BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036175
(361 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224093318|ref|XP_002309879.1| predicted protein [Populus trichocarpa]
gi|222852782|gb|EEE90329.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/365 (45%), Positives = 206/365 (56%), Gaps = 42/365 (11%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPG 60
MVKA SW++ S WQ P+ N M TSLDP Q +CLP+ + P YM SAN ++PG P
Sbjct: 1 MVKAEGSWLFPPLSTWQSPNFNRMTTSLDPAQLQCLPACMNPGTYMTSANMSMPGLAVPS 60
Query: 61 FANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQK 120
N +T+Q N + LPP FQN + PY+ E F G PN +G Q+
Sbjct: 61 IPNFETQQGNETYGLPPCLPPHFQNFLPGTNPYVKENLSVFSYGLGRGGVPNPIVGC-QR 119
Query: 121 GLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEE 180
+FDQSGN+ +L+YSS +V K + ++ A K DQ +K LHE
Sbjct: 120 RFFIFDQSGNEKRLMYSSFGLTVPKPTTADAKPIPGYFNYKEYAAKMDQ---MKLKLHEV 176
Query: 181 FDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKH 240
DENH SG+E EMHEDTEEINA G E+
Sbjct: 177 SDENHFSGEETEMHEDTEEINA-------------------------------HGTQEQV 205
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDN----DAESGYA 296
+ EI+EEV SSDGPNKRQKL++GGY KSS DTA SV++E DN D S YA
Sbjct: 206 E---EITEEVTSSDGPNKRQKLIDGGYKKSSPVDTASSVKVERFLGYDNGYDSDMGSSYA 262
Query: 297 NGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
GQTQKE + ILG+ Q RKDKIH L+IL+ IIPGA K+PL +LDEAI+YL+SLKLKA
Sbjct: 263 IGQTQKEGMVSILGSKQFRKDKIHATLKILESIIPGAKNKEPLLVLDEAINYLKSLKLKA 322
Query: 357 VALGV 361
LGV
Sbjct: 323 KTLGV 327
>gi|255563232|ref|XP_002522619.1| transcription factor, putative [Ricinus communis]
gi|223538095|gb|EEF39706.1| transcription factor, putative [Ricinus communis]
Length = 394
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 217/366 (59%), Gaps = 22/366 (6%)
Query: 3 KAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIA---PENYMFSANAALPGYVSP 59
+A+ SW++ H W+L D NCM TS++P QP CLP+ ++ P N M +P P
Sbjct: 41 QANNSWLFPPHETWELSDFNCMSTSVEPVQPGCLPAFVSHGTPTNMM------MPRISVP 94
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQ 119
+ +L+T+Q GA Q P F ++ + Y E PAF GFS ++A N + + Q
Sbjct: 95 TYPSLRTQQSTGAQGLPQSKAPPFHQVLPAIDSYPKESLPAFNYGFSGESALN-AVPACQ 153
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFL--QDKAIKRDQFTSVKPLL 177
+ ++FDQSGN+T+L+YSS P+ P + +L ++ A K D + P L
Sbjct: 154 RKFVIFDQSGNETRLIYSSFFPTGAK-PTIAASRPTAGSYLRSEEHAAKLDGINLIMPKL 212
Query: 178 HEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKY 237
E DEN+ SG+E EMHEDTEEI+ALLYSD N DD +DDEV ST HSP I Y
Sbjct: 213 QEVSDENYFSGEESEMHEDTEEIDALLYSD-----DNDDDYDDDEVISTGHSPSLIR-NY 266
Query: 238 EKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSH--ECDNDAESGY 295
EI+EEV SDG NKRQKLL+GGY +SS TDTA S ++ +H +CD DAES
Sbjct: 267 GMRGQVEEITEEVTDSDGQNKRQKLLDGGYKRSSLTDTAGSTKVAMAHGYDCD-DAESSC 325
Query: 296 ANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
A GQ KE LG Q +KDKI L+IL+ IIPG KDPL +LD AIDYL+SLKL
Sbjct: 326 AIGQNHKELRLANLGKEQLKKDKIRATLKILESIIPGVKDKDPLLVLDVAIDYLKSLKLS 385
