BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036172
(522 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 132/243 (54%), Gaps = 4/243 (1%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGE-QSVLPWGVR 259
F +EV++ S +++ L G C+ +LV ++ GS+ L E Q L W R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A+ A L YLH C +IHRDVK++NILL +F+ + DFGLA H +
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VX 200
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES--LVKWA 377
V GT G+IAPEYL GK S+K DV+ +GV+LLEL++G+R L + L+ W
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 378 KPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHA 437
K +LK E L+D L Y + ++++++ A LC SP RP M +V+++L G A
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
Query: 438 TDW 440
W
Sbjct: 321 ERW 323
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 131/243 (53%), Gaps = 4/243 (1%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGE-QSVLPWGVR 259
F +EV++ S +++ L G C+ +LV ++ GS+ L E Q L W R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A+ A L YLH C +IHRDVK++NILL +F+ + DFGLA H +
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VX 192
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES--LVKWA 377
V G G+IAPEYL GK S+K DV+ +GV+LLEL++G+R L + L+ W
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 378 KPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHA 437
K +LK E L+D L Y + ++++++ A LC SP RP M +V+++L G A
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
Query: 438 TDW 440
W
Sbjct: 313 ERW 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 146/261 (55%), Gaps = 6/261 (2%)
Query: 170 LFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYL 229
+F K+ R + LK+ T + S +F +E++ S + +L G C E N +
Sbjct: 51 VFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110
Query: 230 ILVSDFLPKGSLEESLHGAGEQSV-LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
IL+ ++ G+L+ L+G+ ++ + W R E+ + A L+YLH+ R +IHRDVKS
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKS 167
Query: 289 SNILLSSDFQPQLSDFGLAIWGP-TDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYS 347
NILL +F P+++DFG++ G D TH+ V GT GYI PEY + G++++K DVYS
Sbjct: 168 INILLDENFVPKITDFGISKKGTELDQTHL-XXVVKGTLGYIDPEYFIKGRLTEKSDVYS 226
Query: 348 FGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRML 407
FGVVL E+L R I + +L +WA NG E ++DP L+++ +++
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFG 286
Query: 408 LAANLCINQSPQLRPNMGQVL 428
A C+ S + RP+MG VL
Sbjct: 287 DTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 170 LFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYL 229
+F K+ R + LK+ T + S +F +E++ S + +L G C E N +
Sbjct: 51 VFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110
Query: 230 ILVSDFLPKGSLEESLHGAGEQSV-LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
IL+ ++ G+L+ L+G+ ++ + W R E+ + A L+YLH+ R +IHRDVKS
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKS 167
Query: 289 SNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSF 348
NILL +F P+++DFG++ G + V GT GYI PEY + G++++K DVYSF
Sbjct: 168 INILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSF 227
Query: 349 GVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLL 408
GVVL E+L R I + +L +WA NG E ++DP L+++ +++
Sbjct: 228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD 287
Query: 409 AANLCINQSPQLRPNMGQVL 428
A C+ S + RP+MG VL
Sbjct: 288 TAVKCLALSSEDRPSMGDVL 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 16/251 (6%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEES 244
EELKQ F E+ + + + +++ L G + + L LV ++P GSL +
Sbjct: 65 EELKQ----------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 114
Query: 245 LHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDF 304
L L W +R ++A A +N+LH IHRD+KS+NILL F ++SDF
Sbjct: 115 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 171
Query: 305 GLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGF 364
GLA + ++ +VGT Y+APE L G+++ K D+YSFGVVLLE+++G +
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV-- 228
Query: 365 KNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNM 424
+ P+ L+ + I T K N+ D+ ++ M A+ C+++ RP++
Sbjct: 229 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 288
Query: 425 GQVLKLLRGAT 435
+V +LL+ T
Sbjct: 289 KKVQQLLQEMT 299
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 16/251 (6%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEES 244
EELKQ F E+ + + + +++ L G + + L LV ++P GSL +
Sbjct: 71 EELKQ----------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 245 LHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDF 304
L L W +R ++A A +N+LH IHRD+KS+NILL F ++SDF
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 177
Query: 305 GLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGF 364
GLA + ++ +VGT Y+APE L G+++ K D+YSFGVVLLE+++G +
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV-- 234
Query: 365 KNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNM 424
+ P+ L+ + I T K N+ D+ ++ M A+ C+++ RP++
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 425 GQVLKLLRGAT 435
+V +LL+ T
Sbjct: 295 KKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 16/251 (6%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEES 244
EELKQ F E+ + + + +++ L G + + L LV ++P GSL +
Sbjct: 71 EELKQ----------QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 245 LHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDF 304
L L W +R ++A A +N+LH IHRD+KS+NILL F ++SDF
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 177
Query: 305 GLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGF 364
GLA + ++ +VGT Y+APE L G+++ K D+YSFGVVLLE+++G +
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV-- 234
Query: 365 KNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNM 424
+ P+ L+ + I T K N+ D+ ++ M A+ C+++ RP++
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 425 GQVLKLLRGAT 435
+V +LL+ T
Sbjct: 295 KKVQQLLQEMT 305
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 16/251 (6%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEES 244
EELKQ F E+ + + + +++ L G + + L LV + P GSL +
Sbjct: 62 EELKQ----------QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR 111
Query: 245 LHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDF 304
L L W R ++A A +N+LH IHRD+KS+NILL F ++SDF
Sbjct: 112 LSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 168
Query: 305 GLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGF 364
GLA + + +VGT Y APE L G+++ K D+YSFGVVLLE+++G +
Sbjct: 169 GLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAV-- 225
Query: 365 KNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNM 424
+ P+ L+ + I T K N+ D+ ++ A+ C+++ RP++
Sbjct: 226 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDI 285
Query: 425 GQVLKLLRGAT 435
+V +LL+ T
Sbjct: 286 KKVQQLLQEXT 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
N+F EV I L +I G + L +V+++L +GSL LH +G + L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
R +A +A+ +NYLH+ + P++HR++KS N+L+ + ++ DFGL+ ST +
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS--RLKASTFLS 195
Query: 319 REDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAK 378
+ GT ++APE L ++K DVYSFGV+L EL + ++P G N P +V
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN---PAQVVAAVG 252
Query: 379 PILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLR 432
K + L+P+++ + C P RP+ ++ LLR
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEG------------CWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 18/234 (7%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
N+F EV I L +I G + L +V+++L +GSL LH +G + L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
R +A +A+ +NYLH+ + P++HRD+KS N+L+ + ++ DFGL+ S +
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLS--RLKASXFLX 195
Query: 319 REDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAK 378
+ GT ++APE L ++K DVYSFGV+L EL + ++P G N P +V
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN---PAQVVAAVG 252
Query: 379 PILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLR 432
K + L+P+++ + C P RP+ ++ LLR
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEG------------CWTNEPWKRPSFATIMDLLR 294
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+ E + + L+ +I L GVC+++ L LV +F G L L G +P +
Sbjct: 52 NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG----KRIPPDIL 107
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP--------QLSDFGLAIWGP 311
AV IA +NYLH E P+IHRD+KSSNIL+ + +++DFGLA
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA---- 163
Query: 312 TDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKG 369
+ + G + ++APE + S DV+S+GV+L ELL+G P F+ + G
Sbjct: 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP--FRGIDG 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIED--NYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
D E++I +L ++I G+C ED N + L+ +FLP GSL+E L + L
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-TH 316
+++ AV I + ++YL S R +HRD+ + N+L+ S+ Q ++ DFGL TD
Sbjct: 129 LKY--AVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 317 MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++D + APE LM K DV+SFGV L ELL+
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIED--NYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
D E++I +L ++I G+C ED N + L+ +FLP GSL+E L + L
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 116
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-TH 316
+++ AV I + ++YL S R +HRD+ + N+L+ S+ Q ++ DFGL TD
Sbjct: 117 LKY--AVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 317 MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++D + APE LM K DV+SFGV L ELL+
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E+ S + +I L G C+ N + LV ++ GSL LHGA
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILL-SSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + YLHS + +IHRD+K N+LL + ++ DFG A THM
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTN 162
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKP 379
G+ ++APE S+K DV+S+G++L E+++ R+P F + GP + WA
Sbjct: 163 NK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWA-- 216
Query: 380 ILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
+ NG L+ L ++ + C ++ P RP+M +++K++
Sbjct: 217 -VHNGTRPPLIK-NLPKPIESLMTR--------CWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E+ S + +I L G C+ N + LV ++ GSL LHGA
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 106
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILL-SSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + YLHS + +IHRD+K N+LL + ++ DFG A THM
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTN 163
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKP 379
G+ ++APE S+K DV+S+G++L E+++ R+P F + GP + WA
Sbjct: 164 NK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWA-- 217
Query: 380 ILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
+ NG L+ L ++ + C ++ P RP+M +++K++
Sbjct: 218 -VHNGTRPPLIK-NLPKPIESLMTR--------CWSKDPSQRPSMEEIVKIM 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 35/249 (14%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEV 262
E+ + S + +T G ++D L ++ ++L GS + L G +++ + +R
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 126
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I + L+YLHSE IHRD+K++N+LLS + +L+DFG+A G T + R
Sbjct: 127 --EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 179
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIG-FKNLKGPESLVKWAKPIL 381
VGT ++APE + K D++S G+ +EL G P +K + K P L
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 239
Query: 382 KNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK---LLRGA---T 435
+ ++ L E+ A C+N+ P RP ++LK +LR A +
Sbjct: 240 EGNYSKPL------KEFVEA-----------CLNKEPSFRPTAKELLKHKFILRNAKKTS 282
Query: 436 HATDWVDRH 444
+ T+ +DR+
Sbjct: 283 YLTELIDRY 291
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 33/248 (13%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEV 262
E+ + S + +T G ++D L ++ ++L GS + L G +++ + +R
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 111
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I + L+YLHSE IHRD+K++N+LLS + +L+DFG+A G T + R
Sbjct: 112 --EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 164
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILK 382
VGT ++APE + K D++S G+ +EL G P L + L I K
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP--HSELHPMKVLFL----IPK 218
Query: 383 NGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK---LLRGA---TH 436
N P L Y + + C+N+ P RP ++LK +LR A ++
Sbjct: 219 NN------PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLKHKFILRNAKKTSY 268
Query: 437 ATDWVDRH 444
T+ +DR+
Sbjct: 269 LTELIDRY 276
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 33/248 (13%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEV 262
E+ + S + +T G ++D L ++ ++L GS + L G +++ + +R
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 111
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I + L+YLHSE IHRD+K++N+LLS + +L+DFG+A G T + R
Sbjct: 112 --EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 164
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILK 382
VGT ++APE + K D++S G+ +EL G P L + L I K
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP--HSELHPMKVLFL----IPK 218
Query: 383 NGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK---LLRGA---TH 436
N P L Y + + C+N+ P RP ++LK +LR A ++
Sbjct: 219 NN------PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLKHKFILRNAKKTSY 268
Query: 437 ATDWVDRH 444
T+ +DR+
Sbjct: 269 LTELIDRY 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S+E+ I SL+ + +G +D+++ +V + + SL E LH + P R+
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA-RY 146
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ I + + YLH+ VIHRD+K N+ L+ D ++ DFGLA D ++
Sbjct: 147 FMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KK 200
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
D+ GT YIAPE L S ++D++S G +L LL G+ P LK E+ ++ I
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYIR----I 254
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + P+ N +A ++RML A P LRP++ ++L
Sbjct: 255 KKNEYSV----PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S+E+ I SL+ + +G +D+++ +V + + SL E LH + P R+
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA-RY 130
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ I + + YLH+ VIHRD+K N+ L+ D ++ DFGLA D ++
Sbjct: 131 FMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KK 184
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
D+ GT YIAPE L S ++D++S G +L LL G+ P LK E+ ++ I
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYIR----I 238
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + P+ N +A ++RML A P LRP++ ++L
Sbjct: 239 KKNEYSV----PRHINPVASALIRRMLHA-------DPTLRPSVAELL 275
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 138
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 139 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 188
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R+D+ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 189 ---RDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 113
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 114 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R D+ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 164 ---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 118
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R+D+ G
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDDLCG 171
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 118 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R D+ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 168 ---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 113 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 162
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R D+ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 163 ---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 113 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 162
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R D+ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 163 ---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 98/175 (56%), Gaps = 11/175 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F +E ++ +L+ + L+ V ++ + ++++F+ KGSL + L G + LP +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
F + IAE + ++ R IHRD++++NIL+S+ +++DFGLA D+ + R
Sbjct: 289 F--SAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAR 342
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESL 373
E + APE + G + K DV+SFG++L+E+++ GR P + + PE +
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP--YPGMSNPEVI 395
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 98/175 (56%), Gaps = 11/175 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F +E ++ +L+ + L+ V ++ + ++++F+ KGSL + L G + LP +
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
F + IAE + ++ R IHRD++++NIL+S+ +++DFGLA D+ + R
Sbjct: 116 F--SAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAR 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESL 373
E + APE + G + K DV+SFG++L+E+++ GR P + + PE +
Sbjct: 170 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP--YPGMSNPEVI 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P+G + + L EQ
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT 117
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 118 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 168 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEV 262
E+ + S + +T G ++D L ++ ++L GS + L G +++ + +R
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 131
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I + L+YLHSE IHRD+K++N+LLS + +L+DFG+A G T + R
Sbjct: 132 --EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 184
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILK 382
VGT ++APE + K D++S G+ +EL G P + L+ P
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 241
Query: 383 NGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK---LLRGA---TH 436
P L Y + + C+N+ P RP ++LK +LR A ++
Sbjct: 242 ---------PTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLKHKFILRNAKKTSY 288
Query: 437 ATDWVD 442
T+ +D
Sbjct: 289 LTELID 294
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P+G + + L EQ
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT 117
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 118 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 168 ---RXXLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQF--SYEELKQATSQFSSAWNDFSSEV 205
F++ P +GK+ + L + R+F + + L +A + + + EV
Sbjct: 7 FEIGRPLGKGKFGN----------VYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREV 56
Query: 206 DITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEV 262
+I S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 57 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R +
Sbjct: 111 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTL 163
Query: 323 VGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 164 CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S+E+ I SL+ + +G +D+++ +V + + SL E LH + P R+
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA-RY 146
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ I + + YLH+ VIHRD+K N+ L+ D ++ DFGLA D ++
Sbjct: 147 FMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KK 200
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++D++S G +L LL G+ P LK E+ ++ I
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYIR----I 254
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + P+ N +A ++RML A P LRP++ ++L
Sbjct: 255 KKNEYSV----PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 36/240 (15%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
D+ E++I ++ + I L G D L ++ +F P G+++ + G E +
Sbjct: 62 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
V + EALN+LHS + +IHRD+K+ N+L++ + +L+DFG++ T
Sbjct: 122 ------VCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKT 170
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRPIGFKNLKGP 370
R+ +GT ++APE +M + D K D++S G+ L+E+ P L
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP--HHELNPM 228
Query: 371 ESLVKWAKPILKNGDTETLLDP-KLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK 429
L+K AK D TLL P K S E+ + + ++++P+ RP+ Q+L+
Sbjct: 229 RVLLKIAK-----SDPPTLLTPSKWSVEFRD--------FLKIALDKNPETRPSAAQLLE 275
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 190 ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESL-- 245
A Q S W E+DI +L + I G C + L LV +++P GSL + L
Sbjct: 72 AGPQHRSGWK---QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR 128
Query: 246 HGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG 305
H G +L + A I E + YLH++ IHRD+ + N+LL +D ++ DFG
Sbjct: 129 HSIGLAQLLLF------AQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179
Query: 306 LAIWGP-TDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
LA P + +RED + APE L K DV+SFGV L ELL+
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S+E+ I SL+ + +G +D+++ +V + + SL E LH + P R+
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA-RY 146
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ I + + YLH+ VIHRD+K N+ L+ D ++ DFGLA D ++
Sbjct: 147 FMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KK 200
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++D++S G +L LL G+ P LK E+ ++ I
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK--ETYIR----I 254
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + P+ N +A ++RML A P LRP++ ++L
Sbjct: 255 KKNEYSV----PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 36/240 (15%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
D+ E++I ++ + I L G D L ++ +F P G+++ + G E +
Sbjct: 54 DYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
V + EALN+LHS + +IHRD+K+ N+L++ + +L+DFG++ T
Sbjct: 114 ------VCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKT 162
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRPIGFKNLKGP 370
R+ +GT ++APE +M + D K D++S G+ L+E+ P L
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP--HHELNPM 220
Query: 371 ESLVKWAKPILKNGDTETLLDP-KLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK 429
L+K AK D TLL P K S E+ + + ++++P+ RP+ Q+L+
Sbjct: 221 RVLLKIAK-----SDPPTLLTPSKWSVEFRD--------FLKIALDKNPETRPSAAQLLE 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 113 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 162
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R ++ GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 163 ---RTELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F EV + LE ++ GV +D L +++++ G+L + Q PW R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRV 111
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH---- 316
A IA + YLHS +IHRD+ S N L+ + ++DFGLA + T
Sbjct: 112 SFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 317 --------MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
R VVG ++APE + +K+DV+SFG+VL E++
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 193 QFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLPKGSLEESL--HGA 248
Q S W E+DI +L + I G C + + L LV +++P GSL + L H
Sbjct: 58 QHRSGWK---QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI 114
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAI 308
G +L + A I E + YLHS+ IHR++ + N+LL +D ++ DFGLA
Sbjct: 115 GLAQLLLF------AQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 309 WGPTDSTHM-IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
P + +RED + APE L K DV+SFGV L ELL+
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ +FLP GSL E L E+ +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHI 117
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 118 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 19/234 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSV 253
+ A D E+D+ L ++ IEDN L +V + G L + H ++ +
Sbjct: 73 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL 132
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
+P ++ V + AL ++HS R V+HRD+K +N+ +++ +L D GL + +
Sbjct: 133 IPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189
Query: 314 STHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+T +VGT Y++PE + + K D++S G +L E+ + + P + +L
Sbjct: 190 TT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NL 243
Query: 374 VKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQV 427
K I E P L +++ + ++++++ N+CIN P+ RP++ V
Sbjct: 244 YSLCKKI------EQCDYPPLPSDHYSEELRQLV---NMCINPDPEKRPDVTYV 288
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 113
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 114 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R+ + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 164 ---RDTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 70 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 129
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 130 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 179
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 180 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 138
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 139 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 188
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 189 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 148 FQMDIPCSEGKYDENTLT--PSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEV 205
F++ P +GK+ L +++ L L + L +A + + + EV
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILAL----------KVLFKAQLEKAGVEHQLRREV 59
Query: 206 DITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEV 262
+I S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R +
Sbjct: 114 ITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAAL 166
Query: 323 VGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 167 CGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 116 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 165
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 166 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 114
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 115 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 164
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 165 ---RXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + S + +T G ++ + L ++ ++L GS + L P+ F++A
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFD-EFQIA 123
Query: 264 VAIAE---ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ E L+YLHSE IHRD+K++N+LLS +L+DFG+A G T + R
Sbjct: 124 TMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRN 178
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
VGT ++APE + K D++S G+ +EL G P N V + P
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP----NSDMHPMRVLFLIP- 233
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK 429
KN P L ++ + + + + C+N+ P RP ++LK
Sbjct: 234 -KNN------PPTLVGDFTKSFKEFI----DACLNKDPSFRPTAKELLK 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 118 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 168 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 193 QFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLPKGSLEESL--HGA 248
Q S W E+DI +L + I G C + + L LV +++P GSL + L H
Sbjct: 58 QHRSGWK---QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI 114
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAI 308
G +L + A I E + YLH++ IHR++ + N+LL +D ++ DFGLA
Sbjct: 115 GLAQLLLF------AQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 309 WGPTDSTHM-IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
P + +RED + APE L K DV+SFGV L ELL+
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 113 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 162
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 163 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 118
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R + G
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCG 171
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT 116
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S+ + +++DFG ++ P+
Sbjct: 117 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR- 166
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R+ + GT Y+ PE ++ G++ D K+D++S GV+ E L G P
Sbjct: 167 ---RDTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 116 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 165
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 166 ---RXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEV 262
E+ + S + IT G ++ L ++ ++L GS + L G E++ + +R
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR--- 123
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I + L+YLHSE IHRD+K++N+LLS +L+DFG+A G T + R
Sbjct: 124 --EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXF 176
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILK 382
VGT ++APE + K D++S G+ +EL G P
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP--------------------- 215
Query: 383 NGDTETL----LDPKLSNEYDNAQMQRMLLA-ANLCINQSPQLRPNMGQVLK------LL 431
N D + L PK S Q + C+N+ P+ RP ++LK
Sbjct: 216 NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 275
Query: 432 RGATHATDWVDRH 444
+ + T+ +DR+
Sbjct: 276 KKTSFLTELIDRY 288
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 116 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 165
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 166 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G +DN L +V+ + SL + LH +++
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHV--QETKFQMFQLI 135
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L ++ DFGLA S E
Sbjct: 136 DIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 321 DVVGTFGYIAPEYLM---HGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
G+ ++APE + + S + DVYS+G+VL EL++G P N +
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------- 244
Query: 378 KPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHA 437
+ I G P LS Y N L A+ C+ + + RP Q+L + H+
Sbjct: 245 QIIFMVG--RGYASPDLSKLYKNCPKAMKRLVAD-CVKKVKEERPLFPQILSSIELLQHS 301
Query: 438 TDWVDR 443
++R
Sbjct: 302 LPKINR 307
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHI 117
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 118 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 115
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R + G
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCG 168
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 187 LKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH 246
LKQ T + + + E I L+ I L GVC + L+LV + G L + L
Sbjct: 45 LKQGTEKADT--EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 101
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
G E+ +P E+ ++ + YL + +HRD+ + N+LL + ++SDFGL
Sbjct: 102 GKREE--IPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGL 156
Query: 307 A-IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGF 364
+ G DS + R + APE + K S + DV+S+GV + E LS G++P +
Sbjct: 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP--Y 214
Query: 365 KNLKGPESL 373
K +KGPE +
Sbjct: 215 KKMKGPEVM 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 52 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 111
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 112 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 161
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 162 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 119
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R + G
Sbjct: 120 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCG 172
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 173 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 115
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R + G
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAALCG 168
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 148 FQMDIPCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDI 207
F++ P +GK+ L + L + + L +A + + + EV+I
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFIL--------ALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 208 TSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLPWGVRFEVAV 264
S L +I L G + + L+ ++ P G++ L EQ +
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------IT 115
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
+A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+ R + G
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTXLCG 168
Query: 325 TFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
T Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT 116
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S+ + +++DFG ++ P+
Sbjct: 117 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR- 166
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G P
Sbjct: 167 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 114
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + ++++FG ++ P+
Sbjct: 115 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR- 164
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 165 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG ++ P+
Sbjct: 118 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE + +K+D++S GV+ E L G+ P
Sbjct: 168 ---RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 114
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 115 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF 171
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIED-NYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
F +E + + L ++ L GV +E+ L +V++++ KGSL + L G +SVL
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCL 291
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + EA+ YL +HRD+ + N+L+S D ++SDFGL T +
Sbjct: 292 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQ 343
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE L K S K DV+SFG++L E+ S GR P
Sbjct: 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV-- 253
+A DF E ++ ++L+ + I GVC+E + LI+V +++ G L + L G +V
Sbjct: 57 NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLM 116
Query: 254 --------LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG 305
L +A IA + YL S+ +HRD+ + N L+ + ++ DFG
Sbjct: 117 AEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFG 173
Query: 306 LAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
++ + + + + ++ PE +M+ K + + DV+S GVVL E+ + G++P
Sbjct: 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 117
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 118 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 119
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 120 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 176
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 61 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 118
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 119 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 175
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIED-NYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
F +E + + L ++ L GV +E+ L +V++++ KGSL + L G +SVL
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCL 119
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + EA+ YL +HRD+ + N+L+S D ++SDFGL T +
Sbjct: 120 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQ 171
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE L K S K DV+SFG++L E+ S GR P
Sbjct: 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 114
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 115 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 56 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 113
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 114 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 170
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 63 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 120
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 121 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 177
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 121
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 122 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 88 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 145
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 146 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 202
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 193 QFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLPKGSLEESL--HGA 248
Q S W E++I +L + I G C + + + LV +++P GSL + L H
Sbjct: 52 QLRSGWQ---REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV 108
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAI 308
G +L + A I E + YLH++ IHR + + N+LL +D ++ DFGLA
Sbjct: 109 GLAQLLLF------AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
Query: 309 WGPTDSTHM-IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
P + +RED + APE L K DV+SFGV L ELL+
Sbjct: 160 AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 55 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 112
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 113 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 169
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 193 QFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLPKGSLEESL--HGA 248
Q S W E++I +L + I G C + + + LV +++P GSL + L H
Sbjct: 53 QLRSGWQ---REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV 109
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAI 308
G +L + A I E + YLH++ IHR + + N+LL +D ++ DFGLA
Sbjct: 110 GLAQLLLF------AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
Query: 309 WGPTDSTHM-IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
P + +RED + APE L K DV+SFGV L ELL+
Sbjct: 161 AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 114
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 115 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIED-NYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
F +E + + L ++ L GV +E+ L +V++++ KGSL + L G +SVL
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCL 104
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + EA+ YL +HRD+ + N+L+S D ++SDFGL T +
Sbjct: 105 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQ 156
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE L K S K DV+SFG++L E+ S GR P
Sbjct: 157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + ++++FG ++ P+
Sbjct: 116 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR- 165
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 166 ---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 58 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 115
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHR++ + NIL+ ++ + ++ DFGL P D +
Sbjct: 116 KLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 132
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 133 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 189
