Your job contains 1 sequence.
>036175
MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPG
FANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQK
GLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEE
FDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKH
DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQT
QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG
V
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036175
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184822 - symbol:AT5G09460 species:3702 "Arabi... 373 2.2e-34 1
TAIR|locus:2173433 - symbol:SAC51 "SUPPRESSOR OF ACAULIS ... 286 3.6e-25 1
TAIR|locus:2170111 - symbol:AT5G50010 species:3702 "Arabi... 118 1.5e-08 2
UNIPROTKB|Q75KP4 - symbol:OSJNBa0065F09.5 "Expressed prot... 142 5.7e-08 2
UNIPROTKB|Q6Z861 - symbol:P0572D06.2 "cDNA clone:002-118-... 119 3.5e-05 2
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 115 0.00015 1
UNIPROTKB|Q75H21 - symbol:OSJNBa0027H16.21 "Putative unch... 113 0.00022 2
TAIR|locus:2198253 - symbol:AT1G29950 species:3702 "Arabi... 101 0.00035 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 116 0.00076 1
>TAIR|locus:2184822 [details] [associations]
symbol:AT5G09460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL391712 SUPFAM:SSF47459
EMBL:AY128339 EMBL:BT000009 IPI:IPI00545551 RefSeq:NP_196508.1
UniGene:At.20593 ProteinModelPortal:Q9FY69 SMR:Q9FY69
EnsemblPlants:AT5G09460.1 GeneID:830805 KEGG:ath:AT5G09460
TAIR:At5g09460 eggNOG:NOG309822 HOGENOM:HOG000090494
InParanoid:Q9FY69 OMA:ISSKQET PhylomeDB:Q9FY69
ProtClustDB:CLSN2686255 Genevestigator:Q9FY69 Uniprot:Q9FY69
Length = 326
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 125/334 (37%), Positives = 173/334 (51%)
Query: 28 LDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQNLV 87
LD +Q + LP + P+ + + A Y PG + ++ A + L P FQ L+
Sbjct: 3 LDTKQQKWLPLGLNPQACV--QDKATE-YFRPGIPFPELGKVYAAEHQFRYLQPPFQALL 59
Query: 88 ASPYPYLNEIQPAFPC--GFSEQ-AAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVL 144
S Y C G S AAP L S +K +VFDQSG QT+L+ C L
Sbjct: 60 -SRYDQ-QSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQSGEQTRLLQ---CGFPL 114
Query: 145 NTPATLKKEV-SVNGFLQ-DKAIKRDQFTSVKPLLHEEFDENHISGKE-CEMHEDTEEIN 201
P+++ E ++ G L +K +D K L HE+ H +G+E EMHEDTEEIN
Sbjct: 115 RFPSSMDAERGNILGALHPEKGFSKDHAIQEKILQHED----HENGEEDSEMHEDTEEIN 170
Query: 202 ALLXXXXXXXXXXXXXXXXXXVKSTDHSPVAIEGKYEKHDLTLEISEEVASS-DGPN-KR 259
ALL V ST HSP +E + ++T E +E S+ DGP KR
Sbjct: 171 ALLYSDDDDNDDWESDDE---VMSTGHSPFTVE--QQACNITTEELDETESTVDGPLLKR 225
Query: 260 QKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKI 319
QKLL+ Y SS + + +++G + +N ES ++ K+E L + QSRKDKI
Sbjct: 226 QKLLDHSYRDSSPSLVG-TTKVKGLSD-ENLPESNISS----KQETGSGLSDEQSRKDKI 279
Query: 320 HTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
HTALRIL+ ++PGA GK+ L LLDEAIDYL+ LK
Sbjct: 280 HTALRILESVVPGAKGKEALLLLDEAIDYLKLLK 313
>TAIR|locus:2173433 [details] [associations]
symbol:SAC51 "SUPPRESSOR OF ACAULIS 51" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009826 "unidimensional cell
growth" evidence=IMP] [GO:0000271 "polysaccharide biosynthetic
process" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009932 "cell
tip growth" evidence=RCA] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048519 "negative regulation of biological process"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] PROSITE:PS50888