Query: 356 AVALGV 361
A LGV
Sbjct: 386 AKTLGV 391
>gi|147836191|emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 196/361 (54%), Gaps = 12/361 (3%)
Query: 7 SWIYRQHSAWQLPDLNCMRT--SLDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANL 64
SW+ QH W PDLN + L+ Q + + + P + + +L + +
Sbjct: 45 SWLPHQHPGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHS 104
Query: 65 KTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQA-APNEKLGSLQKGLL 123
+ Q N H LP Q + L E PA P G S APN QK L
Sbjct: 105 RPSQPNEPHGWFYCLPRFRQAFTHASNSILKEKLPAGPYGNSRVVNAPNVISECAQKRFL 164
Query: 124 VFDQSGNQTQLVYSSV--CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEF 181
VFDQSG+QT LV+SSV P T + K + N ++ KRD P+L +E
Sbjct: 165 VFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDES 224
Query: 182 DENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHD 241
+EN + + EMHEDTEE+NALLYSD D+YS SEDDE ST HSP + Y++ +
Sbjct: 225 NENGGTDVQSEMHEDTEELNALLYSD--DEYSY---SEDDEETSTGHSPSTMT-VYDRQE 278
Query: 242 LTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQT- 300
+EEVASSDG NKR+KL NG +N S DTA S + + S E ++DAES A+G
Sbjct: 279 WLEGEAEEVASSDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNP 338
Query: 301 QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
+ EI GN +SRKD+I + ILQ +IPG GKD + +LDEAI YL+SLKLKA ALG
Sbjct: 339 EPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALG 398
Query: 361 V 361
+
Sbjct: 399 L 399
>gi|359492922|ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 198/367 (53%), Gaps = 12/367 (3%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRT--SLDPRQPECLPSLIAPENYMFSANAALPGYVS 58
M K SW+ QH W PDLN + L+ Q + + + P + + +L +
Sbjct: 58 MEKDCGSWLPHQHPGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTF 117
Query: 59 PGFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQA-APNEKLGS 117
+ + Q N H LP Q + L E PA P G S APN
Sbjct: 118 SVLPHSRPSQPNEPHGWFYCLPRFRQAFTHASNSILKEKLPAGPYGNSRVVNAPNVISEC 177
Query: 118 LQKGLLVFDQSGNQTQLVYSSV--CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKP 175
QK LVFDQSG+QT LV+SSV P T + K + N ++ KRD P
Sbjct: 178 AQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGP 237
Query: 176 LLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEG 235
+L +E +EN + + EMHEDTEE+NALLYSD D+YS SEDDE ST HSP +
Sbjct: 238 ILTDESNENGGTDVQSEMHEDTEELNALLYSD--DEYSY---SEDDEETSTGHSPSTMT- 291
Query: 236 KYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGY 295
Y++ + +EEVASSDG NKR+KL NG +N S DTA S + + S E ++DAES
Sbjct: 292 VYDRQEWLEGEAEEVASSDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSC 351
Query: 296 ANGQT-QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKL 354
A+G + EI GN +SRKD+I + ILQ +IPG GKD + +LDEAI YL+SLKL
Sbjct: 352 ADGNNPEPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKL 411
Query: 355 KAVALGV 361
KA ALG+
Sbjct: 412 KAKALGL 418
>gi|449438759|ref|XP_004137155.1| PREDICTED: transcription factor bHLH143-like [Cucumis sativus]
gi|169219253|gb|ACA50447.1| putative transcription factor [Cucumis sativus]
