BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036173
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QXN3|TRIP4_MOUSE Activating signal cointegrator 1 OS=Mus musculus GN=Trip4 PE=1 SV=2
Length = 581
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Query: 14 CLTMHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKIPEEATIKAMEEFYREIYAVN 73
CL+MHQPWASLLV GIKRVEGRSW P RGRLWI A K P + ++ YR +
Sbjct: 436 CLSMHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATGKRPSPQEVSELQATYRLLRG-- 493
Query: 74 GITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQTDFCWLCENPQKLL 133
D++FP YP LLGCV+++ C+ ++ E P+ + E+ + F ++C+NPQ+++
Sbjct: 494 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFQ--EQFPD-ISQESDSSFVFICKNPQEMV 548
Query: 134 VPFEMRGYQGVYNLEKKVYEAAVRGL 159
V F ++G ++ L+ K+++ A +GL
Sbjct: 549 VKFPIKGNPKIWKLDSKIHQGAKKGL 574
>sp|Q15650|TRIP4_HUMAN Activating signal cointegrator 1 OS=Homo sapiens GN=TRIP4 PE=1 SV=4
Length = 581
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 7/146 (4%)
Query: 14 CLTMHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKIPEEATIKAMEEFYREIYAVN 73
CL++HQPWASLLV GIKRVEGRSW P RGRLWI A +K P + ++ YR +
Sbjct: 436 CLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATAKKPSPQEVSELQATYRLLRG-- 493
Query: 74 GITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQTDFCWLCENPQKLL 133
D++FP YP LLGCV+++ C+ ++ E P+ + E+ + F ++C+NPQ+++
Sbjct: 494 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFK--EQFPD-ISQESDSPFVFICKNPQEMV 548
Query: 134 VPFEMRGYQGVYNLEKKVYEAAVRGL 159
V F ++G ++ L+ K+++ A +GL
Sbjct: 549 VKFPIKGNPKIWKLDSKIHQGAKKGL 574
>sp|Q9D1F3|CX040_MOUSE Uncharacterized protein CXorf40 homolog OS=Mus musculus PE=2 SV=1
Length = 157
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 13 PCLTMHQPWASLLVYGIKRVEGRSWP---APLRGRLWIHAASKIPEEATIK--AMEEFYR 67
PCL+ QP+A L++ G+K +E R P + + + IH A K E+ + ME
Sbjct: 4 PCLSFRQPYAGLILNGVKTLETRWRPLLSSVQKYTIAIHIAHKDWEDDEWQEVLMERLGM 63
Query: 68 EIYAVNGITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQTDFCWL-- 125
+ T LQ + Y + G +++ +C E + E E V LE Q L
Sbjct: 64 TWTQIQ--TLLQAGEKYGRGVIAGLIDIGETFQCPETLTAE---EAVELETQAVLTNLQL 118
Query: 126 -----CENPQKLLVPFEMRGYQGVYNLE 148
NP+ LL P +G + ++ ++
Sbjct: 119 KYLTQVSNPRWLLEPIPRKGGKDIFQVD 146
>sp|Q68FD9|K1549_MOUSE UPF0606 protein KIAA1549 OS=Mus musculus GN=Kiaa1549 PE=1 SV=3
Length = 1940
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 120 TDFCWLCENPQKLLVP--FEMRGYQGVYNLEKKVYEAAVRG--LTPVKGPLPVKFPLPDA 175
T FC ++ +K LV FE+R +QG YNL ++ + + P +GP+ + F + +
Sbjct: 1049 TGFCNFTQSIEKGLVTALFEVRKHQGTYNLTVQIVNVTIASSRVAPRRGPVNIIFAVKGS 1108
Query: 176 Q 176
Q
Sbjct: 1109 Q 1109
>sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containing protein 2 OS=Homo
sapiens GN=PNPLA2 PE=1 SV=1
Length = 504
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 155 AVRGLTPVKGPLPVKFPLPDAQDPFSLKPGSMSTNF-PENKSTAVEKSSTLNAAIAGARA 213
+++G+ V G + PL + ++ ++ P S ++ P++ ST + + N +I
Sbjct: 158 SLQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSSTNIHELRVTNTSI----- 212
Query: 214 AATQFNKKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSAL 259
QFN +N L+ + +P LR K+ DG F Q L
Sbjct: 213 ---QFNLRNLYRLSKALFPPEPLVLREMCKQGYRDGLRFLQRNGLL 255
>sp|Q2KI18|PLPL2_BOVIN Patatin-like phospholipase domain-containing protein 2 OS=Bos
taurus GN=PNPLA2 PE=2 SV=1
Length = 486
