAL+D+Y+ C + ++R +FD+M ++ V WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 421 SMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQRLF-NMMQE 478
SM G +EA+ LF +++ R++ D +F ++TA ++ V+LGQ +++
Sbjct: 525 SMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 479 KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA- 537
+ P + ++D+ + G +A++ + ++ D+ W +++ + NHG + A
Sbjct: 585 GLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGEGKKAL 641
Query: 538 EIAAKHLSE-LEP 549
++ K +SE +EP
Sbjct: 642 QMLEKMMSEGIEP 654
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 227/489 (46%), Gaps = 48/489 (9%)
Query: 81 YSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIP 140
++ +++ D L ++H Q+IV GL T ++ LI Y+ + +AR +F+++P
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 141 KTNIHRWIALTGAYARRGYHQEAVTVFHEM-HIQGLKQNIFVIPSVLKACGHLSDIGTGE 199
+ N+ W + A G ++E++ VF E + N +++ S ++AC L G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 200 --KIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQ 257
++ S ++K F D +V + LID Y K G+++ A+ VFD + EK V M+SG V+
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 258 RGLATEALNLVEEIGTPRVKP-----------------------------------NVVT 282
G + +L L ++ V P +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 283 WNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEML 342
N LI + K G + KLF M K +++SWT+++SG N + EA + F M
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 343 SQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFIS 402
G P SSIL +CAS + G ++H I + D +V ++L+DMYAKC ++
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 403 EARTLFDKMSERNTVTWNSMIFGCANHGY---CDEAIELFNQMEERK-KLDHLSFTAVLT 458
+AR +FD + + V +N+MI G + G EA+ +F M R + L+F ++L
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 459 ACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDL 518
A + + L +++ +M KY + + ++D+ L ++ + M + DL
Sbjct: 463 ASASLTSLGLSKQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DL 520
Query: 519 FVWGALLGA 527
+W ++
Sbjct: 521 VIWNSMFAG 529
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 174/377 (46%), Gaps = 43/377 (11%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL G +HA I + L + + LI Y +C + AR +FD ++ + A+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 153 AYARRGYH---QEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS 209
Y+R G EA+ +F +M + ++ ++ S+L+A L+ +G ++IH L+ K+
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 210 FGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVE 269
D F S+LID+YS C ++ ++ VFDEM KD+V N+M +GYVQ+ EALNL
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 270 EIGTPRVKPNVVTW-----------------------------------NTLISGFSKSG 294
E+ R +P+ T+ N L+ ++K G
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 295 DQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATIS 354
K F DVV W SVIS ++ +A ++M+S+G P T
Sbjct: 605 SPEDAHKAFD----SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFV 660
Query: 355 SILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSER 414
+L AC+ A + G + + G+E + +V + + G +++AR L +KM +
Sbjct: 661 GVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK 720
Query: 415 -NTVTWNSMIFGCANHG 430
+ W S++ GCA G
Sbjct: 721 PAAIVWRSLLSGCAKAG 737
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 169/325 (52%), Gaps = 4/325 (1%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
+L K +H + GL + LI Y+ C + +R++FDE+ ++ W ++
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
Y ++ ++EA+ +F E+ + + + F +++ A G+L+ + G++ H +LK
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
+ ++ ++L+DMY+KCGS E A K FD +D+V N+++S Y G +AL ++E++
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 273 TPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCND 332
+ ++PN +T+ ++S S +G K F+LM G+EP+ + ++S L +
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 333 EAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALV 392
+A + ++M ++ P + S+L CA A N+ + AI+ + D + L
Sbjct: 709 KARELIEKMPTK---PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK-DSGSFTMLS 764
Query: 393 DMYAKCGFISEARTLFDKMSERNTV 417
++YA G +EA+ + ++M V
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVV 789
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 14/255 (5%)
Query: 284 NTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEML- 342
N LI+ +S++G V K+F+ M E ++VSW++++S H+ +E+ F E
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMP----ERNLVSWSTMVSACNHHGIYEESLVVFLEFWR 138
Query: 343 SQGFCPTSATISSILPACASAANMRRGK----EIHGCAIVMGVEGDLHVRSALVDMYAKC 398
++ P +SS + AC+ RG+ ++ + G + D++V + L+D Y K
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD 196
Query: 399 GFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQ-MEERKKLDHLSFTAVL 457
G I AR +FD + E++TVTW +MI GC G +++LF Q ME+ D + VL
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 458 TACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPD 517
+AC + +E G+++ + +Y + ++D + GR+ A+++ M + +
Sbjct: 257 SACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-N 314
Query: 518 LFVWGALLGACKNHG 532
+ W LL K +
Sbjct: 315 IISWTTLLSGYKQNA 329
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 282/532 (53%), Gaps = 36/532 (6%)
Query: 69 IISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLI-VSGLARLTQIATKLITFYTECQ 127
++ F +S+ ++ + L +GK +H QL+ V + + T L+ Y +C
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV--VLTGLLDMYAKCG 190
Query: 128 NIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLK 187
I A +F++I N+ W ++ Y + +E + +F+ M + N + +++
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 188 ACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVA 247
AC LS + G+ H ++K + +V+SL+DMY KCG + A++VF+E D+V
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 248 MNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS-----KSGDQV----- 297
AM+ GY G EAL+L +++ +KPN VT +++SG + G V
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 298 ---------------MVSKLFQLMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDT 337
M +K +Q AK V E D+V+W S+ISG N EA
Sbjct: 371 KVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 430
Query: 338 FKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMG--VEGDLHVRSALVDMY 395
F M S+ P T++S+ ACAS ++ G +H ++ +G +HV +AL+D Y
Sbjct: 431 FHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 490
Query: 396 AKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFT 454
AKCG AR +FD + E+NT+TW++MI G G ++ELF +M ++++K + +FT
Sbjct: 491 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 550
Query: 455 AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMST 514
++L+AC H G+V G++ F+ M + Y P T+HY CMVD+L RAG L +A ++I+ M
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI 610
Query: 515 EPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
+PD+ +GA L C H +L EI K + +L P+ A+ +L+++LYA+ G
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 38/467 (8%)
Query: 101 HAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYH 160
H L +GL IATKL++ Y AR++FD+IP+ + + W + Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 161 QEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLK-HSFGTDAFVVSS 219
E V ++ + G + + V LKAC L D+ G+KIH ++K SF D V++
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF--DNVVLTG 181
Query: 220 LIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPN 279
L+DMY+KCG ++ A KVF+++ +++V +M++GYV+ L E L L + V N
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 280 VVTWNTLISGFS----------------KSGDQV----------MVSKLFQLMRAKGV-- 311
T+ TLI + KSG ++ M K + A+ V
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 312 ---EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRR 368
D+V WT++I G HN +EA F++M P TI+S+L C N+
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 369 GKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCAN 428
G+ +HG +I +G+ D +V +ALV MYAKC +A+ +F+ SE++ V WNS+I G +
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 429 HGYCDEAIELFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTE 487
+G EA+ LF++M E + ++ ++ +AC +G + +G L + + +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 488 HYA-CMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGN 533
H ++D + G A + T+ E + W A++G G+
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGD 526
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 10/280 (3%)
Query: 265 LNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLF------QLMRAKGVEPDVVSW 318
L+ I + R V+T N L+ S + V + F +L+ + EPD W
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 319 TSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIV 378
++ N + E + ++ GF S L AC ++ GK+IH C +V
Sbjct: 111 KVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH-CQLV 169
Query: 379 MGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIEL 438
D V + L+DMYAKCG I A +F+ ++ RN V W SMI G + C+E + L
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 439 FNQMEERKKL-DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLG 497
FN+M E L + ++ ++ AC + + G + F+ K I + ++D+
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 498 RAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
+ G ++ A + S DL +W A++ ++G++ A
Sbjct: 289 KCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEA 327
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 334 AFDTFKEML----SQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRS 389
+F T KE++ + G A S + N+ ++ HG G+ GD+ + +
Sbjct: 21 SFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIAT 80
Query: 390 ALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFN-QMEERKKL 448
LV +Y G+ +AR +FD++ E + W M+ + E ++L++ M+ +
Sbjct: 81 KLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY 140
Query: 449 DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYAC--MVDLLGRAGRLAEAY 506
D + F+ L AC + ++ G+++ + + +P ++ ++D+ + G + A+
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAH 196
Query: 507 EMIKTMSTEPDLFVWGALL-GACKN 530
++ + T ++ W +++ G KN
Sbjct: 197 KVFNDI-TLRNVVCWTSMIAGYVKN 220
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 268/508 (52%), Gaps = 42/508 (8%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
G+ +H ++ GL + T L++ Y++C + A +F + + W A+ AYA
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
Y A+ +F M + + + F + +V+ C L G+ +H+ + K + + +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI--GTP 274
S+L+ +YSKCG A VF M EKD+VA +++SG + G EAL + ++
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 275 RVKP-----------------------------------NVVTWNTLISGFSKSGDQVMV 299
+KP NV ++LI +SK G M
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 300 SKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPA 359
K+F M + ++V+W S+IS N + + D F MLSQG P S +I+S+L A
Sbjct: 531 LKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 360 CASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTW 419
+S A++ +GK +HG + +G+ D H+++AL+DMY KCGF A +F KM ++ +TW
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITW 646
Query: 420 NSMIFGCANHGYCDEAIELFNQMEER-KKLDHLSFTAVLTACCHVGLVELGQRLFNMMQE 478
N MI+G +HG C A+ LF++M++ + D ++F ++++AC H G VE G+ +F M++
Sbjct: 647 NLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Query: 479 KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAE 538
Y I P EHYA MVDLLGRAG L EAY IK M E D +W LL A + H N+EL
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
Query: 539 IAAKHLSELEPESAANNMLLTDLYANAG 566
++A+ L +EPE + + L +LY AG
Sbjct: 767 LSAEKLLRMEPERGSTYVQLINLYMEAG 794
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 218/499 (43%), Gaps = 41/499 (8%)
Query: 74 FHLSPAAYSERIEIYIRDRA----LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNI 129
F + P A+S I + + + + GK +H ++ + L + + T LI Y +
Sbjct: 162 FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLS 221
Query: 130 HHARMLFDEI-PKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKA 188
A +F EI K+N+ W + + G + ++ ++ +K L A
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGA 281
Query: 189 CGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAM 248
C + G G +IH V+K D +V +SL+ MYSKCG V +A+ VF +V+K +
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 249 NAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIS-----GFSKSGDQV------ 297
NAMV+ Y + AL+L + V P+ T + +IS G G V
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 298 --------MVSKLFQLMRAKGVEP------------DVVSWTSVISGLVHNFCNDEAFDT 337
+ S L L G +P D+V+W S+ISGL N EA
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 338 FKEML--SQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMY 395
F +M P S ++S+ ACA +R G ++HG I G+ ++ V S+L+D+Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 396 AKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERKKL-DHLSFT 454
+KCG A +F MS N V WNSMI + + + +I+LFN M + D +S T
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 455 AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMST 514
+VL A + G+ L + I T ++D+ + G A + K M
Sbjct: 582 SVLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ- 639
Query: 515 EPDLFVWGALLGACKNHGN 533
L W ++ +HG+
Sbjct: 640 HKSLITWNLMIYGYGSHGD 658
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 186/396 (46%), Gaps = 45/396 (11%)
Query: 178 NIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVF 237
++F PS+LKAC L+++ G+ IH V+ + D F+ +SL++MY KCG ++ A +VF
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 238 DEMVE-------KDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGF 290
D + +D+ N+M+ GY + E + + V+P+ + + ++S
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 291 SKSG---------------------DQVMVSKLFQLMRAKGVEPD-------------VV 316
K G D + + L + G+ D VV
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 317 SWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCA 376
W +I G + + + D + + S + + L AC+ + N G++IH
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 377 IVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAI 436
+ MG+ D +V ++L+ MY+KCG + EA T+F + ++ WN+M+ A + Y A+
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 437 ELFNQMEERKKL-DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDL 495
+LF M ++ L D + + V++ C +GL G+ + + ++ I + + ++ L
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTL 417
Query: 496 LGRAGRLAEAYEMIKTMSTEPDLFVWGALL-GACKN 530
+ G +AY + K+M E D+ WG+L+ G CKN
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKN 452
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 221/486 (45%), Gaps = 49/486 (10%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKT-------NIHR 146
L GK +H ++V G IAT L+ Y +C + +A +FD ++ ++
Sbjct: 76 LSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTV 135
Query: 147 WIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIF---VIPSVLKACGHLSDIGTGEKIHS 203
W ++ Y + +E V F M + G++ + F ++ SV+ G+ G++IH
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR-EEGKQIHG 194
Query: 204 LVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEK-DIVAMNAMVSGYVQRGLAT 262
+L++S TD+F+ ++LIDMY K G A +VF E+ +K ++V N M+ G+ G+
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 263 EALNLVEEIGTPRVKPNVVTWNTLISGFSKS-----GDQV-------------------- 297
+L+L VK ++ + S+S G Q+
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 298 -MVSKLFQLMRAKGVEPDVVS-----WTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSA 351
M SK + A+ V VV W ++++ N A D F M + P S
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF 374
Query: 352 TISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKM 411
T+S+++ C+ GK +H ++ + SAL+ +Y+KCG +A +F M
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 412 SERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK---KLDHLSFTAVLTACCHVGLVEL 468
E++ V W S+I G +G EA+++F M++ K D T+V AC + +
Sbjct: 435 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 469 GQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGAC 528
G ++ M K ++ + ++DL + G A ++ +MSTE ++ W +++ +C
Sbjct: 495 GLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SC 551
Query: 529 KNHGNI 534
+ N+
Sbjct: 552 YSRNNL 557
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 157/329 (47%), Gaps = 15/329 (4%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
AL+ G +H +I +GL + + LI Y++C A +F + N+ W ++
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y+R + ++ +F+ M QG+ + I SVL A + + G+ +H L+
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 609
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+D + ++LIDMY KCG + A+ +F +M K ++ N M+ GY G AL+L +E+
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAK-GVEPDVVSWTSVISGLVHNFC 330
P+ VT+ +LIS + SG +F+ M+ G+EP++ + +++ L
Sbjct: 670 KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGL 729
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKE--IHGCAIVMGVE---GDL 385
+EA+ K M P A SSI SA+ E I ++ +E G
Sbjct: 730 LEEAYSFIKAM------PIEAD-SSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGST 782
Query: 386 HVRSALVDMYAKCGFISEARTLFDKMSER 414
+V+ L+++Y + G +EA L M E+
Sbjct: 783 YVQ--LINLYMEAGLKNEAAKLLGLMKEK 809
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 343 SQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFIS 402
S F + T S+L AC++ N+ GK IHG +V+G D + ++LV+MY KCGF+
Sbjct: 53 SSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLD 112
Query: 403 EARTLFDKMSE-------RNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFT 454
A +FD S+ R+ WNSMI G E + F +M + D S +