Length = 354
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 199/370 (53%), Gaps = 27/370 (7%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFS-ANAALPGYVSP 59
MV S + +H AWQL + N M S++ +Q E + I EN +FS + + P
Sbjct: 1 MVGTDNSRLDFEHFAWQLHNYNSMNASIETKQQESCQTSINHENCIFSKCMGRMQRFAIP 60
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQP-----AFPCGFSEQAAPNEK 114
+ + EQ+N + L P FQN + Y NE + A P G + N
Sbjct: 61 PLPSFEVEQLNVIQGSRHCLSPHFQNSRGTFISYQNEKESMHYAHAGPSGMPVSKSNN-- 118
Query: 115 LGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVK 174
GS KG L+FDQSGNQ +L+Y+ +CP + T K G+L++K RD SVK
Sbjct: 119 -GSYPKGFLIFDQSGNQKRLMYAPMCPVYFPSIVTENK---CCGWLEEKGAVRD-INSVK 173
Query: 175 PLLHEEFDENHIS-GKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAI 233
+ +EN+++ G+ EMHE+TEEI+ALLYSD Y S DDEV ST HSP I
Sbjct: 174 YSPNTLSNENYVADGESSEMHENTEEIDALLYSD----YDGTGCSSDDEVTSTGHSPEMI 229
Query: 234 EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAES 293
EK + E + EVASSD P KRQ+L +GGY KS T ++E S NDAES
Sbjct: 230 NEHCEKEEQCQETTTEVASSDVPRKRQRLHDGGYIKSLPIATGSCARVE-SQNYANDAES 288
Query: 294 GYANGQTQKEE----IDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
+ G KEE IDF +KD+I LR+L+ ++PGA GKDPL ++DEAI+Y
Sbjct: 289 --SCGMVHKEEAGADIDFCY--CSCKKDRIEETLRVLESLVPGAKGKDPLLVIDEAINYF 344
Query: 350 QSLKLKAVAL 359
+ LK +++ L
Sbjct: 345 EVLKTRSLLL 354
>gi|449476429|ref|XP_004154734.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH143-like
[Cucumis sativus]
Length = 354
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 198/370 (53%), Gaps = 27/370 (7%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFS-ANAALPGYVSP 59
MV S + +H AWQL + N M S++ +Q E + I EN +FS + + P
Sbjct: 1 MVGTDNSRLDFEHFAWQLHNYNSMNASIETKQQESCQTSINHENCIFSKCMGRMQRFAIP 60
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQP-----AFPCGFSEQAAPNEK 114
+ + EQ+N + L P FQN + Y NE + A P G + N
Sbjct: 61 PLPSFEVEQLNVIQGSRHCLSPHFQNSRGTFISYQNEKESMHYAHAGPSGMPVSKSNN-- 118
Query: 115 LGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVK 174
GS KG L+FDQSGNQ +L+Y+ +CP + T K G+L++K RD SVK
Sbjct: 119 -GSYPKGFLIFDQSGNQKRLMYAPMCPVYFPSIVTENK---CCGWLEEKGAVRD-INSVK 173
Query: 175 PLLHEEFDENHIS-GKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAI 233
+ +EN+++ G+ EMHE+TEEI+ALLYSD Y S DDEV ST HSP I
Sbjct: 174 YSPNTLSNENYVADGESSEMHENTEEIDALLYSD----YDGTGCSSDDEVTSTGHSPEMI 229
Query: 234 EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAES 293
EK + E + EVASSD P KRQ+L +GGY KS T ++E S NDAES
Sbjct: 230 NEHCEKEEQCQETTTEVASSDVPRKRQRLHDGGYIKSLPIATGSCARVE-SQNYANDAES 288
Query: 294 GYANGQTQKEE----IDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
+ G KEE IDF KD+I LR+L+ ++PGA GKDPL ++DEAI+Y
Sbjct: 289 --SCGMVHKEEAGADIDFCY--CSCXKDRIEETLRVLESLVPGAKGKDPLLVIDEAINYF 344
Query: 350 QSLKLKAVAL 359
+ LK +++ L
Sbjct: 345 EVLKTRSLLL 354
>gi|449525822|ref|XP_004169915.1| PREDICTED: transcription factor bHLH143-like [Cucumis sativus]
Length = 360