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 187 LKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH 246
LKQ T + + + E I L+ I L GVC + L+LV + G L + L
Sbjct: 371 LKQGTEKADT--EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 427
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
G E+ +P E+ ++ + YL + +HR++ + N+LL + ++SDFGL
Sbjct: 428 GKREE--IPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGL 482
Query: 307 A-IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGF 364
+ G DS + R + APE + K S + DV+S+GV + E LS G++P +
Sbjct: 483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP--Y 540
Query: 365 KNLKGPESLV 374
K +KGPE +
Sbjct: 541 KKMKGPEVMA 550
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 21/175 (12%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F +E ++ +L+ + L+ V ++ + ++++F+ KGSL + L G + LP +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
F + IAE + ++ R IHRD++++NIL+S+ +++DFGLA R
Sbjct: 283 F--SAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLA-----------R 326
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESL 373
+ APE + G + K DV+SFG++L+E+++ GR P + + PE +
Sbjct: 327 VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP--YPGMSNPEVI 379
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG---EQSVLP 255
+ EV+I S L +I L G + + L+ ++ P G++ L EQ
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 113
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A AL+Y HS + VIHRD+K N+LL S + +++DFG + P+
Sbjct: 114 Y------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR- 163
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
R + GT Y+ PE ++ G++ D K+D++S GV+ E L G+ P
Sbjct: 164 ---RTTLSGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWG 257
DF E++I SL+ +I GVC L L+ ++LP GSL + L E+ +
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 132
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
+ I + + YL ++ IHRD+ + NIL+ ++ + ++ DFGL P D
Sbjct: 133 KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 189
Query: 318 -IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++E + APE L K S DV+SFGVVL EL +
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E ++ +L+ + L V + + ++++++ KGSL + L G + +LP +
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID 114
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
F + IAE + Y+ + IHRD++++N+L+S +++DFGLA D+ + R
Sbjct: 115 F--SAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAR 168
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
E + APE + G + K DV+SFG++L E+++ G+ P
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 14/153 (9%)
Query: 209 SSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GA-GEQSVLPWGVRFEVAV 264
SL+ I L G+C + L LV+ +LP GSL + + GA G Q +L WGV+
Sbjct: 88 GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ----- 141
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
IA+ + YL ++HR++ + N+LL S Q Q++DFG+A P D ++ +
Sbjct: 142 -IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 325 TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++A E + GK + + DV+S+GV + EL++
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLP 255
++ ++ E+ S +I + + + L LV L GS+ + + +
Sbjct: 55 TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 114
Query: 256 WGVRFEVAVA-----IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIW- 309
GV E +A + E L YLH IHRDVK+ NILL D Q++DFG++ +
Sbjct: 115 SGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 171
Query: 310 --GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI-GFK 365
G + + +R+ VGT ++APE + + D K D++SFG+ +EL +G P +
Sbjct: 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231
Query: 366 NLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMG 425
+K ++ P L+ G + D ++ +Y + ++M+ +LC+ + P+ RP
Sbjct: 232 PMKVLMLTLQNDPPSLETG----VQDKEMLKKYGKS-FRKMI---SLCLQKDPEKRPTAA 283
Query: 426 QVLK 429
++L+
Sbjct: 284 ELLR 287
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 14/153 (9%)
Query: 209 SSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GA-GEQSVLPWGVRFEVAV 264
SL+ I L G+C + L LV+ +LP GSL + + GA G Q +L WGV+
Sbjct: 70 GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ----- 123
Query: 265 AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVG 324
IA+ + YL ++HR++ + N+LL S Q Q++DFG+A P D ++ +
Sbjct: 124 -IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 325 TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++A E + GK + + DV+S+GV + EL++
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E ++ +L+ + L V ++ + ++++F+ KGSL + L G + +LP +
Sbjct: 54 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
F + IAE + Y+ + IHRD++++N+L+S +++DFGLA D+ + R
Sbjct: 114 F--SAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAR 167
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
E + APE + G + K +V+SFG++L E+++ G+ P
Sbjct: 168 EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+ E++I S L +I + + + L+ +F P+G L + L G
Sbjct: 60 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--------- 110
Query: 259 RFE------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
RF+ +A+AL+Y H R VIHRD+K N+L+ + +++DFG ++ P+
Sbjct: 111 RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 167
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
+ R + GT Y+ PE ++ GK D K+D++ GV+ E L G P
Sbjct: 168 ----LRRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+ E++I S L +I + + + L+ +F P+G L + L G
Sbjct: 59 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--------- 109
Query: 259 RFE------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
RF+ +A+AL+Y H R VIHRD+K N+L+ + +++DFG ++ P+
Sbjct: 110 RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
+ R + GT Y+ PE ++ GK D K+D++ GV+ E L G P
Sbjct: 167 ----LRRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+ E++I S L +I + + + L+ +F P+G L + L G
Sbjct: 59 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--------- 109
Query: 259 RFE------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
RF+ +A+AL+Y H R VIHRD+K N+L+ + +++DFG ++ P+
Sbjct: 110 RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI 362
+ R + GT Y+ PE ++ GK D K+D++ GV+ E L G P
Sbjct: 167 ----LRRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLP 255
++ ++ E+ S +I + + + L LV L GS+ + + +
Sbjct: 50 TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 109
Query: 256 WGVRFEVAVA-----IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIW- 309
GV E +A + E L YLH IHRDVK+ NILL D Q++DFG++ +
Sbjct: 110 SGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 166
Query: 310 --GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPI-GFK 365
G + + +R+ VGT ++APE + + D K D++SFG+ +EL +G P +
Sbjct: 167 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 226
Query: 366 NLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMG 425
+K ++ P L+ G + D ++ +Y + ++M+ +LC+ + P+ RP
Sbjct: 227 PMKVLMLTLQNDPPSLETG----VQDKEMLKKYGKS-FRKMI---SLCLQKDPEKRPTAA 278
Query: 426 QVLK 429
++L+
Sbjct: 279 ELLR 282
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
+ ++ + +F EV I S+L +I L G+ N +V +F+P G L L
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL--L 113
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS-----DFQPQLSD 303
+ + W V+ + + IA + Y+ ++ + P++HRD++S NI L S +++D
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVS--DKIDVYSFGVVLLELLSGRRP 361
FGL+ S H + ++G F ++APE + + S +K D YSF ++L +L+G
Sbjct: 173 FGLS----QQSVHSV-SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--- 224
Query: 362 IGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLR 421
+GP + K N E L P + + R+ LC + P+ R
Sbjct: 225 ------EGPFDEYSYGKIKFINMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 422 PNMGQVLKLL 431
P+ ++K L
Sbjct: 275 PHFSYIVKEL 284
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH + ++
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS--ETKFEMKKLI 111
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 112 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 321 DVVGTFGYIAPEYLMH---GKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + S + DVY+FG+VL EL++G+ P + N+ + +++
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE-- 224
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
++ G L P LS N +M+R++ C+ + RP+ ++L
Sbjct: 225 --MVGRGS----LSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRIL 268
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 54 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 107
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 108 GSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 162
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ G
Sbjct: 163 IKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
Query: 359 RRPIG 363
R PIG
Sbjct: 219 RYPIG 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH + ++
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS--ETKFEMKKLI 123
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 124 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 321 DVVGTFGYIAPEYLMH---GKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + S + DVY+FG+VL EL++G+ P + N+ + +++
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE-- 236
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
++ G L P LS N +M+R++ C+ + RP+ ++L
Sbjct: 237 --MVGRGS----LSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRIL 280
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV- 283
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 284 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 338
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV- 283
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 284 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 338
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV- 366
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 367 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 421
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIED-NYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
F +E + + L ++ L GV +E+ L +V++++ KGSL + L G +SVL
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCL 110
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ ++ + EA+ YL +HRD+ + N+L+S D ++SDFGL T +
Sbjct: 111 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQ 162
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE L S K DV+SFG++L E+ S GR P
Sbjct: 163 DTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G L +V+ + SL LH + ++
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHAS--ETKFEMKKLI 123
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 124 DIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 321 DVVGTFGYIAPEYLMH---GKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + S + DVY+FG+VL EL++G+ P + N+ + +++
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIE-- 236
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
++ G L P LS N +M+R++ C+ + RP+ ++L
Sbjct: 237 --MVGRGS----LSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRIL 280
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V +++ KGSL + L G G+ LP V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLV- 283
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 284 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 338
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 27/147 (18%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLH-------SECSRPV 281
L L++ F KGSL + L G +++ W VA ++ L+YLH E +P
Sbjct: 88 LWLITAFHDKGSLTDYLKG----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 282 I-HRDVKSSNILLSSDFQPQLSDFGLAI----WGPTDSTHMIREDVVGTFGYIAPEYLMH 336
I HRD KS N+LL SD L+DFGLA+ P TH VGT Y+APE L
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH----GQVGTRRYMAPEVL-E 198
Query: 337 GKVSD------KIDVYSFGVVLLELLS 357
G ++ +ID+Y+ G+VL EL+S
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 97 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 150
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 151 GSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 205
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ G
Sbjct: 206 IKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
Query: 359 RRPI 362
R PI
Sbjct: 262 RYPI 265
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLV- 110
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 111 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 165
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 166 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 108
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 109 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 163
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 106
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 107 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 161
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 162 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 35/258 (13%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV-- 253
+A DF E ++ ++L+ + I GVC + + LI+V +++ G L + L G ++
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 254 -----------LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
L +A IA + YL S+ +HRD+ + N L+ ++ ++
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIG 175
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
DFG++ + + + + ++ PE +M+ K + + DV+SFGV+L E+ + G++P
Sbjct: 176 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 362 -IGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQL 420
N + E + + L P++ + ++ ++L C + PQ
Sbjct: 236 WFQLSNTEVIECITQ----------GRVLERPRVCPK----EVYDVMLG---CWQREPQQ 278
Query: 421 RPNMGQVLKLLRGATHAT 438
R N+ ++ K+L AT
Sbjct: 279 RLNIKEIYKILHALGKAT 296
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 36/253 (14%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 38 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 91
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 92 GSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 146
Query: 299 PQLSDFGLAIWGPTDSTHMIRE---DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+L DFG+ S +I E + VGT Y++PE L S + D++S G+ L+E+
Sbjct: 147 IKLCDFGV-------SGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 356 LSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCIN 415
GR P + P ++ + I+ PKL + + + Q + N C+
Sbjct: 200 AVGRYP------RPPMAIFELLDYIVNEP------PPKLPSAVFSLEFQDFV---NKCLI 244
Query: 416 QSPQLRPNMGQVL 428
++P R ++ Q++
Sbjct: 245 KNPAERADLKQLM 257
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 114
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 115 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLV 374
+++E F + APE L S D + FGV L E+ + G+ P + L G + L
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH 229
Query: 375 K 375
K
Sbjct: 230 K 230
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 100/191 (52%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 53 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK-- 109
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 110 -----TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 161
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ + RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 162 DFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 219
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 220 PYPGMTNPEVI 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 62 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 116 GSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 170
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ G
Sbjct: 171 IKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Query: 359 RRPI 362
R PI
Sbjct: 227 RYPI 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPW 256
DF E+ I +L I GV L LV ++LP G L + L ++ L
Sbjct: 56 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDA 113
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-T 315
+ I + + YL S R +HRD+ + NIL+ S+ +++DFGLA P D
Sbjct: 114 SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++RE + APE L S + DV+SFGVVL EL +
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPW 256
DF E+ I +L I GV L LV ++LP G L + L ++ L
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDA 114
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-T 315
+ I + + YL S R +HRD+ + NIL+ S+ +++DFGLA P D
Sbjct: 115 SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++RE + APE L S + DV+SFGVVL EL +
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPW 256
DF E+ I +L I GV L LV ++LP G L + L ++ L
Sbjct: 69 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDA 126
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-T 315
+ I + + YL S R +HRD+ + NIL+ S+ +++DFGLA P D
Sbjct: 127 SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++RE + APE L S + DV+SFGVVL EL +
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 120
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 121 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++E F + APE L S D + FGV L E+ + G+ P
Sbjct: 178 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V +++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 120
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 121 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++E F + APE L S D + FGV L E+ + G+ P
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 110
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 111 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++E F + APE L S D + FGV L E+ + G+ P
Sbjct: 168 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 110
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 111 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++E F + APE L S D + FGV L E+ + G+ P
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
+ ++ + +F EV I S+L +I L G+ N +V +F+P G L L
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL--L 113
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS-----DFQPQLSD 303
+ + W V+ + + IA + Y+ ++ + P++HRD++S NI L S +++D
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVS--DKIDVYSFGVVLLELLSGRRP 361
FG + S H + ++G F ++APE + + S +K D YSF ++L +L+G
Sbjct: 173 FGTS----QQSVHSV-SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--- 224
Query: 362 IGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLR 421
+GP + K N E L P + + R+ LC + P+ R
Sbjct: 225 ------EGPFDEYSYGKIKFINMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 422 PNMGQVLKLL 431
P+ ++K L
Sbjct: 275 PHFSYIVKEL 284
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 114
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 115 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLV 374
+++E F + APE L S D + FGV L E+ + G+ P + L G + L
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH 229
Query: 375 K 375
K
Sbjct: 230 K 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 284
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGL D+ + R
Sbjct: 285 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRL-IEDNEYTAR 339
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 197 AWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPW 256
A +DF EV+ SL+ +++ L GV + + +V++ P GSL + L +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLL-- 110
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
G AV +AE + YL S + IHRD+ + N+LL++ ++ DFGL P + H
Sbjct: 111 GTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 317 -MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLV 374
+++E F + APE L S D + FGV L E+ + G+ P + L G + L
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH 225
Query: 375 K 375
K
Sbjct: 226 K 226
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKG 239
R+ + E+K A N E+ + I G D + + + + G
Sbjct: 36 RKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
SL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 90 SLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI 144
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 360 RPI 362
PI
Sbjct: 201 YPI 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 35 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 89 GSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGE 143
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ G
Sbjct: 144 IKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 359 RRPI 362
R PI
Sbjct: 200 RYPI 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +E ++ L+ + + L V ++ + ++++++ GSL + L P G++
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT-------PSGIKL 112
Query: 261 ------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
++A IAE + ++ R IHRD++++NIL+S +++DFGLA D+
Sbjct: 113 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDN 168
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ RE + APE + +G + K DV+SFG++L E+++ R I + + PE +
Sbjct: 169 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVI 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKG 239
R+ + E+K A N E+ + I G D + + + + G
Sbjct: 36 RKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
SL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 90 SLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI 144
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 360 RPI 362
PI
Sbjct: 201 YPI 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +E ++ L+ + + L V ++ + ++++++ GSL + L P G++
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT-------PSGIKL 111
Query: 261 ------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
++A IAE + ++ R IHRD++++NIL+S +++DFGLA D+
Sbjct: 112 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDN 167
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ RE + APE + +G + K DV+SFG++L E+++ R I + + PE +
Sbjct: 168 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVI 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE 242
+ + LK+A+ SA DF E ++ + L+ + I GVC E L++V +++ G L
Sbjct: 75 AVKALKEASE---SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 243 ESL--HG------AGEQSVLP----WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L HG AG + V P G VA +A + YL +HRD+ + N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 188
Query: 291 ILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGV 350
L+ ++ DFG++ + + + + ++ PE +++ K + + DV+SFGV
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248
Query: 351 VLLELLS-GRRP 361
VL E+ + G++P
Sbjct: 249 VLWEIFTYGKQP 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE 242
+ + LK+A+ SA DF E ++ + L+ + I GVC E L++V +++ G L
Sbjct: 46 AVKALKEASE---SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 243 ESL--HG------AGEQSVLP----WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L HG AG + V P G VA +A + YL +HRD+ + N
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 159
Query: 291 ILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGV 350
L+ ++ DFG++ + + + + ++ PE +++ K + + DV+SFGV
Sbjct: 160 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 219
Query: 351 VLLELLS-GRRP 361
VL E+ + G++P
Sbjct: 220 VLWEIFTYGKQP 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 134
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 135 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 249
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 250 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 291
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 101/192 (52%), Gaps = 21/192 (10%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 38 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 95
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 96 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 146
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
DFGLA D+ + RE + APE + +G + K DV+SFG++L E+++ GR P
Sbjct: 147 DFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
Query: 362 IGFKNLKGPESL 373
+ + PE +
Sbjct: 206 --YPGMTNPEVI 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + + + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKG 239
R+ + E+K A N E+ + I G D + + + + G
Sbjct: 36 RKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
SL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 90 SLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI 144
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 360 RPI 362
PI
Sbjct: 201 YPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKG 239
R+ + E+K A N E+ + I G D + + + + G
Sbjct: 36 RKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
SL++ L AG +P + +V++A+ + L YL + ++HRDVK SNIL++S +
Sbjct: 90 SLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI 144
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
+L DFG++ + VGT Y++PE L S + D++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 360 RPI 362
PI
Sbjct: 201 YPI 203
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE 242
+ + LK+A+ SA DF E ++ + L+ + I GVC E L++V +++ G L
Sbjct: 52 AVKALKEASE---SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 243 ESL--HG------AGEQSVLP----WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L HG AG + V P G VA +A + YL +HRD+ + N
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 165
Query: 291 ILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGV 350
L+ ++ DFG++ + + + + ++ PE +++ K + + DV+SFGV
Sbjct: 166 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 225
Query: 351 VLLELLS-GRRP 361
VL E+ + G++P
Sbjct: 226 VLWEIFTYGKQP 237
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ I++ +++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 135
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 136 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 250
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 251 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 292
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +E ++ L+ + + L V ++ + ++++++ GSL + L P G++
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT-------PSGIKL 106
Query: 261 ------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
++A IAE + ++ R IHRD++++NIL+S +++DFGLA D+
Sbjct: 107 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDN 162
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ RE + APE + +G + K DV+SFG++L E+++ R I + + PE +
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVI 220
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E ++ L + L GVC+E + LV++F+ G L + L ++ +
Sbjct: 49 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR--TQRGLFAAETL 106
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ + + E + YL C VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 107 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSS 162
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------- 213
Query: 379 PILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 214 -VVEDISTGFRLYKPRLASTHVYQIM-------NHCWRERPEDRPAFSRLLRQL 259
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 135
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 136 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 250
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 251 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 292
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD+ ++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVR 259
F E I L+ + L V E+ + +V++++ KGSL + L G G LP V
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLV- 108
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A +A + Y+ IHRD++S+NIL+ + +++DFGLA D+ R
Sbjct: 109 -DMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTAR 163
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL++ GR P
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 179 CRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK 238
R+ + E+K A N E+ + I G D + + + +
Sbjct: 45 ARKLIHLEIKPAIR------NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 98
Query: 239 GSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
GSL++ L E +P + +V++A+ L YL + ++HRDVK SNIL++S +
Sbjct: 99 GSLDQVLK---EAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGE 153
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
+L DFG++ + VGT Y+APE L S + D++S G+ L+EL G
Sbjct: 154 IKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Query: 359 RRPIGFKNLKGPESLVKWAKPILKNGDTE 387
R PI + K E++ + +P++ + E
Sbjct: 210 RYPIPPPDAKELEAI--FGRPVVDGEEGE 236
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
+ ++ + +F EV I S+L +I L G+ N +V +F+P G L L
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL--L 113
Query: 249 GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS-----DFQPQLSD 303
+ + W V+ + + IA + Y+ ++ + P++HRD++S NI L S +++D
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVS--DKIDVYSFGVVLLELLSGRRP 361
F L+ S H + ++G F ++APE + + S +K D YSF ++L +L+G
Sbjct: 173 FSLS----QQSVHSV-SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--- 224
Query: 362 IGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLR 421
+GP + K N E L P + + R+ LC + P+ R
Sbjct: 225 ------EGPFDEYSYGKIKFINMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 422 PNMGQVLKLL 431
P+ ++K L
Sbjct: 275 PHFSYIVKEL 284
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGV- 258
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 259 ---RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A E +NY +HRD++++NIL+ + +++DFGLA D+
Sbjct: 116 MSAQIASGMAYVERMNY---------VHRDLRAANILVGENLVCKVADFGLARL-IEDNE 165
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ R+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 166 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLV- 107
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ R
Sbjct: 108 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTAR 162
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 163 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KG L + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 127
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 128 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 242
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 243 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 284
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 112
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 113 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 227
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 228 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 269
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 112
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 113 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 227
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 228 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 49 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 106
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 107 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 157
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 158 DFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 215
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 216 PYPGMTNPEVI 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLL 244
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLL 244
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPW 256
DF E+ I +L I GV L LV ++LP G L + L ++ L
Sbjct: 53 RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDA 110
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS-T 315
+ I + + YL S R +HRD+ + NIL+ S+ +++DFGLA P D
Sbjct: 111 SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++RE + APE L S + DV+SFGVVL EL +
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 53 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 109
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 110 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 224
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 225 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 100
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 101 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 152 DFGLARL-IEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 209
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 210 PYPGMTNPEVI 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 315 THMIRED-VVGTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLL 244
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLL 244
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 51 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK-- 107
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 108 -----TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 159
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 160 DFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 217
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 218 PYPGMTNPEVI 228
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 163
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLL 244
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 107
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 108 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 222
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 223 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 264
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G + L +V+ + SL LH ++
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 107
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 108 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 222
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 223 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 68 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 126
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 127 LRQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KK 179
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----I 233
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 234 KKNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 270
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E ++ L + L GVC+E + LV +F+ G L + L ++ +
Sbjct: 51 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETL 108
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ + + E + YL C VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 109 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSS 164
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------- 215
Query: 379 PILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 216 -VVEDISTGFRLYKPRLASTHVYQIM-------NHCWRERPEDRPAFSRLLRQL 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 43 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 100
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 101 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 152 DFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 209
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 210 PYPGMTNPEVI 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 52 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 109
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 110 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 160
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 161 DFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 218
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 219 PYPGMTNPEVI 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 226 DNYLI-----LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRP 280
D+YL+ +V ++L GSL + + ++ + G V +AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGL-AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
VIHRD+KS NILL D +L+DFG A P S R ++VGT ++APE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAY 193
Query: 340 SDKIDVYSFGVVLLELLSGRRP 361
K+D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 54 SSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK 113
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 114 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS----NEF 163
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 164 TFGNKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 223 ERVLRGKYRIPFYXSTDCENLL 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 122
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 123 LRQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KK 175
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----I 229
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 230 KKNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ I++ +++ KGSL + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 45 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 102
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHRD++++NIL+S +++
Sbjct: 103 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 153
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
DFGLA D+ RE + APE + +G + K DV+SFG++L E+++ R I
Sbjct: 154 DFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-I 211
Query: 363 GFKNLKGPESL 373
+ + PE +
Sbjct: 212 PYPGMTNPEVI 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 122
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 123 LRQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KK 175
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----I 229
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 230 KKNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +E ++ L+ + + L V ++ + ++++++ GSL + L P G++
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT-------PSGIKL 107
Query: 261 ------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
++A IAE + ++ R IHRD++++NIL+S +++DFGLA D+
Sbjct: 108 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDN 163
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
RE + APE + +G + K DV+SFG++L E+++ R I + + PE +
Sbjct: 164 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVI 221
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V +++ KG L + L G G+ LP V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV- 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++A IA + Y+ +HRD++++NIL+ + +++DFGLA D+ + R
Sbjct: 118 -DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTAR 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +E ++ L+ + + L V ++ + ++++++ GSL + L P G++
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT-------PSGIKL 106
Query: 261 ------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
++A IAE + ++ R IHRD++++NIL+S +++DFGLA D+
Sbjct: 107 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDN 162
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
RE + APE + +G + K DV+SFG++L E+++ R I + + PE +
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVI 220
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F +EV + +I G L +V+ + SL LH ++
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHII--ETKFEMIKLI 107
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++A A+ ++YLH+ + +IHRD+KS+NI L D ++ DFGLA S E
Sbjct: 108 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 321 DVVGTFGYIAPEYL-MHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWA 377
+ G+ ++APE + M K S + DVY+FG+VL EL++G+ P + N+ + ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMV 222
Query: 378 KPILKNGDTETLLDPKLSNEYDNA--QMQRMLLAANLCINQSPQLRPNMGQVL 428
L P LS N M+R++ C+ + RP Q+L