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009826 EMBL:AB008268
HOGENOM:HOG000090494 ProtClustDB:CLSN2686255 UniGene:At.49218
UniGene:At.71062 EMBL:AY062561 EMBL:AY093333 IPI:IPI00540184
RefSeq:NP_201239.1 ProteinModelPortal:Q9FMF4 SMR:Q9FMF4
STRING:Q9FMF4 PRIDE:Q9FMF4 EnsemblPlants:AT5G64340.1 GeneID:836555
KEGG:ath:AT5G64340 TAIR:At5g64340 eggNOG:NOG247392
InParanoid:Q9FMF4 OMA:TESEMHE PhylomeDB:Q9FMF4
Genevestigator:Q9FMF4 Uniprot:Q9FMF4
Length = 348
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 83/201 (41%), Positives = 105/201 (52%)
Query: 165 IKRDQFTSVKPLLHEEFDENHIS-GKECEMHEDTEEINALLXXXXXXXXXXXXXXXXXXV 223
+K + ++ E+ +E H S G E EMHEDTEEINALL V
Sbjct: 130 VKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDE---V 186
Query: 224 KSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLL---NGGYNKSSQTDTACSVQ 280
ST HSP EG K +L EE+ DGP KRQKLL N + SS T S Q
Sbjct: 187 MSTGHSPYPNEGVCNKREL-----EEI---DGPCKRQKLLDKVNNISDLSSLVGTESSTQ 238
Query: 281 LEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLS 340
L GS D + + + KE+ L N QS+KDKI TAL+IL+ ++PGA G + L
Sbjct: 239 LNGSSFL-KDKKLPESKTISTKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALL 297
Query: 341 LLDEAIDYLQSLKLKAVALGV 361
LLDEAIDYL+ LK ++ V
Sbjct: 298 LLDEAIDYLKLLKRDLISTEV 318
Score = 175 (66.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 89/305 (29%), Positives = 128/305 (41%)
Query: 28 LDPRQPECLPSLIAPENYM--FSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQN 85
LD RQ + LP ++P+ + LP P L ++ + LQ PP FQ+
Sbjct: 3 LDKRQRD-LPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQA--RCLQ--PPPFQS 57
Query: 86 LVAS----PYP--YLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSV 139
L+ S Y + ++ + P L S QK LL+FDQSG+QT+L+
Sbjct: 58 LLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRLLIFDQSGDQTRLLQ--- 114
Query: 140 CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHIS-GKECEMHEDTE 198
CP L P+ E +K + ++ E+ +E H S G E EMHEDTE
Sbjct: 115 CPFPLRFPSHAAAE----------PVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTE 164
Query: 199 EINALLXXXXXXXXXXXXXXXXXXVKSTDHSPVAIEGKYEKHDLTLEISEEVASS---DG 255
EINALL V ST HSP EG K +L EI D
Sbjct: 165 EINALLYSDDDYDDDCESDDE---VMSTGHSPYPNEGVCNKRELE-EIDGPCKRQKLLDK 220
Query: 256 PNKRQKLLN-GGYNKSSQTDTACSVQ---LEGSHECDN--DAESGYANGQTQKEEIDFIL 309
N L + G S+Q + + ++ L S D SG +N Q++K++I L
Sbjct: 221 VNNISDLSSLVGTESSTQLNGSSFLKDKKLPESKTISTKEDTGSGLSNEQSKKDKIRTAL 280
Query: 310 GNMQS 314
++S
Sbjct: 281 KILES 285
>TAIR|locus:2170111 [details] [associations]
symbol:AT5G50010 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0048446 "petal morphogenesis" evidence=RCA]
PROSITE:PS50888 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000090494 EMBL:AB026650 EMBL:AK117155 EMBL:BT005301
IPI:IPI00533787 RefSeq:NP_199812.1 UniGene:At.49153
ProteinModelPortal:Q9FGB0 SMR:Q9FGB0 IntAct:Q9FGB0
EnsemblPlants:AT5G50010.1 GeneID:835065 KEGG:ath:AT5G50010
TAIR:At5g50010 eggNOG:NOG323283 InParanoid:Q9FGB0 OMA:RDAESSC
PhylomeDB:Q9FGB0 ProtClustDB:CLSN2916599 Genevestigator:Q9FGB0
Uniprot:Q9FGB0
Length = 311
Score = 118 (46.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 281 LEGSHECDNDAESGYANGQTQKEEIDFIL-GNMQSRK---DKIHTALRILQGIIPGANGK 336
LE S+E DAES G I F+ + S K +KI + +L+ ++PG
Sbjct: 229 LETSNESMRDAESSC--GSCDNTRISFLKRSKLSSNKIGEEKIFETVSLLRSVVPGEELV 286