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 155 AVRGLTPVKGPLPVKFPLPDAQDPFSLKPGSMSTNF-PENKSTAVEKSSTLNAAIAGARA 213
+++G+ V G + PL + ++ ++ P S ++ P++ ST + + N +I
Sbjct: 158 SLQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSSTNIHELRVTNTSI----- 212
Query: 214 AATQFNKKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAF 252
QFN +N L+ + +P LR K+ DG F
Sbjct: 213 ---QFNLRNLYRLSKALFPPEPLVLREMCKQGYRDGLRF 248
>sp|Q5RCT4|CSRP1_PONAB Cysteine and glycine-rich protein 1 OS=Pongo abelii GN=CSRP1 PE=2
SV=3
Length = 193
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 220 KKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSALA-ENGERNLIEHEESSSH 276
KKN D T + E+ Y KK G + QG L+ + GE I+HEES H
Sbjct: 41 KKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEESPGH 98
>sp|Q8BJ56|PLPL2_MOUSE Patatin-like phospholipase domain-containing protein 2 OS=Mus
musculus GN=Pnpla2 PE=1 SV=1
Length = 486
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 24/139 (17%)
Query: 156 VRGLTPVKGPLPVKFPLPDAQDPFSLKPGSMSTNF-PENKSTAVEKSSTLNAAIAGARAA 214
++G+ V G + PL + ++ ++ P S ++ P++ ST + + N +I
Sbjct: 159 LQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSSTNIHELRVTNTSI------ 212
Query: 215 ATQFNKKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAF-------NQGTSALA------- 260
QFN +N L+ + +P LR K+ DG F NQ LA
Sbjct: 213 --QFNLRNLYRLSKALFPPEPMVLREMCKQGYRDGLRFLRRNGLLNQPNPLLALPPVVPQ 270
Query: 261 -ENGERNLIEHEESSSHDQ 278
E+ E + E + DQ
Sbjct: 271 EEDAEEAAVVEERAGEEDQ 289
>sp|P43597|YFI6_YEAST Uncharacterized protein YFR016C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YFR016C PE=1 SV=1
Length = 1233
Score = 33.5 bits (75), Expect = 2.2, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 195 STAVEKSSTLNAAIAGARAAATQFNKKNQDLLTNVMQDEK------PYALRSGSKKKSSD 248
+T + K STL++ + G + KN+D+ N++QDE R+ S K+ D
Sbjct: 207 TTDLSKQSTLDSILVGIEEYLQEDGSKNEDIKVNIVQDEPVNVEKMDIRTRNESSDKTFD 266
Query: 249 GDAFNQGTSALAENGERNLIEHEESSSHDQPR 280
D N+ + N I +EE + H PR
Sbjct: 267 IDVPNKDNVDETSSKSENNI-NEEKAEHTLPR 297
>sp|A4FPL8|RL16_SACEN 50S ribosomal protein L16 OS=Saccharopolyspora erythraea (strain
NRRL 23338) GN=rplP PE=3 SV=1
Length = 139
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 165 PLPVKFPLPDAQDPFSLKPGSMSTNFPENKSTAVEKSSTLNAAIAGARAAATQFNKKNQD 224
P VK+ A G NF E A+E N I AR A T+ K+
Sbjct: 4 PRRVKWRKSHAPKRKGFAKGGTRINFGEYGIQAIEHGYVTNRQIESARIAITRHVKRGGK 63
Query: 225 LLTNVMQD----EKPYALRSGSKKKSSD 248
+ N+ D +KP R GS K S +
Sbjct: 64 VWINIFPDRPLTKKPAETRQGSGKGSPE 91
>sp|P0C548|PLPL2_RAT Patatin-like phospholipase domain-containing protein 2 OS=Rattus
norvegicus GN=Pnpla2 PE=2 SV=1
Length = 478
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 156 VRGLTPVKGPLPVKFPLPDAQDPFSLKPGSMSTNF-PENKSTAVEKSSTLNAAIAGARAA 214
++G+ V G + PL + ++ ++ P S ++ P++ ST + + N +I
Sbjct: 159 LQGVRYVDGGISDNLPLYELKNTITVSPFSGESDICPQDSSTNIHELRITNTSI------ 212
Query: 215 ATQFNKKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAF 252
QFN +N L+ + +P LR K+ DG F
Sbjct: 213 --QFNLRNLYRLSKALFPPEPMVLREMCKQGYRDGLRF 248
>sp|P21291|CSRP1_HUMAN Cysteine and glycine-rich protein 1 OS=Homo sapiens GN=CSRP1 PE=1
SV=3
Length = 193
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 220 KKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSALA-ENGERNLIEHEESSSH 276
KKN D T + E+ Y KK G + QG L+ + GE I+HEE+ H
Sbjct: 41 KKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGH 98