Sbjct: 113 YAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLS 172
Query: 455 AVLTACCHVGLV--ELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTM 512
V++ C G E G+++ M + + + ++D+ + G +A+ + +
Sbjct: 173 IVVSVMCKEGNFRREEGKQIHGFML-RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI 231
Query: 513 STEPDLFVWGALL 525
+ ++ +W ++
Sbjct: 232 EDKSNVVLWNVMI 244
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 298 bits (764), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 270/481 (56%), Gaps = 45/481 (9%)
Query: 90 RDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIA 149
R ++ K ++A +I+ GL++ + + TK++ F + +++ +A LF+++ N+ + +
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 150 LTGAYARRGYHQEAVTVFHEMHIQGLK-QNIFVIPSVLKACGHLSDIGTGEKIHSLVLKH 208
+ AY + + + ++ ++ + + + F P + K+C L G+++H + K
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK- 137
Query: 209 SFGTDAFVVS--SLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALN 266
FG VV+ +LIDMY K + A KVFDEM E+D
Sbjct: 138 -FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD---------------------- 174
Query: 267 LVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLV 326
V++WN+L+SG+++ G LF LM ++ +VSWT++ISG
Sbjct: 175 -------------VISWNSLLSGYARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYT 217
Query: 327 HNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLH 386
C EA D F+EM G P ++ S+LP+CA ++ GK IH A G
Sbjct: 218 GIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG 277
Query: 387 VRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK 446
V +AL++MY+KCG IS+A LF +M ++ ++W++MI G A HG AIE FN+M+ K
Sbjct: 278 VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK 337
Query: 447 -KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEA 505
K + ++F +L+AC HVG+ + G R F+MM++ Y+I P+ EHY C++D+L RAG+L A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 506 YEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANA 565
E+ KTM +PD +WG+LL +C+ GN+++A +A HL ELEPE N +LL ++YA+
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL 457
Query: 566 G 566
G
Sbjct: 458 G 458
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 357 LPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNT 416
+P + K+I+ I+ G+ + + +VD K + A LF+++S N
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 417 VTWNSMIFGCA-NHGYCDEAIELFNQMEERKKL---DHLSFTAVLTACCHVGLVELGQRL 472
+NS+I N YCD I ++ Q+ RK D +F + +C +G LG+++
Sbjct: 74 FLYNSIIRAYTHNSLYCD-VIRIYKQL-LRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 473 FNMMQEKYKIMPR----TEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGAC 528
+ K PR TE+ ++D+ + L +A+++ M E D+ W +LL
Sbjct: 132 HGHL---CKFGPRFHVVTEN--ALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGY 185
Query: 529 KNHGNIELAE 538
G ++ A+
Sbjct: 186 ARLGQMKKAK 195
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 272/494 (55%), Gaps = 48/494 (9%)
Query: 115 IATKLITFYTECQN-IHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQ 173
+ LI + + +N +A +FD++ + N+ W + + G+ +EA+ F +M +
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 174 GLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKC---GSV 230
G + + F + SV AC L ++ G+++HS ++ D V SL+DMY+KC GSV
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSV 321
Query: 231 EKAKKVFDEMVEKDIVAMNAMVSGYVQR-GLATEALNLVEEIGTP-RVKPNVVTW----- 283
+ +KVFD M + +++ A+++GY++ LATEA+NL E+ T V+PN T+
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 284 ------------------------------NTLISGFSKSGDQVMVSKLFQLMRAKGVEP 313
N++IS F KS + F+ + E
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS----EK 437
Query: 314 DVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIH 373
++VS+ + + G N ++AF E+ + ++ T +S+L A+ ++R+G++IH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 374 GCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCD 433
+ +G+ + V +AL+ MY+KCG I A +F+ M RN ++W SMI G A HG+
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 434 EAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACM 492
+E FNQM EE K + +++ A+L+AC HVGLV G R FN M E +KI P+ EHYACM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 493 VDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESA 552
VDLL RAG L +A+E I TM + D+ VW LGAC+ H N EL ++AA+ + EL+P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 553 ANNMLLTDLYANAG 566
A + L+++YA AG
Sbjct: 678 AAYIQLSNIYACAG 691
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 236/500 (47%), Gaps = 48/500 (9%)
Query: 76 LSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARML 135
+ +S ++ IR R + GK++HA+LI + + + LI+ Y++ + A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 136 FDEIP---KTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHL 192
F+ + K ++ W A+ Y G +A+ VF E GL N + +V++AC +
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 193 SDIGTGEKIHSLVLKHS-FGTDAFVVSSLIDMYSKC-GSVEKAKKVFDEMVEKDIVAMNA 250
+G G ++K F +D V SLIDM+ K S E A KVFD+M E ++V
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 251 MVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS----------------KSG 294
M++ +Q G EA+ ++ + + T +++ S + +SG
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 295 --DQVMVS--KLFQLMRAKGVEPD------------VVSWTSVISGLVHNFCN--DEAFD 336
D V S ++ A G D V+SWT++I+G + N CN EA +
Sbjct: 300 LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN-CNLATEAIN 358
Query: 337 TFKEMLSQGFC-PTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMY 395
F EM++QG P T SS AC + ++ R GK++ G A G+ + V ++++ M+
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 396 AKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFT 454
K + +A+ F+ +SE+N V++N+ + G + ++A +L +++ ER+ + +F
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 455 AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYAC--MVDLLGRAGRLAEAYEMIKTM 512
++L+ +VG + G+++ + + K+ C ++ + + G + A + M
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQV---VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 513 STEPDLFVWGALLGACKNHG 532
++ W +++ HG
Sbjct: 536 ENR-NVISWTSMITGFAKHG 554
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 168/378 (44%), Gaps = 48/378 (12%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQ---NIHHARMLFDEIPKTNIHRWIAL 150
L GK LH+ I SGL + + L+ Y +C ++ R +FD + ++ W AL
Sbjct: 285 LSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 151 TGAYARR-GYHQEAVTVFHEMHIQG-LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKH 208
Y + EA+ +F EM QG ++ N F S KACG+LSD G+++ K
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 209 SFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLV 268
+++ V +S+I M+ K +E A++ F+ + EK++V+ N + G + +A L+
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 269 EEIGTPRVKPNVVTWNTLISG-----------------------------------FSKS 293
EI + + T+ +L+SG +SK
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 294 GDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATI 353
G S++F M + +V+SWTS+I+G + +TF +M+ +G P T
Sbjct: 523 GSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 354 SSILPACASAANMRRG-KEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMS 412
+IL AC+ + G + + ++ + + +VD+ + G +++A + M
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 413 -ERNTVTWNSMIFGCANH 429
+ + + W + + C H
Sbjct: 639 FQADVLVWRTFLGACRVH 656
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 23/331 (6%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
GK + Q GLA + +A +I+ + + + A+ F+ + + N+ + R
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
++A + E+ + L + F S+L ++ I GE+IHS V+K + V
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV 511
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRV 276
++LI MYSKCGS++ A +VF+ M +++++ +M++G+ + G A L ++ V
Sbjct: 512 CNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 277 KPNVVTWNTLISGFSKSGDQVMVSKLFQ----LMRAKGVEPDVVSWTSVISGLVHNFCND 332
KPN VT+ ++S S G +VS+ ++ + ++P + + ++ L
Sbjct: 572 KPNEVTYVAILSACSHVG---LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 333 EAFDTFKEMLSQGFCPTSATI---SSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRS 389
+AF+ M P A + + L AC +N GK A +E D + +
Sbjct: 629 DAFEFINTM------PFQADVLVWRTFLGACRVHSNTELGK----LAARKILELDPNEPA 678
Query: 390 A---LVDMYAKCGFISEARTLFDKMSERNTV 417
A L ++YA G E+ + KM ERN V
Sbjct: 679 AYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
+++ G+ +H+Q++ GL+ + LI+ Y++C +I A +F+ + N+ W ++
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEK-IHSLVLKHSFG 211
+A+ G+ + F++M +G+K N ++L AC H+ + G + +S+ H
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEM 240
+ ++D+ + G + A + + M
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTM 637
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 281/544 (51%), Gaps = 60/544 (11%)
Query: 25 YSIRRIYFALLSGTQLVLSCSKSASDAGKPLINGIFIEAHYKMPIISRSFHLSPAAYSER 84
Y+ R +YF S + S +SDA +P + I I K F L A
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDAARP--DSISISCVLKALSGCDDFWLGSLA---- 151
Query: 85 IEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNI 144
+ +H +I G + +IT+YT+C NI AR +FDE+ + ++
Sbjct: 152 -------------RQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 145 HRWIALTGAYARRGYHQEAVTVFHEM-HIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHS 203
W ++ Y++ G ++ ++ M K N + SV +ACG SD+ G ++H
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 204 LVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATE 263
++++ D + +++I Y+KCGS++ A+ +FDEM EKD V A++SGY+ GL E
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 264 ALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVIS 323
A+ LF M + G+ +W ++IS
Sbjct: 319 AM-----------------------------------ALFSEMESIGLS----TWNAMIS 339
Query: 324 GLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEG 383
GL+ N ++E ++F+EM+ G P + T+SS+LP+ ++N++ GKEIH AI G +
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 384 DLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME 443
+++V ++++D YAK GF+ A+ +FD +R+ + W ++I A HG D A LF+QM+
Sbjct: 400 NIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQ 459
Query: 444 -ERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRL 502
K D ++ TAVL+A H G ++ Q +F+ M KY I P EHYACMV +L RAG+L
Sbjct: 460 CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Query: 503 AEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLY 562
++A E I M +P VWGALL G++E+A A L E+EPE+ N ++ +LY
Sbjct: 520 SDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLY 579
Query: 563 ANAG 566
AG
Sbjct: 580 TQAG 583
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 261/505 (51%), Gaps = 32/505 (6%)
Query: 91 DRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIAL 150
D L G+ LHA G A +I L+ Y +C +I A F E N+ W +
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 151 TGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSF 210
AY + + +F +M I+ + N + PS+LK C L D+ GE+IHS ++K +F
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 211 GTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
+A+V S LIDMY+K G ++ A + KD+V+ M++GY Q +AL +
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 271 IGTPRVKPNVVTWNTLISGFS-----KSGDQVMVSKL---------FQ------LMRAKG 310
+ ++ + V +S + K G Q+ FQ R
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 311 VEP-----------DVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPA 359
+E D ++W +++SG + N+EA F M +G + T S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 360 CASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTW 419
+ ANM++GK++H G + + V +AL+ MYAKCG IS+A F ++S +N V+W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 420 NSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQE 478
N++I + HG+ EA++ F+QM + +H++ VL+AC H+GLV+ G F M
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 479 KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAE 538
+Y + P+ EHY C+VD+L RAG L+ A E I+ M +PD VW LL AC H N+E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 539 IAAKHLSELEPESAANNMLLTDLYA 563
AA HL ELEPE +A +LL++LYA
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYA 906
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 238/489 (48%), Gaps = 36/489 (7%)
Query: 77 SPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLF 136
+P A+S + + +L+ G+ LH ++ G + T + L++ Y N+ A +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 137 DEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIG 196
+ + + + L ++ GY ++A+ +F MH+ GL+ + + S++ AC +
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 197 TGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYV 256
G+++H+ K F ++ + +L+++Y+KC +E A F E +++V N M+ Y
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 257 QRGLATEALNLVEEIGTPRVKPNVVTWNTLIS-----GFSKSGDQV-------------- 297
+ + ++ + PN T+ +++ G + G+Q+
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 298 -------MVSKLFQLMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQG 345
M +KL +L A + DVVSWT++I+G +D+A TF++ML +G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 346 FCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEAR 405
+++ + ACA ++ G++IH A V G DL ++ALV +Y++CG I E+
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 406 TLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERKKLDHLSFT--AVLTACCHV 463
F++ + + WN+++ G G +EA+ +F +M R+ +D+ +FT + + A
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASET 705
Query: 464 GLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGA 523
++ G+++ ++ K TE ++ + + G +++A + +ST+ ++ W A
Sbjct: 706 ANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV-SWNA 763
Query: 524 LLGACKNHG 532
++ A HG
Sbjct: 764 IINAYSKHG 772
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 219/474 (46%), Gaps = 42/474 (8%)
Query: 100 LHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGY 159
+HA+++ GL T + LI Y+ + AR +FD + + W+A+ ++
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 160 HQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSS 219
EA+ +F +M++ G+ + SVL AC + + GE++H LVLK F +D +V ++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 220 LIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPN 279
L+ +Y G++ A+ +F M ++D V N +++G Q G +A+ L + + ++P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 280 VVTWNTLISGFSKSG--------------------DQVMVSKLFQLMRAKGVE------- 312
T +L+ S G +++ + L + +E
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 313 ----PDVVSWTS--VISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANM 366
+VV W V GL+ + N +F F++M + P T SIL C ++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRN--SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 367 RRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGC 426
G++IH I + + +V S L+DMYAK G + A + + + ++ V+W +MI G
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 427 ANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNM--MQEKYKIM 483
+ + D+A+ F QM +R + D + T ++AC + ++ GQ++ + +
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 484 PRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
P +V L R G++ E+Y + + D W AL+ + GN E A
Sbjct: 627 PFQN---ALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 220/473 (46%), Gaps = 45/473 (9%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
+L G+ LH+Q++ GL ++ KL FY +++ A +FDE+P+ I W +
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKAC-GHLSDIGTGEKIHSLVLKHSFG 211
A R E +F M + + N VL+AC G E+IH+ +L
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
V + LID+YS+ G V+ A++VFD + KD + AM+SG + EA+ L ++
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 272 GTPRVKPNVVTWNTLISGFSK-----SGDQV------------------MVSKLFQLMRA 308
+ P +++++S K G+Q+ +VS F L
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 309 KGVE--------PDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
E D V++ ++I+GL ++A + FK M G P S T++S++ AC
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 361 ASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWN 420
++ + RG+++H +G + + AL+++YAKC I A F + N V WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 421 SMIFGCANHGYCDE---AIELFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQRLFNMM 476
M+ +G D+ + +F QM+ E + ++ ++L C +G +ELG+++ + +
Sbjct: 460 VMLVA---YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 477 QEKYKIMPRTEHYAC--MVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGA 527
K + Y C ++D+ + G+L A++++ + + D+ W ++
Sbjct: 517 ---IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 200/466 (42%), Gaps = 76/466 (16%)
Query: 173 QGLKQNIFVIPSVLKACGHLS-DIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVE 231
+G++ N + +L+ C + + G K+HS +LK ++ + L D Y G +
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 232 KAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPN------------ 279
A KVFDEM E+ I N M+ R L E L + + V PN
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 280 ------------------------VVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDV 315
V N LI +S++G + ++F +R K D
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK----DH 253
Query: 316 VSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGC 375
SW ++ISGL N C EA F +M G PT SS+L AC ++ G+++HG
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 376 AIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEA 435
+ +G D +V +ALV +Y G + A +F MS+R+ VT+N++I G + GY ++A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 436 IELFNQME-ERKKLDHLSFTAVLTACCHVGLVELGQR-------------------LFNM 475