Query: 337 DPLSLLDEAIDYLQSLKLKA 356
DP+ ++D AIDYL+SLK++A
Sbjct: 287 DPILVIDRAIDYLKSLKMEA 306
Score = 78 (32.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 43/138 (31%), Positives = 64/138 (46%)
Query: 69 INGA-HKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQ 127
++G+ H Q LPP+ Q + P I A EQ + QK LVFDQ
Sbjct: 68 VHGSSHLQQQFLPPQNQCMKQVPLQVDGVISKA-----EEQCS--------QKRFLVFDQ 114
Query: 128 SGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHIS 187
SG+QT L+ +S + + TLK+ + +K + S K L F + +
Sbjct: 115 SGDQTTLLLAS---DIRKSFETLKQHACPD-------MKEELQRSNKDL----FVCHGMQ 160
Query: 188 GK-ECEMHEDTEEINALL 204
G E ++ ED+EE+NALL
Sbjct: 161 GNSEPDLKEDSEELNALL 178
>UNIPROTKB|Q75KP4 [details] [associations]
symbol:OSJNBa0065F09.5 "Expressed protein (With alternative
splicing)" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 EMBL:AC099323 EMBL:AK065674
RefSeq:NP_001050282.1 UniGene:Os.59384
EnsemblPlants:LOC_Os03g27390.1 EnsemblPlants:LOC_Os03g27390.2
GeneID:4333025 KEGG:osa:4333025 OMA:SARPDHS ProtClustDB:CLSN2693978
Uniprot:Q75KP4
Length = 315
Score = 142 (55.0 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 72/250 (28%), Positives = 112/250 (44%)
Query: 137 SSVCPSV-LNTPATLKKEVSV------NGFLQDKAIKRDQFTSVKPLL-HEEFDENHISG 188
+++ PSV L+T TL+K V N F + + +V L E + +
Sbjct: 77 TTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPELQGSNETNVTDVGA 136
Query: 189 KECE-MHEDTEEINALLXXXXXXXXXXXXXXXXXXVKSTDHSPVAIEGKYEKHDLTLEIS 247
+ E MHE+TEEI+ALL V+ ++ KY + T+ +
Sbjct: 137 QNTECMHENTEEIDALLCSDSDEGCLK--------VQELNNRV----RKYPMQNDTMSV- 183
Query: 248 EEVASSDG--PNKRQKLLNGGYNKSSQTDTACSV-------QLEGSHE------CDNDAE 292
E VAS+ P K+++L +G S DTA S Q SH+ C + E
Sbjct: 184 ESVASAGASQPAKKRRLSSG--TDRSVVDTASSARPDHSVDQKHLSHDDDAQSCCIGEVE 241
Query: 293 SGYANGQTQKEEIDFILG--NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
S + + EE + G + + R+++I + L+ I+PG KD ++LDEAI YL+
Sbjct: 242 SDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLK 301
Query: 351 SLKLKAVALG 360
LKLK LG
Sbjct: 302 YLKLKVKTLG 311
Score = 45 (20.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 8 WIYRQHSAWQLPDLNCMR---TSLDPRQPECLPSLIAPENYMFSANAA 52
W + + W N + SLD LP+ + + Y++S AA
Sbjct: 8 WCHWSNPPWTESSANNLHPPDVSLDNTNSVALPTYLNSDGYIYSGVAA 55
>UNIPROTKB|Q6Z861 [details] [associations]
symbol:P0572D06.2 "cDNA clone:002-118-A09, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139
ProtClustDB:CLSN2688090 EMBL:AP004798 EMBL:AK102703 EMBL:AK106848
EMBL:AK107002 RefSeq:NP_001046664.1 UniGene:Os.49098
EnsemblPlants:LOC_Os02g21090.1 EnsemblPlants:LOC_Os02g21090.2
EnsemblPlants:LOC_Os02g21090.3 GeneID:4329144 KEGG:osa:4329144
eggNOG:NOG323253 Uniprot:Q6Z861
Length = 254
Score = 119 (46.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 294 GYANGQTQKEEIDFILGNMQSR----KDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
GY +G + G Q+R K+++ +R L+GIIPG N D ++LDEA+ YL
Sbjct: 178 GYRDGSSPDSTCSSSYGGGQARPGRKKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYL 237
Query: 350 QSLKLKAVALGV 361
+SLK++ LGV
Sbjct: 238 KSLKVEVKKLGV 249
Score = 40 (19.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 195 EDTEEINALL 204
EDT+EI+ALL
Sbjct: 151 EDTDEIDALL 160
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 293 SGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
SG + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL+