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 199/361 (55%), Gaps = 22/361 (6%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPG 60
MVK +SW HSA LP+LNC L R +CL P+ + SA G S
Sbjct: 1 MVKTGDSWPQPGHSAGNLPNLNCTNELLKFRL-QCL----NPDTNVSSAQTEFWG-SSIH 54
Query: 61 FANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQK 120
+L EQ N ++ L P F + ++ P L E Q GF P+ ++
Sbjct: 55 HGSLNWEQKN-ENRLLHSFPSYFGTMPSNALPCLVEKQFDSSLGFGRMTIPDSNTEFPKR 113
Query: 121 GLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEE 180
++FDQ+GNQT ++YSS + P ++ + +G D+ L H++
Sbjct: 114 EFIIFDQTGNQTSVMYSSDTAQI---PISISTKNCSHGLNDDEEDAAGDIDLKNYLFHKD 170
Query: 181 FDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKH 240
++ I+G+E EMHEDT+EINALLYSD D+ Y + DDEV ST HSP I+ Y+K
Sbjct: 171 PLKSGIAGEESEMHEDTDEINALLYSDDDNHYIS-----DDEVTSTGHSPPLIKELYDKQ 225
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQT 300
E++EEVASSDGP KRQ++++GG+ K S+ SV+++ + D +S Y G +
Sbjct: 226 --IEEMNEEVASSDGPRKRQRMVDGGHKKLSEA--PVSVKVDALNNYRVDMKSSYTGGNS 281
Query: 301 QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
Q +D N S+KDK+ L++L+ ++PGA GK P+ ++DEAIDYL+SLK KA A+G
Sbjct: 282 QGHLMD---SNFSSKKDKLRETLKLLETMVPGAEGKHPMLVIDEAIDYLKSLKFKAKAMG 338
Query: 361 V 361
+
Sbjct: 339 L 339
>gi|449438234|ref|XP_004136894.1| PREDICTED: transcription factor bHLH143-like [Cucumis sativus]
Length = 360
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 199/361 (55%), Gaps = 22/361 (6%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPG 60
MVK +SW HSA LP+LNC L R +CL P+ + SA G S
Sbjct: 1 MVKTGDSWPQPGHSAGNLPNLNCTNELLKFRL-QCL----NPDTNVSSAQTEFWG-SSIH 54
Query: 61 FANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQK 120
+L EQ N ++ L P F + ++ P L E Q GF P+ ++
Sbjct: 55 HGSLNWEQKN-ENRLLHSFPSYFGTMHSNALPCLVEKQFDSSLGFGRMTIPDSNTEFPKR 113
Query: 121 GLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEE 180
++FDQ+GNQT ++YSS + P ++ + +G D+ L H++
Sbjct: 114 EFIIFDQTGNQTSVMYSSDTAQI---PISISTKNCSHGLNDDEEDAAGDIDLKNYLFHKD 170
Query: 181 FDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKH 240
++ I+G+E EMHEDT+EINALLYSD D+ Y + DDEV ST HSP I+ Y+K
Sbjct: 171 PLKSGIAGEESEMHEDTDEINALLYSDDDNHYIS-----DDEVTSTGHSPPLIKELYDKQ 225
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQT 300
E++EEVASSDGP KRQ++++GG+ K S+ SV+++ + D +S Y G +
Sbjct: 226 --IEEMNEEVASSDGPRKRQRMVDGGHKKLSEA--PVSVKVDALNNYRVDMKSSYTGGNS 281
Query: 301 QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
Q +D N S+KDK+ L++L+ ++PGA GK P+ ++DEAIDYL+SLK KA A+G
Sbjct: 282 QGHLMD---SNFSSKKDKLRETLKLLETMVPGAEGKHPMLVIDEAIDYLKSLKFKAKAMG 338
Query: 361 V 361
+
Sbjct: 339 L 339
>gi|224140751|ref|XP_002323742.1| predicted protein [Populus trichocarpa]
gi|222866744|gb|EEF03875.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 179/361 (49%), Gaps = 55/361 (15%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPG 60
MVKA SW+ HS +LP+ +CM TSLDP Q +CLP + P M SAN A+PG
Sbjct: 1 MVKAEGSWLSPPHSTRKLPNFHCMTTSLDPAQLQCLPECMNPGTRMTSANMAMPGLAVSS 60