+ELF +M + + D + +++ AC G + GQ+ L N+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 476 MQE--------KYKIMPRTEH---YACMVDLLGRAGRLAEAYEMIKTMSTE---PDLFVW 521
+ Y + E+ + M+ G L ++ + + M E P+ + +
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 522 GALLGACKNHGNIELAEIAAKHLSELEPE-SAANNMLLTDLYANAG 566
++L C G++EL E + + + +A +L D+YA G
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 23/370 (6%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
+AL+ G+ +HAQ VSG + L+T Y+ C I + + F++ + W AL
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
+ + G ++EA+ VF M+ +G+ N F S +KA +++ G+++H+++ K +
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
++ V ++LI MY+KCGS+ A+K F E+ K+ V+ NA+++ Y + G +EAL+ +++
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSK---LFQLMRAK-GVEPDVVSWTSVISGLVH 327
V+PN VT ++S S G +V K F+ M ++ G+ P + V+ L
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIG---LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 328 NFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHV 387
A + +EM + P + ++L AC NM G E ++ D
Sbjct: 842 AGLLSRAKEFIQEMPIK---PDALVWRTLLSACVVHKNMEIG-EFAAHHLLELEPEDSAT 897
Query: 388 RSALVDMYAKCGFISEARTLFDKMSERNT-----VTW-------NSMIFGCANHGYCDEA 435
L ++YA KM E+ +W +S G NH DE
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 957
Query: 436 IELFNQMEER 445
E F + +R
Sbjct: 958 HEYFQDLTKR 967
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 161/386 (41%), Gaps = 41/386 (10%)
Query: 81 YSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIP 140
Y ++ IR L+ G+ +H+Q+I + + + LI Y + + A +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 141 KTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEK 200
++ W + Y + + +A+T F +M +G++ + + + + AC L + G++
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 201 IHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGL 260
IH+ F +D ++L+ +YS+CG +E++ F++ D +A NA+VSG+ Q G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 261 ATEALNLVEEIGTPRVKPNVVTW-----------------------------------NT 285
EAL + + + N T+ N
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 286 LISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQG 345
LIS ++K G K F + K + VSW ++I+ + EA D+F +M+
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTK----NEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 346 FCPTSATISSILPACASAANMRRG-KEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEA 404
P T+ +L AC+ + +G G+ +VDM + G +S A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 405 RTLFDKMS-ERNTVTWNSMIFGCANH 429
+ +M + + + W +++ C H
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVH 874
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 278/555 (50%), Gaps = 82/555 (14%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
+++ G+ HA +V+G + L+ Y+ C+++ AR +FDE+ ++ W ++
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 153 AYARRGYHQEAVTVFHEMHIQ-GLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
+YA+ G + A+ +F M + G + + + +VL C L G+++H +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV------------------- 252
+ FV + L+DMY+KCG +++A VF M KD+V+ NAMV
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 253 ----------------SGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSK---- 292
SGY QRGL EAL + ++ + +KPN VT +++SG +
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 293 ---------------------SGDQVMVSKLFQLMRAK---------------GVEPDVV 316
GD+ MV M AK E DVV
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 317 SWTSVISGLVHNFCNDEAFDTFKEMLSQGFC---PTSATISSILPACASAANMRRGKEIH 373
+WT +I G + ++A + EM + C P + TIS L ACAS A +R GK+IH
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEED-CQTRPNAFTISCALVACASLAALRIGKQIH 500
Query: 374 GCAIVMGVEG-DLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYC 432
A+ L V + L+DMYAKCG IS+AR +FD M +N VTW S++ G HGY
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 433 DEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYAC 491
+EA+ +F++M KLD ++ VL AC H G+++ G FN M+ + + P EHYAC
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 492 MVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPES 551
+VDLLGRAGRL A +I+ M EP VW A L C+ HG +EL E AA+ ++EL
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 552 AANNMLLTDLYANAG 566
+ LL++LYANAG
Sbjct: 681 DGSYTLLSNLYANAG 695
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 243/528 (46%), Gaps = 85/528 (16%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTN--IHRWIA 149
+ + K++H +L+ G+ L + + LI+ Y + HA L P ++ ++ W +
Sbjct: 39 KTISQVKLIHQKLLSFGILTL-NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 150 LTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS 209
L +Y G + + +F MH + + P V KACG +S + GE H+L L
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 210 FGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEAL---- 265
F ++ FV ++L+ MYS+C S+ A+KVFDEM D+V+ N+++ Y + G AL
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 266 NLVEEIG--------------------------------TPRVKPNVVTWNTLISGFSKS 293
+ E G T + N+ N L+ ++K
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 294 G---------------DQV----MVSKLFQL------------MRAKGVEPDVVSWTSVI 322
G D V MV+ Q+ M+ + ++ DVV+W++ I
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 323 SGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVE 382
SG EA ++MLS G P T+ S+L CAS + GKEIH AI ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 383 ------GDLH-VRSALVDMYAKCGFISEARTLFDKMS--ERNTVTWNSMIFGCANHGYCD 433
GD + V + L+DMYAKC + AR +FD +S ER+ VTW MI G + HG +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 434 EAIELFNQMEE---RKKLDHLSFTAVLTACCHVGLVELGQRLFNM-MQEKYKIMPRTEHY 489
+A+EL ++M E + + + + + L AC + + +G+++ ++ + +P
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS- 516
Query: 490 ACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
C++D+ + G +++A + M + ++ W +L+ HG E A
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMHGYGEEA 563
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATK-LITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
AL+ GK +HA + + + + LI Y +C +I AR++FD + N W +L
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y GY +EA+ +F EM G K + + VL AC H I G + + +K FG
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR-MKTVFG 610
Query: 212 TDAFV--VSSLIDMYSKCGSVEKAKKVFDEM-VEKDIVAMNAMVSGYVQRGLATEALNLV 268
+ L+D+ + G + A ++ +EM +E V A +S G
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAA 670
Query: 269 EEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDV-VSWTSVISGLVH 327
E+I T + ++ L + ++ +G V+++ LMR KGV+ SW I G
Sbjct: 671 EKI-TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 328 NFCNDEAFDTFKEM 341
F D+ KE+
Sbjct: 730 FFVGDKTHPHAKEI 743
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 264/511 (51%), Gaps = 36/511 (7%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
++++ G ++H +++ S R + L+ Y + AR +FD + ++ W +
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y R GY +A+ +F M + + + I S+L CGHL D+ G +H LV + G
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
V ++L++MY KCG +++A+ VFD M +D++ M++GY + G AL L +
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 272 GTPRVKPNVVTWNTLIS---------------GFS---KSGDQVMVSKLFQLMRAKGVEP 313
V+PN VT +L+S G++ + +++ M AK
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 314 DVV-------------SWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
D+ W+++I+G V N +A FK M + P AT++S+LPA
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 361 ASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSER----NT 416
A+ A++R+ IH G L + LV +Y+KCG + A +F+ + E+ +
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 417 VTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNM 475
V W ++I G HG A+++F +M + ++FT+ L AC H GLVE G LF
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 476 MQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIE 535
M E YK + R+ HY C+VDLLGRAGRL EAY +I T+ EP VWGALL AC H N++
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQ 610
Query: 536 LAEIAAKHLSELEPESAANNMLLTDLYANAG 566
L E+AA L ELEPE+ N +LL ++YA G
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALG 641
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 234/503 (46%), Gaps = 57/503 (11%)
Query: 77 SPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLT-QIATKLITFYTECQNIHHARML 135
S Y + + +++ K LH +I G R++ I + L Y C +I +AR L
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVITGG--RVSGHILSTLSVTYALCGHITYARKL 71
Query: 136 FDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLK--QNIFVIPSVLKACGHLS 193
F+E+P++++ + + Y R G + +A++VF M +G+K + + P V KA G L
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 194 DIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVS 253
+ G +H +L+ FG D +V ++L+ MY G VE A+ VFD M +D+++ N M+S
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 254 GYVQRGLATEAL--------------------------------------NLVEEIGTPR 275
GY + G +AL LVEE R
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE---KR 248
Query: 276 VKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAF 335
+ + N L++ + K G +F M + DV++WT +I+G + + A
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENAL 304
Query: 336 DTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMY 395
+ + M +G P + TI+S++ C A + GK +HG A+ V D+ + ++L+ MY
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 396 AKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFT 454
AKC + +F S+ +T W+++I GC + +A+ LF +M E + + +
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 455 AVLTACCHVGLVELGQRL-FNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEM---IK 510
++L A + L +L Q + + K M + +V + + G L A+++ I+
Sbjct: 425 SLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 511 TMSTEPDLFVWGALLGACKNHGN 533
D+ +WGAL+ HG+
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGD 505
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 9/257 (3%)
Query: 284 NTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLS 343
+TL ++ G KLF+ M + ++S+ VI V +A F M+S
Sbjct: 53 STLSVTYALCGHITYARKLFEEMP----QSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 344 QGF--CPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFI 401
+G P T + A +M+ G +HG + D +V++AL+ MY G +
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 402 SEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTAC 460
AR +FD M R+ ++WN+MI G +GY ++A+ +F+ M E LDH + ++L C
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 461 CHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFV 520
H+ +E+G+ + +++EK ++ + E +V++ + GR+ EA + M D+
Sbjct: 229 GHLKDLEMGRNVHKLVEEK-RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR-DVIT 286
Query: 521 WGALLGACKNHGNIELA 537
W ++ G++E A
Sbjct: 287 WTCMINGYTEDGDVENA 303
>sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protein At1g28690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2
SV=2
Length = 520
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 276/516 (53%), Gaps = 49/516 (9%)
Query: 59 IFIEAHYK-MPIISRSFHLSPAAY-SERIEIYIRDRALQSGKILHAQLIVSGLARLTQIA 116
I HY P+ LSPA Y + ++ +I A ++GK +HA +I +G I+
Sbjct: 13 ILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNIS 72
Query: 117 TKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLK 176
KL+ + +C + +AR +FDE+PK + + + Y + G +E + + M G K
Sbjct: 73 IKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEK 132
Query: 177 QNIFVIPSVLKACGHLSDIGTGEK-----IHSLVLKHSFGTDAFVVSSLIDMYSKCGSVE 231
+ + + VLKA + +H+ ++K D ++++L+D Y K G +E
Sbjct: 133 ADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLE 192
Query: 232 KAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI-GTPRVKPNVVTWNTLISGF 290
A+ VF+ M ++++V +M+SGY+ +G +A EEI T +VK ++V +N ++ GF
Sbjct: 193 SARTVFETMKDENVVCCTSMISGYMNQGFVEDA----EEIFNTTKVK-DIVVYNAMVEGF 247
Query: 291 SKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTS 350
S+SG+ + D + M GF P
Sbjct: 248 SRSGETA----------------------------------KRSVDMYISMQRAGFHPNI 273
Query: 351 ATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDK 410
+T +S++ AC+ + G+++H + GV + + S+L+DMYAKCG I++AR +FD+
Sbjct: 274 STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 411 MSERNTVTWNSMIFGCANHGYCDEAIELFNQMEE-RKKLDHLSFTAVLTACCHVGLVELG 469
M E+N +W SMI G +G +EA+ELF +M+E R + ++++F L+AC H GLV+ G
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 470 QRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACK 529
+F MQ Y + P+ EHYAC+VDL+GRAG L +A+E + M PD +W ALL +C
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 530 NHGNIELAEIAAKHLSELEPESAANNML-LTDLYAN 564
HGN+ELA IAA L +L + L L+++YA+
Sbjct: 454 LHGNVELASIAASELFKLNADKRPGAYLALSNVYAS 489
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 248/444 (55%), Gaps = 21/444 (4%)
Query: 131 HARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPS------ 184
+AR L P+ + + L Y+ +V VF EM +G FV P
Sbjct: 57 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKG-----FVFPDSFSFAF 111
Query: 185 VLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKD 244
V+KA + + TG ++H LKH + FV ++LI MY CG VE A+KVFDEM + +
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN 171
Query: 245 IVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQ 304
+VA NA+++ + A EI + N +WN +++G+ K+G+ ++F
Sbjct: 172 LVAWNAVITACFRGNDVAGA----REIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 305 LMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA 364
M + D VSW+++I G+ HN +E+F F+E+ G P +++ +L AC+ +
Sbjct: 228 EMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSE-RNTVTWNSMI 423
+ GK +HG G + V +AL+DMY++CG + AR +F+ M E R V+W SMI
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 424 FGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKI 482
G A HG +EA+ LFN+M D +SF ++L AC H GL+E G+ F+ M+ Y I
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 483 MPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAK 542
P EHY CMVDL GR+G+L +AY+ I M P VW LLGAC +HGNIELAE +
Sbjct: 404 EPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Query: 543 HLSELEPESAANNMLLTDLYANAG 566
L+EL+P ++ + +LL++ YA AG
Sbjct: 464 RLNELDPNNSGDLVLLSNAYATAG 487
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 119 LITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQN 178
++ Y + + A+ +F E+P + W + A G E+ F E+ G+ N
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 179 IFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFD 238
+ VL AC G+ +H V K + V ++LIDMYS+CG+V A+ VF+
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 239 EMVEKD-IVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQV 297
M EK IV+ +M++G G EA+ L E+ V P+ +++ +L+ S +G
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 298 MVSKLF-QLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSI 356
F ++ R +EP++ + ++ + +A+D +M PT+ ++
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTL 445
Query: 357 LPACASAANMRRGKEI 372
L AC+S N+ +++
Sbjct: 446 LGACSSHGNIELAEQV 461
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 157/389 (40%), Gaps = 86/389 (22%)
Query: 184 SVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEK 243
S+L +C +L + +IH L +K+ TD++ LI
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLI---------------------- 44
Query: 244 DIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGD-QVMVSKL 302
++ +S ++AL + +P+ +NTL+ G+S+S + V+
Sbjct: 45 ----LHCAIS-------ISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVF 93
Query: 303 FQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACAS 362
++MR V PD S+ VI V NF
Sbjct: 94 VEMMRKGFVFPDSFSFAFVIKA-VENF--------------------------------- 119
Query: 363 AANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSM 422
++R G ++H A+ G+E L V + L+ MY CG + AR +FD+M + N V WN++
Sbjct: 120 -RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 423 IFGCANHGYCDEAIELFNQMEERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKI 482
I C A E+F++M R +H S+ +L G +E +R+F+ M + +
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVR---NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 483 MPRTEHYACMVDLLGRAGRLAEAYEMIKTMS---TEPDLFVWGALLGACKNHGNIELAEI 539
++ M+ + G E++ + + P+ +L AC G+ E +I
Sbjct: 236 -----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 540 AAKHLSELEPE--SAANNMLLTDLYANAG 566
+ + + NN L+ D+Y+ G
Sbjct: 291 LHGFVEKAGYSWIVSVNNALI-DMYSRCG 318
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 253/479 (52%), Gaps = 45/479 (9%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTE--CQNIHHARMLFDEIPKTNIHRWIALT 151
L K +H ++ GL + I TKLI T+ +AR + + + N W A+
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
YA G EA+ ++ M + + F ++LKACG + D+ G + H+ +
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF 181
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+V +++IDMY KC S++ A+KVFDEM E+D
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERD--------------------------- 214
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCN 331
V++W LI+ +++ G+ ++LF+ + K D+V+WT++++G N
Sbjct: 215 --------VISWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKP 262
Query: 332 DEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHV--RS 389
EA + F M G T++ + ACA + A G HV S
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGS 322
Query: 390 ALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM--EERKK 447
AL+DMY+KCG + EA +F M+ +N T++SMI G A HG EA+ LF+ M + K