Sbjct: 81 SGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLK 140
Query: 351 SLKLKAVALGV 361
L+L+ L V
Sbjct: 141 QLQLQVQTLAV 151
>UNIPROTKB|Q75H21 [details] [associations]
symbol:OSJNBa0027H16.21 "Putative uncharacterized protein
OSJNBa0027H16.21" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238091 EMBL:AC137921
ProteinModelPortal:Q75H21 Gramene:Q75H21 Uniprot:Q75H21
Length = 384
Score = 113 (44.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 238 EKHDLTLEISEEVASSDGPNKRQKLLNG---GYNKSSQTDTACSVQLEGSHECDNDAESG 294
+K D T EI +++ DG + L G G D+ CS S +C
Sbjct: 148 QKED-TDEIDALMSTEDGEEEDDVLSTGRTPGCRAGGSPDSTCSSGASRS-DC------- 198
Query: 295 YANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKL 354
G +K E G + +K+++ +R L+GIIPG + D ++LDEA+ YL+SLK+
Sbjct: 199 ---GGGRKPEA----GGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKV 251
Query: 355 KAVALG 360
+ LG
Sbjct: 252 EVKKLG 257
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 120 KGLLVFDQSGNQTQLVYS-SVCPSVLNTPATLKKE--VSVNGFLQDKAIKRDQFTSVKPL 176
K ++FDQ+ +++++++ S+ ++ N+ GF QD A K + V+
Sbjct: 81 KNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYGGFEQDYASK-SAYYGVE-- 137
Query: 177 LHEEFDENHISGKECEMHEDTEEINALL 204
D+ G EDT+EI+AL+
Sbjct: 138 -----DDGG-GGCSIRQKEDTDEIDALM 159
>TAIR|locus:2198253 [details] [associations]
symbol:AT1G29950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC008030 EMBL:AC022455 EMBL:AF361607 EMBL:AY074843
EMBL:AK175631 EMBL:AK230374 IPI:IPI00532385 PIR:C86423
RefSeq:NP_564342.1 RefSeq:NP_973937.1 UniGene:At.43371
ProteinModelPortal:Q9ASX9 SMR:Q9ASX9 EnsemblPlants:AT1G29950.1
EnsemblPlants:AT1G29950.2 GeneID:6240759 GeneID:839873
KEGG:ath:AT1G29950 KEGG:ath:AT1G29951 TAIR:At1g29950
eggNOG:NOG300108 HOGENOM:HOG000238091 InParanoid:Q9ASX9 OMA:PNEIDAL
PhylomeDB:Q9ASX9 ProtClustDB:CLSN2688090 Genevestigator:Q9ASX9
Uniprot:Q9ASX9
Length = 251
Score = 101 (40.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLE-GSHECDNDAES-GYANG 298
D L E+ +D N+ ++ +GG S + TA + + G+ ++ S GY N
Sbjct: 121 DALLSADEDYEENDD-NEGEE--DGG--DSEEVSTARTSSRDYGNTTAESCCSSYGYNNN 175
Query: 299 QTQKEEIDFILGNMQSRKD------KIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
+ G+ S + K+ + +L+ I+PG + +LDEA+ YL+SL
Sbjct: 176 NNNNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSL 235
Query: 353 KLKAVALGV 361
K++A LGV
Sbjct: 236 KIEAQKLGV 244
Score = 51 (23.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 120 KGLLVFDQSGNQTQLVYS-SVCPSVLNTPA 148
K ++FDQ+ +++Q++Y + ++NTP+
Sbjct: 53 KNFVIFDQTYDRSQVMYHPELTHKLMNTPS 82
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 252 SSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYAN-GQTQKEEIDFILG 310
S DGP++ L + + Q D C + D E+G + G K +
Sbjct: 290 SLDGPSESPSLSLKRKHSNIQ-DIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVH 348
Query: 311 NMQSRK--DKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
N+ R+ D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 349 NLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQ 395
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 343 0.00096 116 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 612 (65 KB)
Total size of DFA: 242 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.08u 0.08s 31.16t Elapsed: 00:00:03
Total cpu time: 31.08u 0.08s 31.16t Elapsed: 00:00:03
Start: Sat May 11 03:31:37 2013 End: Sat May 11 03:31:40 2013