Sbjct: 223 --------GRGYLSPDLSKVRSNCPKAMKRLMAE---CLKKKRDERPLFPQIL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E ++ L + L GVC+E + LV +F+ G L + L ++ +
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETL 105
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ + + E + YL C VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 106 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSS 161
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------- 212
Query: 379 PILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 213 -VVEDISTGFRLYKPRLASTHVYQIM-------NHCWKERPEDRPAFSRLLRQL 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 101/192 (52%), Gaps = 21/192 (10%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA 248
++ Q S + + F +E ++ L+ + + L V ++ + ++++++ GSL + L
Sbjct: 39 KSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKT- 96
Query: 249 GEQSVLPWGVRF------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS 302
P G++ ++A IAE + ++ R IHR+++++NIL+S +++
Sbjct: 97 ------PSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNLRAANILVSDTLSCKIA 147
Query: 303 DFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
DFGLA D+ + RE + APE + +G + K DV+SFG++L E+++ GR P
Sbjct: 148 DFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
Query: 362 IGFKNLKGPESL 373
+ + PE +
Sbjct: 207 --YPGMTNPEVI 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+DF E ++ L + L GVC+E + LV +F+ G L + L ++ +
Sbjct: 67 DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAET 124
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ + + E + YL C VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 125 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTS 180
Query: 319 REDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWA 377
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 181 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------ 232
Query: 378 KPILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 233 --VVEDISTGFRLYKPRLASTHVYQIM-------NHCWKERPEDRPAFSRLLRQL 278
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E ++ L + L GVC+E + LV +F+ G L + L ++ +
Sbjct: 46 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETL 103
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ + + E + YL C VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 104 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSS 159
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------- 210
Query: 379 PILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 211 -VVEDISTGFRLYKPRLASTHVYQIM-------NHCWKERPEDRPAFSRLLRQL 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH----GAGEQSVLP 255
+F E I +S++ + L GVC+ + LV+ +P G L E +H G Q +L
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
W V IA+ + YL R ++HRD+ + N+L+ S +++DFGLA D
Sbjct: 122 W------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ ++A E + + K + + DV+S+GV + EL++ G +P
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGV 258
DF SE I + ++ L GV + ++++++F+ GSL+ L G+ +V+
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-- 137
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ IA + YL +HRD+ + NIL++S+ ++SDFGL+ + D++
Sbjct: 138 -VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 319 REDVVG---TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+G + APE + + K + DV+S+G+V+ E++S G RP
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 86 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 144
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 145 LRQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KK 197
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----I 251
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 252 KKNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 288
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL---HGAGEQSVLPWGVR 259
+E+ + SL+ +I L V + Y LV++F G L E + H E
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---- 150
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILL---SSDFQPQLSDFGLAIWGPTDSTH 316
+ I + YLH ++HRD+K NILL +S ++ DFGL+ + D +
Sbjct: 151 --IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--Y 203
Query: 317 MIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
+R D +GT YIAPE ++ K ++K DV+S GV++ LL G P G +N
Sbjct: 204 KLR-DRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 63 SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL 121
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 122 RQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKV 174
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----IK 228
Query: 382 KNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 229 KNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 264
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 156 EGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSS-EVDITSSLEQK 214
EG + + L STE RQ+ +E+ S+ SS + S EV + ++++
Sbjct: 34 EGSFGKAILVKSTE--------DGRQYVIKEIN--ISRMSSKEREESRREVAVLANMKHP 83
Query: 215 SITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAG-----EQSVLPWGVRFEVAVAIAEA 269
+I E+ L +V D+ G L + ++ E +L W V+ I A
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ------ICLA 137
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
L ++H R ++HRD+KS NI L+ D QL DFG+A +ST + +GT Y+
Sbjct: 138 LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIA--RVLNSTVELARACIGTPYYL 192
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLEL 355
+PE + ++K D+++ G VL EL
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-AGEQSVLPWGVR 259
F E + L + + L V E+ + +V++++ KGSL + L G G+ LP V
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLV- 114
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+++ IA + Y+ +HRD++++NIL+ + +++DFGLA D+ R
Sbjct: 115 -DMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEWTAR 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ + APE ++G+ + K DV+SFG++L EL + GR P
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
S E+ I SL + + +G +++++ +V + + SL E LH + P +
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 146
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+ + YLH VIHRD+K N+ L+ D + ++ DFGLA D ++
Sbjct: 147 LRQIVLG--CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KK 199
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI 380
+ GT YIAPE L S ++DV+S G ++ LL G+ P LK E+ ++ I
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLR----I 253
Query: 381 LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
KN + PK N + +Q+ML P RP + ++L
Sbjct: 254 KKNEYS----IPKHINPVAASLIQKML-------QTDPTARPTINELL 290
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH----GAGEQSVLP 255
+F E I +S++ + L GVC+ + LV+ +P G L E +H G Q +L
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 144
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
W V IA+ + YL R ++HRD+ + N+L+ S +++DFGLA D
Sbjct: 145 W------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ ++A E + + K + + DV+S+GV + EL++ G +P
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 226 DNYLI-----LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRP 280
D+YL+ +V ++L GSL + + ++ + G V +AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGL-AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
VIHRD+KS NILL D +L+DFG A P S R +VGT ++APE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAY 193
Query: 340 SDKIDVYSFGVVLLELLSGRRP 361
K+D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 226 DNYLI-----LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRP 280
D+YL+ +V ++L GSL + + ++ + G V +AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHS---NQ 136
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGL-AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
VIHRD+KS NILL D +L+DFG A P S R +VGT ++APE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 193
Query: 340 SDKIDVYSFGVVLLELLSGRRP 361
K+D++S G++ +E++ G P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 195 SSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVL 254
SS+ EV I L +I L V + L LV ++ G + + L G
Sbjct: 47 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK 106
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+F I A+ Y H + ++HRD+K+ N+LL +D +++DFG + +
Sbjct: 107 EARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEF 156
Query: 315 THMIREDVV-GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
T + D G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 157 TFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 215
Query: 372 SLV---KWAKPILKNGDTETLL 390
V K+ P + D E LL
Sbjct: 216 ERVLRGKYRIPFYMSTDCENLL 237
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 226 DNYLI-----LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRP 280
D+YL+ +V ++L GSL + + ++ + G V +AL +LHS
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGL-AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
VIHRD+KS NILL D +L+DFG A P S R +VGT ++APE +
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 194
Query: 340 SDKIDVYSFGVVLLELLSGRRP 361
K+D++S G++ +E++ G P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
EV I L +I L V + L L+ ++ G + + L G +F
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-- 121
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA----IWGPTDSTHMIR 319
I A+ Y H + ++HRD+K+ N+LL +D +++DFG + + G D+
Sbjct: 122 -QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA----- 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPESLV--- 374
G Y APE L GK D ++DV+S GV+L L+SG P +NLK V
Sbjct: 173 --FCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 229
Query: 375 KWAKPILKNGDTETLL 390
K+ P + D E LL
Sbjct: 230 KYRIPFYMSTDCENLL 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
EV I L +I L V + L L+ ++ G + + L G +F
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-- 118
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA----IWGPTDSTHMIR 319
I A+ Y H + ++HRD+K+ N+LL +D +++DFG + + G D+
Sbjct: 119 -QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT----- 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLKGPESLV--- 374
G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK V
Sbjct: 170 --FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 226
Query: 375 KWAKPILKNGDTETLL 390
K+ P + D E LL
Sbjct: 227 KYRIPFYMSTDCENLL 242
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL--HGAG-EQSVLP 255
++F E L + GVC ++ + +V++++ G L L HG G E S L
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL- 106
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ + E + +L S IHRD+ + N L+ D ++SDFG+ +
Sbjct: 107 ----LEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGM-------TR 152
Query: 316 HMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKG 369
+++ + V + G + APE + K S K DV++FG+++ E+ S +G K
Sbjct: 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS----LG----KM 204
Query: 370 PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
P L ++ +LK L P L+++ M C ++ P+ RP Q+L
Sbjct: 205 PYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYS-------CWHELPEKRPTFQQLL 256
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 48 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 107
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 108 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 151
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 152 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 45 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 101
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IAE +NYL R ++HRD+ + N+L+ +
Sbjct: 102 DYVREHKDNIGSQYLLNW------CVQIAEGMNYLED---RRLVHRDLAARNVLVKTPQH 152
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 153 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 212
Query: 358 GRRP 361
G +P
Sbjct: 213 GSKP 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 123
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 124 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 167
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 168 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 108
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 109 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 152
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 153 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 55 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 114
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 115 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 158
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 159 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 216 ITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHS 275
I TL +++ LV D + KG L + L E+ L + ++ EA+++LH+
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 276 ECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYL- 334
++HRD+K NILL + Q +LSDFG + + +RE + GT GY+APE L
Sbjct: 219 NN---IVHRDLKPENILLDDNMQIRLSDFGFSCH--LEPGEKLRE-LCGTPGYLAPEILK 272
Query: 335 -----MHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H ++D+++ GV+L LL+G P
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC------SRPVI 282
L L++ F KGSL + L + +V+ W +A +A L YLH + +P I
Sbjct: 97 LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 283 -HRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
HRD+KS N+LL ++ ++DFGLA+ + VGT Y+APE L G ++
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL-EGAINF 211
Query: 342 ------KIDVYSFGVVLLELLS 357
+ID+Y+ G+VL EL S
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS 233
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 44 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 103
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 104 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 147
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 148 RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 184 YEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+E +K++ S F F E DI + + L +D YL +V +++P G L
Sbjct: 111 FEMIKRSDSAF------FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN 164
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
+ W + V +A L+ +HS +IHRDVK N+LL +L+D
Sbjct: 165 LMSNYDVPE--KWAKFYTAEVVLA--LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLAD 217
Query: 304 FGLAIWGPTDSTHMIRED-VVGTFGYIAPEYLMH----GKVSDKIDVYSFGVVLLELLSG 358
FG + D T M+ D VGT YI+PE L G + D +S GV L E+L G
Sbjct: 218 FGTCM--KMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
Query: 359 RRPIGFKNLKGPESLV 374
P +L G S +
Sbjct: 276 DTPFYADSLVGTYSKI 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V A+ +AL YLH++ VIHRD+KS +ILL+ D + +LSDFG D R+
Sbjct: 146 VCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKX 200
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + + ++D++S G++++E++ G P
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L S D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 111
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ + G T + H
Sbjct: 112 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ + + APE L + K S K DV++FGV+L E+
Sbjct: 169 GAKFPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGLA + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 118
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ + G T + H
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ + + APE L + K S K DV++FGV+L E+
Sbjct: 176 GAKFPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 118
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 174
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGVRFE 261
+EV I + +++ + + + L +V +FL G+L + + H + +
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AA 251
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 252 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKX 306
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 58 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 114
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 115 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 165
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 225
Query: 358 GRRP 361
G +P
Sbjct: 226 GSKP 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 118
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 174
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I AL+YLHSE + V++RD+K N++L D +++DFGL G D M + GT
Sbjct: 257 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGT 312
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y+APE L +D + GVV+ E++ GR P
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I AL+YLHSE + V++RD+K N++L D +++DFGL G D M + GT
Sbjct: 260 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGT 315
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y+APE L +D + GVV+ E++ GR P
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 108
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 109 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 152
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 153 RYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 226 DNYLI-----LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRP 280
D+YL+ +V ++L GSL + + ++ + G V +AL +LHS
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHS---NQ 137
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGL-AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
VIHR++KS NILL D +L+DFG A P S R +VGT ++APE +
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAY 194
Query: 340 SDKIDVYSFGVVLLELLSGRRP 361
K+D++S G++ +E++ G P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 51 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 158
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 358 GRRP 361
G +P
Sbjct: 219 GSKP 222
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 115
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 116 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXF 170
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 73 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 129
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 130 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 180
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 240
Query: 358 GRRP 361
G +P
Sbjct: 241 GSKP 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 54 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 110
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 111 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 161
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
Query: 358 GRRP 361
G +P
Sbjct: 222 GSKP 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 118 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 173
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVL 254
++F E + +L + + L GVC + + ++++++ G L E H Q +L
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 123
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
E+ + EA+ YL S + +HRD+ + N L++ ++SDFGL S
Sbjct: 124 ------EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL-------S 167
Query: 315 THMIREDVVGTFG------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+++ ++ + G + PE LM+ K S K D+++FGV++ E+ S G+ P
Sbjct: 168 RYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 115
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 171
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 55 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 162
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 358 GRRP 361
G +P
Sbjct: 223 GSKP 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXF 165
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 55 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 162
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 358 GRRP 361
G +P
Sbjct: 223 GSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 118
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 174
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 50 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 106
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 157
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 358 GRRP 361
G +P
Sbjct: 218 GSKP 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXF 165
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 115
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 171
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 51 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 158
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 358 GRRP 361
G +P
Sbjct: 219 GSKP 222
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 51 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 158
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 358 GRRP 361
G +P
Sbjct: 219 GSKP 222
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 126
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 127 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 182
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 111
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ + G T + H
Sbjct: 112 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ + + APE L + K S K DV++FGV+L E+
Sbjct: 169 GAKFPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 42 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 98
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 99 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 149
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
Query: 358 GRRP 361
G +P
Sbjct: 210 GSKP 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGV 258
DF SE I + ++ L GV + ++++++F+ GSL+ L G+ +V+
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ--- 110
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ IA + YL +HR + + NIL++S+ ++SDFGL+ + D++
Sbjct: 111 LVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
Query: 319 REDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+G + APE + + K + DV+S+G+V+ E++S G RP
Sbjct: 168 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGXLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTF 165
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I AL+YLHSE + V++RD+K N++L D +++DFGL G D M + GT
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGT 173
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y+APE L +D + GVV+ E++ GR P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 186 ELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL---- 241
EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 85 ELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV 141
Query: 242 EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ + ++
Sbjct: 142 REHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKI 192
Query: 302 SDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRR 360
+DFGLA + E ++A E ++H + + DV+S+GV + EL++ G +
Sbjct: 193 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 252
Query: 361 P 361
P
Sbjct: 253 P 253
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 113
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 114 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTF 168
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +++ G L H ++ + RF A I+ ALNYLH R +I+RD+K
Sbjct: 96 LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGIIYRDLKL 149
Query: 289 SNILLSSDFQPQLSDFGLAIWG--PTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+LL S+ +L+D+G+ G P D+T GT YIAPE L +D +
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGTPNYIAPEILRGEDYGFSVDWW 205
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+++GR P
Sbjct: 206 ALGVLMFEMMAGRSPF 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTF 165
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E + + +T L + L V ++ G L H + E+ RF
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-Y 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
I AL YLHS R V++RD+K N++L D +++DFGL G +D M +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXF 165
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT Y+APE L +D + GVV+ E++ GR P
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I AL+YLHSE + V++RD+K N++L D +++DFGL G D M + GT
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGT 172
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y+APE L +D + GVV+ E++ GR P
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I AL+YLHSE + V++RD+K N++L D +++DFGL G D M + GT
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCGT 174
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y+APE L +D + GVV+ E++ GR P
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 184 YEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+E +K++ S F F E DI + + L +D YL +V +++P G L
Sbjct: 105 FEMIKRSDSAF------FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-- 156
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
++ V RF A + AL+ +HS IHRDVK N+LL +L+D
Sbjct: 157 -VNLMSNYDVPEKWARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 211
Query: 304 FGLAIWGPTDSTHMIRED-VVGTFGYIAPEYLM----HGKVSDKIDVYSFGVVLLELLSG 358
FG + + M+R D VGT YI+PE L G + D +S GV L E+L G
Sbjct: 212 FGTCM--KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Query: 359 RRPIGFKNLKGPESLV 374
P +L G S +
Sbjct: 270 DTPFYADSLVGTYSKI 285
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +++ AL+YLH++ VIHRD+KS +ILL+SD + +LSDFG + R+
Sbjct: 146 VCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKX 200
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA--GEQSVLPWGVRF 260
+EV I + +++ + + + L +V +FL G+L + + E+ +
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------ 173
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 174 AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RK 228
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +++ G L H ++ + RF A I+ ALNYLH R +I+RD+K
Sbjct: 128 LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGIIYRDLKL 181
Query: 289 SNILLSSDFQPQLSDFGLAIWG--PTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+LL S+ +L+D+G+ G P D+T GT YIAPE L +D +
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF----CGTPNYIAPEILRGEDYGFSVDWW 237
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+++GR P
Sbjct: 238 ALGVLMFEMMAGRSPF 253
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGVRFE 261
+EV I + +++ + + + L +V +FL G+L + + H + +
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----A 129
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 130 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKX 184
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 207 ITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAI 266
+ S + I + G + + ++ D++ G L L + P V A +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEV 115
Query: 267 AEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTF 326
AL YLHS + +I+RD+K NILL + +++DFG A + P D T+ + GT
Sbjct: 116 CLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-DVTYXL----CGTP 167
Query: 327 GYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
YIAPE + + ID +SFG+++ E+L+G P
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 114
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 115 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAP 170
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGFVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 184 YEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+E +K++ S F F E DI + + L +D YL +V +++P G L
Sbjct: 110 FEMIKRSDSAF------FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-- 161
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
++ V RF A + AL+ +HS IHRDVK N+LL +L+D
Sbjct: 162 -VNLMSNYDVPEKWARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 216
Query: 304 FGLAIWGPTDSTHMIRED-VVGTFGYIAPEYLM----HGKVSDKIDVYSFGVVLLELLSG 358
FG + + M+R D VGT YI+PE L G + D +S GV L E+L G
Sbjct: 217 FGTCM--KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 359 RRPIGFKNLKGPESLV 374
P +L G S +
Sbjct: 275 DTPFYADSLVGTYSKI 290
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 57 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 114
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 115 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGVRFE 261
+EV I + +++ + + + L +V +FL G+L + + H + +
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----A 131
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 132 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKX 186
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 58 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 115
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 116 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 184 YEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+E +K++ S F F E DI + + L +D YL +V +++P G L
Sbjct: 110 FEMIKRSDSAF------FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-- 161
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
++ V RF A + AL+ +HS IHRDVK N+LL +L+D
Sbjct: 162 -VNLMSNYDVPEKWARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 216
Query: 304 FGLAIWGPTDSTHMIRED-VVGTFGYIAPEYLM----HGKVSDKIDVYSFGVVLLELLSG 358
FG + + M+R D VGT YI+PE L G + D +S GV L E+L G
Sbjct: 217 FGTCM--KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 359 RRPIGFKNLKGPESLV 374
P +L G S +
Sbjct: 275 DTPFYADSLVGTYSKI 290
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 135
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 136 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 56 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 113
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 114 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 35 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 91
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV--------- 262
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ F
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEFSFNPSHNPEEQ 146
Query: 263 ---------AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----R 198
Query: 314 STHMIREDVVGTFG-----YIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H I T G ++APE L + + DV+SFGV+L E+ +
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 115
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 116 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAP 171
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 85 TRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 142
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 143 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 52 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 108
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 109 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 159
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 358 GRRP 361
G +P
Sbjct: 220 GSKP 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 49 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 105
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 106 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 156
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 358 GRRP 361
G +P
Sbjct: 217 GSKP 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 55 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 112
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 113 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 50 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 157
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 358 GRRP 361
G +P
Sbjct: 218 GSKP 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGVRFE 261
+EV I + +++ + + + L +V +FL G+L + + H + +
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----A 120
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 121 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKX 175
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 56 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 170
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 171 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 229
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 230 DVWSYGIVLWEVMSYGERP 248
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 81 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 138
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 139 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 135
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 136 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 51 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 107
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 158
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
Query: 358 GRRP 361
G +P
Sbjct: 219 GSKP 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 55 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 111
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 162
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 358 GRRP 361
G +P
Sbjct: 223 GSKP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 173 KLVSSRCRQ-FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLIL 231
K+ S RQ ++ + LK+AT + E DI + I L+ + L L
Sbjct: 45 KISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYL 103
Query: 232 VSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNI 291
+ DFL G L L + E V+F +A +A AL++LHS +I+RD+K NI
Sbjct: 104 ILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENI 157
Query: 292 LLSSDFQPQLSDFGLAIWGPTDSTHMIRE--DVVGTFGYIAPEYLMHGKVSDKIDVYSFG 349
LL + +L+DFGL+ +S ++ GT Y+APE + + D +SFG
Sbjct: 158 LLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 350 VVLLELLSGRRPIGFKNLKGPESLVKWAK 378
V++ E+L+G P K+ K +++ AK
Sbjct: 214 VLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++ +F+ G+L + L Q V V
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVL 111
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ + G T + H
Sbjct: 112 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ + + APE L + K S K DV++FGV+L E+
Sbjct: 169 GAKFPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++ +F+ G+L + L Q V V
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVL 114
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ + G T + H
Sbjct: 115 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ + + APE L + K S K DV++FGV+L E+
Sbjct: 172 GAKFPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 135
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 136 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-HGAGEQSVLPWGVRFE 261
+EV I + +++ + + + L +V +FL G+L + + H + +
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----A 124
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
V +A+ +AL+ LH++ VIHRD+KS +ILL+ D + +LSDFG + R+
Sbjct: 125 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKX 179
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+VGT ++APE + ++D++S G++++E++ G P
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
D+ E+DI +S + +I L +N L ++ +F G+++ ++ E+ + ++
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELERPLTESQIQ 138
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
V +ALNYLH +IHRD+K+ NIL + D +L+DFG++ T R
Sbjct: 139 V-VCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRR 192
Query: 320 EDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRP 361
+ +GT ++APE +M D K DV+S G+ L+E+ P
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++ +F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 81 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 138
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 139 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 194
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 77 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 134
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 135 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 46 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 105
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYLSD---MGYVHRD 160
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 161 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 219
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 220 DVWSYGIVLWEVMSYGERP 238
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 49 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLL 105
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 106 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 156
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFGLA + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
Query: 358 GRRP 361
G +P
Sbjct: 217 GSKP 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +++ G L H ++ + RF A I+ ALNYLH R +I+RD+K
Sbjct: 81 LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGIIYRDLKL 134
Query: 289 SNILLSSDFQPQLSDFGLAIWG--PTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+LL S+ +L+D+G+ G P D+T GT YIAPE L +D +
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGTPNYIAPEILRGEDYGFSVDWW 190
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+++GR P
Sbjct: 191 ALGVLMFEMMAGRSPF 206
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++ +F+ G+L + L Q V V
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVL 118
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 119 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 174
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 135
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 136 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++ +F+ G+L + L Q V V
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVL 113
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ D T+
Sbjct: 114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 29 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++++ GSL+ L Q + V + IA + YL +HRD
Sbjct: 89 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYLSD---MGYVHRD 143
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 202
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 203 DVWSYGIVLWEVMSYGERP 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVL 320
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHR++ + N L+ + +++DFGL+ D T+
Sbjct: 321 LYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 376
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E ++ L + L GVC+E + LV +F+ G L + L ++ +
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETL 105
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ + + E + YL VIHRD+ + N L+ + ++SDFG+ + D +
Sbjct: 106 LGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSS 161
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
+ +PE + S K DV+SFGV++ E+ S G+ P ++N E
Sbjct: 162 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP--YENRSNSE------- 212
Query: 379 PILKNGDTE-TLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
++++ T L P+L++ + M N C + P+ RP ++L+ L
Sbjct: 213 -VVEDISTGFRLYKPRLASTHVYQIM-------NHCWKERPEDRPAFSRLLRQL 258
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 83 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 140
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 141 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 196
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 62 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 119