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 448 LDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYE 507
+ ++F L AC H GLV+ G+++F+ M + + + P +HY CMVDLLGR GRL EA E
Sbjct: 383 PNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALE 442
Query: 508 MIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
+IKTMS EP VWGALLGAC+ H N E+AEIAA+HL ELEP+ N +LL+++YA+AG
Sbjct: 443 LIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAG 501
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 337 TFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYA 396
TF E+ +Q +SS++ N+ + K+IHG + G++ ++ + L+
Sbjct: 37 TFSEISNQ----KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLT 92
Query: 397 KCGFISE--ARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERKKLDHLSFT 454
K G + AR + + + RN W ++I G A G DEAI ++ M ++++ +SFT
Sbjct: 93 KLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM-RKEEITPVSFT 151
Query: 455 --AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTM 512
A+L AC + + LG R F+ + + M+D+ + + A ++ M
Sbjct: 152 FSALLKACGTMKDLNLG-RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 513 STEPDLFVWGALLGACKNHGNIELA 537
E D+ W L+ A GN+E A
Sbjct: 211 P-ERDVISWTELIAAYARVGNMECA 234
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 288 bits (738), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 277/525 (52%), Gaps = 52/525 (9%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L+ G LHA + S A + T + Y +C N+ A++LFD N + A+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y++ + +A+ +FH + GL + + V +AC + + G +I+ L +K S D
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
V ++ IDMY KC ++ +A +VFDEM +D V+ NA+++ + Q G E L L +
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 274 PRVKPNVVTWNT----------------------------------LISGFSKSG----D 295
R++P+ T+ + LI +SK G
Sbjct: 477 SRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 296 QVMVSKLFQL------------MRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLS 343
+ + S+ FQ M K ++ VSW S+ISG V +++A F M+
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 344 QGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISE 403
G P T +++L CA+ A+ GK+IH I ++ D+++ S LVDMY+KCG + +
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Query: 404 ARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCH 462
+R +F+K R+ VTWN+MI G A+HG +EAI+LF +M E K +H++F ++L AC H
Sbjct: 657 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 463 VGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWG 522
+GL++ G F MM+ Y + P+ HY+ MVD+LG++G++ A E+I+ M E D +W
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWR 776
Query: 523 ALLGACKNH-GNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
LLG C H N+E+AE A L L+P+ ++ LL+++YA+AG
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 215/510 (42%), Gaps = 73/510 (14%)
Query: 88 YIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRW 147
++ D +L G +H ++ G A+ L+ Y + + + +F IP+ N W
Sbjct: 192 FLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 148 IALTGAYARRGYHQEAVTVFHEMHI--QGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLV 205
A+ + A+ F EM G+ Q+I+ SVL++C LS++ G ++H+
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY--ASVLRSCAALSELRLGGQLHAHA 307
Query: 206 LKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEAL 265
LK F D V ++ +DMY+KC +++ A+ +FD + + NAM++GY Q +AL
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 266 NL----------VEEIGTPRV-------------------------KPNVVTWNTLISGF 290
L +EI V +V N I +
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 291 SKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTS 350
K ++F MR + D VSW ++I+ N E F ML P
Sbjct: 428 GKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 351 ATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDK 410
T SIL AC + ++ G EIH + G+ + V +L+DMY+KCG I EA + +
Sbjct: 484 FTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 411 MSERNT--------------------VTWNSMIFGCANHGYCDEAIELFNQMEERK-KLD 449
+R V+WNS+I G ++A LF +M E D
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 450 HLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYAC--MVDLLGRAGRLAEAYE 507
++ VL C ++ LG+++ + +K +++ Y C +VD+ + G L ++
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGDLHDSRL 659
Query: 508 MIKTMSTEPDLFVWGALLGACKNHGNIELA 537
M + S D W A++ +HG E A
Sbjct: 660 MFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 191/431 (44%), Gaps = 63/431 (14%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL+ GK HA +I+SG T + L+ YT ++ A M+FD++P ++ W +
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 153 AYARR--------------------------GYHQ-----EAVTVFHEMHIQGLKQNIFV 181
Y++ GY Q +++ VF +M +G++ +
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 182 IPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMV 241
+LK C L D G +IH +V++ TD S+L+DMY+K ++ +VF +
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 242
Query: 242 EKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS-----KSGDQ 296
EK+ V+ +A+++G VQ L + AL +E+ + + +++ + + G Q
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 297 VMVSKLFQLMRAKGVEPDVV--------------------------SWTSVISGLVHNFC 330
+ L A G+ S+ ++I+G
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSA 390
+A F ++S G ++S + ACA + G +I+G AI + D+ V +A
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 391 LVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLD 449
+DMY KC ++EA +FD+M R+ V+WN++I +G E + LF M R + D
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 450 HLSFTAVLTAC 460
+F ++L AC
Sbjct: 483 EFTFGSILKAC 493
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 187/415 (45%), Gaps = 48/415 (11%)
Query: 155 ARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDA 214
A++G + M I G + FV+ +L+ + D + S+V D
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA----SMVFDKMPLRDV 114
Query: 215 FVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTP 274
+ +I+ YSK + KA F+ M +D+V+ N+M+SGY+Q G + +++ + ++G
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 275 RVKPNVVTWNTLIS----------GFSKSG---------DQVMVSKLFQLMRAKGV---- 311
++ + T+ ++ G G D V S L M AKG
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD-MYAKGKRFVE 233
Query: 312 ---------EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACAS 362
E + VSW+++I+G V N A FKEM + + +S+L +CA+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 363 AANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSM 422
+ +R G ++H A+ D VR+A +DMYAKC + +A+ LFD N ++N+M
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 423 IFGCANHGYCDEAIELFNQ-MEERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYK 481
I G + + +A+ LF++ M D +S + V AC V + G +++ +
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL-----A 408
Query: 482 IMPRTEHYACM----VDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHG 532
I C+ +D+ G+ LAEA+ + M D W A++ A + +G
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNG 462
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 157/343 (45%), Gaps = 30/343 (8%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIH-----HARML--------FDEI 139
+L G +H+ ++ SG+A + + LI Y++C I H+R +E+
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 140 PKTNIHR-------WIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHL 192
K + R W ++ Y + ++A +F M G+ + F +VL C +L
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 193 SDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV 252
+ G G++IH+ V+K +D ++ S+L+DMYSKCG + ++ +F++ + +D V NAM+
Sbjct: 617 ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 676
Query: 253 SGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSK----LFQLMRA 308
GY G EA+ L E + +KPN VT+ +++ + G ++ K + + R
Sbjct: 677 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG---LIDKGLEYFYMMKRD 733
Query: 309 KGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRR 368
G++P + +++++ L + A + +EM F ++L C N
Sbjct: 734 YGLDPQLPHYSNMVDILGKSGKVKRALELIREM---PFEADDVIWRTLLGVCTIHRNNVE 790
Query: 369 GKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKM 411
E A++ D + L ++YA G + L M
Sbjct: 791 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 40/289 (13%)
Query: 185 VLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKD 244
V K C + G++ H+ ++ F FV++ L+ +Y+ A VFD+M +D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 245 IVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQ 304
VV+WN +I+G+SKS D + F
Sbjct: 114 -----------------------------------VVSWNKMINGYSKSNDMFKANSFFN 138
Query: 305 LMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA 364
+M + DVVSW S++SG + N + ++ + F +M +G T + IL C+
Sbjct: 139 MMPVR----DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLE 194
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
+ G +IHG + +G + D+ SAL+DMYAK E+ +F + E+N+V+W+++I
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 254
Query: 425 GCANHGYCDEAIELFNQMEE-RKKLDHLSFTAVLTACCHVGLVELGQRL 472
GC + A++ F +M++ + + +VL +C + + LG +L
Sbjct: 255 GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 41/254 (16%)
Query: 334 AFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVD 393
+F F + L+Q ++ S + CA + GK+ H I+ G V + L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 394 MYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK------- 446
+Y A +FDKM R+ V+WN MI G + +A FN M R
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 447 -------------------------KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYK 481
+ D +F +L C + LG ++ ++ +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV---VR 208
Query: 482 IMPRTEHYA--CMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEI 539
+ T+ A ++D+ + R E+ + + + E + W A++ C + L +
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGI-PEKNSVSWSAIIAGCVQNN---LLSL 264
Query: 540 AAKHLSELEPESAA 553
A K E++ +A
Sbjct: 265 ALKFFKEMQKVNAG 278
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 281/559 (50%), Gaps = 70/559 (12%)
Query: 78 PAAYSER---IEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITF--YTECQNIHHA 132
P +ER I + R +L+ K H +I +G A+KL + ++ +A
Sbjct: 24 PTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYA 83
Query: 133 RMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQG-LKQNIFVIPSVLKACGH 191
R +FDEIPK N W L AYA ++ F +M + N + P ++KA
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAE 143
Query: 192 LSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAM 251
+S + G+ +H + +K + G+D FV +SLI Y CG ++ A KVF + EKD+V+ N+M
Sbjct: 144 VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 252 VSGYVQRGLATEALNLVEEIGTPRVKPNVVTW---------------------------- 283
++G+VQ+G +AL L +++ + VK + VT
Sbjct: 204 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRV 263
Query: 284 -------NTLISGFSKSGDQVMVSKLFQLMRAKG-------------------------- 310
N ++ ++K G +LF M K
Sbjct: 264 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNS 323
Query: 311 -VEPDVVSWTSVISGLVHNFCNDEAFDTFKEM-LSQGFCPTSATISSILPACASAANMRR 368
+ D+V+W ++IS N +EA F E+ L + T+ S L ACA +
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 369 GKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCAN 428
G+ IH G+ + HV SAL+ MY+KCG + ++R +F+ + +R+ W++MI G A
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 429 HGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTE 487
HG +EA+++F +M+E K + ++FT V AC H GLV+ + LF+ M+ Y I+P +
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 488 HYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSEL 547
HYAC+VD+LGR+G L +A + I+ M P VWGALLGACK H N+ LAE+A L EL
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563
Query: 548 EPESAANNMLLTDLYANAG 566
EP + ++LL+++YA G
Sbjct: 564 EPRNDGAHVLLSNIYAKLG 582
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL+ G+ +H+ + G+ + + LI Y++C ++ +R +F+ + K ++ W A+ G
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKI-HSLVLKHSFG 211
A G EAV +F++M +K N +V AC H + E + H + +
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEA-LNLVEE 270
+ + ++D+ + G +EKA K + M + + V G + A LNL E
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMP----IPPSTSVWGALLGACKIHANLNLAEM 555
Query: 271 IGTP--RVKPNVVTWNTLISG-FSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVH 327
T ++P + L+S ++K G VS+L + MR G++ + + I G++H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 328 NF 329
F
Sbjct: 616 EF 617
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 280/505 (55%), Gaps = 34/505 (6%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R LQ +H ++ +GL + ++ LI Y +C N+ AR+LFD+ ++ W ++
Sbjct: 212 RGLQ----VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
YA G EA+ +F+ M + ++ + SV+K C +L ++ E++H V+K+ F
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEM-VEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
D + ++L+ YSKC ++ A ++F E+ ++V+ AM+SG++Q EA++L E
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 271 IGTPRVKPNVVTWNTLISGF-----SKSGDQVMVS-----------------KLFQLMRA 308
+ V+PN T++ +++ S+ QV+ + KL ++ A
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 309 KGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASA 363
V + D+V+W+++++G + A F E+ G P T SSIL CA+
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 364 -ANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSM 422
A+M +GK+ HG AI ++ L V SAL+ MYAK G I A +F + E++ V+WNSM
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 423 IFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYK 481
I G A HG +A+++F +M++RK K+D ++F V AC H GLVE G++ F++M K
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 482 IMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAA 541
I P EH +CMVDL RAG+L +A ++I+ M +W +L AC+ H EL +AA
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 542 KHLSELEPESAANNMLLTDLYANAG 566
+ + ++PE +A +LL+++YA +G
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESG 712
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 40/470 (8%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
G+ LH Q I G + T L+ Y + N R +FDE+ + N+ W L YAR
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
+ E +T+F M +G + N F + L G G ++H++V+K+ V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEAL----------- 265
+SLI++Y KCG+V KA+ +FD+ K +V N+M+SGY GL EAL
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 266 ---------------NLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSK------LFQ 304
NL E T ++ +VV + L ++ V SK +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 305 LMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA 364
L + G +VVSWT++ISG + N +EA D F EM +G P T S IL A +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 365 NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIF 424
E+H + E V +AL+D Y K G + EA +F + +++ V W++M+
Sbjct: 412 P----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 425 GCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQ-RLFNMMQEKYKI 482
G A G + AI++F ++ + K + +F+++L C +GQ + F+ K ++
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQFHGFAIKSRL 526
Query: 483 MPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHG 532
+ ++ + + G + A E+ K E DL W +++ HG
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHG 575
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 206/446 (46%), Gaps = 47/446 (10%)
Query: 129 IHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKA 188
+++A LFD+ P + +I+L ++R G QEA +F +H G++ + + SVLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 189 CGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAM 248
L D G ++H +K F D V +SL+D Y K + + +KVFDEM E+++V
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 249 NAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTW------------------------- 283
++SGY + + E L L + +PN T+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 284 ----------NTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDE 333
N+LI+ + K G+ LF K VV+W S+ISG N + E
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS----VVTWNSMISGYAANGLDLE 278
Query: 334 AFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVD 393
A F M + ++ +S++ CA+ +R +++H + G D ++R+AL+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 394 MYAKCGFISEARTLFDKMS-ERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHL 451
Y+KC + +A LF ++ N V+W +MI G + +EA++LF++M+ + + +
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 452 SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKT 511
+++ +LTA + E+ ++ E+ + ++D + G++ EA ++
Sbjct: 399 TYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSG 453
Query: 512 MSTEPDLFVWGALLGACKNHGNIELA 537
+ + D+ W A+L G E A
Sbjct: 454 ID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 60/419 (14%)
Query: 57 NGIFIEA---HYKMPIISRSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLT 113
NG+ +EA Y M + LS ++++ I++ + L+ + LH ++ G
Sbjct: 273 NGLDLEALGMFYSMRL--NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 114 QIATKLITFYTECQNIHHARMLFDEIPKT-NIHRWIALTGAYARRGYHQEAVTVFHEMHI 172
I T L+ Y++C + A LF EI N+ W A+ + + +EAV +F EM
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 173 QGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEK 232
+G++ N F +L A +S ++H+ V+K ++ + V ++L+D Y K G VE+
Sbjct: 391 KGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 233 AKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNT------- 285
A KVF + +KDIVA +AM++GY Q G A+ + E+ +KPN T+++