>sp|P47875|CSRP1_RAT Cysteine and glycine-rich protein 1 OS=Rattus norvegicus GN=Csrp1
PE=2 SV=2
Length = 193
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 220 KKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSALA-ENGERNLIEHEESSSH 276
KKN D T + E+ Y KK G + QG L+ + GE I+HEE+ H
Sbjct: 41 KKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIKHEEAPGH 98
>sp|P97315|CSRP1_MOUSE Cysteine and glycine-rich protein 1 OS=Mus musculus GN=Csrp1 PE=1
SV=3
Length = 193
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 220 KKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSALA-ENGERNLIEHEESSSH 276
KKN D T + E+ Y KK G + QG L+ + GE I+HEE+ H
Sbjct: 41 KKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGH 98
>sp|Q3MHY1|CSRP1_BOVIN Cysteine and glycine-rich protein 1 OS=Bos taurus GN=CSRP1 PE=2
SV=3
Length = 193
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 220 KKNQDLLTNVMQDEKPYALRSGSKKKSSDGDAFNQGTSALA-ENGERNLIEHEESSSH 276
KKN D T + E+ Y KK G + QG L+ + GE I HEE+ H
Sbjct: 41 KKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIRHEEAPGH 98
>sp|A7MB11|TGFA1_BOVIN Transforming growth factor-beta receptor-associated protein 1
OS=Bos taurus GN=TGFBRAP1 PE=2 SV=1
Length = 859
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 57 ATIKAMEEFYREIYAVNGITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRL 116
AT A + +R + +++L+ +SRLL + GC+ + S E VP G R+
Sbjct: 61 ATFTATRQLHRHLGFKKAVSELRAAS--ALSRLLVLCD--GCISLVHMLSLEPVPSGARI 116
Query: 117 EAQTDFCWLCENP 129
+ T F L ENP
Sbjct: 117 KGATAFA-LNENP 128
>sp|Q1W1Y5|PELP1_MACMU Proline-, glutamic acid- and leucine-rich protein 1 OS=Macaca
mulatta GN=PELP1 PE=2 SV=1
Length = 1130
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 208 IAGARAAATQFNKKNQDLLTNVMQDEKP--YALRSGSKKKSSDGDAFNQGTSALAENGER 265
+ GA A Q + LLT+++ D P AL+ S + S DG + G + + +
Sbjct: 441 VCGASAGMLQGGASGEALLTHLLSDISPPADALKLRSPRGSPDG-SLQTGKPSAPKKLKL 499
Query: 266 NLIEHEESSSHDQPRGQLKQDPGAPSRIFAAAVKGLK 302
++ E SH K D A S + AAA+KGL
Sbjct: 500 DVAEAMAPPSHR------KGDSNANSDVCAAALKGLS 530
>sp|Q56B11|PELP1_RAT Proline-, glutamic acid- and leucine-rich protein 1 OS=Rattus
norvegicus GN=Pelp1 PE=2 SV=2
Length = 1130
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 208 IAGARAAATQFNKKNQDLLTNVMQDEKP--YALRSGSKKKSSDGDAFNQGTSALAENGER 265
+ GA A Q + LLT+++ D P AL+ S + SSDG G + + +
Sbjct: 442 VCGASAGMLQGGASGEALLTHLLSDISPPADALKLCSTRGSSDG-GLQSGKPSAPKKLKL 500
Query: 266 NLIEHEESSSHDQPRGQLKQDPGAPSRIFAAAVKGLK 302
++ E P Q K D A S + AAA++GL
Sbjct: 501 DMGEAL------APPSQRKGDRNADSDVCAAALRGLS 531
>sp|Q9DBD5|PELP1_MOUSE Proline-, glutamic acid- and leucine-rich protein 1 OS=Mus musculus
GN=Pelp1 PE=1 SV=2
Length = 1123
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 208 IAGARAAATQFNKKNQDLLTNVMQDEKP--YALRSGSKKKSSDGDAFNQGTSALAENGER 265
+ GA A Q + LLT+++ D P AL+ S + SSDG G + + +
Sbjct: 442 VCGASAGMLQGGASGEALLTHLLSDISPPADALKLCSTRGSSDG-GLQSGKPSAPKKLKL 500
Query: 266 NLIEHEESSSHDQPRGQLKQDPGAPSRIFAAAVKGLK 302
++ E P Q K D A S + AAA++GL
Sbjct: 501 DMGEAL------APPSQRKGDRNANSDVCAAALRGLS 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,098,062
Number of Sequences: 539616
Number of extensions: 4717954
Number of successful extensions: 12678
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 12655
Number of HSP's gapped (non-prelim): 58
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)