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 120 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +++ G L H ++ + RF A I+ ALNYLH R +I+RD+K
Sbjct: 85 LFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGIIYRDLKL 138
Query: 289 SNILLSSDFQPQLSDFGLAIWG--PTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+LL S+ +L+D+G+ G P D+T GT YIAPE L +D +
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF----CGTPNYIAPEILRGEDYGFSVDWW 194
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+++GR P
Sbjct: 195 ALGVLMFEMMAGRSPF 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA-GEQSVLPWGV 258
DF E I +I L GV + ++++++++ G+L++ L GE SVL
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-- 149
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ IA + YL + +HRD+ + NIL++S+ ++SDFGL + ++
Sbjct: 150 -VGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGL--------SRVL 197
Query: 319 REDVVGTFG---------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+D T+ + APE + + K + DV+SFG+V+ E+++ G RP
Sbjct: 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 137
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 138 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E D+ S L+ L +D L + G L + + G S RF
Sbjct: 77 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFY 134
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
A I AL YLH + +IHRD+K NILL+ D Q++DFG A +S
Sbjct: 135 TA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 190
Query: 322 VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y++PE L D+++ G ++ +L++G P
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 317
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHR++ + N L+ + +++DFGL+ T T+
Sbjct: 318 LYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAH 373
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA---GEQSVLP 255
+ E++I + L +I L + + L+ ++ P+G L + L + EQ
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA- 126
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+ +A+AL Y H + VIHRD+K N+LL + +++DFG ++ P+
Sbjct: 127 -----TIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS--- 175
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ R+ + GT Y+ PE + ++K+D++ GV+ ELL G P
Sbjct: 176 -LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + ++++F+ G+L + L Q V V
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVL 359
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHR++ + N L+ + +++DFGL+ T T+
Sbjct: 360 LYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAH 415
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + K S K DV++FGV+L E+
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 173 KLVSSRCRQ-FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLIL 231
K+ S RQ ++ + LK+AT + E DI + I L+ + L L
Sbjct: 46 KISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYL 104
Query: 232 VSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNI 291
+ DFL G L L + E V+F +A +A AL++LHS +I+RD+K NI
Sbjct: 105 ILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENI 158
Query: 292 LLSSDFQPQLSDFGLAIWGPTDSTHMIRE--DVVGTFGYIAPEYLMHGKVSDKIDVYSFG 349
LL + +L+DFGL+ +S ++ GT Y+APE + + D +SFG
Sbjct: 159 LLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG 214
Query: 350 VVLLELLSGRRPIGFKNLKGPESLVKWAK 378
V++ E+L+G P K+ K +++ AK
Sbjct: 215 VLMFEMLTGTLPFQGKDRKETMTMILKAK 243
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 173 KLVSSRCRQ-FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLIL 231
K+ S RQ ++ + LK+AT + E DI + I L+ + L L
Sbjct: 45 KISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYL 103
Query: 232 VSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNI 291
+ DFL G L L + E V+F +A +A AL++LHS +I+RD+K NI
Sbjct: 104 ILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALDHLHSLG---IIYRDLKPENI 157
Query: 292 LLSSDFQPQLSDFGLAIWGPTDSTHMIRE--DVVGTFGYIAPEYLMHGKVSDKIDVYSFG 349
LL + +L+DFGL+ +S ++ GT Y+APE + + D +SFG
Sbjct: 158 LLDEEGHIKLTDFGLS----KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 350 VVLLELLSGRRPIGFKNLKGPESLVKWAK 378
V++ E+L+G P K+ K +++ AK
Sbjct: 214 VLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
D+ E+DI +S + +I L +N L ++ +F G+++ ++ E+ + ++
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELERPLTESQIQ 138
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI- 318
V +ALNYLH +IHRD+K+ NIL + D +L+DFG++ +T I
Sbjct: 139 V-VCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQ 190
Query: 319 -REDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRP 361
R+ +GT ++APE +M D K DV+S G+ L+E+ P
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 229 LILVSDFLPKGSLE---ESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
L + +F KG+LE E G VL E+ I + ++Y+HS + +IHRD
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLA----LELFEQITKGVDYIHS---KKLIHRD 161
Query: 286 VKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDV 345
+K SNI L Q ++ DFGL D R GT Y++PE + ++D+
Sbjct: 162 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 346 YSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPI--LKNGDTETLLDPKLSNEYDNAQM 403
Y+ G++L ELL ++ + +K L++G + D K + +
Sbjct: 219 YALGLILAELLH-----------VCDTAFETSKFFTDLRDGIISDIFDKK-----EKTLL 262
Query: 404 QRMLLAANLCINQSPQLRPNMGQVLKLLRGATHATDWVDRHA 445
Q++L ++ P+ RPN ++L+ L + + +RH
Sbjct: 263 QKLL-------SKKPEDRPNTSEILRTLTVWKKSPEKNERHT 297
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
D+ E+DI +S + +I L +N L ++ +F G+++ ++ E+ + ++
Sbjct: 53 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELERPLTESQIQ 111
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
V +ALNYLH +IHRD+K+ NIL + D +L+DFG++ T + R
Sbjct: 112 V-VCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRR 166
Query: 320 EDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRP 361
+ +GT ++APE +M D K DV+S G+ L+E+ P
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++ + GSL+ L Q + V + IA + YL + +HRD
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGA---VHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
D+ E+DI +S + +I L +N L ++ +F G+++ ++ E+ + ++
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD-AVMLELERPLTESQIQ 138
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI- 318
V +ALNYLH +IHRD+K+ NIL + D +L+DFG++ +T I
Sbjct: 139 V-VCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQ 190
Query: 319 -REDVVGTFGYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRP 361
R+ +GT ++APE +M D K DV+S G+ L+E+ P
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+F E + ++ ++ L GVC + +V++++P G+L + L + V V
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVL 132
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+A I+ A+ YL + IHRD+ + N L+ + +++DFGL+ T T+
Sbjct: 133 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAH 188
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+ APE L + S K DV++FGV+L E+
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 50 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 106
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 157
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 358 GRRP 361
G +P
Sbjct: 218 GSKP 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 48 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 156 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
Query: 358 GRRP 361
G +P
Sbjct: 216 GSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L++ +P G L
Sbjct: 55 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 162
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 163 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
Query: 358 GRRP 361
G +P
Sbjct: 223 GSKP 226
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E I + + + +L + L LV + G L+ ++ G Q+ P
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFY 291
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
A I L LH E +++RD+K NILL ++SD GLA+ P T R
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT GY+APE + + + + D ++ G +L E+++G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGV 258
+F SE I E +I L GV ++++++F+ G+L+ L G+ +V+
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-- 120
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ IA + YL +E S +HRD+ + NIL++S+ ++SDFGL+ + +S+
Sbjct: 121 -VGMLRGIASGMRYL-AEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 319 REDVVG---TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+G + APE + K + D +S+G+V+ E++S G RP
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E I + + + +L + L LV + G L+ ++ G Q+ P
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFY 291
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV 322
A I L LH E +++RD+K NILL ++SD GLA+ P T R
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT GY+APE + + + + D ++ G +L E+++G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 33/252 (13%)
Query: 122 KTLLNQSTSPTPHSQINSFSPKTE-NPFQMDIPCSEGKYDENTLTPSTELFLKLVSSRCR 180
KT ++ T P+ ++ F+ + + + +++ G++ E LKL R
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGE-----VCSGRLKLPGKRDV 72
Query: 181 QFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGS 240
+ + LK ++ DF E I + ++ L GV +++V +F+ G+
Sbjct: 73 AVAIKTLKVGYTEKQR--RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 241 LEESLHGA-GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
L+ L G+ +V+ + IA + YL +HRD+ + NIL++S+
Sbjct: 131 LDAFLRKHDGQFTVIQL---VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVC 184
Query: 300 QLSDFGL---------AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGV 350
++SDFGL A++ T +R + APE + + K + DV+S+G+
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVR--------WTAPEAIQYRKFTSASDVWSYGI 236
Query: 351 VLLELLS-GRRP 361
V+ E++S G RP
Sbjct: 237 VMWEVMSYGERP 248
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 24 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 80
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYSYNPSHNPEEQ 135
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 136 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 188
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
EV I L +I L V + L LV ++ G + + L G +F
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-- 121
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA----IWGPTDSTHMIR 319
I A+ Y H + ++HRD+K+ N+LL D +++DFG + + D+
Sbjct: 122 -QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT----- 172
Query: 320 EDVVGTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFKNLK 368
G+ Y APE L GK D ++DV+S GV+L L+SG P +NLK
Sbjct: 173 --FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 20 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 76
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF----------- 260
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYCYNPSHNPEEQ 131
Query: 261 -------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 132 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 184
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F EV +S L ++I ++ V ED+ LV +++ +L E + G SV + F
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV-DTAINF 116
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
I + + + H ++HRD+K NIL+ S+ ++ DFG+A ++++
Sbjct: 117 --TNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTN 170
Query: 321 DVVGTFGYIAPEYLMHGKVSDK-IDVYSFGVVLLELLSGRRP 361
V+GT Y +PE G+ +D+ D+YS G+VL E+L G P
Sbjct: 171 HVLGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 27 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 83
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYSYNPSHNPEEQ 138
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 139 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 191
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++ + GSL+ L Q + V + IA + YL +HRD
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYL---SDMGYVHRD 172
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 231
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 232 DVWSYGIVLWEVMSYGERP 250
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 35 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 91
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYSYNPSHNPEEQ 146
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 199
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 28 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 84
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYSYNPSHNPEEQ 139
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 140 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 192
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NIL+S+ ++ DFG+A DS + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIA-RAIADSGNSVX 174
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGV 258
+F SE I E +I L GV ++++++F+ G+L+ L G+ +V+
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ--- 117
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+ IA + YL +E S +HRD+ + NIL++S+ ++SDFGL+ + +S+
Sbjct: 118 LVGMLRGIASGMRYL-AEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 319 REDVVG---TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+G + APE + K + D +S+G+V+ E++S G RP
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E D+ + + K ITTL+ +DN L LV D+ G L +L E + RF
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARF 179
Query: 261 EVA--VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMI 318
+A V ++++ LH +HRD+K NIL+ + +L+DFG + D T +
Sbjct: 180 YLAEMVIAIDSVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT--V 231
Query: 319 REDV-VGTFGYIAPEYLM-----HGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ V VGT YI+PE L G+ + D +S GV + E+L G P
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E+ + L I L G E ++ + + L GSL + + EQ LP
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALY 189
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDF-QPQLSDFGLAIWGPTDS---THM 317
E L YLHS R ++H DVK+ N+LLSSD L DFG A+ D + +
Sbjct: 190 YLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + GT ++APE ++ K+DV+S ++L +L+G P
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 50 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 157
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 358 GRRP 361
G +P
Sbjct: 218 GSKP 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 76 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 132
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYSYNPSHNPEEQ 187
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 188 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 240
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 35 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 91
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF----------- 260
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QARRPPGLEYCYNPSHNPEEQ 146
Query: 261 -------EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 199
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAWN-----DFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + S +E+ A + DF E I + +I L GV +
Sbjct: 29 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+++V++ + GSL+ L Q + V + IA + YL +HRD
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV--GMLRGIASGMKYLSD---MGYVHRD 143
Query: 286 VKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKI 343
+ + NIL++S+ ++SDFGL+ + ++ + R + + +PE + + K +
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSAS 202
Query: 344 DVYSFGVVLLELLS-GRRP 361
DV+S+G+VL E++S G RP
Sbjct: 203 DVWSYGIVLWEVMSYGERP 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 50 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 157
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
Query: 358 GRRP 361
G +P
Sbjct: 218 GSKP 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWG------ 310
GV + + IAEA+ +LHS + ++HRD+K SNI + D ++ DFGL
Sbjct: 164 GVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 220
Query: 311 -------PTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELL 356
P +TH + VGT Y++PE + S K+D++S G++L ELL
Sbjct: 221 QTVLTPMPAYATHXGQ---VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL- 241
+ +EL++ATS A + E + +S++ + L G+C+ + L+ +P G L
Sbjct: 52 AIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLL 108
Query: 242 ---EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
E G Q +L W V IA+ +NYL R ++HRD+ + N+L+ +
Sbjct: 109 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 159
Query: 299 PQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS- 357
+++DFG A + E ++A E ++H + + DV+S+GV + EL++
Sbjct: 160 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
Query: 358 GRRP 361
G +P
Sbjct: 220 GSKP 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 153 PCSEGKYDENTLTPSTELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL- 211
P EG + + L + L K +R + + + LK ++ +D SE+++ +
Sbjct: 35 PLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIG 91
Query: 212 EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE---------- 261
+ K+I L G C +D L ++ ++ KG+L E L Q+ P G+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----QAREPPGLEYSYNPSHNPEEQ 146
Query: 262 --------VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
A +A + YL S+ IHRD+ + N+L++ D +++DFGLA D
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RD 199
Query: 314 STHM--IREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
H+ ++ G ++APE L + + DV+SFGV+L E+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDF-LPKGSL 241
+ +++ + Q + W D EV L + G + ++ LV ++ L S
Sbjct: 44 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD 103
Query: 242 EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
+H Q V E+A AL L S +IHRDVK+ NILLS +L
Sbjct: 104 LLEVHKKPLQEV-------EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 302 SDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLM---HGKVSDKIDVYSFGVVLLELLS 357
DFG A I P + VGT ++APE ++ G+ K+DV+S G+ +E L+
Sbjct: 157 GDFGSASIMAPANX-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LA 208
Query: 358 GRRPIGFKNLKGPESLVKWAK---PILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCI 414
R+P F N+ +L A+ P L++G S + N + C+
Sbjct: 209 ERKPPLF-NMNAMSALYHIAQNESPALQSG--------HWSEYFRN--------FVDSCL 251
Query: 415 NQSPQLRPNMGQVLK 429
+ PQ RP +LK
Sbjct: 252 QKIPQDRPTSEVLLK 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NI++S+ ++ DFG+A DS + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA-RAIADSGNSVT 174
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 183 SYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDF-LPKGSL 241
+ +++ + Q + W D EV L + G + ++ LV ++ L S
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD 142
Query: 242 EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
+H Q V E+A AL L S +IHRDVK+ NILLS +L
Sbjct: 143 LLEVHKKPLQEV-------EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 302 SDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLM---HGKVSDKIDVYSFGVVLLELLS 357
DFG A I P + VGT ++APE ++ G+ K+DV+S G+ +E L+
Sbjct: 196 GDFGSASIMAPANX-------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LA 247
Query: 358 GRRPIGFKNLKGPESLVKWAK---PILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCI 414
R+P F N+ +L A+ P L++G S + N + C+
Sbjct: 248 ERKPPLF-NMNAMSALYHIAQNESPALQSG--------HWSEYFRN--------FVDSCL 290
Query: 415 NQSPQLRPNMGQVLK 429
+ PQ RP +LK
Sbjct: 291 QKIPQDRPTSEVLLK 305
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 202 SSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+ E+ + L I L G E ++ + + L GSL + + EQ LP
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALY 170
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDF-QPQLSDFGLAIWGPTDSTH---M 317
E L YLHS R ++H DVK+ N+LLSSD L DFG A+ D +
Sbjct: 171 YLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + GT ++APE ++ K+DV+S ++L +L+G P
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NI++S+ ++ DFG+A DS + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA-RAIADSGNSVT 174
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 173 KLVSSRC--RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLI 230
K+ C + S ++KQ T + S EV + L+ +I L + Y
Sbjct: 48 KITGQECAVKVISKRQVKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
LV + G L + + S + + + + Y+H ++HRD+K N
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHK---NKIVHRDLKPEN 156
Query: 291 ILL---SSDFQPQLSDFGLAIWGPTDSTHM----IREDVVGTFGYIAPEYLMHGKVSDKI 343
+LL S D ++ DFGL STH +D +GT YIAPE ++HG +K
Sbjct: 157 LLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 208
Query: 344 DVYSFGVVLLELLSGRRPIGFKN 366
DV+S GV+L LLSG P N
Sbjct: 209 DVWSTGVILYILLSGCPPFNGAN 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL 241
++ + LK+AT + E DI + + + L+ + L L+ DFL G L
Sbjct: 59 YAMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL 117
Query: 242 EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
L + E V+F +A +A L++LHS +I+RD+K NILL + +L
Sbjct: 118 FTRL--SKEVMFTEEDVKFYLA-ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKL 171
Query: 302 SDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+DFGL+ GT Y+APE + S D +S+GV++ E+L+G P
Sbjct: 172 TDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
Query: 362 IGFKNLKGPESLVKWAK 378
K+ K +L+ AK
Sbjct: 230 FQGKDRKETMTLILKAK 246
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NI++S+ ++ DFG+A DS + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA-RAIADSGNSVT 174
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 173 KLVSSRC--RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLI 230
K+ C + S ++KQ T + S EV + L+ +I L + Y
Sbjct: 71 KITGQECAVKVISKRQVKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFY 125
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
LV + G L + + S + + + + Y+H ++HRD+K N
Sbjct: 126 LVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPEN 179
Query: 291 ILL---SSDFQPQLSDFGLAIWGPTDSTHM----IREDVVGTFGYIAPEYLMHGKVSDKI 343
+LL S D ++ DFGL STH +D +GT YIAPE ++HG +K
Sbjct: 180 LLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 231
Query: 344 DVYSFGVVLLELLSGRRPIGFKN 366
DV+S GV+L LLSG P N
Sbjct: 232 DVWSTGVILYILLSGCPPFNGAN 254
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NI++S+ ++ DFG+A DS + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA-RAIADSGNSVT 174
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 173 KLVSSRC--RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLI 230
K+ C + S ++KQ T + S EV + L+ +I L + Y
Sbjct: 48 KITGQECAVKVISKRQVKQKTDKES-----LLREVQLLKQLDHPNIXKLYEFFEDKGYFY 102
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
LV + G L + + S + A I + L+ + ++HRD+K N
Sbjct: 103 LVGEVYTGGELFDEIISRKRFS------EVDAARIIRQVLSGITYXHKNKIVHRDLKPEN 156
Query: 291 ILL---SSDFQPQLSDFGLAIWGPTDSTHM----IREDVVGTFGYIAPEYLMHGKVSDKI 343
+LL S D ++ DFGL STH +D +GT YIAPE ++HG +K
Sbjct: 157 LLLESKSKDANIRIIDFGL-------STHFEASKKXKDKIGTAYYIAPE-VLHGTYDEKC 208
Query: 344 DVYSFGVVLLELLSGRRPIGFKN 366
DV+S GV+L LLSG P N
Sbjct: 209 DVWSTGVILYILLSGCPPFNGAN 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 173 KLVSSRC--RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLI 230
K+ C + S ++KQ T + S EV + L+ +I L + Y
Sbjct: 72 KITGQECAVKVISKRQVKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFY 126
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
LV + G L + + S + + + + Y+H ++HRD+K N
Sbjct: 127 LVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPEN 180
Query: 291 ILL---SSDFQPQLSDFGLAIWGPTDSTHM----IREDVVGTFGYIAPEYLMHGKVSDKI 343
+LL S D ++ DFGL STH +D +GT YIAPE ++HG +K
Sbjct: 181 LLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 232
Query: 344 DVYSFGVVLLELLSGRRPIGFKN 366
DV+S GV+L LLSG P N
Sbjct: 233 DVWSTGVILYILLSGCPPFNGAN 255
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAW-----NDFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + E+ A + + DF SE I + +I L GV +
Sbjct: 42 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 101
Query: 226 DNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHR 284
++++++++ GSL+ L G +V+ + I + YL + +HR
Sbjct: 102 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYLSDMSA---VHR 155
Query: 285 DVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
D+ + NIL++S+ ++SDFG++ + ++ + R + + APE + + K +
Sbjct: 156 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSA 214
Query: 343 IDVYSFGVVLLELLS-GRRP 361
DV+S+G+V+ E++S G RP
Sbjct: 215 SDVWSYGIVMWEVMSYGERP 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 173 KLVSSRC--RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLI 230
K+ C + S ++KQ T + S EV + L+ +I L + Y
Sbjct: 54 KITGQECAVKVISKRQVKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFY 108
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
LV + G L + + S + + + + Y+H ++HRD+K N
Sbjct: 109 LVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPEN 162
Query: 291 ILL---SSDFQPQLSDFGLAIWGPTDSTHM----IREDVVGTFGYIAPEYLMHGKVSDKI 343
+LL S D ++ DFGL STH +D +GT YIAPE ++HG +K
Sbjct: 163 LLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKC 214
Query: 344 DVYSFGVVLLELLSGRRPIGFKN 366
DV+S GV+L LLSG P N
Sbjct: 215 DVWSTGVILYILLSGCPPFNGAN 237
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV-----LPW 256
SE+ I S L Q ++I L G C +++++++ G L L E + P
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 257 GVR--FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+R + +A+ + +L S+ IHRDV + N+LL++ ++ DFGLA DS
Sbjct: 158 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLE-QKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+EL++AT + EVDI + +I L + + LV D + KG L +
Sbjct: 51 QELREATLK----------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 100
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
L E+ L ++ A+ E + LH ++HRD+K NILL D +L+D
Sbjct: 101 YL---TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD 154
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYL------MHGKVSDKIDVYSFGVVLLELLS 357
FG + D +RE V GT Y+APE + H ++D++S GV++ LL+
Sbjct: 155 FGFSC--QLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 358 GRRPI 362
G P
Sbjct: 212 GSPPF 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPTDSTHMIR 319
A I L +LHS + +++RD+K NILL D +++DFG+ + G +
Sbjct: 125 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN---- 177
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT YIAPE L+ K + +D +SFGV+L E+L G+ P
Sbjct: 178 -EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
EV +ALN+ H +IHRDVK +NI++S+ ++ DFG+A DS + +
Sbjct: 136 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA-RAIADSGNSVT 191
Query: 320 ED--VVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ V+GT Y++PE V + DVYS G VL E+L+G P
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLE-QKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+EL++AT + EVDI + +I L + + LV D + KG L +
Sbjct: 64 QELREATLK----------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 113
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
L E+ L ++ A+ E + LH ++HRD+K NILL D +L+D
Sbjct: 114 YL---TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD 167
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYL------MHGKVSDKIDVYSFGVVLLELLS 357
FG + D +RE V GT Y+APE + H ++D++S GV++ LL+
Sbjct: 168 FGFSC--QLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 358 GRRPI 362
G P
Sbjct: 225 GSPPF 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV-----LPW 256
SE+ I S L Q ++I L G C +++++++ G L L E + P
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 257 GVR--FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDS 314
+R + +A+ + +L S+ IHRDV + N+LL++ ++ DFGLA DS
Sbjct: 150 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 47/258 (18%)
Query: 193 QFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE---ESLHGAG 249
++ W+ F + + +S +S T C L + +F KG+LE E G
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTK----C-----LFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 250 EQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIW 309
VL E+ I + ++Y+HS + +I+RD+K SNI L Q ++ DFGL
Sbjct: 119 LDKVLA----LELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKG 369
D R GT Y++PE + ++D+Y+ G++L ELL
Sbjct: 172 LKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-----------V 217
Query: 370 PESLVKWAKPI--LKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQV 427
++ + +K L++G + D K + +Q++L ++ P+ RPN ++
Sbjct: 218 CDTAFETSKFFTDLRDGIISDIFDKK-----EKTLLQKLL-------SKKPEDRPNTSEI 265
Query: 428 LKLLRGATHATDWVDRHA 445
L+ L + + +RH
Sbjct: 266 LRTLTVWKKSPEKNERHT 283
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
SE+ I S L Q ++I L G C +++++++ G L L + VL F
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR--KSRVLETDPAFA 155
Query: 262 VAVAIAEALNYLHSE----------CSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGP 311
+A + A + LH S+ IHRDV + N+LL++ ++ DFGLA
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 312 TDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
DS ++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAW-----NDFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + E+ A + + DF SE I + +I L GV +
Sbjct: 27 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 86
Query: 226 DNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHR 284
++++++++ GSL+ L G +V+ + I + YL S+ S +HR
Sbjct: 87 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL-SDMS--YVHR 140
Query: 285 DVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
D+ + NIL++S+ ++SDFG++ + ++ + R + + APE + + K +
Sbjct: 141 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSA 199
Query: 343 IDVYSFGVVLLELLS-GRRP 361
DV+S+G+V+ E++S G RP
Sbjct: 200 SDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAW-----NDFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + E+ A + + DF SE I + +I L GV +
Sbjct: 21 FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 80
Query: 226 DNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHR 284
++++++++ GSL+ L G +V+ + I + YL S+ S +HR
Sbjct: 81 CKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL-SDMS--YVHR 134
Query: 285 DVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
D+ + NIL++S+ ++SDFG++ + ++ + R + + APE + + K +
Sbjct: 135 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSA 193
Query: 343 IDVYSFGVVLLELLS-GRRP 361
DV+S+G+V+ E++S G RP
Sbjct: 194 SDVWSYGIVMWEVMSYGERP 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPTDSTHMIR 319
A I L +LHS + +++RD+K NILL D +++DFG+ + G +
Sbjct: 124 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF-- 178
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT YIAPE L+ K + +D +SFGV+L E+L G+ P
Sbjct: 179 ---CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 175 VSSRC------RQFSYE--ELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIED 226
V RC +QF+ + ++ + TS + D E I L+ I L D
Sbjct: 39 VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD 98
Query: 227 NYLILVSDFLPKGSL-EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
L +V +F+ L E + A V V I EAL Y H +IHRD
Sbjct: 99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRD 155
Query: 286 VKSSNILLSS--DFQP-QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
VK N+LL+S + P +L DFG+AI + ++ VGT ++APE +
Sbjct: 156 VKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRVGTPHFMAPEVVKREPYGKP 213
Query: 343 IDVYSFGVVLLELLSGRRPI 362
+DV+ GV+L LLSG P
Sbjct: 214 VDVWGCGVILFILLSGCLPF 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
+P + ++AV+I +AL +LHS+ S VIHRDVK SN+L+++ Q ++ DFG++ + D
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
Query: 314 STHMIREDV-VGTFGYIAPEY----LMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ +D+ G Y+APE L S K D++S G+ ++EL R P
Sbjct: 164 ----VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVGTF 326
L++LH+ C ++HRD+K NIL++S +L+DFGLA I+ S M + VV T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDPVVVTL 175
Query: 327 GYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y APE L+ + +D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 171 FLKLVSSRCRQFSYEELKQATSQFSSAW-----NDFSSEVDITSSLEQKSITTLNGVCIE 225
F ++ S R + EL A + DF E I + +I L GV +
Sbjct: 35 FGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTK 94
Query: 226 DNYLILVSDFLPKGSLEESLH-GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHR 284
+++V++++ GSL+ L G+ +V+ + I+ + YL +HR
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL---VGMLRGISAGMKYL---SDMGYVHR 148
Query: 285 DVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
D+ + NIL++S+ ++SDFGL+ + ++ + R + + APE + K +
Sbjct: 149 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAFRKFTSA 207
Query: 343 IDVYSFGVVLLELLS-GRRP 361
DV+S+G+V+ E++S G RP
Sbjct: 208 SDVWSYGIVMWEVVSYGERP 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL---EESLHGAGEQ- 251
S ++DF +E+ I + ++ + T G+ + + ++ +++ S+ +E +
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144
Query: 252 -SVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWG 310
+P V + ++ + +Y+H+E + + HRDVK SNIL+ + + +LSDFG
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG----- 197
Query: 311 PTDSTHMIREDVV---GTFGYIAPEYLMHGKVSD--KIDVYSFGVVLLELLSGRRPIGFK 365
+S +M+ + + GT+ ++ PE+ + + K+D++S G+ L + P K
Sbjct: 198 --ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDN------------YLILVSDFLPKGSLEESLHGAGEQ 251
EV + LE I +E N YL + K +L++ ++G
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 252 SVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGP 311
V + + IAEA+ +LHS + ++HRD+K SNI + D ++ DFGL
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 312 TDS----------THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELL 356
D + VGT Y++PE + S K+D++S G++L ELL
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 206 DITSSLEQKSITTLNG---------VCIED-NYLILVSDFLPKGSLEESLHGAGEQSVLP 255
D+ ++ +K + L G C + + L V +++ G L + G P
Sbjct: 384 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-P 442
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
V + +AI L +L S + +I+RD+K N++L S+ +++DFG+ IW
Sbjct: 443 HAVFYAAEIAIG--LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + GT YIAPE + + +D ++FGV+L E+L+G+ P
Sbjct: 498 TT-----KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVG 324
+ L++LHS V+HRD+K NIL++S Q +L+DFGLA I+ S M VV
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVV 181
Query: 325 TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
T Y APE L+ + +D++S G + E+ R+P+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVGTF 326
L++LH+ C ++HRD+K NIL++S +L+DFGLA I+ S M VV T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTL 175
Query: 327 GYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y APE L+ + +D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
DF SE I + +I L GV ++V++++ GSL+ L Q + V
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL---------AIW 309
+ + + YL +HRD+ + N+L+ S+ ++SDFGL A +
Sbjct: 155 --GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
T IR + APE + S DV+SFGVV+ E+L+ G RP
Sbjct: 210 TTTGGKIPIR--------WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVG 324
+ L++LHS V+HRD+K NIL++S Q +L+DFGLA I+ S M VV
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVV 181
Query: 325 TFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
T Y APE L+ + +D++S G + E+ R+P+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L I L G E ++ + + L GSL + + G LP
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYL 156
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDF-QPQLSDFGLAIWGPTDS---THMIR 319
E L YLH+ R ++H DVK+ N+LLSSD + L DFG A+ D + +
Sbjct: 157 GQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ + GT ++APE +M K+D++S ++L +L+G P + +GP L
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCL 266
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L I L G E ++ + + L GSL + + G LP
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYL 170
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDF-QPQLSDFGLAIWGPTDS---THMIR 319
E L YLH+ R ++H DVK+ N+LLSSD + L DFG A+ D + +
Sbjct: 171 GQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ + GT ++APE +M K+D++S ++L +L+G P + +GP L
Sbjct: 228 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCL 280
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVGTF 326
L++LH+ C ++HRD+K NIL++S +L+DFGLA I+ S M VV T
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALTPVVVTL 183
Query: 327 GYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y APE L+ + +D++S G + E+ R+P+
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 185 EELKQATSQFSSAWNDFSSEVDITSSLE-QKSITTLNGVCIEDNYLILVSDFLPKGSLEE 243
+EL++AT + EVDI + +I L + + LV D + KG L +
Sbjct: 64 QELREATLK----------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 113
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
L E+ L ++ A+ E + LH ++HRD+K NILL D +L+D
Sbjct: 114 YL---TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD 167
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYL------MHGKVSDKIDVYSFGVVLLELLS 357
FG + D +R V GT Y+APE + H ++D++S GV++ LL+
Sbjct: 168 FGFSC--QLDPGEKLR-SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 358 GRRPI 362
G P
Sbjct: 225 GSPPF 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 253 VLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
V+P + ++ +A +ALN+L +IHRD+K SNILL +L DFG++
Sbjct: 121 VIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS-GQLV 177
Query: 313 DSTHMIREDVVGTFGYIAPEYL----MHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLK 368
DS R+ G Y+APE + + DV+S G+ L EL +GR P N
Sbjct: 178 DSIAKTRD--AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN-- 233
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
S+ ++K GD P+LSN + + NLC+ + RP ++L
Sbjct: 234 ---SVFDQLTQVVK-GDP-----PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 429 K 429
K
Sbjct: 285 K 285
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
+P + ++AV+I +AL +LHS+ S VIHRDVK SN+L+++ Q ++ DFG++ +
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207
Query: 314 STHMIREDVVGTFGYIAPEY----LMHGKVSDKIDVYSFGVVLLELLSGRRP 361
I G Y+APE L S K D++S G+ ++EL R P
Sbjct: 208 VAKTID---AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ L++LHS V+HRD+K NIL++S Q +L+DFGLA S M VV T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALTSVVVT 182
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y APE L+ + +D++S G + E+ R+P+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L I L G E ++ + + L GSL + + G LP
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYL 172
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDF-QPQLSDFGLAIWGPTDS---THMIR 319
E L YLH+ R ++H DVK+ N+LLSSD + L DFG A+ D + +
Sbjct: 173 GQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ + GT ++APE +M K+D++S ++L +L+G P + +GP L
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCL 282
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 229 LILVSDFLPKGSLEESL--HGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDV 286
L + D + G L L HG ++ +RF A I L ++H+ R V++RD+
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-YAAEIILGLEHMHN---RFVVYRDL 318
Query: 287 KSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDV 345
K +NILL ++SD GLA H VGT GY+APE L G D D
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 346 YSFGVVLLELLSGRRPI 362
+S G +L +LL G P