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 286 -----------------------------LISGFSKSGDQVMVSKLFQLMRAKGVEPDVV 316
L++ ++K G+ ++F+ R E D+V
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR----EKDLV 562
Query: 317 SWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKE----- 371
SW S+ISG + +A D FKEM + T + AC A + G++
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 372 IHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKM-SERNTVTWNSMIFGCANH 429
+ C I E + S +VD+Y++ G + +A + + M + + W +++ C H
Sbjct: 623 VRDCKIAPTKEHN----SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 2/231 (0%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
++ GK H I S L +++ L+T Y + NI A +F + ++ W ++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKH-SFG 211
YA+ G +A+ VF EM + +K + V AC H + GEK ++++
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
S ++D+YS+ G +EKA KV + M + + + TE L E
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDV-VSWTSV 321
+ + L + +++SGD +K+ +LM + V+ + SW V
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 264/490 (53%), Gaps = 45/490 (9%)
Query: 115 IATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQG 174
+ + I+ Y E +I +R +FD + NI W + G Y + E++ +F E G
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI--G 310
Query: 175 LKQNIFVIPSVL---KACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVE 231
K+ + + L A L + G + H V K+ +V+SL+ MYS+CGSV
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 232 KAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISG-- 289
K+ VF M E+D+V+ N M+S +VQ GL E L LV E+ K + +T L+S
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 290 --------------------------------FSKSGDQVMVSKLFQLMRAKGVEPDVVS 317
+SKSG + KLF+ + E D +
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFE--GSGYAERDQAT 488
Query: 318 WTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAI 377
W S+ISG N ++ F F++ML Q P + T++SILPAC+ ++ GK++HG +I
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 378 VMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIE 437
++ ++ V SALVDMY+K G I A +F + ERN+VT+ +MI G HG + AI
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 438 LFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLL 496
LF M+E K D ++F AVL+AC + GL++ G ++F M+E Y I P +EHY C+ D+L
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 497 GRAGRLAEAYEMIKTMSTEPDLF-VWGALLGACKNHGNIELAEIAAKHLSELEPES--AA 553
GR GR+ EAYE +K + E ++ +WG+LLG+CK HG +ELAE ++ L++ + +
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 554 NNMLLTDLYA 563
+LL+++YA
Sbjct: 729 YEVLLSNMYA 738
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 231/500 (46%), Gaps = 46/500 (9%)
Query: 81 YSERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHH------ARM 134
YS ++ + L++GK +H LI + L+ Y C N R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 135 LFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSD 194
+FD + + N+ W L Y + G + EA F M +K + +V A
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 195 IGTGEKIHSLVLK--HSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV 252
I + L+LK + D FVVSS I MY++ G +E +++VFD VE++I N M+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 253 SGYVQRGLATEALNL-VEEIGTPRVKPNVVTWNTLISGFS-----KSGDQ---------- 296
YVQ E++ L +E IG+ + + VT+ S S + G Q
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 297 -----------VMVSKLFQLMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKE 340
VM S+ + ++ GV E DVVSW ++IS V N +DE E
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 341 MLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGF 400
M QGF T++++L A ++ N GK+ H I G++ + + S L+DMY+K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGL 468
Query: 401 ISEARTLFD--KMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVL 457
I ++ LF+ +ER+ TWNSMI G +G+ ++ +F +M E+ + + ++ ++L
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 458 TACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPD 517
AC +G V+LG++L +Y + + +VD+ +AG + A +M + + E +
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMF-SQTKERN 586
Query: 518 LFVWGALLGACKNHGNIELA 537
+ ++ HG E A
Sbjct: 587 SVTYTTMILGYGQHGMGERA 606
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 204/458 (44%), Gaps = 52/458 (11%)
Query: 126 CQ--NIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQN--IFV 181
CQ N AR LFD IPK W + + EA+ + M N +
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 182 IPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSV------EKAKK 235
S LKAC ++ G+ +H +++ + V +SL++MY C + + +K
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 236 VFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS---- 291
VFD M K++VA N ++S YV+ G EA + VKP+ V++ + S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 292 ------------KSGDQVMVSKLFQLMRAKG------------------VEPDVVSWTSV 321
K GD+ V LF + A VE ++ W ++
Sbjct: 230 IKKANVFYGLMLKLGDE-YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 322 ISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAA--NMRRGKEIHGCAIVM 379
I V N C E+ + F E + S ++ +L A A +A + G++ HG
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEI-VSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 380 GVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELF 439
E + + ++L+ MY++CG + ++ +F M ER+ V+WN+MI +G DE + L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 440 NQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGR 498
+M+++ K+D+++ TA+L+A ++ E+G++ + + Y ++D+ +
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSK 465
Query: 499 AGRLAEAYEMIK-TMSTEPDLFVWGALLGACKNHGNIE 535
+G + + ++ + + E D W +++ +G+ E
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 4/257 (1%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDE--IPKTNIHRWIA 149
R + GK HA LI G+ + + + LI Y++ I ++ LF+ + + W +
Sbjct: 433 RNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 150 LTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS 209
+ Y + G+ ++ VF +M Q ++ N + S+L AC + + G+++H ++
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 210 FGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVE 269
+ FV S+L+DMYSK G+++ A+ +F + E++ V M+ GY Q G+ A++L
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 270 EIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMR-AKGVEPDVVSWTSVISGLVHN 328
+ +KP+ +T+ ++S S SG K+F+ MR ++P + + L
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 329 FCNDEAFDTFKEMLSQG 345
+EA++ K + +G
Sbjct: 672 GRVNEAYEFVKGLGEEG 688
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 45/308 (14%)
Query: 298 MVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSIL 357
+V K+F MR K +VV+W ++IS V N EA F M+ P+ + ++
Sbjct: 166 VVRKVFDNMRRK----NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVF 221
Query: 358 PACASAANMRRGKEIHGCAIVMGVE--GDLHVRSALVDMYAKCGFISEARTLFDKMSERN 415
PA + + ++++ +G + +G E DL V S+ + MYA+ G I +R +FD ERN
Sbjct: 222 PAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN 281
Query: 416 TVTWNSMIFGCANHGYCDEAIELFNQMEERKKL--DHLSFTAVLTACCHVGLVELGQRLF 473
WN+MI + E+IELF + K++ D +++ +A + VELG++
Sbjct: 282 IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 474 NMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWG----------- 522
+ + ++ +P + MV + R G + +++ + +M E D+ W
Sbjct: 342 GFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGL 399
Query: 523 ------------------------ALLGACKNHGNIELAEIAAKHLSELEPESAANNMLL 558
ALL A N N E+ + L + N L
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYL 459
Query: 559 TDLYANAG 566
D+Y+ +G
Sbjct: 460 IDMYSKSG 467
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 263/487 (54%), Gaps = 41/487 (8%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHH-----ARMLFDEIPKTNIHR 146
R ++ +HA I SG R T A +++ F ++HH A +F+++P+ N
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRF-CATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 147 WIALTGAYARRGYHQE--AVTVFHEM-HIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHS 203
W + ++ + A+T+F+EM + ++ N F PSVLKAC I G++IH
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 204 LVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVF-DEMVEKDIVAMNAMVSGYVQRGLAT 262
L LK+ FG D FV+S+L+ MY CG ++ A+ +F ++EKD+V M
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM-------------- 198
Query: 263 EALNLVEEIGTPRVKPN--VVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTS 320
T R K + +V WN +I G+ + GD LF MR + V VSW +
Sbjct: 199 ----------TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNT 244
Query: 321 VISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMG 380
+ISG N +A + F+EM P T+ S+LPA + ++ G+ +H A G
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 381 VEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFN 440
+ D + SAL+DMY+KCG I +A +F+++ N +TW++MI G A HG +AI+ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 441 QMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRA 499
+M + + +++ +LTAC H GLVE G+R F+ M + PR EHY CMVDLLGR+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 500 GRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLT 559
G L EA E I M +PD +W ALLGAC+ GN+E+ + A L ++ P + + L+
Sbjct: 425 GLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALS 484
Query: 560 DLYANAG 566
++YA+ G
Sbjct: 485 NMYASQG 491
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 19/334 (5%)
Query: 83 ERIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKT 142
E+ + + DR + G+I+ +++ G RL +C+ ARMLFD++ +
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG-----------DCKA---ARMLFDKMRQR 237
Query: 143 NIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIH 202
++ W + Y+ G+ ++AV VF EM ++ N + SVL A L + GE +H
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 203 SLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLAT 262
D + S+LIDMYSKCG +EKA VF+ + ++++ +AM++G+ G A
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Query: 263 EALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLF-QLMRAKGVEPDVVSWTSV 321
+A++ ++ V+P+ V + L++ S G + F Q++ G+EP + + +
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCM 417
Query: 322 ISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGV 381
+ L + DEA + F +L+ P ++L AC N+ GK + + M V
Sbjct: 418 VDLLGRSGLLDEA-EEF--ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM-V 473
Query: 382 EGDLHVRSALVDMYAKCGFISEARTLFDKMSERN 415
D AL +MYA G SE + +M E++
Sbjct: 474 PHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 264/476 (55%), Gaps = 2/476 (0%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
++ GK HA IV+G+ + T L+ FY + I +A M+FD + + ++ W +
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
Y ++G ++A+ + M ++ LK + + +++ A ++ G+++ ++HSF +
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
D + S+++DMY+KCGS+ AKKVFD VEKD++ N +++ Y + GL+ EAL L +
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 273 TPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCND 332
V PNV+TWN +I ++G +F M++ G+ P+++SWT++++G+V N C++
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 333 EAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDL-HVRSAL 391
EA ++M G P + +I+ L ACA A++ G+ IHG I L + ++L
Sbjct: 529 EAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSL 588
Query: 392 VDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDH 450
VDMYAKCG I++A +F N+MI A +G EAI L+ +E K D+
Sbjct: 589 VDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 451 LSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIK 510
++ T VL+AC H G + +F + K + P EHY MVDLL AG +A +I+
Sbjct: 649 ITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Query: 511 TMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
M +PD + +L+ +C EL + ++ L E EPE++ N + +++ YA G
Sbjct: 709 EMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 257/534 (48%), Gaps = 40/534 (7%)
Query: 72 RSFHLSPAAYSERIEIYIRDRALQSGKILHAQLIVSG--LARLTQIATKLITFYTECQNI 129
R+ + P Y E ++ + +R L +GK +HA+++ +G AR I TKL+ FY +C +
Sbjct: 64 RNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDAL 123
Query: 130 HHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKAC 189
A +LF ++ N+ W A+ G R G + A+ F EM + + FV+P+V KAC
Sbjct: 124 EIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC 183
Query: 190 GHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMN 249
G L G +H V+K FV SSL DMY KCG ++ A KVFDE+ +++ VA N
Sbjct: 184 GALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 250 AMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSG--------------- 294
A++ GYVQ G EA+ L ++ V+P VT +T +S + G
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 295 ----DQVMVSKLFQLMRAKGV------------EPDVVSWTSVISGLVHNFCNDEAFDTF 338
D ++ + L G+ E DVV+W +ISG V ++A
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 339 KEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKC 398
+ M + T+++++ A A N++ GKE+ I E D+ + S ++DMYAKC
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 399 GFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTAVL 457
G I +A+ +FD E++ + WN+++ A G EA+ LF M+ E + +++ ++
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 458 TACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMST--- 514
+ G V+ + +F MQ I+P + M++ + + G EA ++ M
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Query: 515 EPDLFVWGALLGACKNHGNIELAE-IAAKHLSELEPESAAN-NMLLTDLYANAG 566
P+ F L AC + ++ + I + L+ S + L D+YA G
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 48/441 (10%)
Query: 130 HHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKAC 189
HH + HR + + G +EA+++ EM + L+ + +L+ C
Sbjct: 25 HHDEQAHSPSSTSYFHR----VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGC 80
Query: 190 GHLSDIGTGEKIHSLVLKHS--FGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVA 247
+ D+ TG++IH+ +LK+ + + ++ + L+ Y+KC ++E A+ +F ++ +++ +
Sbjct: 81 VYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFS 140
Query: 248 MNAMVSGYVQRGLATEAL----NLVEEIGTPR--VKPNV------VTWNTLISGFS---- 291
A++ + GL AL ++E P V PNV + W+ G
Sbjct: 141 WAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVV 200
Query: 292 KSG--DQVMVSKLFQLMRAK-GVEPD------------VVSWTSVISGLVHNFCNDEAFD 336
KSG D V V+ M K GV D V+W +++ G V N N+EA
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 337 TFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYA 396
F +M QG PT T+S+ L A A+ + GK+ H AIV G+E D + ++L++ Y
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 397 KCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTA 455
K G I A +FD+M E++ VTWN +I G G ++AI + M E+ K D ++
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 456 VLTACCHVGLVELGQRLFNMMQEKYKIMPRTEH----YACMVDLLGRAGRLAEAYEMIKT 511
+++A ++LG+ + + Y I E + ++D+ + G + +A ++ +
Sbjct: 381 LMSAAARTENLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 512 MSTEPDLFVWGALLGACKNHG 532
+ E DL +W LL A G
Sbjct: 436 -TVEKDLILWNTLLAAYAESG 455
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 93 ALQSGKILHAQLIVS-GLARLTQIATKLITFYTECQNIHHARMLF-----DEIPKTNIHR 146
+L G+ +H +I + + L I T L+ Y +C +I+ A +F E+P +N
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSN--- 617
Query: 147 WIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHS-LV 205
A+ AYA G +EA+ ++ + GLK + I +VL AC H DI +I + +V
Sbjct: 618 --AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 206 LKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEAL 265
K S ++D+ + G EKA ++ +EM K M + + TE +
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 266 NLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDV-VSWTSV 321
+ + N + T+ + ++ G V K+ ++M+AKG++ SW +
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQI 792
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 20/234 (8%)
Query: 313 PDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEI 372
P S+ +S L N EA EM + IL C ++ GK+I
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 373 HGCAIVMGVEGDLHVR-----SALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCA 427
H + GD + R + LV YAKC + A LF K+ RN +W ++I
Sbjct: 93 HARILK---NGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 428 NHGYCDEAIELFNQMEERKKL-DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRT 486
G C+ A+ F +M E + D+ V AC + G+ + Y +
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG-----YVVKSGL 204
Query: 487 EH----YACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALL-GACKNHGNIE 535
E + + D+ G+ G L +A ++ + + + W AL+ G +N N E
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNGKNEE 257
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 265/490 (54%), Gaps = 53/490 (10%)
Query: 123 YTECQNIHHARMLFDE-IPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFV 181
+TE QN+ LF+ + KT++ W ++ AR G EA+ F M L
Sbjct: 22 HTERQNL---TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSS 78
Query: 182 IPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMV 241
P +KAC L DI +G++ H + +D FV S+LI MYS CG +E A+KVFDE+
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 242 EKDIVAMNAMVSGYVQRGLATEALNLVEEI-----------------------GTPRVKP 278
+++IV+ +M+ GY G A +A++L +++ RV
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 279 NVVT------------------WNTLISGFSKSGDQ--VMVSKLFQLMRAKGVEPDVVSW 318
+T NTL+ ++K G+ + K+F + V+ D VS+
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI----VDKDRVSY 254
Query: 319 TSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSA-TISSILPACASAANMRRGKEIHGCAI 377
S++S + ++EAF+ F+ ++ +A T+S++L A + + +R GK IH I
Sbjct: 255 NSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI 314
Query: 378 VMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIE 437
MG+E D+ V ++++DMY KCG + AR FD+M +N +W +MI G HG+ +A+E
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374
Query: 438 LFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLL 496
LF M + + ++++F +VL AC H GL G R FN M+ ++ + P EHY CMVDLL
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLL 434
Query: 497 GRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNM 556
GRAG L +AY++I+ M +PD +W +LL AC+ H N+ELAEI+ L EL+ + M
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYM 494
Query: 557 LLTDLYANAG 566
LL+ +YA+AG
Sbjct: 495 LLSHIYADAG 504
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 178/380 (46%), Gaps = 50/380 (13%)
Query: 96 SGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYA 155
SGK H Q V G +++ LI Y+ C + AR +FDEIPK NI W ++ Y
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 156 RRGYHQEAVTVFHEMHIQGLKQN--IFV----IPSVLKACGHLSDIGTGEKIHSLVLKHS 209
G +AV++F ++ + + +F+ + SV+ AC + G E IHS V+K
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 210 FGTDAFVVSSLIDMYSKC--GSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNL 267
F V ++L+D Y+K G V A+K+FD++V+KD V+ N+++S Y Q G++ EA +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 268 VEEIGTPRVKP-NVVTWNTLISGFSKSG---------DQVM------------------- 298
+ +V N +T +T++ S SG DQV+
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 299 -------VSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSA 351
K F M+ K V SWT++I+G + +A + F M+ G P
Sbjct: 334 KCGRVETARKAFDRMKNKNVR----SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 352 TISSILPACASAANMRRG-KEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDK 410
T S+L AC+ A G + + GVE L +VD+ + GF+ +A L +
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 411 MSER-NTVTWNSMIFGCANH 429
M + +++ W+S++ C H
Sbjct: 450 MKMKPDSIIWSSLLAACRIH 469
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
AL+ GK +H Q+I GL + T +I Y +C + AR FD + N+ W A+
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
Y G+ +A+ +F M G++ N SVL AC H G + + +K FG
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN-AMKGRFGV 420
Query: 213 DAFV--VSSLIDMYSKCGSVEKAKKVFDEM 240
+ + ++D+ + G ++KA + M
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 296/578 (51%), Gaps = 79/578 (13%)
Query: 67 MPIISRSFHLSPAAYSERIEIYIRD----------RALQSGKILHAQLIVSGLARLTQIA 116
+P S FH P++ S+ IR+ + LQS +I+HAQ+I GL
Sbjct: 10 VPSSSYPFHFLPSS-SDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYAL 68
Query: 117 TKLITF---YTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQ 173
+KLI F + + +A +F I + N+ W + +A A+ ++ M
Sbjct: 69 SKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL 128
Query: 174 GLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGS---- 229
GL N + P VLK+C G++IH VLK D +V +SLI MY + G
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 230 ---------------------------VEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLAT 262
+E A+K+FDE+ KD+V+ NAM+SGY + G
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 263 EALNLVEEIGTPRVKPNVVTWNTLISGFSKSGD-----QV-------------------- 297
EAL L +++ V+P+ T T++S ++SG QV
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 298 -MVSKLFQLMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSA 351
+ SK +L A G+ DV+SW ++I G H EA F+EML G P
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 352 TISSILPACASAANMRRGKEIHGC--AIVMGVEGDLHVRSALVDMYAKCGFISEARTLFD 409
T+ SILPACA + G+ IH + GV +R++L+DMYAKCG I A +F+
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 410 KMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVEL 468
+ ++ +WN+MIFG A HG D + +LF++M + + D ++F +L+AC H G+++L
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 469 GQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGAC 528
G+ +F M + YK+ P+ EHY CM+DLLG +G EA EMI M EPD +W +LL AC
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 529 KNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
K HGN+EL E A++L ++EPE+ + +LL+++YA+AG
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 270/482 (56%), Gaps = 13/482 (2%)
Query: 90 RDRALQSGKILHAQLIVSGLARLTQIATKLITFYT---ECQNIHHARMLFDEIPKTNIHR 146
R ++L + HA ++ +GL T A+KL+ F E + + +A + + I N
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 147 WIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVL 206
++ AYA + A+TVF EM + + + + VLKAC G +IH L +
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 207 KHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALN 266
K TD FV ++L+++Y + G E A+KV D M +D V+ N+++S Y+++GL EA
Sbjct: 168 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 267 LVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLV 326
L +E+ + NV +WN +ISG++ +G ++F M + DVVSW ++++
Sbjct: 228 LFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYA 279
Query: 327 HNFCNDEAFDTFKEMLSQGF-CPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDL 385
H C +E + F +ML P T+ S+L ACAS ++ +G+ +H G+E +
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 386 HVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EE 444
+ +ALVDMY+KCG I +A +F S+R+ TWNS+I + HG +A+E+F++M E
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 445 RKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAE 504
K + ++F VL+AC HVG+++ ++LF MM Y++ P EHY CMVDLLGR G++ E
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 505 AYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYAN 564
A E++ + + + +LLGACK G +E AE A L EL ++ +++LYA+
Sbjct: 460 AEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYAS 519
Query: 565 AG 566
G
Sbjct: 520 DG 521
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 262/505 (51%), Gaps = 36/505 (7%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R ++G+++H Q +V G + + ++ Y + + AR +FD +P+ + W +
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 152 GAYARRGYHQEAVTVFHEMHIQG-LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSF 210
Y + + E++ VF ++ + + + + +L A L ++ G +IHSL K
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 211 GTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
+ +V++ I +YSKCG ++ +F E + DIVA NAM+ GY G +L+L +E
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 271 IGTPRVKPNVVTWNTLISGFSKSGDQVMV--------------------------SKLFQ 304
+ + + +TL+S SG +++ SKL +
Sbjct: 313 LMLSGAR---LRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 305 LMRAKGV-----EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPA 359
+ A+ + E + SW ++ISG N ++A F+EM F P TI+ IL A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 360 CASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTW 419
CA + GK +H E ++V +AL+ MYAKCG I+EAR LFD M+++N VTW
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 420 NSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQE 478
N+MI G HG EA+ +F +M ++F VL AC H GLV+ G +FN M
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 479 KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAE 538
+Y P +HYACMVD+LGRAG L A + I+ MS EP VW LLGAC+ H + LA
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 539 IAAKHLSELEPESAANNMLLTDLYA 563
++ L EL+P++ ++LL+++++
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHS 634
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 217/490 (44%), Gaps = 53/490 (10%)
Query: 85 IEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNI 144
++ + R ++ HAQ+I+ G + TKL ++ I++AR +F + + ++
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 145 HRWIALTGAYARRGYHQEAVTVF-HEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHS 203
+ L ++ +++VF H LK N + A D G IH
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 204 LVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGY-------- 255
+ ++ + S+++ MY K VE A+KVFD M EKD + N M+SGY
Sbjct: 144 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 256 ---VQRGLATEALNLVEEIGTPRVKPNVVTWNTL-------------------------I 287
V R L E+ ++ + P V L I
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 288 SGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFC 347
S +SK G M S LF+ R +PD+V++ ++I G N + + FKE++ G
Sbjct: 264 SLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 348 PTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTL 407
S+T+ S++P + ++ IHG + V +AL +Y+K I AR L
Sbjct: 320 LRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 408 FDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLV 466
FD+ E++ +WN+MI G +G ++AI LF +M++ + + ++ T +L+AC +G +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 467 ELGQRLFNMMQE---KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGA 523
LG+ + ++++ + I T ++ + + G +AEA + M T+ + W
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVST----ALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNT 491
Query: 524 LLGACKNHGN 533
++ HG
Sbjct: 492 MISGYGLHGQ 501
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 5/228 (2%)
Query: 313 PDVVSWTSVISGLVHNFCNDEAFDTFKEML-SQGFCPTSATISSILPACASAANMRRGKE 371
PDV + ++ G N + F + S P S+T + + A + + R G+
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 372 IHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGY 431
IHG A+V G + +L + S +V MY K + +AR +FD+M E++T+ WN+MI G +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 432 CDEAIELFNQM--EERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHY 489
E+I++F + E +LD + +L A + + LG ++ ++ K
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT-KTGCYSHDYVL 259
Query: 490 ACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
+ L + G++ + + +PD+ + A++ ++G EL+
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELS 306
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 276/493 (55%), Gaps = 21/493 (4%)
Query: 84 RIEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNI----HHARMLFDEI 139
R +++ + +++ K +HA ++V+GL + +LI Y+ ++ +A LFDEI
Sbjct: 15 RPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEI 72
Query: 140 PKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGE 199
PK ++ + A+ ++ V+++ EM +G+ + + VLKAC L G
Sbjct: 73 PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 200 KIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRG 259
H V++H F + +V ++LI ++ CG + A ++FD+ + VA ++M SGY +RG
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 260 LATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWT 319
EA+ L +E+ + V WN +I+G K + +LF + E DVV+W
Sbjct: 193 KIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFD----RFTEKDVVTWN 244
Query: 320 SVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIH-----G 374
++ISG V+ EA FKEM G P TI S+L ACA ++ GK +H
Sbjct: 245 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 304
Query: 375 CAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDE 434
++ + + +AL+DMYAKCG I A +F + +R+ TWN++I G A H + +
Sbjct: 305 ASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEG 363
Query: 435 AIELFNQMEERKKL-DHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMV 493
+IE+F +M+ K + ++F V+ AC H G V+ G++ F++M++ Y I P +HY CMV
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 494 DLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAA 553
D+LGRAG+L EA+ +++M EP+ VW LLGACK +GN+EL + A + L + + +
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESG 483
Query: 554 NNMLLTDLYANAG 566
+ +LL+++YA+ G
Sbjct: 484 DYVLLSNIYASTG 496
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 281/545 (51%), Gaps = 69/545 (12%)
Query: 90 RDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIA 149
R ++ K LHAQ I + T A+ +I+ YT + +H A +LF + + W +
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 150 LTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS 209
+ + + +A+ F EM G + V PSVLK+C + D+ GE +H +++
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 210 FGTDAFVVSSLIDMYSKC---GS---------------------------------VEKA 233
D + ++L++MY+K GS ++
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 234 KKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKS 293
++VF+ M KD+V+ N +++GY Q G+ +AL +V E+GT +KP+ T ++++ FS+
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 294 GDQVMVSKLFQLMRAKGVEPDV-------------------------------VSWTSVI 322
D + ++ + KG++ DV +SW S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 323 SGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVE 382
+G V N +EA F++M++ P + SS++PACA A + GK++HG + G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 383 GDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM 442
++ + SALVDMY+KCG I AR +FD+M+ + V+W ++I G A HG+ EA+ LF +M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 443 EERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGR 501
+ + K + ++F AVLTAC HVGLV+ FN M + Y + EHYA + DLLGRAG+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 502 LAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDL 561
L EAY I M EP VW LL +C H N+ELAE A+ + ++ E+ +L+ ++
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 562 YANAG 566
YA+ G
Sbjct: 556 YASNG 560
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 158/319 (49%), Gaps = 5/319 (1%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
GK +H +I G+ I + L+ Y + I + +F + + W +L Y +
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
G + EA+ +F +M +K SV+ AC HL+ + G+++H VL+ FG++ F+
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRV 276
S+L+DMYSKCG+++ A+K+FD M D V+ A++ G+ G EA++L EE+ V
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 277 KPNVVTWNTLISGFSKSGDQVMVSKLFQLM-RAKGVEPDVVSWTSVISGLVHNFCNDEAF 335
KPN V + +++ S G F M + G+ ++ + +V L +EA+
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 336 DTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMY 395
+ +M + PT + S++L +C+ N+ +++ + E ++ + +MY
Sbjct: 501 NFISKMCVE---PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE-NMGAYVLMCNMY 556
Query: 396 AKCGFISEARTLFDKMSER 414
A G E L +M ++
Sbjct: 557 ASNGRWKEMAKLRLRMRKK 575
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L GK LH ++ G IA+ L+ Y++C NI AR +FD + + W A+
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGH--LSDIGTGEKIHSLVLKHSFG 211
+A G+ EAV++F EM QG+K N +VL AC H L D G +S+ +
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG-YFNSMTKVYGLN 477
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEM-VEKDIVAMNAMVSG-YVQRGLATEALNLVE 269
+ +++ D+ + G +E+A +M VE + ++S V + L A + E
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLEL-AEKVAE 536
Query: 270 EIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGV-EPDVVSWTSVISGLVHN 328
+I T + N+ + + + ++ +G ++KL MR KG+ + SW + H
Sbjct: 537 KIFTVDSE-NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE-MKNKTHG 594
Query: 329 FCNDE----AFDTFKEML 342
F + + + D E L
Sbjct: 595 FVSGDRSHPSMDKINEFL 612
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 258/506 (50%), Gaps = 40/506 (7%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
G+ LHA + + L + + L+ Y I + +F E+P N W A+
Sbjct: 127 GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVH 186
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
G ++E +T F EM + + LKAC L + G+ IH+ V+ F T V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRV 276
+SL MY++CG ++ +F+ M E+D+V+ +++ Y + G +A+ ++ +V
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Query: 277 KPNVVT---------------W--------------------NTLISGFSKSGDQVMVSK 301
PN T W N+++ +S G+ V S
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 302 LFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACA 361
LFQ MR + D++SW+++I G +E F F M G PT ++S+L
Sbjct: 367 LFQGMRCR----DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSG 422
Query: 362 SAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNS 421
+ A + G+++H A+ G+E + VRS+L++MY+KCG I EA +F + + V+ +
Sbjct: 423 NMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTA 482
Query: 422 MIFGCANHGYCDEAIELFNQ-MEERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKY 480
MI G A HG EAI+LF + ++ + D ++F +VLTAC H G ++LG FNMMQE Y
Sbjct: 483 MINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETY 542
Query: 481 KIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIA 540
+ P EHY CMVDLL RAGRL++A +MI MS + D VW LL ACK G+IE A
Sbjct: 543 NMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRA 602
Query: 541 AKHLSELEPESAANNMLLTDLYANAG 566
A+ + EL+P A + L ++Y++ G
Sbjct: 603 AERILELDPTCATALVTLANIYSSTG 628
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 44/443 (9%)
Query: 128 NIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHI--QGLKQNIFVIPSV 185
N+ AR +FD++P +I W ++ Y EA+ +F M + + + V+ V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 186 LKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDI 245
LKACG S+I GE +H+ +K S + +V SSL+DMY + G ++K+ +VF EM ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 246 VAMNAMVSGYVQRGLATEALNLVEEI--------------------GTPRVK-------- 277
V A+++G V G E L E+ G +VK
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 278 -------PNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFC 330
+ N+L + +++ G+ LF+ M E DVVSWTS+I
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS----ERDVVSWTSLIVAYKRIGQ 290
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSA 390
+A +TF +M + P T +S+ ACAS + + G+++H + +G+ L V ++
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 391 LVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEER-KKLD 449
++ MY+ CG + A LF M R+ ++W+++I G G+ +E + F+ M + K