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 229 LILVSDFLPKGSLEESL--HGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDV 286
L + D + G L L HG ++ +RF A I L ++H+ R V++RD+
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-YAAEIILGLEHMHN---RFVVYRDL 317
Query: 287 KSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDV 345
K +NILL ++SD GLA H VGT GY+APE L G D D
Sbjct: 318 KPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 346 YSFGVVLLELLSGRRPI 362
+S G +L +LL G P
Sbjct: 374 FSLGCMLFKLLRGHSPF 390
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWG 310
Q +P + ++ VAI +AL YL + VIHRDVK SNILL Q +L DFG++
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175
Query: 311 PTDSTHMIREDVVGTFGYIAPEYL-----MHGKVSDKIDVYSFGVVLLELLSGRRPIGFK 365
D ++ G Y+APE + + DV+S G+ L+EL +G+ P +K
Sbjct: 176 VDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP--YK 230
Query: 366 NLK 368
N K
Sbjct: 231 NCK 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 229 LILVSDFLPKGSLEESL--HGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDV 286
L + D + G L L HG ++ +RF A I L ++H+ R V++RD+
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-YAAEIILGLEHMHN---RFVVYRDL 318
Query: 287 KSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDV 345
K +NILL ++SD GLA H VGT GY+APE L G D D
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 346 YSFGVVLLELLSGRRPI 362
+S G +L +LL G P
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 229 LILVSDFLPKGSLEESL--HGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDV 286
L + D + G L L HG ++ +RF A I L ++H+ R V++RD+
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-YAAEIILGLEHMHN---RFVVYRDL 318
Query: 287 KSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDV 345
K +NILL ++SD GLA H VGT GY+APE L G D D
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 346 YSFGVVLLELLSGRRPI 362
+S G +L +LL G P
Sbjct: 375 FSLGCMLFKLLRGHSPF 391
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
SE+ I S L Q ++I L G C +++++++ G L L + VL F
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR--KSRVLETDPAFA 155
Query: 262 VAVAIAEALNYLHSE----------CSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGP 311
+A + + LH S+ IHRDV + N+LL++ ++ DFGLA
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 312 TDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
DS ++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 206 DITSSLEQKSITTLNGV---------CIED-NYLILVSDFLPKGSLEESLHGAGEQSVLP 255
D+ ++ +K + L G C + + L V +++ G L + G P
Sbjct: 63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-P 121
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
V + +AI L +L S + +I+RD+K N++L S+ +++DFG+ IW
Sbjct: 122 HAVFYAAEIAIG--LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + GT YIAPE + + +D ++FGV+L E+L+G+ P
Sbjct: 177 TT-----KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVGTF 326
L++LH+ C ++HRD+K NIL++S +L+DFGLA I+ S M VV T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPVVVTL 175
Query: 327 GYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
Y APE L+ + +D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I L +LH R +I+RD+K N+LL D ++SD GLA+ T + GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGT 352
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
G++APE L+ + +D ++ GV L E+++ R P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I L +LH R +I+RD+K N+LL D ++SD GLA+ T + GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGT 352
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
G++APE L+ + +D ++ GV L E+++ R P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I L +LH R +I+RD+K N+LL D ++SD GLA+ T + GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGT 352
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
G++APE L+ + +D ++ GV L E+++ R P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I L +LH R +I+RD+K N+LL D ++SD GLA+ T + GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGT 352
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
G++APE L+ + +D ++ GV L E+++ R P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDV 322
+ + Y+H ++HRD+K NILL S D ++ DFGL+ ++ +D
Sbjct: 130 VFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDR 183
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
+GT YIAPE ++ G +K DV+S GV+L LLSG P KN
Sbjct: 184 IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I+ AL +LH + +I+RD+K NI+L+ +L+DFGL D T + GT
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGT 184
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLK 368
Y+APE LM + +D +S G ++ ++L+G P +N K
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I+ AL +LH + +I+RD+K NI+L+ +L+DFGL D T + GT
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGT 184
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLK 368
Y+APE LM + +D +S G ++ ++L+G P +N K
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +++ G L + G+ P V + ++I L +LH R +I+RD+K
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKE-PQAVFYAAEISIG--LFFLHK---RGIIYRDLKL 148
Query: 289 SNILLSSDFQPQLSDFGLAIWGPTDSTHMI----REDVVGTFGYIAPEYLMHGKVSDKID 344
N++L S+ +++DFG+ HM+ + GT YIAPE + + +D
Sbjct: 149 DNVMLDSEGHIKIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 345 VYSFGVVLLELLSGRRP------------IGFKNLKGPESLVKWAKPILKN 383
+++GV+L E+L+G+ P I N+ P+SL K A I K
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKG 253
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+++ LV D + G L E + +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCI 134
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP---QLSDFGLAI-WGPTDSTHMIR 319
I E++ Y HS ++HR++K N+LL+S + +L+DFGLAI +++ H
Sbjct: 135 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 188
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L S +D+++ GV+L LL G P
Sbjct: 189 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDV 322
+ + Y+H ++HRD+K NILL S D ++ DFGL+ ++ +D
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDR 183
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
+GT YIAPE ++ G +K DV+S GV+L LLSG P KN
Sbjct: 184 IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDV 322
+ + Y+H ++HRD+K NILL S D ++ DFGL+ ++ +D
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDR 183
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
+GT YIAPE ++ G +K DV+S GV+L LLSG P KN
Sbjct: 184 IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L++++
Sbjct: 45 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 103 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D ++ + D ++APE +
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 340 SDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEY 398
+ + DV+SFGV+L E+ S G P + +K E + LK G + +Y
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCR----RLKEGTRMR------APDY 266
Query: 399 DNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHATDWVDR 443
+M + +L C + P RP ++++ L A DR
Sbjct: 267 TTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L++++
Sbjct: 45 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 103 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D ++ + D ++APE +
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 340 SDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEY 398
+ + DV+SFGV+L E+ S G P + +K E + LK G + +Y
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCR----RLKEGTRMR------APDY 266
Query: 399 DNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHATDWVDR 443
+M + +L C + P RP ++++ L A DR
Sbjct: 267 TTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 325 TFGYIAPEYLMHGKVSDK-IDVYSFGVVLLELLSGR 359
T Y APE +++ K K ID++S G +L E+LS R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 188 KQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKG----SLEE 243
KQ + + N F E+ I LE + L ++ + +V D L G L++
Sbjct: 50 KQKCVERNEVRNVFK-ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108
Query: 244 SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSD 303
++H E L + AL+YL ++ +IHRD+K NILL ++D
Sbjct: 109 NVHFKEETVKL-------FICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITD 158
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGK---VSDKIDVYSFGVVLLELLSGRR 360
F +A P ++ + GT Y+APE K S +D +S GV ELL GRR
Sbjct: 159 FNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
Query: 361 P 361
P
Sbjct: 216 P 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E D+ + + + IT L+ ++N+L LV D+ G L +L E + RF
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARF 195
Query: 261 ---EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
E+ +AI ++++ LH +HRD+K N+LL + +L+DFG + D T
Sbjct: 196 YIGEMVLAI-DSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-- 246
Query: 318 IREDV-VGTFGYIAPEYLM-----HGKVSDKIDVYSFGVVLLELLSGRRPI 362
++ V VGT YI+PE L GK + D +S GV + E+L G P
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
+E++ +L + I L V N + +V ++ P G L + + S V F
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF 114
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
I A+ Y+HS+ HRD+K N+L + +L DFGL P + +
Sbjct: 115 R---QIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQ 167
Query: 321 DVVGTFGYIAPEYLMHGK--VSDKIDVYSFGVVLLELLSGRRPIGFKN--------LKGP 370
G+ Y APE L+ GK + + DV+S G++L L+ G P N ++G
Sbjct: 168 TCCGSLAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK 226
Query: 371 ESLVKWAKP 379
+ KW P
Sbjct: 227 YDVPKWLSP 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E D+ + + + IT L+ ++N+L LV D+ G L +L E + RF
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARF 179
Query: 261 ---EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
E+ +AI ++++ LH +HRD+K N+LL + +L+DFG + D T
Sbjct: 180 YIGEMVLAI-DSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-- 230
Query: 318 IREDV-VGTFGYIAPEYLM-----HGKVSDKIDVYSFGVVLLELLSGRRPI 362
++ V VGT YI+PE L GK + D +S GV + E+L G P
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E I +I L GVC + + +V + + G L G + L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLL 216
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
++ A + YL S+C IHRD+ + N L++ ++SDFG M RE
Sbjct: 217 QMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFG-----------MSRE 262
Query: 321 DVVGTFG-----------YIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+ G + + APE L +G+ S + DV+SFG++L E S
Sbjct: 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL-----EESLHGAGEQSVLPWG 257
+E+ + ++ ++I L + N+L LV + G L E+ + + S L
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL--- 125
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLA-IWGPTD 313
+R + +A+ YLH ++HRD+K N+L S + + +SDFGL+ + G D
Sbjct: 126 IR-----QVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 314 STHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT GY+APE L S +D +S GV+ LL G P
Sbjct: 178 ----VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 325 TFGYIAPEYLMHGKVSDK-IDVYSFGVVLLELLSGR 359
T Y APE +++ K K ID++S G +L E+LS R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L ++ ++ G L E + AG S F+ +
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ---QLLSG 128
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS--DFGLAIWGPTDSTHMIREDVVGTFG 327
++Y HS + HRD+K N LL P+L DFG + + H + VGT
Sbjct: 129 VSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFG---YSKSSVLHSQPKSTVGTPA 182
Query: 328 YIAPEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
YIAPE L+ + KI DV+S GV L +L G P F++ + P K + IL
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP--FEDPEEPRDYRKTIQRIL 235
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM-IREDVVG 324
I L Y+HS V+HRD+K SN+LL++ ++ DFGLA D H + V
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 325 TFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y APE +++ K + ID++S G +L E+LS R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I TL G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-----HGAGEQSVLPWGV 258
E I L+ +I L+ E+++ LV D + G L E + + + S
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------ 108
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAI-WGPTDS 314
I E++ Y HS ++HR++K N+LL+S + +L+DFGLAI +++
Sbjct: 109 --HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H GT GY++PE L S +D+++ GV+L LL G P
Sbjct: 164 WH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+++ LV D + G L E + +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCI 111
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAI-WGPTDSTHMIR 319
I E++ Y HS ++HR++K N+LL+S + +L+DFGLAI +++ H
Sbjct: 112 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L S +D+++ GV+L LL G P
Sbjct: 166 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+++ LV D + G L E + +
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCI 110
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAI-WGPTDSTHMIR 319
I E++ Y HS ++HR++K N+LL+S + +L+DFGLAI +++ H
Sbjct: 111 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 164
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L S +D+++ GV+L LL G P
Sbjct: 165 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
DF SE I + +I L GV ++V++++ GSL+ L Q + V
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL---------AIW 309
+ + + YL +HRD+ + N+L+ S+ ++SDFGL A
Sbjct: 155 --GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
T IR + APE + S DV+SFGVV+ E+L+ G RP
Sbjct: 210 TTTGGKIPIR--------WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 38/285 (13%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L++++
Sbjct: 45 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 103 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D + + D ++APE +
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 340 SDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEY 398
+ + DV+SFGV+L E+ S G P + +K E + LK G + +Y
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCR----RLKEGTRMR------APDY 266
Query: 399 DNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHATDWVDR 443
+M + +L C + P RP ++++ L A DR
Sbjct: 267 TTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG---VR 259
+EV I L+ SI L + NY+ LV + G + L + V P+ R
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEAR 115
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ I L YLHS ++HRD+ SN+LL+ + +++DFGLA H
Sbjct: 116 HFMHQIITGML-YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQ--LKMPHEKH 169
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT YI+PE + DV+S G + LL GR P
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 261 EVAVAIAEALN---YLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDS 314
+ AV I + L+ YLH ++HRD+K N+LL S D ++ DFGL+ ++
Sbjct: 137 DAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFEN 191
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIG 363
++E + GT YIAPE ++ K +K DV+S GV+L LL+G P G
Sbjct: 192 QKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFG 238
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDI 177
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 235
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P++RP +++
Sbjct: 236 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 281 NLLKDDLHPS 290
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDI 180
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 238
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P++RP +++
Sbjct: 239 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 284 NLLKDDLHPS 293
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 131 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 183 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 131 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 183 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L +V ++ G L E + AG S F+ ++
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 126
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS--DFGLAIWGPTDSTHMIREDVVGTFG 327
++Y H+ V HRD+K N LL P+L DFG + + H + VGT
Sbjct: 127 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFG---YSKSSVLHSQPKSTVGTPA 180
Query: 328 YIAPEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
YIAPE L+ + K+ DV+S GV L +L G P F++ + P++ K IL
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRIL 233
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E I +I L GVC + + +V + + G L G + L
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLL 216
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIW---GPTDSTHM 317
++ A + YL S+C IHRD+ + N L++ ++SDFG++ G ++
Sbjct: 217 QMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 318 IREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+R+ V + APE L +G+ S + DV+SFG++L E S
Sbjct: 274 LRQVPVK---WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 108
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 109 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 161 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 120
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 121 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 173 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFG 327
+ L YLH IHRD+K+ NILL+++ +L+DFG+A G R V+GT
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPF 190
Query: 328 YIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
++APE + + D++S G+ +E+ G+ P
Sbjct: 191 WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 128
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 129 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 181 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 110
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 111 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 163 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 114
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 115 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 167 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L +V ++ G L E + AG S F+ ++
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS--DFGLAIWGPTDSTHMIREDVVGTFG 327
++Y H+ V HRD+K N LL P+L DFG + + H + VGT
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFG---YSKSSVLHSQPKSTVGTPA 181
Query: 328 YIAPEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
YIAPE L+ + K+ DV+S GV L +L G P F++ + P++ K IL
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + LV D + G L E + S
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCI 136
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPTDSTHMIRE 320
I E++N++H ++HRD+K N+LL+S + +L+DFGLAI
Sbjct: 137 HQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWF 191
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 102 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 157
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 158 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 217
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 218 HFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 115 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 230
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 231 HFESFKRADIYAMGLVFWEI 250
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 473
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 474 -----ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 526 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 581
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 472
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 473 -----ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 525 Y-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 580
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 82 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 137
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 138 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 197
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 198 HFESFKRADIYAMGLVFWEI 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L +V ++ G L E + AG S F+ ++
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
++Y H+ V HRD+K N LL P+L + + H +D VGT YI
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFG-YSKSSVLHSQPKDTVGTPAYI 183
Query: 330 APEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
APE L+ + K+ DV+S GV L +L G P F++ + P++ K IL
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 77 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 132
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 133 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 192
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 193 HFESFKRADIYAMGLVFWEI 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-----H---GAGE- 250
+F E + + L+ ++ L GV +D L ++ + G L E L H G+ +
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 251 ----QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
+S L + IA + YL S V+H+D+ + N+L+ ++SD GL
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 307 AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GF 364
+ + + + ++APE +M+GK S D++S+GVVL E+ S G +P G+
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 365 KN 366
N
Sbjct: 252 SN 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 79 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 134
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 135 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 194
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 195 HFESFKRADIYAMGLVFWEI 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 43/257 (16%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-----GAG- 249
S D SE ++ + + L G C +D L+L+ ++ GSL L G G
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 250 ---------------EQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLS 294
++ L G A I++ + YL ++HRD+ + NIL++
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+ ++SDFGL+ + +++ R ++A E L + + DV+SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 355 LLSGRRPIGFKNLKG--PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANL 412
+++ +G G PE L +LK G + P +E +M R++L
Sbjct: 245 IVT----LGGNPYPGIPPERLFN----LLKTG--HRMERPDNCSE----EMYRLMLQ--- 287
Query: 413 CINQSPQLRPNMGQVLK 429
C Q P RP + K
Sbjct: 288 CWKQEPDKRPVFADISK 304
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDI 180
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 238
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P +RP +++
Sbjct: 239 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 284 NLLKDDLHPS 293
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 213 QKSITTLNGVCIE------DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAI 266
++I T G I+ D+ L LV +F GS+ + + ++ + + + I
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-ICREI 138
Query: 267 AEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTF 326
L++LH VIHRD+K N+LL+ + + +L DFG++ D T R +GT
Sbjct: 139 LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTP 193
Query: 327 GYIAPEYLMHGKVSD-----KIDVYSFGVVLLELLSGRRPI 362
++APE + + D K D++S G+ +E+ G P+
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L +V ++ G L E + AG S F+ ++
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQL--SDFGLAIWGPTDSTHMIREDVVGTFG 327
++Y H+ V HRD+K N LL P+L +DFG + H + VGT
Sbjct: 128 VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFG---YSKASVLHSQPKSAVGTPA 181
Query: 328 YIAPEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
YIAPE L+ + K+ DV+S GV L +L G P F++ + P++ K IL
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDI 180
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 238
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P++RP +++
Sbjct: 239 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 284 NLLKDDLHPS 293
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 33/151 (21%)
Query: 230 ILVSDFLPKGSLEE--SLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSR-----PVI 282
+LV ++ P GSL + SLH + W +A ++ L YLH+E R P I
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 283 -HRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR---ED-----VVGTFGYIAPEY 333
HRD+ S N+L+ +D +SDFGL++ ++R ED VGT Y+APE
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSM--RLTGNRLVRPGEEDNAAISEVGTIRYMAPE- 198
Query: 334 LMHGKVS--------DKIDVYSFGVVLLELL 356
++ G V+ ++D+Y+ G++ E+
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L LVSD+ GSL + L+ +V G+ ++A++ A L +LH E +P I H
Sbjct: 76 LWLVSDYHEHGSLFDYLN---RYTVTVEGM-IKLALSTASGLAHLHMEIVGTQGKPAIAH 131
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIW--GPTDSTHMIREDVVGTFGYIAPEYL------M 335
RD+KS NIL+ + ++D GLA+ TD+ + VGT Y+APE L
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 191
Query: 336 HGKVSDKIDVYSFGVVLLEL 355
H + + D+Y+ G+V E+
Sbjct: 192 HFESFKRADIYAMGLVFWEI 211
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA-GEQSVLPWGVRFE 261
+E+++ SL+ +I + V + + + +V + G L E + A L G E
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILL--SSDFQP-QLSDFGLAIWGPTDSTHMI 318
+ + AL Y HS+ V+H+D+K NIL +S P ++ DFGLA +D
Sbjct: 129 LMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--- 182
Query: 319 REDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAK 378
+ GT Y+APE + V+ K D++S GVV+ LL+G P +L+ + + +
Sbjct: 183 STNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241
Query: 379 PILKNGDTETL-LDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
P N E L P+ + +++ML + P+ RP+ QVL
Sbjct: 242 P---NYAVECRPLTPQAVD-----LLKQML-------TKDPERRPSAAQVL 277
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
+P + ++AV+I +AL +LHS+ S VIHRDVK SN+L+++ Q + DFG++ + D
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 314 STHMIREDV-VGTFGYIAPEY----LMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ +D+ G Y APE L S K D++S G+ +EL R P
Sbjct: 191 ----VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T ST+ + V T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYY 189
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ EL+ G +G + + +W K I + G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGS-----VIFQGTDHIDQWNKVIEQLGTPSA 244
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 245 EFMAALQPTVRNYVEN 260
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 45 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 102
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 103 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D + + D ++APE +
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
Query: 340 SDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEY 398
+ + DV+SFGV+L E+ S G P + +K E + LK G + +Y
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASP--YPGVKIDEEFCR----RLKEGTRMR------APDY 266
Query: 399 DNAQMQRMLLAANLCINQSPQLRPNMGQVLKLLRGATHATDWVDR 443
+M + +L C + P RP ++++ L A DR
Sbjct: 267 TTPEMYQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 173 KLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILV 232
KLV+ +C E K+ + + +E+ + ++ +I L+ + +L L+
Sbjct: 44 KLVAIKCIAKKALEGKEGSME---------NEIAVLHKIKHPNIVALDDIYESGGHLYLI 94
Query: 233 SDFLPKGSL-----EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
+ G L E+ + + S L + V +A+ YLH ++HRD+K
Sbjct: 95 MQLVSGGELFDRIVEKGFYTERDASRLIFQV--------LDAVKYLHD---LGIVHRDLK 143
Query: 288 SSNIL---LSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L L D + +SDFGL+ + + GT GY+APE L S +D
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 345 VYSFGVVLLELLSGRRPI 362
+S GV+ LL G P
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDI 180
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 238
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P++RP +++
Sbjct: 239 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 284 NLLKDDLHPS 293
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWG 310
++A IA+ + YL++ + +HRD+ + N +++ DF ++ DFG+ I+
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY- 180
Query: 311 PTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKN 366
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 ---ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 237
Query: 367 LKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQ 426
E ++K+ ++D ++ DN +R+ +C +P++RP +
Sbjct: 238 ----EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLE 280
Query: 427 VLKLLRGATHAT 438
++ LL+ H +
Sbjct: 281 IVNLLKDDLHPS 292
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESL-----H---GAGE- 250
+F E + + L+ ++ L GV +D L ++ + G L E L H G+ +
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 251 ----QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
+S L + IA + YL S V+H+D+ + N+L+ ++SD GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 307 AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GF 364
+ + + + ++APE +M+GK S D++S+GVVL E+ S G +P G+
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 234
Query: 365 KN 366
N
Sbjct: 235 SN 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDVVG 324
I L Y+HS V+HRD+K SN+L+++ ++ DFGLA I P + V
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 325 TFGYIAPEYLMHGKVSDK-IDVYSFGVVLLELLSGR 359
T Y APE +++ K K ID++S G +L E+LS R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 22/198 (11%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 54 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 112 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D ++ + D ++APE +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 227
Query: 340 SDKIDVYSFGVVLLELLS 357
+ + DV+SFGV+L E+ S
Sbjct: 228 TIQSDVWSFGVLLWEIFS 245
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V D++ G L H E+ L RF A IA AL YLHS +++RD+K
Sbjct: 114 LYFVLDYINGGEL--FYHLQRERCFLEPRARF-YAAEIASALGYLHSLN---IVYRDLKP 167
Query: 289 SNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSF 348
NILL S L+DFGL ++ GT Y+APE L +D +
Sbjct: 168 ENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225
Query: 349 GVVLLELLSGRRPIGFKN 366
G VL E+L G P +N
Sbjct: 226 GAVLYEMLYGLPPFYSRN 243
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP---QLSDFGLAIWGPTDSTHMIREDV 322
I+ AL YLH +IHRD+K NI+L Q ++ D G A D + E
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA--KELDQGELCTE-F 183
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y+APE L K + +D +SFG + E ++G RP
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 22/198 (11%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 91 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 149 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 204
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D ++ + D ++APE +
Sbjct: 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 264
Query: 340 SDKIDVYSFGVVLLELLS 357
+ + DV+SFGV+L E+ S
Sbjct: 265 TIQSDVWSFGVLLWEIFS 282
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP---QLSDFGLAIWGPTDSTHMIREDV 322
I+ AL YLH +IHRD+K NI+L Q ++ D G A D + E
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA--KELDQGELCTE-F 184
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
VGT Y+APE L K + +D +SFG + E ++G RP
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESLH--------------- 246
SE+ I S L Q ++I L G C +++++++ G L L
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 247 ---GAGEQSVLPWGVR--FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
G ++ P +R + +A+ + +L S+ IHRDV + N+LL++ ++
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 302 SDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
DFGLA DS ++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 203 SEVDITSSLEQ-KSITTLNGVCIEDNYLILVSDFLPKGSLEESL---------------H 246
SE+ I S L Q ++I L G C +++++++ G L L H
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
EQ L + +A+ + +L S+ IHRDV + N+LL++ ++ DFGL
Sbjct: 158 NPEEQ--LSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 212
Query: 307 AIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
A DS ++++ + ++APE + + + DV+S+G++L E+ S
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 74 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 128
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 185
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 186 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 25/150 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L L++ + GSL + L Q++ P + +AV+ A L +LH E +P I H
Sbjct: 81 LWLITHYHEHGSLYDFLQ---RQTLEP-HLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV-----VGTFGYIAPEYLMHGK 338
RD KS N+L+ S+ Q ++D GLA+ S ++ D+ VGT Y+APE L
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYL---DIGNNPRVGTKRYMAPEVLDEQI 193
Query: 339 VSDKI------DVYSFGVVLLELLSGRRPI 362
+D D+++FG+VL E+ RR I
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 173 KLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILV 232
KLV+ +C E K+ + + +E+ + ++ +I L+ + +L L+
Sbjct: 44 KLVAIKCIAKEALEGKEGSME---------NEIAVLHKIKHPNIVALDDIYESGGHLYLI 94
Query: 233 SDFLPKGSL-----EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
+ G L E+ + + S L + V +A+ YLH ++HRD+K
Sbjct: 95 MQLVSGGELFDRIVEKGFYTERDASRLIFQV--------LDAVKYLHD---LGIVHRDLK 143
Query: 288 SSNIL---LSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L L D + +SDFGL+ + + GT GY+APE L S +D
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 345 VYSFGVVLLELLSGRRPI 362
+S GV+ LL G P
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 173 KLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILV 232
KLV+ +C E K+ + + +E+ + ++ +I L+ + +L L+
Sbjct: 44 KLVAIKCIAKEALEGKEGSME---------NEIAVLHKIKHPNIVALDDIYESGGHLYLI 94
Query: 233 SDFLPKGSL-----EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
+ G L E+ + + S L + V +A+ YLH ++HRD+K
Sbjct: 95 MQLVSGGELFDRIVEKGFYTERDASRLIFQV--------LDAVKYLHD---LGIVHRDLK 143
Query: 288 SSNIL---LSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L L D + +SDFGL+ + + GT GY+APE L S +D
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 345 VYSFGVVLLELLSGRRPI 362
+S GV+ LL G P
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 185
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 242
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 243 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 173 KLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILV 232
KLV+ +C E K+ + + +E+ + ++ +I L+ + +L L+
Sbjct: 44 KLVAIKCIAKEALEGKEGSME---------NEIAVLHKIKHPNIVALDDIYESGGHLYLI 94
Query: 233 SDFLPKGSL-----EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
+ G L E+ + + S L + V +A+ YLH ++HRD+K
Sbjct: 95 MQLVSGGELFDRIVEKGFYTERDASRLIFQV--------LDAVKYLHD---LGIVHRDLK 143
Query: 288 SSNIL---LSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L L D + +SDFGL+ + + GT GY+APE L S +D
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 345 VYSFGVVLLELLSGRRPI 362
+S GV+ LL G P
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 RIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 77 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 131
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 188
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 189 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 43/257 (16%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-----GAG- 249
S D SE ++ + + L G C +D L+L+ ++ GSL L G G
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 250 ---------------EQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLS 294
++ L G A I++ + YL +E S ++HRD+ + NIL++
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMS--LVHRDLAARNILVA 184
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+ ++SDFGL+ + + + R ++A E L + + DV+SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 355 LLSGRRPIGFKNLKG--PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANL 412
+++ +G G PE L +LK G + P +E +M R++L
Sbjct: 245 IVT----LGGNPYPGIPPERLFN----LLKTG--HRMERPDNCSE----EMYRLMLQ--- 287
Query: 413 CINQSPQLRPNMGQVLK 429
C Q P RP + K
Sbjct: 288 CWKQEPDKRPVFADISK 304
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLP 255
++ +E ++ L+ I + G+C ++++ LV + G L + L +++++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 114
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
E+ ++ + YL +HRD+ + N+LL + ++SDFGL+ D
Sbjct: 115 -----ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE- 165
Query: 316 HMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPE 371
+ + G + + APE + + K S K DV+SFGV++ E S G++P ++ +KG E
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 222
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 72 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 126
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVM 183
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 184 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 54 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 112 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D + + D ++APE +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 340 SDKIDVYSFGVVLLELLS 357
+ + DV+SFGV+L E+ S
Sbjct: 228 TIQSDVWSFGVLLWEIFS 245
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I + L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 218 TLNGVCIEDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVA 265
L V N + L++ F P+ SLEE L A V+ + E +
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVT 188
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
Y APE ++ + +D++S GV++ E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 49 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 104
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 105 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A T S + + E + Y+APE L K D
Sbjct: 144 ENLLYTSK-RPNAILKLTDFGFA--KETTSHNSLTEPCYTPY-YVAPEVLGPEKYDKSCD 199
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 200 MWSLGVIMYILLCGYPPF 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 218 TLNGVCIEDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVA 265
L V N + L++ F P+ SLEE L A V+ + E +
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVT 188
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
Y APE ++ + +D++S GV++ E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL----EESLHGAGEQSVLPWGVR 259
E + + + ++ L G+C+ + LV+ +P G L E+ G Q +L W
Sbjct: 69 EAYVMAGVGSPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW--- 124
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
+ IA+ ++YL ++HRD+ + N+L+ S +++DFGLA D T
Sbjct: 125 ---CMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRP 361
+ ++A E ++ + + + DV+S+GV + EL++ G +P
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ + G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 200 DFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA---------- 248
DF+ E+++ L +I L G C YL L ++ P G+L + L +
Sbjct: 71 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 130
Query: 249 ---GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG 305
S L A +A ++YL + IHRD+ + NIL+ ++ +++DFG
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 187
Query: 306 LAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
L + + + +G ++A E L + + DV+S+GV+L E++S
Sbjct: 188 L-----SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L V +F+ G L H + RF A I AL +LH + +I+RD+K
Sbjct: 99 LFFVMEFVNGGDL--MFHIQKSRRFDEARARF-YAAEIISALMFLHD---KGIIYRDLKL 152
Query: 289 SNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSF 348
N+LL + +L+DFG+ G + + GT YIAPE L +D ++
Sbjct: 153 DNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210