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 450 HLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMI 509
+ ++L+ ++ ++E G R + + + + + + ++++ + G + EA MI
Sbjct: 411 DFALASLLSVSGNMAVIE-GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA-SMI 468
Query: 510 KTMSTEPDLFVWGALLGACKNHG 532
+ D+ A++ HG
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHG 491
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 76/420 (18%)
Query: 92 RALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALT 151
R ++ GK +H +IV G +A L T YTEC + LF+ + + ++ W +L
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
AY R G +AV F +M + N S+ AC LS + GE++H VL
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
V +S++ MYS CG++ A +F M +DI++ + ++ GY Q G E +
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 272 GTPRVKP-----------------------------------NVVTWNTLISGFSKSGDQ 296
KP N ++LI+ +SK G
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 297 VMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSI 356
S +F + D+VS T++I+G + + EA D F++ L GF P S T S+
Sbjct: 463 KEASMIF----GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 357 LPACASAA----------------NMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGF 400
L AC + NMR KE +GC +VD+ + G
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC---------------MVDLLCRAGR 563
Query: 401 ISEARTLFDKMS-ERNTVTWNSMIFGCANHGYCDEAIELFNQMEER-KKLDHLSFTAVLT 458
+S+A + ++MS +++ V W +++ C G IE + ER +LD TA++T
Sbjct: 564 LSDAEKMINEMSWKKDDVVWTTLLIACKAKG----DIERGRRAAERILELDPTCATALVT 619
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 38/335 (11%)
Query: 228 GSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVE--EIGTPRVKPNVVTWNT 285
G++ A++VFD+M DIV+ +++ YV + EAL L + V P+ +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 286 LISGFSKS------------------------GDQVM-----VSKLFQLMRAKGVEP--D 314
++ +S G ++ V K+ + R P +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 315 VVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHG 374
V+WT++I+GLVH E F EM + T + L ACA ++ GK IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 375 CAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDE 434
IV G L V ++L MY +CG + + LF+ MSER+ V+W S+I G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 435 AIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLF-NMMQEKYKIMPRTEHYACM 492
A+E F +M + + +F ++ +AC + + G++L N++ + M
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDSLSVSNSM 351
Query: 493 VDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGA 527
+ + G L A + + M D+ W ++G
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 377 IVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAI 436
+++ + + H+RS + G + AR +FDKM + V+W S+I DEA+
Sbjct: 37 VMVKFDPNSHLRSLI-----NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEAL 91
Query: 437 ELFNQMEERKKLDHL------SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYA 490
LF+ M + +DH + VL AC + G+ L + K ++ +
Sbjct: 92 ILFSAM---RVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL-HAYAVKTSLLSSVYVGS 147
Query: 491 CMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALL 525
++D+ R G++ ++ + M + W A++
Sbjct: 148 SLLDMYKRVGKIDKSCRVFSEMPFR-NAVTWTAII 181
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 266/508 (52%), Gaps = 43/508 (8%)
Query: 98 KILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARR 157
+++HA LI S + T + + +C ++ +A +F+ +P+ + W A+ + +
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 158 GYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVV 217
G+ +A ++F EM + + + + +++++ + E +H++ ++ V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 218 SSLIDMYSKCGSVEKAKKVFDEMVEKD--IVAMNAMVSGYVQRGLATEALNLVEEIGTPR 275
++ I Y KCG ++ AK VF+ + D +V+ N+M Y G A +A L +
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 276 VKPNVVTW-----------------------------------NTLISGFSKSGDQVMVS 300
KP++ T+ NT IS +SKS D
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 301 KLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
LF +M ++ VSWT +ISG DEA F M+ G P T+ S++ C
Sbjct: 312 LLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 361 ASAANMRRGKEIHGCAIVMGVEGD-LHVRSALVDMYAKCGFISEARTLFDKMSERNTVTW 419
++ GK I A + G + D + + +AL+DMY+KCG I EAR +FD E+ VTW
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 420 NSMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQE 478
+MI G A +G EA++LF++M + K +H++F AVL AC H G +E G F++M++
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 479 KYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAE 538
Y I P +HY+CMVDLLGR G+L EA E+I+ MS +PD +WGALL ACK H N+++AE
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 539 IAAKHLSELEPESAANNMLLTDLYANAG 566
AA+ L LEP+ AA + + ++YA AG
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAG 575
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 199/436 (45%), Gaps = 67/436 (15%)
Query: 142 TNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKI 201
++++ W R E++ +F EM G + N F P V KAC L+D+G E +
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 202 HSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLA 261
H+ ++K F +D FV ++ +DM+ KC SV+ A KVF+ M E+D NAM+SG+ Q G
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 262 TEALNLVEEIGTPRVKPNVVTWNTLI--SGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWT 319
+A +L E+ + P+ VT TLI + F KS KL + M A G+ V
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS------LKLLEAMHAVGIRLGVDVQV 188
Query: 320 SVISGLVHNF--CND--------------------------------EAFDTFK---EML 342
+V + + + C D EAFD F ML
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 343 SQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFIS 402
+ F P +T ++ +C + + +G+ IH AI +G + D+ + + MY+K
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 403 EARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFTAVLTACC 461
AR LFD M+ R V+W MI G A G DEA+ LF+ M + +K D ++ ++++ C
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 462 HVGLVELGQRLFNMMQEKYKIMPRTEHYAC----------MVDLLGRAGRLAEAYEMIKT 511
G +E G+ I R + Y C ++D+ + G + EA ++
Sbjct: 369 KFGSLETGKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 512 MSTEPDLFVWGALLGA 527
+ E + W ++
Sbjct: 419 -TPEKTVVTWTTMIAG 433
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 5/276 (1%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
L G+++H+ I G + + I+ Y++ ++ AR+LFD + W +
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
YA +G EA+ +FH M G K ++ + S++ CG + TG+ I + + D
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 214 -AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
+ ++LIDMYSKCGS+ +A+ +FD EK +V M++GY G+ EAL L ++
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 273 TPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMR-AKGVEPDVVSWTSVISGLVHNFCN 331
KPN +T+ ++ + SG + F +M+ + P + ++ ++ L
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 332 DEAFDTFKEMLSQGFCPTSATISSILPACASAANMR 367
+EA + + M ++ P + ++L AC N++
Sbjct: 512 EEALELIRNMSAK---PDAGIWGALLNACKIHRNVK 544
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 304 QLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASA 363
+L R G+ V +W I V+ E+ F+EM GF P + T + ACA
Sbjct: 7 RLYRISGLSS-VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 364 ANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMI 423
A++ + +H I D+ V +A VDM+ KC + A +F++M ER+ TWN+M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 424 FGCANHGYCDEAIELFNQM 442
G G+ D+A LF +M
Sbjct: 126 SGFCQSGHTDKAFSLFREM 144
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 259/484 (53%), Gaps = 45/484 (9%)
Query: 89 IRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWI 148
I L++ K H +I++GL R K I + ++ +A +F P N +
Sbjct: 23 IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 149 ALTGAYA---RRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLV 205
+ A + H A+TV+ ++ K + F P VLK +SD+ G +IH V
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 206 LKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEAL 265
+ F + VV+ LI MY CG + A+K+FDEM+ KD+
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV-------------------- 182
Query: 266 NLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGL 325
NV WN L++G+ K G+ L ++M + VSWT VISG
Sbjct: 183 -------------NV--WNALLAGYGKVGEMDEARSLLEMMPCW--VRNEVSWTCVISGY 225
Query: 326 VHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIV--MGVEG 383
+ EA + F+ ML + P T+ ++L ACA ++ G+ I C+ V G+
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI--CSYVDHRGMNR 283
Query: 384 DLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME 443
+ + +A++DMYAK G I++A +F+ ++ERN VTW ++I G A HG+ EA+ +FN+M
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 444 ERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRL 502
+ + + ++F A+L+AC HVG V+LG+RLFN M+ KY I P EHY CM+DLLGRAG+L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 503 AEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLY 562
EA E+IK+M + + +WG+LL A H ++EL E A L +LEP ++ N MLL +LY
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 563 ANAG 566
+N G
Sbjct: 464 SNLG 467
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 85 IEIYIRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNI 144
++I +R + G+ +H Q++V G + T LI Y C + AR +FDE+ ++
Sbjct: 123 LKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV 182
Query: 145 HRWIAL---------------------------------TGAYARRGYHQEAVTVFHEMH 171
+ W AL YA+ G EA+ VF M
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 172 IQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVE 231
++ ++ + + +VL AC L + GE+I S V + +++IDMY+K G++
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 232 KAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFS 291
KA VF+ + E+++V +++G G EAL + + V+PN VT+ ++S S
Sbjct: 303 KALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 292 KSGDQVMVSKLFQLMRAK-GVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTS 350
G + +LF MR+K G+ P++ + +I L EA + K M F +
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM---PFKANA 419
Query: 351 ATISSILPA 359
A S+L A
Sbjct: 420 AIWGSLLAA 428
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 262/480 (54%), Gaps = 46/480 (9%)
Query: 94 LQSGKILHAQLIVSGLARLTQ-IATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
L K +H +IVSG L + L+ FY E N A +F +P ++ + +
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHS--F 210
YA++G+ EA+ ++ +M G++ + + + S+L CGHLSDI G+ +H + + +
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 211 GTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
++ + ++L+DMY KC AK+ FD M +KD+ + N MV G+V+ G A + ++
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 271 IGTPRVKPNVVTWNTLISGFSKSG-DQVMVSKL-FQLMRAKGVEPDVVSWTSVISGLVHN 328
+ K ++V+WN+L+ G+SK G DQ V +L +++ + V+PD V+ S+ISG
Sbjct: 326 MP----KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG---- 377
Query: 329 FCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVR 388
A+ + G+ +HG I + ++GD +
Sbjct: 378 -------------------------------AANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 389 SALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKK 447
SAL+DMY KCG I A +F +E++ W SMI G A HG +A++LF +M EE
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 448 LDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYE 507
++++ AVLTAC H GLVE G +FN M++K+ P TEHY +VDLL RAGR+ EA +
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 508 MI-KTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
++ K M P +WG++L AC+ +IE AE+A L +LEPE +LL+++YA G
Sbjct: 527 IVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVG 586
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 270/526 (51%), Gaps = 35/526 (6%)
Query: 76 LSPAAYSERIEIYIRDRALQSGKILHAQLIVSGLARLTQ-IATKLITFYTECQNIHHARM 134
LS A ++ I +++ G+++HA+++ + + +A LI Y++ + AR+
Sbjct: 4 LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 135 LFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSD 194
+ P N+ W +L A+ G+ A+ F EM +G+ N F P KA L
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 195 IGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSG 254
TG++IH+L +K D FV S DMY K + A+K+FDE+ E+++ NA +S
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 255 YVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPD 314
V G EA+ E PN +T+ ++ S + +L L+ G + D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 315 V-------------------------------VSWTSVISGLVHNFCNDEAFDTFKEMLS 343
V VSW S+++ V N +++A +
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 344 QGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISE 403
+ ISS+L ACA A + G+ IH A+ VE + V SALVDMY KCG I +
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIED 363
Query: 404 ARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEER---KKLDHLSFTAVLTAC 460
+ FD+M E+N VT NS+I G A+ G D A+ LF +M R ++++F ++L+AC
Sbjct: 364 SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 423
Query: 461 CHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFV 520
G VE G ++F+ M+ Y I P EHY+C+VD+LGRAG + AYE IK M +P + V
Sbjct: 424 SRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Query: 521 WGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYANAG 566
WGAL AC+ HG +L +AA++L +L+P+ + N++LL++ +A AG
Sbjct: 484 WGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 529
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 266/507 (52%), Gaps = 40/507 (7%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
GK LHAQ+I + LI Y + A +F IP ++ W ++ +++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 157 RGYHQEAVTVFHEMHIQGL-KQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAF 215
G+ EA++ EM G+ N ++ S LKAC L G +IH L +K +A
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 216 VVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPR 275
SL DMY++CG + A++VFD++ D + N +++G G A EA+++ ++ +
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 276 VKPN--------------------------VVTW---------NTLISGFSKSGDQVMVS 300
P+ ++ W N+L++ ++ D
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 301 KLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPAC 360
LF+ R D VSW ++++ + + E FK ML P T+ ++L C
Sbjct: 427 NLFEDFRNNA---DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 361 ASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWN 420
++++ G ++H ++ G+ + +++ L+DMYAKCG + +AR +FD M R+ V+W+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 421 SMIFGCANHGYCDEAIELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEK 479
++I G A G+ +EA+ LF +M+ + +H++F VLTAC HVGLVE G +L+ MQ +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 480 YKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEI 539
+ I P EH +C+VDLL RAGRL EA I M EPD+ VW LL ACK GN+ LA+
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 540 AAKHLSELEPESAANNMLLTDLYANAG 566
AA+++ +++P ++ ++LL ++A++G
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSG 690
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 249/537 (46%), Gaps = 45/537 (8%)
Query: 56 INGIFIEAHYKMPIISRSFHLSPAAYSERIEIYIR-------DRALQSGKILHAQLIVSG 108
IN + Y+ + + F +++ R+ YI R+L G+ +H ++ S
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 109 LARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFH 168
T + +++ Y +C ++ AR +FD +P+ N+ + ++ Y++ G EA+ ++
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 169 EMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCG 228
+M + L + F S++KAC SD+G G+++H+ V+K + ++LI MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 229 SVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRV-KPNVVTWNTLI 287
+ A +VF + KD+++ +++++G+ Q G EAL+ ++E+ + V PN + + +
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 288 SGFSK-----SGDQV---------------------MVSKLFQLMRAKGV-----EPDVV 316
S G Q+ M ++ L A+ V PD
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTA 337
Query: 317 SWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCA 376
SW +I+GL +N DEA F +M S GF P + ++ S+L A + +G +IH
Sbjct: 338 SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI 397
Query: 377 IVMGVEGDLHVRSALVDMYAKCGFISEARTLF-DKMSERNTVTWNSMIFGCANHGYCDEA 435
I G DL V ++L+ MY C + LF D + ++V+WN+++ C H E
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 436 IELFNQMEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVD 494
+ LF M + + DH++ +L C + ++LG ++ + K + P ++D
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLID 516
Query: 495 LLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSE--LEP 549
+ + G L +A + +M D+ W L+ G E A I K + +EP
Sbjct: 517 MYAKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 9/305 (2%)
Query: 72 RSFHLSPAAYSERIEIYIRDR--ALQSGKILHAQLIVSG-LARLTQIATKLITFYTECQN 128
RS P A S R + + + AL G +H+ +I G LA LT + L+T YT C +
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT-VCNSLLTMYTFCSD 421
Query: 129 IHHARMLFDEIPKT-NIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLK 187
++ LF++ + W + A + E + +F M + + + + ++L+
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 188 ACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVA 247
C +S + G ++H LK + F+ + LIDMY+KCGS+ +A+++FD M +D+V+
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 248 MNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMR 307
+ ++ GY Q G EAL L +E+ + ++PN VT+ +++ S G KL+ M+
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 308 AK-GVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANM 366
+ G+ P + V+ L +EA EM + P ++L AC + N+
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE---PDVVVWKTLLSACKTQGNV 658
Query: 367 RRGKE 371
++
Sbjct: 659 HLAQK 663
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
+L+ G +H + +GLA I LI Y +C ++ AR +FD + ++ W L
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIH-SLVLKHSFG 211
YA+ G+ +EA+ +F EM G++ N VL AC H+ + G K++ ++ +H
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEM-VEKDIVAMNAMVSGYVQRGLATEALNLVEE 270
S ++D+ ++ G + +A++ DEM +E D+V ++S +G A E
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 271 I 271
I
Sbjct: 668 I 668
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 268/487 (55%), Gaps = 36/487 (7%)
Query: 115 IATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQG 174
+AT LI Y E + AR LFDE+P ++ W A+ YA Y+ A FHEM QG
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 175 LKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCG-SVEKA 233
N F + SVLK+C ++ + G +H +V+K +V +++++MY+ C ++E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 234 KKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEE--IGTPRVKPNVVTWNTLISGFS 291
+F ++ K+ V +++G+ G L + ++ + V P +T S
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 292 KS---GDQV---MVSKLFQ------------------LMRAKGV-----EPDVVSWTSVI 322
S G Q+ ++ + FQ L AK + D+++W ++I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 323 SGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVE 382
S L + + EA F+ SQGF P T +S++ ACA+ A + G+++HG G
Sbjct: 287 SELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 383 GDLHVRSALVDMYAKCGFISEARTLFDKMSER-NTVTWNSMIFGCANHGYCDEAIELFNQ 441
++ + +AL+DMYAKCG I +++ +F ++ +R N V+W SM+ G +HGY EA+ELF++
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 442 MEERK-KLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAG 500
M + D + F AVL+AC H GLVE G + FN+M+ +Y I P + Y C+VDLLGRAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 501 RLAEAYEMIKTMSTEPDLFVWGALLGACKNHG-NIELAEIAAKHLSELEPESAANNMLLT 559
++ EAYE+++ M +PD WGA+LGACK H N ++ +AA+ + EL+P+ ++L+
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 560 DLYANAG 566
+YA G
Sbjct: 526 YIYAAEG 532
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 137/272 (50%), Gaps = 6/272 (2%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTG 152
++ +GK +HA +I G + ++ Y C + A+ F E+ ++ W L
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGT 212
R EA+ +F QG N + S++ AC +++ + G+++H + + F
Sbjct: 288 ELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 213 DAFVVSSLIDMYSKCGSVEKAKKVFDEMVE-KDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ + ++LIDMY+KCG++ +++VF E+V+ +++V+ +M+ GY G EA+ L +++
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 272 GTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAK-GVEPDVVSWTSVISGLVHNFC 330
+ ++P+ + + ++S +G K F +M ++ G+ PD + V+ L
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 331 NDEAFDTFKEMLSQGFCPTSATISSILPACAS 362
EA++ + M F P +T +IL AC +
Sbjct: 467 IGEAYELVERM---PFKPDESTWGAILGACKA 495
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 24/273 (8%)
Query: 93 ALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEI-PKTNIHRWIALT 151
AL G+ LH ++ G + ++A LI Y +C NI ++ +F EI + N+ W ++
Sbjct: 328 ALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Query: 152 GAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFG 211
Y GY EAV +F +M G++ + V +VL AC H + G K + V++ +G
Sbjct: 388 IGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-VMESEYG 446
Query: 212 --TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVE 269
D + + ++D+ + G + +A ++ + M K + + G + A + L+
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACK---AHKHNGLIS 503
Query: 270 EIGTPRV---KPNVV-TWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDV-VSWTSVISG 324
+ +V KP +V T+ L ++ G V +++ ++MR G + + +SW
Sbjct: 504 RLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI----- 558
Query: 325 LVHNFCNDEAFDTFKEMLSQGFCPTSATISSIL 357
LV N F +S CP ++++ S+L
Sbjct: 559 LVEN-------QVFSFAVSDKMCPNASSVYSVL 584
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 250/469 (53%), Gaps = 46/469 (9%)
Query: 98 KILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYARR 157
K LHA + +G+ + +L+ N+ +AR LFD + + L AY
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 158 GYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVV 217
E++ +++ + GL+ + + A S +HS + F +D+F
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 218 SSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVK 277
++LI Y+K G++ A++VFDEM ++D
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRD--------------------------------- 147
Query: 278 PNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDT 337
V WN +I+G+ + GD +LF M K +V SWT+VISG N EA
Sbjct: 148 --VPVWNAMITGYQRRGDMKAAMELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKM 201
Query: 338 FKEM-LSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYA 396
F M + P T+ S+LPACA+ + G+ + G A G +++V +A ++MY+
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYS 261
Query: 397 KCGFISEARTLFDKM-SERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLSFT 454
KCG I A+ LF+++ ++RN +WNSMI A HG DEA+ LF QM E +K D ++F
Sbjct: 262 KCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 321
Query: 455 AVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMST 514
+L AC H G+V GQ LF M+E +KI P+ EHY CM+DLLGR G+L EAY++IKTM
Sbjct: 322 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 381
Query: 515 EPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYA 563
+PD VWG LLGAC HGN+E+AEIA++ L +LEP + N ++++++YA
Sbjct: 382 KPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYA 430
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 40/218 (18%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEI-PKTNIHRWIALTG 152
L+ G+ L +G + I Y++C I A+ LF+E+ + N+ W ++ G
Sbjct: 231 LEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIG 290
Query: 153 AYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKI-HSLVLKHSFG 211
+ A G H EA+T+F +M +G K + +L AC H + G+++ S+ H
Sbjct: 291 SLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKIS 350
Query: 212 TDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEI 271
+ID+ + G +++A + I
Sbjct: 351 PKLEHYGCMIDLLGRVGKLQEAYDL----------------------------------I 376
Query: 272 GTPRVKPNVVTWNTLISGFSKSGD----QVMVSKLFQL 305
T +KP+ V W TL+ S G+ ++ LF+L
Sbjct: 377 KTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 255/509 (50%), Gaps = 73/509 (14%)
Query: 92 RALQSGKILHAQLIVSGLARL-TQIATKLITFYTEC---------------QNIH----- 130
++L+ GK +H L ++G R T ++ LI Y +C +N++
Sbjct: 60 KSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNM 119
Query: 131 -----------HARMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNI 179
AR++FD +P+ ++ W + YA+ G EA+ + E G+K N
Sbjct: 120 VSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNE 179
Query: 180 FVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDE 239
F +L AC + + H VL F ++ + S+ID Y+KCG +E AK+ FDE
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 240 MVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMV 299
M KDI W TLISG++K GD
Sbjct: 240 MTVKDIH-----------------------------------IWTTLISGYAKLGDMEAA 264
Query: 300 SKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPA 359
KLF M E + VSWT++I+G V + A D F++M++ G P T SS L A
Sbjct: 265 EKLFCEM----PEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 360 CASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSER-NTVT 418
AS A++R GKEIHG I V + V S+L+DMY+K G + + +F ++ + V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 419 WNSMIFGCANHGYCDEAIELFNQMEE-RKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQ 477
WN+MI A HG +A+ + + M + R + + + +L AC H GLVE G R F M
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
Query: 478 EKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELA 537
++ I+P EHYAC++DLLGRAG E I+ M EPD +W A+LG C+ HGN EL
Sbjct: 441 VQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELG 500
Query: 538 EIAAKHLSELEPESAANNMLLTDLYANAG 566
+ AA L +L+PES+A +LL+ +YA+ G
Sbjct: 501 KKAADELIKLDPESSAPYILLSSIYADHG 529
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 182/381 (47%), Gaps = 11/381 (2%)
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
+A + +AV+ + QG++ ++ S+L+ CG + G+ IH + F
Sbjct: 21 HATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRP 80
Query: 214 AFVVSS-LIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIG 272
++S+ LI MY KCG A KVFD+M +++ + N MVSGYV+ G+ A + + +
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 273 TPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCND 332
+ +VV+WNT++ G+++ G+ ++ R G++ + S+ +++ V +
Sbjct: 141 ----ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ 196
Query: 333 EAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALV 392
++L GF SI+ A A M K C M V+ D+H+ + L+
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR---CFDEMTVK-DIHIWTTLI 252
Query: 393 DMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQMEERK-KLDHL 451
YAK G + A LF +M E+N V+W ++I G G + A++LF +M K +
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 452 SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKT 511
+F++ L A + + G+ + M + + P + ++D+ ++G L + + +
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 512 MSTEPDLFVWGALLGACKNHG 532
+ D W ++ A HG
Sbjct: 372 CDDKHDCVFWNTMISALAQHG 392
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 89 IRDRALQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIH--- 145
++ R LQ + H Q++V+G ++ +I Y +C + A+ FDE+ +IH
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 146 ----------------------------RWIALTGAYARRGYHQEAVTVFHEMHIQGLKQ 177
W AL Y R+G A+ +F +M G+K
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 178 NIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVF 237
F S L A ++ + G++IH +++ + +A V+SSLIDMYSK GS+E +++VF
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 238 DEMVEK-DIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQ 296
+K D V N M+S Q GL +AL +++++ RV+PN T +++ S SG
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 297 VMVSKLFQLMRAK-GVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISS 355
+ F+ M + G+ PD + +I L C E +EM F P ++
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM---PFEPDKHIWNA 486
Query: 356 ILPACASAANMRRGKE 371
IL C N GK+
Sbjct: 487 ILGVCRIHGNEELGKK 502
>sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protein At2g02750
OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2
Length = 613
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 272/540 (50%), Gaps = 79/540 (14%)
Query: 97 GKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGAYAR 156
G+ILHAQ++ +G AT L++ Y + + + A + DE+P+ I A
Sbjct: 50 GRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLE 109
Query: 157 RGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFV 216
G+ ++A +F + + G N + SVL CG DI G ++H L +K F + +V
Sbjct: 110 NGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYV 166
Query: 217 VSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRG---LATEALNLVEEIGT 273
+SL+ MYS+CG A ++F+++ K +V NA +SG ++ G L NL+ + +
Sbjct: 167 GTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS 226
Query: 274 PRVKPNVVTWNTLISG--------FSKSGDQVMVSKLFQLMRAKGV-------------- 311
+PN VT+ I+ + + +++ K FQ G
Sbjct: 227 E--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKS 284
Query: 312 ----------EPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSAT--------- 352
+++SW SVISG++ N ++ A + F+++ S+G P SAT
Sbjct: 285 AYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFS 344
Query: 353 --------------------------ISSILPACASAANMRRGKEIHGCAIVMGVEGDLH 386
++S+L AC+ ++ GKEIHG I E D+
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 387 VRSALVDMYAKCGFISEARTLFDKM--SERNTVTWNSMIFGCANHGYCDEAIELFNQMEE 444
V ++L+DMY KCG S AR +FD+ ++ V WN MI G HG C+ AIE+F + E
Sbjct: 405 VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLRE 464
Query: 445 RKKLDHL-SFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLA 503
K L +FTAVL+AC H G VE G ++F +MQE+Y P TEH CM+DLLGR+GRL
Sbjct: 465 EKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLR 524
Query: 504 EAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYA 563
EA E+I MS +LLG+C+ H + L E AA L+ELEPE+ A ++L+ +YA
Sbjct: 525 EAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYA 583
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 190/416 (45%), Gaps = 56/416 (13%)
Query: 178 NIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVF 237
N F P +LK+C L D+ G +H+ V+K F D F ++L+ MY K V A KV
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 238 DEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGTPRVKPNVVT--------------- 282
DEM E+ I ++NA VSG ++ G +A + + N VT
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 283 -----------------WNTLISGFSKSGDQVMVSKLFQLMRAKGVEPDVVSWTSVISGL 325
+L+S +S+ G+ V+ +++F+ + K VV++ + ISGL
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK----SVVTYNAFISGL 205
Query: 326 VHNFCND---EAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAIVMGVE 382
+ N + F+ ++ S+ P T + + ACAS N++ G+++HG + +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 383 GDLHVRSALVDMYAKCGFISEARTLFDKMSE-RNTVTWNSMIFGCANHGYCDEAIELFNQ 441
+ V +AL+DMY+KC A +F ++ + RN ++WNS+I G +G + A+ELF +
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 442 ME-ERKKLDHLSFTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAG 500
++ E K D ++ ++++ +G V + F M + C+ LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV----PSLKCLTSLLSACS 379
Query: 501 RL------AEAYEMIKTMSTEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPE 550
+ E + + + E D+FV +L+ G L+ A + EP+
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCG---LSSWARRIFDRFEPK 432
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 348 PTSATISSILPACASAANMRRGKEIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTL 407
P T +L +CA ++ +G+ +H + G D+ +ALV MY K +++A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 408 FDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQME-ERKKLDHLSFTAVLTACCHVGLV 466
D+M ER + N+ + G +G+C +A +F ++ ++ +VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 467 ELGQRL 472
E G +L
Sbjct: 146 EGGMQL 151
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 246/471 (52%), Gaps = 58/471 (12%)
Query: 135 LFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGL-KQNIFVIPSVLKACGHLS 193
+F+ +P + W L Y+ + E V++ M GL + + + P V+K C +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 194 DIGTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVS 253
+ G +H LVL+ F D V +S +D Y KC + A+KVF EM E++ V+ A+V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 254 GYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLISGFSKSGDQVMVSKLFQLM------- 306
YV+ G EA ++ + + + N+ +WN L+ G KSGD V KLF M
Sbjct: 185 AYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 307 ----------------------RAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQ 344
A+GV DV +W+++I G N +EAF F EM ++
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 345 GFCPTSATISSILPACASAANMRRGKEIHGC-AIVMGVEGDLHVR----------SALVD 393
P + ++ AC+ GC + V+ LH R AL+D
Sbjct: 299 NVKPDEFIMVGLMSACSQM----------GCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 394 MYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIELFNQM-EERKKLDHLS 452
M AKCG + A LF++M +R+ V++ SM+ G A HG EAI LF +M +E D ++
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 453 FTAVLTACCHVGLVELGQRLFNMMQEKYKIMPRTEHYACMVDLLGRAGRLAEAYEMIKTM 512
FT +L C LVE G R F +M++KY I+ +HY+C+V+LL R G+L EAYE+IK+M
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 513 STEPDLFVWGALLGACKNHGNIELAEIAAKHLSELEPESAANNMLLTDLYA 563
E WG+LLG C HGN E+AE+ A+HL ELEP+SA + +LL+++YA
Sbjct: 469 PFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYA 519
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 54/377 (14%)
Query: 94 LQSGKILHAQLIVSGLARLTQIATKLITFYTECQNIHHARMLFDEIPKTNIHRWIALTGA 153
++ G +H ++ G + + T + FY +C+++ AR +F E+P+ N W AL A
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 154 YARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHLSDIGTGEKIHSLVLKHSFGTD 213
Y + G +EA ++F M + L ++ ++K+ D+ +K+ + K D
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKR----D 237
Query: 214 AFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMVSGYVQRGLATEALNLVEEIGT 273
+S+ID Y+K G + A+ +F+E D+ A +A++ GY Q G EA + E+
Sbjct: 238 IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA 297
Query: 274 PRVKPNVVTWNTLISGFS------------------------------------KSGDQV 297
VKP+ L+S S K G
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 298 MVSKLFQLMRAKGVEPDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSIL 357
+KLF+ M + D+VS+ S++ G+ + C EA F++M+ +G P + IL
Sbjct: 358 RAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 358 PACASAANMRRGK---EIHGCAIVMGVEGDLHVRSALVDMYAKCGFISEARTLFDKMS-E 413
C + + G E+ + D + S +V++ ++ G + EA L M E
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYELIKSMPFE 471
Query: 414 RNTVTWNSMIFGCANHG 430
+ W S++ GC+ HG
Sbjct: 472 AHASAWGSLLGGCSLHG 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,292,594
Number of Sequences: 539616
Number of extensions: 7822668
Number of successful extensions: 27033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 17818
Number of HSP's gapped (non-prelim): 2389
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)