Query: 349 GVVLLELLSGRRPIGFKN 366
GV+L E+L G P +N
Sbjct: 211 GVLLYEMLCGHAPFEAEN 228
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 200 DFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA---------- 248
DF+ E+++ L +I L G C YL L ++ P G+L + L +
Sbjct: 61 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 120
Query: 249 ---GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG 305
S L A +A ++YL + IHRD+ + NIL+ ++ +++DFG
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 177
Query: 306 LAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
L + + + +G ++A E L + + DV+S+GV+L E++S
Sbjct: 178 L-----SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + LV D + G L E + S
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCI 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP---QLSDFGLAIWGPTDSTHMIRE 320
I E++N+ H ++HRD+K N+LL+S + +L+DFGLAI D
Sbjct: 110 QQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-- 164
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 43/257 (16%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-----GAG- 249
S D SE ++ + + L G C +D L+L+ ++ GSL L G G
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 250 ---------------EQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLS 294
++ L G A I++ + YL ++HRD+ + NIL++
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+ ++SDFGL+ + + + R ++A E L + + DV+SFGV+L E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 355 LLSGRRPIGFKNLKG--PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANL 412
+++ +G G PE L +LK G + P +E +M R++L
Sbjct: 245 IVT----LGGNPYPGIPPERLFN----LLKTG--HRMERPDNCSE----EMYRLMLQ--- 287
Query: 413 CINQSPQLRPNMGQVLK 429
C Q P RP + K
Sbjct: 288 CWKQEPDKRPVFADISK 304
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + LV D + G L E + S
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCI 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPTDSTHMIRE 320
I EA+ + H V+HRD+K N+LL+S + +L+DFGLAI D
Sbjct: 110 QQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF-- 164
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 37/207 (17%)
Query: 181 QFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGS 240
+ + +E+ + S++S ++ E+ + L+ K+I G E+ ++ + + +P GS
Sbjct: 49 RIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105
Query: 241 LEESLHGAGEQSVLPWG--------VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL 292
L L WG + F I E L YLH ++HRD+K N+L
Sbjct: 106 LSALLRSK-------WGPLKDNEQTIGFYTK-QILEGLKYLHD---NQIVHRDIKGDNVL 154
Query: 293 LSS-DFQPQLSDFG----LAIWGPTDSTHMIREDVVGTFGYIAPEYLMHG--KVSDKIDV 345
+++ ++SDFG LA P T GT Y+APE + G D+
Sbjct: 155 INTYSGVLKISDFGTSKRLAGINPCTET------FTGTLQYMAPEIIDKGPRGYGKAADI 208
Query: 346 YSFGVVLLELLSGRRPIGFKNLKGPES 372
+S G ++E+ +G+ P F L P++
Sbjct: 209 WSLGCTIIEMATGKPP--FYELGEPQA 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 54 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ V E + +A+ + +L SR
Sbjct: 112 EFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D + + D ++APE +
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 340 SDKIDVYSFGVVLLELLS 357
+ + DV+SFGV+L E+ S
Sbjct: 228 TIQSDVWSFGVLLWEIFS 245
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 106
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 107 AQRF--FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L S+ IHRD+ + NILL+ ++ DFGLA DS ++++ +
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGD 385
++APE + + + + DV+S+G+ L EL S +G G K+ K ++K G
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSSPYPGMPVDSKFYK-MIKEGF 288
Query: 386 TETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
LS E+ A+M ++ C + P RP Q+++L+
Sbjct: 289 R------MLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 325
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH---GAGEQSVLPW 256
+ E+ I L +++ G E N L ++ G L + + G E P
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PD 105
Query: 257 GVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTH 316
RF + + YLH + HRD+K N+LL ++SDFGLA ++
Sbjct: 106 AQRF--FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 317 MIREDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRP 361
+ + GT Y+APE L + ++ +DV+S G+VL +L+G P
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 175 VSSRC------RQFSYE--ELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIED 226
V RC +QF+ + ++ + TS + D E I L+ I L D
Sbjct: 41 VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD 100
Query: 227 NYLILVSDFLPKGSL-EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
L +V +F+ L E + A V V I EAL Y H +IHRD
Sbjct: 101 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRD 157
Query: 286 VKSSNILLSS--DFQP-QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
VK +LL+S + P +L FG+AI + ++ VGT ++APE +
Sbjct: 158 VKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAPEVVKREPYGKP 215
Query: 343 IDVYSFGVVLLELLSGRRPI 362
+DV+ GV+L LLSG P
Sbjct: 216 VDVWGCGVILFILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 175 VSSRC------RQFSYE--ELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIED 226
V RC +QF+ + ++ + TS + D E I L+ I L D
Sbjct: 39 VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD 98
Query: 227 NYLILVSDFLPKGSL-EESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
L +V +F+ L E + A V V I EAL Y H +IHRD
Sbjct: 99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRD 155
Query: 286 VKSSNILLSS--DFQP-QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
VK +LL+S + P +L FG+AI + ++ VGT ++APE +
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAPEVVKREPYGKP 213
Query: 343 IDVYSFGVVLLELLSGRRPI 362
+DV+ GV+L LLSG P
Sbjct: 214 VDVWGCGVILFILLSGCLPF 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ + KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV---- 253
+D SE+++ + + K+I L G C +D L ++ ++ KG+L E L +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 254 ---------LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDF 304
+ + +A + YL S+ IHRD+ + N+L++ + +++DF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 305 GLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
GLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 202 GLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 31/180 (17%)
Query: 199 NDFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
+D SE+++ + + K+I L G C +D L ++ + KG+L E L ++ P G
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL-----RARRPPG 139
Query: 258 VRFEVAV------------------AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+ + + +A + YL S+ IHRD+ + N+L++ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVM 196
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+++DFGLA ++ ++ G ++APE L + + DV+SFGV++ E+ +
Sbjct: 197 KIADFGLA--RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + LV D + G L E + S
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCI 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPTDSTHMIRE 320
I E++N+ H ++HRD+K N+LL+S + +L+DFGLAI D
Sbjct: 110 QQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-- 164
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 261 EVAVAIAE---ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHM 317
EV + + E AL +LH +I+RD+K NILL S+ L+DFGL+ D T
Sbjct: 160 EVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216
Query: 318 IREDVVGTFGYIAPEYLMHGKVS-DK-IDVYSFGVVLLELLSGRRPI 362
D GT Y+AP+ + G DK +D +S GV++ ELL+G P
Sbjct: 217 AY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLP 237
++ Y + +A Q SEV++ L+ +I I+ + L +V ++
Sbjct: 37 KELDYGSMTEAEKQM------LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 238 KGSLEESL-HGAGEQSVLPWGVRFEVAVAIAEALNYLH--SECSRPVIHRDVKSSNILLS 294
G L + G E+ L V + AL H S+ V+HRD+K +N+ L
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+L DFGLA D++ + VGT Y++PE + ++K D++S G +L E
Sbjct: 151 GKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 355 L 355
L
Sbjct: 209 L 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 25/150 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L L++ + GSL + L +V + ++IA L +LH E +P I H
Sbjct: 81 LWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV-----VGTFGYIAPEYLMHGK 338
RD+KS NIL+ + Q ++D GLA+ + + DV VGT Y+APE L
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL---DVGNNPRVGTKRYMAPEVLDETI 193
Query: 339 VSD------KIDVYSFGVVLLELLSGRRPI 362
D ++D+++FG+VL E+ RR +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 203 SEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQ---------- 251
SE+ + + L ++I L G C + L+ ++ G L L E+
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 252 ----------SVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQL 301
+VL + A +A+ + +L + +HRD+ + N+L++ ++
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKI 213
Query: 302 SDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
DFGLA +DS +++R + ++APE L G + K DV+S+G++L E+ S
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 37/207 (17%)
Query: 181 QFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGS 240
+ + +E+ + S++S ++ E+ + L+ K+I G E+ ++ + + +P GS
Sbjct: 35 RIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 91
Query: 241 LEESLHGAGEQSVLPWG--------VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL 292
L L WG + F I E L YLH ++HRD+K N+L
Sbjct: 92 LSALLRSK-------WGPLKDNEQTIGFYTK-QILEGLKYLHD---NQIVHRDIKGDNVL 140
Query: 293 LSS-DFQPQLSDFG----LAIWGPTDSTHMIREDVVGTFGYIAPEYLMHG--KVSDKIDV 345
+++ ++SDFG LA P T GT Y+APE + G D+
Sbjct: 141 INTYSGVLKISDFGTSKRLAGINPCTET------FTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 346 YSFGVVLLELLSGRRPIGFKNLKGPES 372
+S G ++E+ +G+ P F L P++
Sbjct: 195 WSLGCTIIEMATGKPP--FYELGEPQA 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 189
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 190 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 246 MWSLGVIMYILLCGYPPF 263
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 150
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 151 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 207 MWSLGVIMYILLCGYPPF 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 151
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 152 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 208 MWSLGVIMYILLCGYPPF 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 25/150 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L L++ + GSL + L +V + ++IA L +LH E +P I H
Sbjct: 81 LWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV-----VGTFGYIAPEYLMHGK 338
RD+KS NIL+ + Q ++D GLA+ + + DV VGT Y+APE L
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL---DVGNNPRVGTKRYMAPEVLDETI 193
Query: 339 VSD------KIDVYSFGVVLLELLSGRRPI 362
D ++D+++FG+VL E+ RR +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 32/182 (17%)
Query: 204 EVDITSSLE-QKSITTLNGVCIEDNY--LILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
E+ I + L ++I L V DN + LV D++ E LH ++L +
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQ 112
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-----IWGPTDST 315
V + + + YLHS ++HRD+K SNILL+++ +++DFGL+ I T++
Sbjct: 113 YVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 316 HM--------------IREDVVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGRR 360
+ I D V T Y APE L+ K + ID++S G +L E+L G +
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-K 228
Query: 361 PI 362
PI
Sbjct: 229 PI 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 210 SLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEA 269
SL +I V + +L +V ++ G L E + AG S F+ ++
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
++Y H+ V HRD+K N LL P+L + + H + VGT YI
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFG-YSKSSVLHSQPKSTVGTPAYI 183
Query: 330 APEYLMHGKVSDKI-DVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPIL 381
APE L+ + K+ DV+S GV L +L G P F++ + P++ K IL
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNFRKTIHRIL 234
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 195
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 196 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 251
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 252 MWSLGVIMYILLCGYPPF 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L S+ IHRD+ + NILL+ ++ DFGLA DS ++++ +
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGD 385
++APE + + + + DV+S+G+ L EL S +G G K+ K ++K G
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSSPYPGMPVDSKFYK-MIKEGF 281
Query: 386 TETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
LS E+ A+M ++ C + P RP Q+++L+
Sbjct: 282 R------MLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 318
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 149
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 150 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 206 MWSLGVIMYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 143
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 144 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 200 MWSLGVIMYILLCGYPPF 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T+ + V T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ EL+ G +G + + +W K I + G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVK-----GCVIFQGTDHIDQWNKVIEQLGTPSA 246
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 247 EFMAALQPTVRNYVEN 262
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 146 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 202 MWSLGVIMYILLCGYPPF 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLP 237
++ Y + +A Q SEV++ L+ +I I+ + L +V ++
Sbjct: 37 KELDYGSMTEAEKQM------LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 238 KGSLEESL-HGAGEQSVLPWGVRFEVAVAIAEALNYLH--SECSRPVIHRDVKSSNILLS 294
G L + G E+ L V + AL H S+ V+HRD+K +N+ L
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+L DFGLA D++ + VGT Y++PE + ++K D++S G +L E
Sbjct: 151 GKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 355 L 355
L
Sbjct: 209 L 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 28/151 (18%)
Query: 226 DNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEALN 271
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLK 168
Query: 272 YLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAP 331
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y AP
Sbjct: 169 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAP 220
Query: 332 EYL---MHGKVSDKIDVYSFGVVLLELLSGR 359
E + MH ++ +D++S G ++ ELL+GR
Sbjct: 221 EIMLNWMHYNMT--VDIWSVGCIMAELLTGR 249
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 145
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 146 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 202 MWSLGVIMYILLCGYPPF 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HR++ + N +++ DF ++ DFG+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDI 180
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 238
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P +RP +++
Sbjct: 239 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIV 283
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 284 NLLKDDLHPS 293
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 144
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 145 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 201 MWSLGVIMYILLCGYPPF 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV- 258
+F +E + + L GV + ++V + + G L+ L ++ G
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 259 ------RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ + +HR++ + N +++ DF ++ DFG+
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDI 181
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI-GFKNLK 368
T R+ G ++APE L G + D++SFGVVL E+ S +P G N
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 239
Query: 369 GPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
E ++K+ ++D ++ DN +R+ +C +P +RP +++
Sbjct: 240 --EQVLKF------------VMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIV 284
Query: 429 KLLRGATHAT 438
LL+ H +
Sbjct: 285 NLLKDDLHPS 294
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLHS---INIAHRDVKP 159
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 160 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 345 VYSFGVVLLELLSGRRPI 362
++S GV++ LL G P
Sbjct: 216 MWSLGVIMYILLCGYPPF 233
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L S+ IHRD+ + NILL+ ++ DFGLA DS ++++ +
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGD 385
++APE + + + + DV+S+G+ L EL S +G G K+ K ++K G
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSSPYPGMPVDSKFYK-MIKEGF 265
Query: 386 TETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
LS E+ A+M ++ C + P RP Q+++L+
Sbjct: 266 R------MLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 302
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 25/150 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L L++ + GSL + L +V + ++IA L +LH E +P I H
Sbjct: 110 LWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV-----VGTFGYIAPEYLMHGK 338
RD+KS NIL+ + Q ++D GLA+ + + DV VGT Y+APE L
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL---DVGNNPRVGTKRYMAPEVLDETI 222
Query: 339 VSD------KIDVYSFGVVLLELLSGRRPI 362
D ++D+++FG+VL E+ RR +
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 222 VCIEDNY---------LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNY 272
VCI D Y L+++ + + G L + G+Q+ E+ I A+ +
Sbjct: 66 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQF 124
Query: 273 LHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
LHS + HRDVK N+L +S D +L+DFG A ++T + T Y+
Sbjct: 125 LHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYV 177
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
APE L K D++S GV++ LL G P
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L S+ IHRD+ + NILL+ ++ DFGLA DS ++++ +
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGD 385
++APE + + + + DV+S+G+ L EL S +G G K+ K ++K G
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSSPYPGMPVDSKFYK-MIKEGF 283
Query: 386 TETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
LS E+ A+M ++ C + P RP Q+++L+
Sbjct: 284 R------MLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 320
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L S+ IHRD+ + NILL+ ++ DFGLA DS ++++ +
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGD 385
++APE + + + + DV+S+G+ L EL S +G G K+ K ++K G
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSSPYPGMPVDSKFYK-MIKEGF 288
Query: 386 TETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLKLL 431
LS E+ A+M ++ C + P RP Q+++L+
Sbjct: 289 R------MLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 325
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE--DNYLILVSDFLP 237
++ Y + +A Q SEV++ L+ +I I+ + L +V ++
Sbjct: 37 KELDYGSMTEAEKQM------LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 238 KGSLEESL-HGAGEQSVLPWGVRFEVAVAIAEALNYLH--SECSRPVIHRDVKSSNILLS 294
G L + G E+ L V + AL H S+ V+HRD+K +N+ L
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
Query: 295 SDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE 354
+L DFGLA D ++ VGT Y++PE + ++K D++S G +L E
Sbjct: 151 GKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 355 LLS 357
L +
Sbjct: 209 LCA 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 200 DFSSEVDITSSL-EQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGA---------- 248
DF+ E+++ L +I L G C YL L ++ P G+L + L +
Sbjct: 68 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 127
Query: 249 ---GEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG 305
S L A +A ++YL + IHR++ + NIL+ ++ +++DFG
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFG 184
Query: 306 LAIWGPTDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
L + + + +G ++A E L + + DV+S+GV+L E++S
Sbjct: 185 L-----SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 145
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATRWYRA 197
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK---GSLEESLHGAGEQSVLPWGVRF 260
E+ + L +I +L V + L LV +F+ K L+E+ G + + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWG-PTDS-THM 317
VA H R ++HRD+K N+L++SD +L+DFGLA +G P S TH
Sbjct: 129 LRGVA--------HCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH- 178
Query: 318 IREDVVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
+VV T Y AP+ LM K S +D++S G + E+++G+
Sbjct: 179 ---EVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 145
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATRWYRA 197
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSV------ 253
DF E + + + +I L GVC + L+ +++ G L E L +V
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 254 ---------------LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ 298
L + +A +A + YL R +HRD+ + N L+ +
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMV 212
Query: 299 PQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELL 356
+++DFGL+ I+ D D + ++ PE + + + + + DV+++GVVL E+
Sbjct: 213 VKIADFGLSRNIYS-ADYYKADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 357 S 357
S
Sbjct: 271 S 271
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 145
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT-----GYVATRWYRA 197
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK---GSLEESLHGAGEQSVLPWGVRF 260
E+ + L +I +L V + L LV +F+ K L+E+ G + + + +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWG-PTDS-THM 317
VA H R ++HRD+K N+L++SD +L+DFGLA +G P S TH
Sbjct: 129 LRGVA--------HCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 318 IREDVVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
V T Y AP+ LM K S +D++S G + E+++G+
Sbjct: 180 -----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 222 VCIEDNY---------LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNY 272
VCI D Y L+++ + + G L + G+Q+ E+ I A+ +
Sbjct: 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQF 143
Query: 273 LHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
LHS + HRDVK N+L +S D +L+DFG A ++T + T Y+
Sbjct: 144 LHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYV 196
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
APE L K D++S GV++ LL G P
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWG------VRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQILRGL 134
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 186
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L++ HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 56 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFE--------------VAVAIAEALNYLHSECSR 279
+F G+L L + V P+ E + +A+ + +L SR
Sbjct: 114 EFCKFGNLSTYLRSKRNEFV-PYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 169
Query: 280 PVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKV 339
IHRD+ + NILLS ++ DFGLA D ++ + D ++APE +
Sbjct: 170 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 229
Query: 340 SDKIDVYSFGVVLLELLS 357
+ + DV+SFGV+L E+ S
Sbjct: 230 TIQSDVWSFGVLLWEIFS 247
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 218 TLNGVCIEDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVA 265
L V N + L++ F P+ SLEE L A V+ + E +
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVT 188
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
Y APE ++ + +D++S G ++ E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 195 SSAWNDFS--SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS 252
S A+ D S +E+ + ++ ++I TL + + LV + G L +
Sbjct: 45 SPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR-------- 96
Query: 253 VLPWGVRFE-----VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDF 304
+L GV E V + A+ YLH ++HRD+K N+L + + + ++DF
Sbjct: 97 ILERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDF 153
Query: 305 GLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GL+ + I GT GY+APE L S +D +S GV+ LL G P
Sbjct: 154 GLS----KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +++ L VC + LV +F+ L++ + P G+ ++V
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-------ELFPNGLDYQVV 126
Query: 264 ----VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHM 317
I + + HS +IHRD+K NIL+S +L DFG A + P +
Sbjct: 127 QKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---- 179
Query: 318 IREDVVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSG 358
+ +D V T Y APE L+ K +DV++ G ++ E+ G
Sbjct: 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 143
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRA 195
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 143
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRA 195
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + ++ A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPLIKSYL 112
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 167
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 149
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 150 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRA 201
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 176 SSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVS 233
++ CR + + LK+ + S SE+ I + ++ L G C + L+++
Sbjct: 55 TATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 112
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFEV-------------AVAIAEALNYLHSECSRP 280
+F G+L L + V P+ ++ + +A+ + +L SR
Sbjct: 113 EFCKFGNLSTYLRSKRNEFV-PYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 168
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVS 340
IHRD+ + NILLS ++ DFGLA D + + D ++APE + +
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 341 DKIDVYSFGVVLLELLS 357
+ DV+SFGV+L E+ S
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 261 EVAVAIAEALN---YLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDS 314
+ AV + + L+ YLH ++HRD+K N+LL S D ++ DFGL+
Sbjct: 105 DAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIG 363
R +GT YIAPE ++ K +K DV+S GV+L LL G P G
Sbjct: 162 KMKER---LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFG 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 189 QATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLH-- 246
Q ++ +AW + + V +++++KS L + ++ G+L + +H
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKST------------LFIQMEYCENGTLYDLIHSE 109
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL 306
+Q W + I EAL+Y+HS+ +IHRD+K NI + ++ DFGL
Sbjct: 110 NLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162
Query: 307 A--IWGPTDSTHMIREDV----------VGTFGYIAPEYL-MHGKVSDKIDVYSFGVVLL 353
A + D + +++ +GT Y+A E L G ++KID+YS G++
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 354 ELL 356
E++
Sbjct: 223 EMI 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 140
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 192
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 145
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 197
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 144
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 196
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 150
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 202
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 150
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 202
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 144
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 196
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 150
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 202
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 149
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 150 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 201
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 140
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 192
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + L+ D + G L E + S + +
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS------EADAS 124
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP---QLSDFGLAIWGPTDSTHMIRE 320
I + L + V+HRD+K N+LL+S + +L+DFGLAI +
Sbjct: 125 HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWF 182
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 143
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 195
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 137
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 138 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 189
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 113
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 168
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 169 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 111
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 166
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 148
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 149 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 200
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 144
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 196
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ S L ++ L+ +DN ++++ +F+ G L E + A E + + E
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYM 155
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS--DFGL-AIWGPTDSTHMIRE 320
+ + L ++H +H D+K NI+ ++ +L DFGL A P S +
Sbjct: 156 RQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV--- 209
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
GT + APE V D++S GV+ LLSG P G +N
Sbjct: 210 -TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 140
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 192
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 112
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 167
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 111
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 166
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 110
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 165
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 143
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 195
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GXVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 116
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 171
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 172 V-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 110
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 165
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L++V + L G L + G+Q+ E+ +I EA+ YLHS + HRDVK
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREAS-EIXKSIGEAIQYLHS---INIAHRDVKP 189
Query: 289 SNILLSSDFQP----QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKID 344
N+L +S +P +L+DFG A ++H T Y+APE L K D
Sbjct: 190 ENLLYTSK-RPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
Query: 345 VYSFGVVLLELLSGRRPI 362
+S GV+ LL G P
Sbjct: 246 XWSLGVIXYILLCGYPPF 263
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 111
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 166
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 110
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 165
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 113
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 168
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 169 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 157
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 158 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 209
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 161
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 162 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 213
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 157
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 158 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 209
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 112
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 167
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 158
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 210
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 116
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 171
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 172 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 218 TLNGVCIEDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVA 265
L V N + L++ F P+ SLEE L A V+ + E +
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVT 188
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
Y APE ++ + +D++S G ++ E++ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 158
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 210
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 135
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 136 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 187
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 135
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 136 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 187
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 110
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 165
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDV 322
I EA+ YLH ++HRD+K N+L ++ D +++DFGL+ ++ + V
Sbjct: 157 ILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS---KIVEHQVLMKTV 210
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY APE L ++D++S G++ LL G P
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 134
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 186
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 136
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 137 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 188
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 134
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRA 186
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 140
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----GYVATRWYRA 192
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE-ESLHGAGEQSVLPWGVRFEV 262
E+ + L +I L V +N L LV +FL S++ + A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRED 321
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX--HE 166
Query: 322 VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
VV T Y APE L+ K S +D++S G + E+++ R
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ S L ++ L+ +DN ++++ +F+ G L E + A E + + E
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYM 261
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLS--DFGL-AIWGPTDSTHMIRE 320
+ + L ++H +H D+K NI+ ++ +L DFGL A P S +
Sbjct: 262 RQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV--- 315
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
GT + APE V D++S GV+ LLSG P G +N
Sbjct: 316 -TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 144
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----GYVATRWYRA 196
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE-ESLHGAGEQSVLPWGVRFEV 262
E+ + L +I L V +N L LV +FL S++ + A + +P +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRED 321
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX--HE 164
Query: 322 VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
VV T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 16/104 (15%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDV- 322
I EAL+Y+HS+ +IHRD+K NI + ++ DFGLA + D + +++
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 323 ---------VGTFGYIAPEYL-MHGKVSDKIDVYSFGVVLLELL 356
+GT Y+A E L G ++KID+YS G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV +FL + + A + +P +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KDFMDASALTGIPLPLIKSYL 109
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 164
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E D+ + +++ IT L+ ++NYL LV ++ G L L GE+ + RF
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARF 166
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
+A I A++ +H +HRD+K NILL +L+DFG + D T +R
Sbjct: 167 YLA-EIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT--VRS 220
Query: 321 DV-VGTFGYIAPEYL-------MHGKVSDKIDVYSFGVVLLELLSGRRPI 362
V VGT Y++PE L G + D ++ GV E+ G+ P
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 223 CIEDNYLI-LVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVAIAEA 269
C+ +I L++ F P+ SLEE L A V+ + E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYYR 192
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A + +L S R IHRD+ + NILLS + ++ DFGLA + ++ + D
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + S K DV+S+GV+L E+ S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 223 CIEDNYLI-LVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVAIAEA 269
C+ +I L++ F P+ SLEE L A V+ + E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA---RTAGTSFMMTPYVVTRYYR 192
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA TD V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDE---MAGFVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 38/260 (14%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 85 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 138
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 139 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 193
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 349 GVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLL 408
G +L + G+ P F+ + I + ++DP E+ + + +
Sbjct: 254 GCILYYMTYGKTP--FQQI------------INQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 409 AANLCINQSPQLRPNMGQVL 428
C+ + P+ R ++ ++L
Sbjct: 300 VLKCCLKRDPKQRISIPELL 319
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 261 EVAVAIAEALN---YLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDS 314
+ AV + + L+ YLH ++HRD+K N+LL S D ++ DFGL+
Sbjct: 122 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIG 363
R +GT YIAPE ++ K +K DV+S GV+L LL G P G
Sbjct: 179 KMKER---LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFG 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA TD V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDE---MAGFVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE-ESLHGAGEQSVLPWGVRFEV 262
E+ + L +I L V +N L LV +FL S++ + A + +P +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRED 321
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HE 165
Query: 322 VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
VV T Y APE L+ K S +D++S G + E+++ R
Sbjct: 166 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLE-ESLHGAGEQSVLPWGVRFEV 262
E+ + L +I L V +N L LV +FL S++ + A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRED 321
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HE 166
Query: 322 VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
VV T Y APE L+ K S +D++S G + E+++ R
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 161
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA TD V T Y A
Sbjct: 162 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDE---MXGYVATRWYRA 213
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMVPFVVTRYY 193
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 192
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA ++ M+ +VV + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPEVVTRY-Y 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSG 358
APE ++ + +D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 172 LKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTL-NGVCIEDNYLI 230
+K++S R +F+ ++A + +E++I L I + N ED Y++
Sbjct: 40 IKIISKR--KFAIGSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 92
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L + + G L + + G + F + A+ YLH +IHRD+K N
Sbjct: 93 L--ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAVQYLHE---NGIIHRDLKPEN 144
Query: 291 ILLSS---DFQPQLSDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLMH---GKVSDKI 343
+LLSS D +++DFG + I G T + + GT Y+APE L+ + +
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 200
Query: 344 DVYSFGVVLLELLSGRRPI 362
D +S GV+L LSG P
Sbjct: 201 DCWSLGVILFICLSGYPPF 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK--GSLEESLHGAGEQSVLPWGVRFE 261
E+ + L+ K+I L+ V D L LV +F + +S +G + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----S 105
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRE 320
+ + L + HS R V+HRD+K N+L++ + + +L+DFGLA +G +
Sbjct: 106 FLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE- 161
Query: 321 DVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRPI 362
V T Y P+ L K+ S ID++S G + EL + RP+
Sbjct: 162 --VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 134
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA TD V T Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDE---MAGFVATRWYRA 186
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D ++ + D
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 172 LKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTL-NGVCIEDNYLI 230
+K++S R +F+ ++A + +E++I L I + N ED Y++
Sbjct: 39 IKIISKR--KFAIGSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 91
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L + + G L + + G + F + A+ YLH +IHRD+K N
Sbjct: 92 L--ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAVQYLHE---NGIIHRDLKPEN 143
Query: 291 ILLSS---DFQPQLSDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLMH---GKVSDKI 343
+LLSS D +++DFG + I G T + + GT Y+APE L+ + +
Sbjct: 144 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 199
Query: 344 DVYSFGVVLLELLSGRRPI 362
D +S GV+L LSG P
Sbjct: 200 DCWSLGVILFICLSGYPPF 218
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D ++ + D
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 172 LKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTL-NGVCIEDNYLI 230
+K++S R +F+ ++A + +E++I L I + N ED Y++
Sbjct: 40 IKIISKR--KFAIGSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 92
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L + + G L + + G + F + A+ YLH +IHRD+K N
Sbjct: 93 L--ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAVQYLHE---NGIIHRDLKPEN 144
Query: 291 ILLSS---DFQPQLSDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLMH---GKVSDKI 343
+LLSS D +++DFG + I G T + + GT Y+APE L+ + +
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 200
Query: 344 DVYSFGVVLLELLSGRRPI 362
D +S GV+L LSG P
Sbjct: 201 DCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 172 LKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTL-NGVCIEDNYLI 230
+K++S R +F+ ++A + +E++I L I + N ED Y++
Sbjct: 40 IKIISKR--KFAIGSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 92
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L + + G L + + G + F + A+ YLH +IHRD+K N
Sbjct: 93 L--ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAVQYLHE---NGIIHRDLKPEN 144
Query: 291 ILLSS---DFQPQLSDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLMH---GKVSDKI 343
+LLSS D +++DFG + I G T + + GT Y+APE L+ + +
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 200
Query: 344 DVYSFGVVLLELLSGRRPI 362
D +S GV+L LSG P
Sbjct: 201 DCWSLGVILFICLSGYPPF 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 85 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 138
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 139 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 193
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 349 GVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLL 408
G +L + G+ P + + I + ++DP E+ + + +
Sbjct: 254 GCILYYMTYGKTP--------------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 409 AANLCINQSPQLRPNMGQVL 428
C+ + P+ R ++ ++L
Sbjct: 300 VLKCCLKRDPKQRISIPELL 319
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 200 DFSSEVDITSSLEQKSITTL-NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+ +E++I L I + N ED Y++L + + G L + + G +
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL--ELMEGGELFDKVVGNKRLKEATCKL 243
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLA-IWGPTDS 314
F + A+ YLH +IHRD+K N+LLSS D +++DFG + I G T
Sbjct: 244 YF---YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 296
Query: 315 THMIREDVVGTFGYIAPEYLMH---GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + GT Y+APE L+ + +D +S GV+L LSG P
Sbjct: 297 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ D+GLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 172 LKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTL-NGVCIEDNYLI 230
+K++S R +F+ ++A + +E++I L I + N ED Y++
Sbjct: 46 IKIISKR--KFAIGSAREADPAL-----NVETEIEILKKLNHPCIIKIKNFFDAEDYYIV 98
Query: 231 LVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSN 290
L + + G L + + G + F + A+ YLH +IHRD+K N
Sbjct: 99 L--ELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAVQYLHE---NGIIHRDLKPEN 150
Query: 291 ILLSS---DFQPQLSDFGLA-IWGPTDSTHMIREDVVGTFGYIAPEYLMH---GKVSDKI 343
+LLSS D +++DFG + I G T + + GT Y+APE L+ + +
Sbjct: 151 VLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAV 206
Query: 344 DVYSFGVVLLELLSGRRPI 362
D +S GV+L LSG P
Sbjct: 207 DCWSLGVILFICLSGYPPF 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 223 CI-EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVAIAEA 269
C+ N + L++ F P+ +LEE L A V+ + E + +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTAGTSFMMTPYVVTRYYR 192
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG----D 385
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCPE 247
Query: 386 TETLLDPKLSNEYDN 400
L P + N +N
Sbjct: 248 FMKKLQPTVRNYVEN 262
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 283 HRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK 342
HRDVK NIL+S+D L DFG+A TD + VGT Y APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA-SATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 343 IDVYSFGVVLLELLSGRRP 361
D+Y+ VL E L+G P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D ++ + D
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 158
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGLA TD V T Y A
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDE---MXGXVATRWYRA 210
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 200 DFSSEVDITSSLEQKSITTL-NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
+ +E++I L I + N ED Y++L + + G L + + G +
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL--ELMEGGELFDKVVGNKRLKEATCKL 257
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLA-IWGPTDS 314
F + A+ YLH +IHRD+K N+LLSS D +++DFG + I G T
Sbjct: 258 YF---YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 310
Query: 315 THMIREDVVGTFGYIAPEYLMH---GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + GT Y+APE L+ + +D +S GV+L LSG P
Sbjct: 311 ---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D ++ + D
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 223 CI-EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVAIAEA 269
C+ N + L++ F P+ +LEE L A V+ + E + +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 131
Query: 270 LNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYI 329
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 132 IKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTAGTSFMMTPYVVTRYYR 185
Query: 330 APEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG----D 385
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G +
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCPE 240
Query: 386 TETLLDPKLSNEYDN 400
L P + N +N
Sbjct: 241 FMKKLQPTVRNYVEN 255
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E I L+ +I L+ E+ + L+ D + G L E + S
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCI 116
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPTDSTHMIRE 320
I EA+ + H V+HR++K N+LL+S + +L+DFGLAI +
Sbjct: 117 QQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWF 171
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT GY++PE L +D+++ GV+L LL G P
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 116
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 117 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 172
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 117
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 118 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 173
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 174 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 55 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 111
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 112 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 167
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 227 NYLILVSDFLPKGSLEE--------SLHGAGEQSVLPWGVRFE----VAVAIAEALNYLH 274
N + L++ F P+ +LEE L A V+ + E + + + +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 275 SECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYL 334
S +IHRD+K SNI++ SD ++ DFGLA T T + V T Y APE +
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 335 MHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG----DTETLL 390
+ + +D++S G ++ E++ R I F G + + +W K I + G + L
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 391 DPKLSNEYDN 400
P + N +N
Sbjct: 253 QPTVRNYVEN 262
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L+ ++I L V +N L LV +F+ L++ + + P G+ +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNT-PRGLELNLV 110
Query: 264 V----AIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMI 318
+ + L + H ++HRD+K N+L++ Q +L DFGLA +G +T
Sbjct: 111 KYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--F 165
Query: 319 REDVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGR 359
+VV T Y AP+ LM + S ID++S G +L E+++G+
Sbjct: 166 SSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L+ ++ L V L LV ++ L E Q +P + +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSIT 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIRED 321
+A+N+ H IHRDVK NIL++ +L DFG A + GP+D +D
Sbjct: 109 WQTLQAVNFCHKHNC---IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY----DD 161
Query: 322 VVGTFGYIAPEYLM-HGKVSDKIDVYSFGVVLLELLSG 358
V T Y +PE L+ + +DV++ G V ELLSG
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 229
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 284
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 285 EFMKKLQPTVRNYVEN 300
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 114
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 170
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 114
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 170
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 38 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 91
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 92 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 146
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 349 GVVLLELLSGRRP 361
G +L + G+ P
Sbjct: 207 GCILYYMTYGKTP 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 142
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 143 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 198
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLI 119
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST+
Sbjct: 120 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKAS 175
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 180 RQFSYEELKQATSQFSSAWNDFSSEVDITSSL-EQKSITTLNGVCIE-DNYLILVSDFLP 237
R + + LK+ + S SE+ I + ++ L G C + L+++ +F
Sbjct: 58 RTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 238 KGSLEESLHGAGEQSVLPWGVRFE----------VAVAIAEALNYLHSECSRPVIHRDVK 287
G+L L + V P+ ++ + +A+ + +L SR IHRD+
Sbjct: 116 FGNLSTYLRSKRNEFV-PYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLA 171
Query: 288 SSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYS 347
+ NILLS ++ DFGLA D ++ + D ++APE + + + DV+S
Sbjct: 172 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 231
Query: 348 FGVVLLELLS 357
FGV+L E+ S
Sbjct: 232 FGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D ++ + D
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 57 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 110
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 111 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 165
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 349 GVVLLELLSGRRP 361
G +L + G+ P
Sbjct: 226 GCILYYMTYGKTP 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 138 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 187
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRTWT-------LCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 41 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 94
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 95 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 149
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 349 GVVLLELLSGRRP 361
G +L + G+ P
Sbjct: 210 GCILYYMTYGKTP 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 155
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + + GT Y+APE ++ + +D +
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRVKGRTWT-------LCGTPEYLAPEIILSKGYNKAVDWW 208
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 209 ALGVLIYEMAAGYPPF 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 246
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 247 EFMKKLQPTVRNYVEN 262
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLP 255
S F E + I L GV I +N + ++ + G L L + L
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLD 489
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST
Sbjct: 490 LASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDST 545
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
+ ++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 137 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 186
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 246
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 247 EFMKKLQPTVRNYVEN 262
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + E V T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMEPEVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
APE ++ + +D++S G ++ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 229
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 284
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 285 EFMKKLQPTVRNYVEN 300
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 192
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 247
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 248 EFMKKLQPTVRNYVEN 263
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 156 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 205
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 206 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTD 313
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA ++
Sbjct: 137 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX 187
Query: 314 STHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 188 XSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 136 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 185
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 186 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 199 NDFSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSV 253
+ F +E I ++ +L G+C+ + ++V ++ G L + H + +
Sbjct: 68 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 127
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTD 313
+ +G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 128 IGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYD 177
Query: 314 STHMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 192
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 247
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 248 EFMKKLQPTVRNYVEN 263
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 135 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 184
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 185 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 190
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 245
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 246 EFMKKLQPTVRNYVEN 261
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 246
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 247 EFMKKLQPTVRNYVEN 262
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 138 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 187
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 246
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 247 EFMKKLQPTVRNYVEN 262
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 133 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 182
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPAFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
+G++ +A+ + YL S+ +HRD+ + N +L F +++DFGLA D
Sbjct: 157 FGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKE 206
Query: 316 HMIREDVVGT---FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
+ + G ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 207 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 37 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 90
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 91 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 145
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VGT Y+ PE + S + DV+S
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 349 GVVLLELLSGRRP 361
G +L + G+ P
Sbjct: 206 GCILYYMTYGKTP 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 185
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 240
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 241 EFMKKLQPTVRNYVEN 256
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+A+ + +L SR IHRD+ + NILLS ++ DFGLA D + + D
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 326 FGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
++APE + + + DV+SFGV+L E+ S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ L Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T
Sbjct: 132 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVAT 183
Query: 326 FGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
Y APE +++ + +D++S G ++ ELL G+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 184
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 239
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 240 EFMKKLQPTVRNYVEN 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 162
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 216 ALGVLIYEMAAGYPPF 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 185
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG---- 384
APE ++ + +D++S G ++ E++ R I F G + + +W K I + G
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILF---PGRDYIDQWNKVIEQLGTPCP 240
Query: 385 DTETLLDPKLSNEYDN 400
+ L P + N +N
Sbjct: 241 EFMKKLQPTVRNYVEN 256
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPTDSTHMIREDV 322
+ L Y+HS VIHRD+K SN+L++ + + ++ DFG+A P + + + E
Sbjct: 168 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE-Y 223
Query: 323 VGTFGYIAPEYLMH-GKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
V T Y APE ++ + + ID++S G + E+L+ R+ KN
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA +
Sbjct: 139 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 190 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 85 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 138
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 195
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 196 EADMWSIGVITYILLSGASPF 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DFGL + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ FGLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ L Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVAT 191
Query: 326 FGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
Y APE +++ + +D++S G ++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 32/206 (15%)
Query: 175 VSSRCRQ------FSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
+ +CRQ ++ + +K+ ++S+ + + EV+I + +I TL+ +
Sbjct: 27 IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN 86
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
++L+ + + G L + L E+ L + I + ++YLHS + + H D
Sbjct: 87 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFD 140
Query: 286 VKSSNILLSSDFQP----QLSDFGLAIWGPTDSTHMIR-----EDVVGTFGYIAPEYLMH 336
+K NI+L P +L DFG+A H I +++ GT ++APE + +
Sbjct: 141 LKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 337 GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + D++S GV+ LLSG P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ L Y+HS +IHRD+K SN+ ++ D + ++ DFGLA + T V T
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVAT 191
Query: 326 FGYIAPEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
Y APE +++ + +D++S G ++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK--GSLEESLHGAGEQSVLPWGVRFE 261
E+ I L+ +I L V L+LV + L + L + G G +SV +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
+ IA Y H R V+HRD+K N+L++ + + +++DFGLA E
Sbjct: 109 LLNGIA----YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 322 VVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSG 358
V T Y AP+ LM K S ID++S G + E+++G
Sbjct: 162 V--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 190
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 244 ALGVLIYEMAAGYPPF 259
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 85 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 138
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 195
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 196 EADMWSIGVITYILLSGASPF 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + E V T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMEPEVVTRYY 191
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG 384
APE ++ + +D++S G ++ E++ + I F G + + +W K I + G
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK--ILF---PGRDYIDQWNKVIEQLG 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ Q++DFGLA + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 38/260 (14%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 85 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 138
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 139 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 193
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D+T ++++ VG Y+ PE + S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 349 GVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLL 408
G +L + G+ P + + I + ++DP E+ + + +
Sbjct: 254 GCILYYMTYGKTP--------------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 409 AANLCINQSPQLRPNMGQVL 428
C+ + P+ R ++ ++L
Sbjct: 300 VLKCCLKRDPKQRISIPELL 319
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 32/206 (15%)
Query: 175 VSSRCRQ------FSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
+ +CRQ ++ + +K+ ++S+ + + EV+I + +I TL+ +
Sbjct: 20 IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN 79
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
++L+ + + G L + L E+ L + I + ++YLHS + + H D
Sbjct: 80 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFD 133
Query: 286 VKSSNILLSSDFQP----QLSDFGLAIWGPTDSTHMIR-----EDVVGTFGYIAPEYLMH 336
+K NI+L P +L DFG+A H I +++ GT ++APE + +
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 337 GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + D++S GV+ LLSG P
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK--GSLEESLHGAGEQSVLPWGVRFE 261
E+ I L+ +I L V L+LV + L + L + G G +SV +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
+ IA Y H R V+HRD+K N+L++ + + +++DFGLA E
Sbjct: 109 LLNGIA----YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 322 VVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSG 358
V T Y AP+ LM K S ID++S G + E+++G
Sbjct: 162 V--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPTDSTHMIREDV 322
+ L Y+HS VIHRD+K SN+L++ + + ++ DFG+A P + + + E
Sbjct: 167 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE-Y 222
Query: 323 VGTFGYIAPEYLMH-GKVSDKIDVYSFGVVLLELLSGRRPIGFKN 366
V T Y APE ++ + + ID++S G + E+L+ R+ KN
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSEC----SRPVI-H 283
L L++D+ GSL + L + + L ++A + L +LH+E +P I H
Sbjct: 110 LYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 284 RDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDV-----VGTFGYIAPEYL---- 334
RD+KS NIL+ + ++D GLA+ +D+ + D+ VGT Y+ PE L
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESL 222
Query: 335 --MHGKVSDKIDVYSFGVVLLEL 355
H + D+YSFG++L E+
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEV 245
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK--GSLEESLHGAGEQSVLPWGVRFE 261
E+ I L+ +I L V L+LV + L + L + G G +SV +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQ 108
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRED 321
+ IA Y H R V+HRD+K N+L++ + + +++DFGLA E
Sbjct: 109 LLNGIA----YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 322 VVGTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSG 358
V T Y AP+ LM K S ID++S G + E+++G
Sbjct: 162 V--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPK--GSLEESLHGAGEQSVLPWGVRFE 261
E+ + L+ K+I L+ V D L LV +F + +S +G + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----S 105
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIRE 320
+ + L + HS R V+HRD+K N+L++ + + +L++FGLA +G +
Sbjct: 106 FLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE- 161
Query: 321 DVVGTFGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRPI 362
V T Y P+ L K+ S ID++S G + EL + RP+
Sbjct: 162 --VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ DF LA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLI 114
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+SS+ +L DFGL+ + DST
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKAS 170
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 175 VSSRCR------QFSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
V +CR Q++ + +K+ +S+ + D EV I ++ ++ TL+ V
Sbjct: 26 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 85
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
+IL+ + + G L + L E+ L E I + YLHS + H D
Sbjct: 86 KTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFD 139
Query: 286 VKSSNILLSSDFQPQ----LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD 341
+K NI+L P+ + DFGLA D + + ++ GT ++APE + + +
Sbjct: 140 LKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFK-NIFGTPEFVAPEIVNYEPLGL 196
Query: 342 KIDVYSFGVVLLELLSGRRPI 362
+ D++S GV+ LLSG P
Sbjct: 197 EADMWSIGVITYILLSGASPF 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 177 SRCRQFSYE--ELKQATSQFSSAWNDFSSEVDITSSLEQK-SITTLNGVCIEDNYLILVS 233
S C++ ++ ++ A + D S E++I Q +I TL V + ++ LV+
Sbjct: 41 SECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVT 100
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL- 292
+ + G L + + Q V I + + YLHS+ V+HRD+K SNIL
Sbjct: 101 ELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILY 154
Query: 293 LSSDFQPQ---LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFG 349
+ P+ + DFG A ++ ++ F +APE L + D++S G
Sbjct: 155 VDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLKRQGYDEGCDIWSLG 212
Query: 350 VVLLELLSGRRPIGFKNLKGPESLV 374
++L +L+G P PE ++
Sbjct: 213 ILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 177 SRCRQFSYE--ELKQATSQFSSAWNDFSSEVDITSSLEQK-SITTLNGVCIEDNYLILVS 233
S C++ ++ ++ A + D S E++I Q +I TL V + ++ LV+
Sbjct: 41 SECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVT 100
Query: 234 DFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL- 292
+ + G L + + Q V I + + YLHS+ V+HRD+K SNIL
Sbjct: 101 ELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILY 154
Query: 293 LSSDFQPQ---LSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFG 349
+ P+ + DFG A ++ ++ F +APE L + D++S G
Sbjct: 155 VDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF--VAPEVLKRQGYDEGCDIWSLG 212
Query: 350 VVLLELLSGRRPIGFKNLKGPESLV 374
++L +L+G P PE ++
Sbjct: 213 ILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ D GLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 136 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 187 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 175 VSSRCRQ------FSYEELKQ---ATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIE 225
+ +CRQ ++ + +K+ +S+ + + EV+I + +I TL+ +
Sbjct: 41 IVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN 100
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
++L+ + + G L + L E+ L + I + ++YLHS + + H D
Sbjct: 101 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFD 154
Query: 286 VKSSNILLSSDFQP----QLSDFGLAIWGPTDSTHMIR-----EDVVGTFGYIAPEYLMH 336
+K NI+L P +L DFG+A H I +++ GT ++APE + +
Sbjct: 155 LKPENIMLLDKNVPNPRIKLIDFGIA--------HKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 337 GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + D++S GV+ LLSG P
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 151 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 207
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 208 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 259
Query: 373 LVKWAK 378
LV+ K
Sbjct: 260 LVEIIK 265
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ D GLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 159 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 215
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 216 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 267
Query: 373 LVKWAK 378
LV+ K
Sbjct: 268 LVEIIK 273
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 157 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 214 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 265
Query: 373 LVKWAK 378
LV+ K
Sbjct: 266 LVEIIK 271
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 138 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 189 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G RF A I YLHS +I+RD+K
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 162
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 216 ALGVLIYEMAAGYPPF 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 215 SITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLH 274
+I L+ V + + LV + L G L E + S + + A++++H
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY---IMRKLVSAVSHMH 123
Query: 275 SECSRPVIHRDVKSSNILLSS---DFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAP 331
V+HRD+K N+L + + + ++ DFG A P D+ + + T Y AP
Sbjct: 124 D---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
Query: 332 EYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
E L + D++S GV+L +LSG+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 161 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 217
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 218 VSYICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 269
Query: 373 LVKWAK 378
LV+ K
Sbjct: 270 LVEIIK 275
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 139 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 190 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG A
Sbjct: 157 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA-------KQ 206
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 207 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 264
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 265 QLVEIIK 271
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 138 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 189 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 143 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 194 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIE-DNYLILVSDFLPKGSLEESL----HGAGEQSVLP 255
F +E I ++ +L G+C+ + ++V ++ G L + H + ++
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA---IWGPT 312
+G++ +A+ + +L S+ +HRD+ + N +L F +++DFGLA
Sbjct: 197 FGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRP 361
DS H + ++A E L K + K DV+SFGV+L EL++ P
Sbjct: 248 DSVHN-KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 202 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 258
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 259 VSYICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 310
Query: 373 LVKWAK 378
LV+ K
Sbjct: 311 LVEIIK 316
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDV- 322
I EAL+Y+HS+ +IHR++K NI + ++ DFGLA + D + +++
Sbjct: 125 ILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 323 ---------VGTFGYIAPEYL-MHGKVSDKIDVYSFGVVLLELL 356
+GT Y+A E L G ++KID YS G++ E +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 225 EDNYLILVSDFLPKGSLEE--------SLHGAGEQSVLPW------GVRFEVAVAIAEAL 270
+N + L+ F P SLEE L GA +++ V+F + I L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 138
Query: 271 NYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIA 330
Y+HS +IHRD+K SN+ ++ D + ++ D GLA + T V T Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT-----GYVATRWYRA 190
Query: 331 PEYLMH-GKVSDKIDVYSFGVVLLELLSGR 359
PE +++ + +D++S G ++ ELL+GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F E + I L GV I +N + ++ + G L L + L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLI 114
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIRE 320
A ++ AL YL S + +HRD+ + N+L+S+ +L DFGL+ + DST+
Sbjct: 115 LYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKAS 170
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-----AGEQSVL 254
+F +E + + L GV + +++ + + +G L+ L A +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 255 PWGV--RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
P + ++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 178
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 196 SAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLP 255
S F E + I L GV I +N + ++ + G L L + L
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLD 489
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDST 315
A ++ AL YL S + +HRD+ + N+L+S+ +L DFGL+ + DST
Sbjct: 490 LASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDST 545
Query: 316 HMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLE-LLSGRRPI-GFKN 366
+ ++APE + + + DV+ FGV + E L+ G +P G KN
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQ----SVLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 173
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKG 369
T R+ G +++PE L G + DV+SFGVVL E+ + +P ++ L
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSN 231
Query: 370 PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
+ L + +++ G LLD DN +L +C +P++RP+ +++
Sbjct: 232 EQVL----RFVMEGG----LLDKP-----DNCP-DMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
AL +LHS+ ++H DVK +NI L + +L DFGL + T ++E G Y
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRY 222
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLEL 355
+APE L+ G DV+S G+ +LE+
Sbjct: 223 MAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHG-----AGEQSVL 254
+F +E + + L GV + +++ + + +G L+ L A +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 255 PWGV--RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
P + ++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 188
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
EV + L+ +I TL+ + + L LV ++L K L++ L G +++
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG--NIINMHNVKLFL 106
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVV 323
+ L Y H + V+HRD+K N+L++ + +L+DFGLA + T +VV
Sbjct: 107 FQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVV 162
Query: 324 GTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
T Y P+ L+ S +ID++ G + E+ +GR
Sbjct: 163 -TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 128 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 184
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 185 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 236
Query: 373 LVKWAK 378
LV+ K
Sbjct: 237 LVEIIK 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 136 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 193 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 244
Query: 373 LVKWAK 378
LV+ K
Sbjct: 245 LVEIIK 250
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV + + + ++ A + +P +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDL--KTFMDASALTGIPLPLIKSYL 108
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEV 163
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
A+ Y H ++HRD+K N+LL + +++DFGL+ TD + + G+ Y
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFL--KTSCGSPNY 173
Query: 329 IAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRRP 361
APE +++GK+ ++DV+S G+VL +L GR P
Sbjct: 174 AAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 196
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGR 359
APE ++ + +D++S G ++ E++ +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG A
Sbjct: 135 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA-------KQ 184
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 242
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 243 QLVEIIK 249
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGY 328
+ +LHS +IHRD+K SNI++ SD ++ DFGLA T T + V T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTSFMMTPYVVTRYY 185
Query: 329 IAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAKPILKNG 384
APE ++ + +D++S G ++ E++ + I F G + + +W K I + G
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK--ILF---PGRDYIDQWNKVIEQLG 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG A
Sbjct: 131 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA-------KQ 180
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 181 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 238
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 239 QLVEIIK 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ +++DFGLA + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG A
Sbjct: 135 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA-------KQ 184
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 242
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 243 QLVEIIK 249
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 16/113 (14%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A++Y H V+HRD+K N+LL + +++DFGL+ +R D G+
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLR-DSCGS 173
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRRPIG-------FKNLKG 369
Y APE ++ G++ ++D++S GV+L LL G P FK ++G
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG A
Sbjct: 142 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA-------KQ 191
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 192 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 249
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 250 QLVEIIK 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 180 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 231
Query: 373 LVKWAK 378
LV+ K
Sbjct: 232 LVEIIK 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 200 DFSSEVDITSSLEQK-SITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
D + E++I Q +I TL V + Y+ +V++ + G L + + Q
Sbjct: 61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSERE 117
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL-LSSDFQPQ---LSDFGLAIWGPTDS 314
V I + + YLH++ V+HRD+K SNIL + P+ + DFG A ++
Sbjct: 118 ASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPESL- 373
++ F +APE L D++S GV+L +L+G P PE +
Sbjct: 175 GLLMTPCYTANF--VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
Query: 374 --VKWAKPILKNG------DTETLLDPKLSNEYDNAQMQRMLLAANLCI---NQSPQLRP 422
+ K L G DT L K+ + + ++ L+ + I +Q PQ +
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
Query: 423 NMGQVLKLLRGATHAT 438
N L++GA AT
Sbjct: 293 NRQDAPHLVKGAMAAT 308
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E I ++ +T L +++ L +V ++ P G + L G S P RF
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-Y 147
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIRE 320
A I YLHS +I+RD+K N+++ +++DFG A + G T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------W 197
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT Y+APE ++ + +D ++ GV++ E+ +G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 182 FSYEELKQATSQFSSAWNDFSSEVDITSSLEQKS--ITTLNGVCIEDNYLILVSDFLPKG 239
Y L++A +Q + + +E+ + L+Q S I L I D Y+ +V + G
Sbjct: 57 IKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---G 110
Query: 240 SLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP 299
+++ + ++S+ PW R + EA++ +H ++H D+K +N L+ D
Sbjct: 111 NIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 165
Query: 300 QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDK-----------IDVYSF 348
+L DFG+A D ++++ VGT Y+ PE + S + DV+S
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 349 GVVLLELLSGRRP 361
G +L + G+ P
Sbjct: 226 GCILYYMTYGKTP 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-------SAKQ 172
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 230
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 231 QLVEIIK 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E I ++ +T L +++ L +V ++ P G + L G S P RF
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-Y 147
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIRE 320
A I YLHS +I+RD+K N+++ +++DFG A + G T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------W 197
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT Y+APE ++ + +D ++ GV++ E+ +G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-------SAKQ 172
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 230
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 231 QLVEIIK 237
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 204 EVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVA 263
E+ + L +I L V +N L LV + + + + A + +P +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPLIKSYL 112
Query: 264 VAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
+ + L + HS V+HRD+K N+L++++ +L+DFGLA +G T+ +V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX--HEV 167
Query: 323 VGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGR 359
V T Y APE L+ K S +D++S G + E+++ R
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG +
Sbjct: 124 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-------SAKQ 173
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 174 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 231
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 232 QLVEIIK 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG +
Sbjct: 127 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-------SAKQ 176
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 177 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 234
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 235 QLVEIIK 241
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 190
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + + GT Y+APE ++ + +D +
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGATWT-------LCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 244 ALGVLIYEMAAGYPPF 259
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 180 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 231
Query: 373 LVKWAK 378
LV+ K
Sbjct: 232 LVEIIK 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P+ + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLA---IWGPTD 313
+ +L Y+HS + HRD+K N+LL D +L DFG A + G +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
+++ Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 180 VSYICSR------YYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVDQ 231
Query: 373 LVKWAK 378
LV+ K
Sbjct: 232 LVEIIK 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
++LV++ G+L+ L V V I + L +LH+ + P+IHRD+K
Sbjct: 104 IVLVTELXTSGTLKTYLKRF---KVXKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKC 159
Query: 289 SNILLSS-DFQPQLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYS 347
NI ++ ++ D GLA T + V+GT + APE K + +DVY+
Sbjct: 160 DNIFITGPTGSVKIGDLGLA----TLKRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYA 214
Query: 348 FGVVLLELLSGRRP 361
FG LE + P
Sbjct: 215 FGXCXLEXATSEYP 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQ----SVLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 182
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 228 YLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
YL LV D++P+ + H + + LP + +L Y+HS + HRD+K
Sbjct: 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIK 149
Query: 288 SSNILLSSDFQP-QLSDFGLAIWGPTDSTHMIRED----VVGTFGYIAPEYLMHGK-VSD 341
N+LL D +L DFG + ++R + + + Y APE + +
Sbjct: 150 PQNLLLDPDTAVLKLCDFG-------SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 202
Query: 342 KIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVKWAK 378
IDV+S G VL ELL G +PI F G + LV+ K
Sbjct: 203 SIDVWSAGCVLAELLLG-QPI-FPGDSGVDQLVEIIK 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLAGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 204 EVDITSSLEQKSITTL------NGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWG 257
E+ I L+ +I L +G ++ YL LV D++P + H + + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+ +L Y+HS + HRD+K N+LL D +L DFG +
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-------SAKQ 172
Query: 317 MIRED----VVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
++R + + + Y APE + + IDV+S G VL ELL G +PI F G +
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-FPGDSGVD 230
Query: 372 SLVKWAK 378
LV+ K
Sbjct: 231 QLVEIIK 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLXGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS----VLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 175
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS-----VL 254
+F +E + + L GV + +++ + + +G L+ L + +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 255 PWGV--RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
P + ++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 179
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G S P RF A I YLHS +I+RD+K
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 170
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + + YLH + +IHRD+K SN+L+ D +++DFG++ + + + VGT
Sbjct: 146 LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSDALLSNTVGT 200
Query: 326 FGYIAPEYLMHGK---VSDKIDVYSFGVVLLELLSGRRPI 362
++APE L + +DV++ GV L + G+ P
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + L Y+HS V+HRD+K N+ ++ D + ++ DFGLA + T V T
Sbjct: 153 MLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVT 204
Query: 326 FGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLSGR 359
Y APE + MH + +D++S G ++ E+L+G+
Sbjct: 205 RWYRAPEVILSWMH--YNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + L Y+HS V+HRD+K N+ ++ D + ++ DFGLA + T V T
Sbjct: 135 MLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVT 186
Query: 326 FGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLSGR 359
Y APE + MH + +D++S G ++ E+L+G+
Sbjct: 187 RWYRAPEVILSWMH--YNQTVDIWSVGCIMAEMLTGK 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 103 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 156
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 209
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 210 ALGVLIYEMAAGYPPF 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S L ++I GV ++ ++ + + G L+ L + P +
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS----VLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 181
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKG 369
T R+ G +++PE L G + DV+SFGVVL E+ + +P ++ L
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSN 239
Query: 370 PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
+ L + +++ G LLD DN + +C +P++RP+ +++
Sbjct: 240 EQVL----RFVMEGG----LLDKP-----DNCP-DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGLAIW---------GPTDSTHMIREDVVGTFGYIAP 331
VIHRD+K SN+L++S+ ++ DFGLA PT + E V T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE-YVATRWYRAP 191
Query: 332 EYLM-HGKVSDKIDVYSFGVVLLELLSGRRPI 362
E ++ K S +DV+S G +L EL RRPI
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS----VLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 182
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKG 369
T R+ G +++PE L G + DV+SFGVVL E+ + +P ++ L
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSN 240
Query: 370 PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
+ L + +++ G LLD DN + +C +P++RP+ +++
Sbjct: 241 EQVL----RFVMEGG----LLDKP-----DNCP-DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEV 262
+E I ++ +T L +++ L +V ++ P G + L G RF
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARF-Y 147
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIRE 320
A I YLHS +I+RD+K N+++ +++DFG A + G T
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------W 197
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT Y+APE ++ + +D ++ GV++ E+ +G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+ EV I + +I TL+ V ++L+ + + G L + L ++ L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEA 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP----QLSDFGLAIWGPTDST 315
I + +NYLH+ + + H D+K NI+L P +L DFGLA
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------- 166
Query: 316 HMIRE-----DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H I + ++ GT ++APE + + + + D++S GV+ LLSG P
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS-----VL 254
+F +E + + L GV + +++ + + +G L+ L + +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 255 PWGV--RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
P + ++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 188
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS----VLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N ++ DF ++ DFG+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMT--RDI 175
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKG 369
T R+ G +++PE L G + DV+SFGVVL E+ + +P ++ L
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSN 233
Query: 370 PESLVKWAKPILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVL 428
+ L + +++ G LLD DN +L +C +P++RP+ +++
Sbjct: 234 EQVL----RFVMEGG----LLDKP-----DNCP-DMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSD----FQPQLSDFGLAIW 309
LP G+ + I + ++YLH+ V+HRD+K +NIL+ + + +++D G A
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 310 GPTDSTHMIRED-VVGTFGYIAPEYLMHGKVSDK-IDVYSFGVVLLELLS 357
+ + D VV TF Y APE L+ + K ID+++ G + ELL+
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F SE I +L+ I L G+ IE+ ++ + P G L L + V +
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 114
Query: 261 EVAVAIAEALNYLHS-ECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++ I +A+ YL S C +HRD+ NIL++S +L DFGL+ + D +
Sbjct: 115 --SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKA 167
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI 362
+++PE + + + DV+ F V + E+LS G++P
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGLAIW---------GPTDSTHMIREDVVGTFGYIAP 331
VIHRD+K SN+L++S+ ++ DFGLA PT + E V T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE-XVATRWYRAP 191
Query: 332 EYLM-HGKVSDKIDVYSFGVVLLELLSGRRPI 362
E ++ K S +DV+S G +L EL RRPI
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS-----VL 254
+F +E + + L GV + +++ + + +G L+ L + +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 255 PWGV--RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
P + ++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 181
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F SE I +L+ I L G+ IE+ ++ + P G L L + V +
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 130
Query: 261 EVAVAIAEALNYLHS-ECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++ I +A+ YL S C +HRD+ NIL++S +L DFGL+ + D +
Sbjct: 131 --SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKA 183
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI 362
+++PE + + + DV+ F V + E+LS G++P
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 201 FSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRF 260
F SE I +L+ I L G+ IE+ ++ + P G L L + V +
Sbjct: 60 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 261 EVAVAIAEALNYLHS-ECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIR 319
++ I +A+ YL S C +HRD+ NIL++S +L DFGL+ + D +
Sbjct: 119 --SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKA 171
Query: 320 EDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS-GRRPI 362
+++PE + + + DV+ F V + E+LS G++P
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 281 VIHRDVKSSNILLSSDFQPQLSDFGLAIW---------GPTDSTHMIREDVVGTFGYIAP 331
VIHRD+K SN+L++S+ ++ DFGLA PT + E V T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE-FVATRWYRAP 191
Query: 332 EYLM-HGKVSDKIDVYSFGVVLLELLSGRRPI 362
E ++ K S +DV+S G +L EL RRPI
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQS----VLP 255
+F +E + + L GV + +++ + + +G L+ L + VL
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 256 ---WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPT 312
++A IA+ + YL++ +HRD+ + N +++ DF ++ DFG+
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT--RDI 210
Query: 313 DSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
T R+ G +++PE L G + DV+SFGVVL E+
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S L ++I GV ++ ++ + + G L+ L + P +
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G + P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIG-RFAEP-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A+ Y H ++HRD+K N+LL +++DFGL+ TD + + G+
Sbjct: 122 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFL--KTSCGS 175
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRR-------PIGFKNL-KGPESLVK 375
Y APE ++ GK+ ++DV+S GV+L +L R P+ FKN+ G +L K
Sbjct: 176 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 234
Query: 376 WAKP 379
+ P
Sbjct: 235 FLSP 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A++Y H V+HRD+K N+LL + +++DFGL+ +R G+
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRTS-CGS 173
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRRPIG-------FKNLKG 369
Y APE ++ G++ ++D++S GV+L LL G P FK ++G
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A+ Y H ++HRD+K N+LL +++DFGL+ TD + + G+
Sbjct: 121 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFL--KTSCGS 174
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRR-------PIGFKNL-KGPESLVK 375
Y APE ++ GK+ ++DV+S GV+L +L R P+ FKN+ G +L K
Sbjct: 175 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 233
Query: 376 WAKP 379
+ P
Sbjct: 234 FLSP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A+ Y H ++HRD+K N+LL +++DFGL+ TD + + G+
Sbjct: 112 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFL--KTSCGS 165
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRR-------PIGFKNL-KGPESLVK 375
Y APE ++ GK+ ++DV+S GV+L +L R P+ FKN+ G +L K
Sbjct: 166 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 224
Query: 376 WAKP 379
+ P
Sbjct: 225 FLSP 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSD--FQPQLSDFGLA--IWGPTDSTHMIRED 321
I AL+YLH++ + HRD+K N L S++ F+ +L DFGL+ + + +
Sbjct: 177 IFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 322 VVGTFGYIAPEYL--MHGKVSDKIDVYSFGVVLLELLSGRRPI 362
GT ++APE L + K D +S GV+L LL G P
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 168 TELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDN 227
TE+ LK++ R +S F + S L K + GVC+ +
Sbjct: 41 TEVLLKVLDKAHRNYS---------------ESFFEAASMMSKLSHKHLVLNYGVCVCGD 85
Query: 228 YLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
ILV +F+ GSL+ L + W + EVA +A A+++L +IH +V
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVC 140
Query: 288 SSNILLSSD-----FQP---QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGK- 338
+ NILL + P +LSD G++I T + ++ + ++ PE + + K
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISI------TVLPKDILQERIPWVPPECIENPKN 194
Query: 339 VSDKIDVYSFGVVLLELLSG 358
++ D +SFG L E+ SG
Sbjct: 195 LNLATDKWSFGTTLWEICSG 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I A+ Y H ++HRD+K N+LL +++DFGL+ TD + + G+
Sbjct: 116 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFL--KTSCGS 169
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRR-------PIGFKNL-KGPESLVK 375
Y APE ++ GK+ ++DV+S GV+L +L R P+ FKN+ G +L K
Sbjct: 170 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 228
Query: 376 WAKP 379
+ P
Sbjct: 229 FLSP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 27/171 (15%)
Query: 269 ALNYLHSECSRPVIHRDVKSSNILLS-----SDFQPQLSDFGLA-IWGPTDSTHMIREDV 322
L +LHS ++HRD+K NIL+S + +SDFGL + R V
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 323 VGTFGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLS-GRRPIGFKNLKGPESLVKWAK 378
GT G+IAPE L + +D++S G V ++S G P G +SL + A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG-------KSLQRQAN 239
Query: 379 PILKNGDTETLLDPKLSNEYDNAQMQRMLLAANLCINQSPQLRPNMGQVLK 429
+L + L K + +++M I PQ RP+ VLK
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELIEKM-------IAMDPQKRPSAKHVLK 283
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G RF A I YLHS +I+RD+K
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 164
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 217
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 218 ALGVLIYEMAAGYPPF 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL------EESLHGAGEQSV 253
+ EV I + ++ TL+ V ++L+ + + G L +ESL S
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP----QLSDFGLAIW 309
+ I + +NYLH+ + + H D+K NI+L P +L DFGLA
Sbjct: 121 IK---------QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-- 166
Query: 310 GPTDSTHMIRE-----DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H I + ++ GT ++APE + + + + D++S GV+ LLSG P
Sbjct: 167 ------HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ ++ +G P
Sbjct: 223 ALGVLIYQMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ Q++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLIIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIIISKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V ++ P G + L G RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+++ +++DFG A + G T + GT Y+APE ++ + +D +
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL------EESLHGAGEQSV 253
+ EV I + ++ TL+ V ++L+ + + G L +ESL S
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP----QLSDFGLAIW 309
+ I + +NYLH+ + + H D+K NI+L P +L DFGLA
Sbjct: 121 IK---------QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-- 166
Query: 310 GPTDSTHMIRE-----DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H I + ++ GT ++APE + + + + D++S GV+ LLSG P
Sbjct: 167 ------HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 32/206 (15%)
Query: 175 VSSRCRQ------FSYEELKQATSQFSS---AWNDFSSEVDITSSLEQKSITTLNGVCIE 225
+ +CR+ ++ + +K+ S+ S + + EV I + ++ TL+ V
Sbjct: 27 IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN 86
Query: 226 DNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRD 285
++L+ + + G L + L ++ L I + +NYLH+ + + H D
Sbjct: 87 RTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFD 140
Query: 286 VKSSNILLSSDFQP----QLSDFGLAIWGPTDSTHMIRE-----DVVGTFGYIAPEYLMH 336
+K NI+L P +L DFGLA H I + ++ GT ++APE + +
Sbjct: 141 LKPENIMLLDKNIPIPHIKLIDFGLA--------HEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 337 GKVSDKIDVYSFGVVLLELLSGRRPI 362
+ + D++S GV+ LLSG P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 263 AVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLA--IWGPTDSTHMIRE 320
A I YLHS +I+RD+K N+L+ Q++DFG A + G T
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------W 217
Query: 321 DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ GT Y+APE ++ + +D ++ GV++ E+ +G P
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ A+ YL + +IHRD+K NI+++ DF +L DFG A + GT
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY---TFCGT 192
Query: 326 FGYIAPEYLMHGKV-SDKIDVYSFGVVLLELLSGRRPI 362
Y APE LM +++++S GV L L+ P
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 196 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL------EESLHGAGEQSV 253
+ EV I + ++ TL+ V ++L+ + + G L +ESL S
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 254 LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP----QLSDFGLAIW 309
+ I + +NYLH+ + + H D+K NI+L P +L DFGLA
Sbjct: 121 IK---------QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-H 167
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
D +++ GT ++APE + + + + D++S GV+ LLSG P
Sbjct: 168 EIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 106 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 166 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 223 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 96 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 156 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 213 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
+ EV I + ++ TL+ V ++L+ + + G L + L ++ L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEA 117
Query: 260 FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP----QLSDFGLAIWGPTDST 315
I + +NYLH+ + + H D+K NI+L P +L DFGLA
Sbjct: 118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------- 166
Query: 316 HMIRE-----DVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
H I + ++ GT ++APE + + + + D++S GV+ LLSG P
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
+ + L Y+H+ +IHRD+K N+ ++ D + ++ DFGLA ++ V T
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMX-----GXVVT 188
Query: 326 FGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGR 359
Y APE +++ + + +D++S G ++ E+++G+
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGPTDSTHMIREDVVGT 325
I ++Y H V+HRD+K N+LL + +++DFGL+ +R G+
Sbjct: 125 ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRXS-CGS 178
Query: 326 FGYIAPEYLMHGKV--SDKIDVYSFGVVLLELLSGRRPI 362
Y APE ++ G++ ++D++S GV+L LL G P
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 146 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 203 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSSDF---QPQLSDFGLAIWGPTDSTHMIREDV 322
I E + YLH ++H D+K NILLSS + ++ DFG++ +RE +
Sbjct: 140 ILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS--RKIGHACELRE-I 193
Query: 323 VGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+GT Y+APE L + ++ D+++ G++ LL+ P
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 196 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR 196
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 131 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 188 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 188 KQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL-EESLH 246
K+ F + F E++I SL+ +I L ++ + LV + G L E +H
Sbjct: 40 KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH 99
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILL---SSDFQPQLSD 303
+ V + + A+ Y H V HRD+K N L S D +L D
Sbjct: 100 ----KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLID 152
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
FGLA M+R VGT Y++P+ ++ G + D +S GV++ LL G P
Sbjct: 153 FGLA--ARFKPGKMMRTK-VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 188 KQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL-EESLH 246
K+ F + F E++I SL+ +I L ++ + LV + G L E +H
Sbjct: 57 KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH 116
Query: 247 GAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILL---SSDFQPQLSD 303
+ V + + A+ Y H V HRD+K N L S D +L D
Sbjct: 117 ----KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLID 169
Query: 304 FGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
FGLA M+R VGT Y++P+ ++ G + D +S GV++ LL G P
Sbjct: 170 FGLA--ARFKPGKMMRTK-VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT Y+AP ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPAIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
S + + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 168 TELFLKLVSSRCRQFSYEELKQATSQFSSAWNDFSSEVDITSSLEQKSITTLNGVCIEDN 227
TE+ LK++ R +S F + S L K + GVC +
Sbjct: 41 TEVLLKVLDKAHRNYS---------------ESFFEAASMMSKLSHKHLVLNYGVCFCGD 85
Query: 228 YLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVK 287
ILV +F+ GSL+ L + W + EVA +A A+++L +IH +V
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT---LIHGNVC 140
Query: 288 SSNILLSSD-----FQP---QLSDFGLAIWGPTDSTHMIREDVVGTFGYIAPEYLMHGK- 338
+ NILL + P +LSD G++I T + ++ + ++ PE + + K
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISI------TVLPKDILQERIPWVPPECIENPKN 194
Query: 339 VSDKIDVYSFGVVLLELLSG 358
++ D +SFG L E+ SG
Sbjct: 195 LNLATDKWSFGTTLWEICSG 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSL-----EESLHGAGEQSVL 254
+ +E+ + + L+ ++ L N ++LV +++ G L +ES + ++L
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 255 PWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL-LSSDF-QPQLSDFGLAIWGPT 312
I E + ++H ++H D+K NIL ++ D Q ++ DFGLA
Sbjct: 192 -------FMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLA----- 236
Query: 313 DSTHMIREDVVGTFG---YIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPI 362
+ RE + FG ++APE + + VS D++S GV+ LLSG P
Sbjct: 237 -RRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 200 DFSSEVDITSSLEQK-SITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGV 258
D + E++I Q +I TL V + Y+ +V++ G L + + Q
Sbjct: 61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL---RQKFFSERE 117
Query: 259 RFEVAVAIAEALNYLHSECSRPVIHRDVKSSNIL-LSSDFQPQ---LSDFGLAIWGPTDS 314
V I + + YLH++ V+HRD+K SNIL + P+ + DFG A +
Sbjct: 118 ASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFA--KQLRA 172
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPE 371
+ + T ++APE L D++S GV+L L+G P F N GP+
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP--FAN--GPD 225
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+L+ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 97 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 157 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 213
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+ + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 214 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 10/165 (6%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYLILVSDFLPKGSLEESLHGAGEQSVLPWGVR 259
DF E I S ++I GV ++ ++ + + G L+ L + P +
Sbjct: 120 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 260 ----FEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQ---PQLSDFGLAIWGPT 312
VA IA YL IHRD+ + N LL+ ++ DFG+A
Sbjct: 180 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 236
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLS 357
+ + ++ PE M G + K D +SFGV+L E+ S
Sbjct: 237 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 200 DFSSEVDITSSLEQKSITTLNGVCIEDNYL-----ILVSDFLPKGSLEESLHGAGEQSV- 253
+F SE ++ L GVCIE + +++ F+ G L L + ++
Sbjct: 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP 141
Query: 254 --LPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAIWGP 311
+P + V IA + YL +R +HRD+ + N +L D ++DFGL+
Sbjct: 142 KHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLS--KK 196
Query: 312 TDSTHMIREDVVGTF--GYIAPEYLMHGKVSDKIDVYSFGVVLLEL 355
S R+ + +IA E L + K DV++FGV + E+
Sbjct: 197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 125 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 181 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 236
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 237 NYDQLVRIAKVL----GTEDLYD 255
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 125 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 181 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 236
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 237 NYDQLVRIAKVL----GTEDLYD 255
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 203 SEVDITSSLEQKSITTLNGVCIEDNY-LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFE 261
+E+ I + L + L+ ED Y ++L+ +FL G L + + A E +
Sbjct: 97 NEISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRI--AAE----------D 143
Query: 262 VAVAIAEALNYLHSECS-------RPVIHRDVKSSNILLSSDFQP--QLSDFGLAIWGPT 312
++ AE +NY+ C ++H D+K NI+ + ++ DFGLA
Sbjct: 144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203
Query: 313 DSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVYSFGVVLLELLSGRRPIG 363
D I + T + APE + V D+++ GV+ LLSG P
Sbjct: 204 DE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 229 LILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKS 288
L +V +++ G + L G S P RF A I YLHS +I+RD+K
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSE-P-HARF-YAAQIVLTFEYLHS---LDLIYRDLKP 169
Query: 289 SNILLSSDFQPQLSDFGLA--IWGPTDSTHMIREDVVGTFGYIAPEYLMHGKVSDKIDVY 346
N+L+ Q++DFG A + G T + GT +APE ++ + +D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEALAPEIILSKGYNKAVDWW 222
Query: 347 SFGVVLLELLSGRRPI 362
+ GV++ E+ +G P
Sbjct: 223 ALGVLIYEMAAGYPPF 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 44/197 (22%)
Query: 223 CIEDN-YLILVSDFLPKGSLEESLHGAGEQSVLPWGVRFEVAVAIAEALNYLHSECSRPV 281
C N ++++ +L S + L+ Q V E + + +AL +H +
Sbjct: 88 CFRKNDHVVIAMPYLEHESFLDILNSLSFQEVR------EYMLNLFKALKRIHQ---FGI 138
Query: 282 IHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTHMI---------------------- 318
+HRDVK SN L + + L DFGLA G D+ +
Sbjct: 139 VHRDVKPSNFLYNRRLKKYALVDFGLA-QGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 319 --REDVV---GTFGYIAPEYLMHG-KVSDKIDVYSFGVVLLELLSGRRPIGFKNLKGPES 372
R+ V GT G+ APE L + ID++S GV+ L LLSGR P K +
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF----YKASDD 253
Query: 373 LVKWAKPILKNGDTETL 389
L A+ + G ET+
Sbjct: 254 LTALAQIMTIRGSRETI 270
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 268 EALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGLAI-WGPTDSTHMIREDVVGTF 326
+ L YLH ++HRD+K +N+LL + +L+DFGLA +G + + + V T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ---VVTR 176
Query: 327 GYIAPEYLMHGKVSD-KIDVYSFGVVLLELL 356
Y APE L ++ +D+++ G +L ELL
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 124 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 180 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 235
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 236 NYDQLVRIAKVL----GTEDLYD 254
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 131 QTLTDYDIRFYM-YEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 187 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 242
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 243 NYDQLVRIAKVL----GTEDLYD 261
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q++ + +RF + I +AL+Y HS ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 QTLTDYDIRFYMY-EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ + P F
Sbjct: 182 YHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHD 237
Query: 369 GPESLVKWAKPILKNGDTETLLD 391
+ LV+ AK + TE L D
Sbjct: 238 NYDQLVRIAKVL----GTEDLYD 256
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 204 EVDITSSLEQKSITTLNGVCIED--------NYLILVSDFLPKGSLEESLHGAGEQSVLP 255
E+ I L+ +++ L +C + LV DF E L G ++
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 121
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL--AIWGPTD 313
+ + E+ + LN L+ ++HRD+K++N+L++ D +L+DFGL A +
Sbjct: 122 FTLS-EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPI 362
S + V T Y PE L+ + ID++ G ++ E+ + R PI
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS-------------DFQPQLSDFGLAIWGPT 312
IA + +LHS +IHRD+K NIL+S+ + + +SDFGL
Sbjct: 142 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC--KKL 196
Query: 313 DSTH-MIREDV---VGTFGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLS-GRRPIG 363
DS R ++ GT G+ APE L +++ ID++S G V +LS G+ P G
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 266 IAEALNYLHSECSRPVIHRDVKSSNILLSS-------------DFQPQLSDFGLAIWGPT 312
IA + +LHS +IHRD+K NIL+S+ + + +SDFGL
Sbjct: 142 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC--KKL 196
Query: 313 DSTH-MIREDV---VGTFGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLS-GRRPIG 363
DS R ++ GT G+ APE L +++ ID++S G V +LS G+ P G
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 251 QSVLPWGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIW 309
Q + + +RF + + +AL+Y HS + ++HRDVK N+++ + +L D+GLA +
Sbjct: 127 QILTDFDIRFYM-YELLKALDYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
Query: 310 GPTDSTHMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLK 368
+ +R V + + PE L+ ++ D +D++S G +L ++ R P F
Sbjct: 183 YHPAQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF-FHGQD 238
Query: 369 GPESLVKWAK 378
+ LV+ AK
Sbjct: 239 NYDQLVRIAK 248
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 204 EVDITSSLEQKSITTLNGVCIED--------NYLILVSDFLPKGSLEESLHGAGEQSVLP 255
E+ I L+ +++ L +C + LV DF E L G ++
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 121
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL--AIWGPTD 313
+ + E+ + LN L+ ++HRD+K++N+L++ D +L+DFGL A +
Sbjct: 122 FTLS-EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPI 362
S + V T Y PE L+ + ID++ G ++ E+ + R PI
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 204 EVDITSSLEQKSITTLNGVCIED--------NYLILVSDFLPKGSLEESLHGAGEQSVLP 255
E+ I L+ +++ L +C + LV DF E L G ++
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVK 120
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL--AIWGPTD 313
+ + E+ + LN L+ ++HRD+K++N+L++ D +L+DFGL A +
Sbjct: 121 FTLS-EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 314 STHMIREDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPI 362
S + V T Y PE L+ + ID++ G ++ E+ + R PI
Sbjct: 180 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 258 VRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDSTH 316
+RF + + +AL+Y HS + ++HRDVK N+++ + +L D+GLA + +
Sbjct: 139 IRFYM-YELLKALDYCHS---KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY 194
Query: 317 MIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESLVK 375
+R V + + PE L+ ++ D +D++S G +L ++ R P F + LV+
Sbjct: 195 NVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF-FHGQDNYDQLVR 250
Query: 376 WAK 378
AK
Sbjct: 251 IAK 253
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDS 314
+ +R+ + + +AL+Y HS+ ++HRDVK N+++ + + +L D+GLA +
Sbjct: 146 YDIRYYI-YELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 201
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ +R V + + PE L+ + D +D++S G + ++ + P F + L
Sbjct: 202 EYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQL 257
Query: 374 VKWAKPILKNGDTETL------LDPKL 394
VK AK + +G L LDP+L
Sbjct: 258 VKIAKVLGTDGLNAYLNKYRIELDPQL 284
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDS 314
+ +R+ + + +AL+Y HS+ ++HRDVK N+++ + + +L D+GLA +
Sbjct: 125 YDIRYYI-YELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ +R V + + PE L+ + D +D++S G + ++ + P F + L
Sbjct: 181 EYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQL 236
Query: 374 VKWAKPILKNGDTETL------LDPKL 394
VK AK + +G L LDP+L
Sbjct: 237 VKIAKVLGTDGLNVYLNKYRIELDPQL 263
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 261 EVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFGL--AIWGPTDSTHMI 318
E+ + LN L+ ++HRD+K++N+L++ D +L+DFGL A +S
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 319 REDVVGTFGYIAPEYLMHGK-VSDKIDVYSFGVVLLELLSGRRPI 362
+ V T Y PE L+ + ID++ G ++ E+ + R PI
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDS 314
+ +R+ + + +AL+Y HS+ ++HRDVK N+++ + + +L D+GLA +
Sbjct: 127 YDIRYYI-YELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 182
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ +R V + + PE L+ + D +D++S G + ++ + P F + L
Sbjct: 183 EYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQL 238
Query: 374 VKWAKPILKNGDTETL------LDPKL 394
VK AK + +G L LDP+L
Sbjct: 239 VKIAKVLGTDGLNVYLNKYRIELDPQL 265
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 262 VAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQPQLSDFG----LAIWGPTDSTHM 317
+ + I L +H+ + HRD+K +NILL + QP L D G I +
Sbjct: 139 LLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 318 IREDVVG---TFGYIAPEYL---MHGKVSDKIDVYSFGVVLLELLSGRRPIGFKNLKG 369
+D T Y APE H + ++ DV+S G VL ++ G P KG
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDS 314
+ +R+ + + +AL+Y HS+ ++HRDVK N+++ + + +L D+GLA +
Sbjct: 126 YDIRYYI-YELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ +R V + + PE L+ + D +D++S G + ++ + P F + L
Sbjct: 182 EYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQL 237
Query: 374 VKWAKPILKNGDTETL------LDPKL 394
VK AK + +G L LDP+L
Sbjct: 238 VKIAKVLGTDGLNVYLNKYRIELDPQL 264
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 256 WGVRFEVAVAIAEALNYLHSECSRPVIHRDVKSSNILLSSDFQP-QLSDFGLAIWGPTDS 314
+ +R+ + + +AL+Y HS+ ++HRDVK N+++ + + +L D+GLA +
Sbjct: 125 YDIRYYI-YELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 315 THMIREDVVGTFGYIAPEYLMHGKVSD-KIDVYSFGVVLLELLSGRRPIGFKNLKGPESL 373
+ +R V + + PE L+ + D +D++S G + ++ + P F + L
Sbjct: 181 EYNVR---VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF-FYGHDNHDQL 236
Query: 374 VKWAKPILKNGDTETL------LDPKL 394
VK AK + +G L LDP+L
Sbjct: 237 VKIAKVLGTDGLNVYLNKYRIELDPQL 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,851,754
Number of Sequences: 62578
Number of extensions: 676157
Number of successful extensions: 2858
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 1105
length of query: 522
length of database: 14,973,337
effective HSP length: 103
effective length of query: 419
effective length of database: 8,527,803
effective search space: 3573149457
effective search space used: 3573149457
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)