Query: 61 FANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQK 120
N KT+Q N A+ Q LP FQN + + PY+ E F GF + N G Q+
Sbjct: 61 IPNFKTQQGNEAYGLPQCLPSNFQNFLHATNPYVRENLSVFSYGFGREGVRNPIPG-CQR 119
Query: 121 GLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEE 180
LVFDQSGN+ +L+YSS P V A K + + A K DQ +K L E
Sbjct: 120 RFLVFDQSGNEQRLIYSSFGPPVPKPTAADAKPIPGYFDHNEYAAKMDQTKLMK--LPEV 177
Query: 181 FDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKH 240
DENH + +E ++ E+ SDG + I+G Y+K
Sbjct: 178 SDENHFTSEEKKIIEEEGT-----SSDGPNKRQK-----------------LIDGGYKK- 214
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQT 300
SS DTA SV++E H D+D ES YA Q+
Sbjct: 215 -----------------------------SSLVDTASSVKVETFHGYDDDMESNYAKRQS 245
Query: 301 QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
Q E+ IL + Q RKDKI L+IL+ IIPGA K+PL +LDEAIDYL+SLKLKA LG
Sbjct: 246 QDGEMISILSSKQFRKDKIRATLKILESIIPGAKDKEPLLVLDEAIDYLKSLKLKAKTLG 305
Query: 361 V 361
V
Sbjct: 306 V 306
>gi|356557577|ref|XP_003547092.1| PREDICTED: transcription factor bHLH143-like [Glycine max]
Length = 406
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 189/367 (51%), Gaps = 43/367 (11%)
Query: 5 HESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANL 64
H SW Y QH AW P LNC TS +P + + + P +F A + PG+ +P N
Sbjct: 68 HRSWPYPQHVAWPSPYLNCSCTSAEPSS-QVHSAYMNPSTCIFPAVSVFPGFTAPALPNW 126
Query: 65 KTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLV 124
KTEQ N H Q P + PYL E + A N S QK LL+
Sbjct: 127 KTEQTNEVHGFHQY--PHSE-------PYLKETH-------TGGAMQNANHASFQKKLLI 170
Query: 125 FDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGF-LQDKAIKRDQ-----FTSVKPLLH 178
FD SG++T+++YS V V + T K V ++ +A Q +TS
Sbjct: 171 FDHSGSKTRMLYSPVFSLVQSPTVTATKFAQVYHVNMEAQATNMGQKHLPIYTSP----- 225
Query: 179 EEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
EE ++HI +E EMHEDTEEINALLYSD D +DDEV ST HSP+ + Y
Sbjct: 226 EETGKDHIDNEESEMHEDTEEINALLYSD---------DDDDDEVTSTGHSPLVTKRTYV 276
Query: 239 KHDLTLEISEEVASSDGPNKRQKLLNGGYNK-SSQTDTACSVQLEGSHECDNDAESGYAN 297
+ + +EVA SD PNKRQKL++ GYN D+A S +L E +DAES Y++
Sbjct: 277 MQEQFAGMKKEVAGSDWPNKRQKLIDSGYNTLPPLMDSASSERLNEMCEYASDAESKYSS 336
Query: 298 -----GQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
Q +E + ++Q +KDKI LR+L+ IPGA GK PL ++D I+YL+SL
Sbjct: 337 SGGVYAARQTKEDNPTPADIQLKKDKIRELLRVLENFIPGAKGKHPLLVIDGTIEYLKSL 396
Query: 353 KLKAVAL 359
+A L
Sbjct: 397 ASQAGTL 403
>gi|357445939|ref|XP_003593247.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355482295|gb|AES63498.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 344
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 190/368 (51%), Gaps = 34/368 (9%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPEC-LPSLIAPENYMFSANAALPGYVSP 59
MVKAHESW Q AW N R S DP C + P F A PG+ +P
Sbjct: 1 MVKAHESWPCPQPVAWPSLYSNGARMS-DPSL--CGYSAYPTPSTCTFPDVGAFPGFTAP 57
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQ 119
+L T+Q N LQ P+ + + + + PAF LQ
Sbjct: 58 ATPSLLTDQTNEEQGFLQ--DPKTEPCLKANNMAMQNANPAF----------------LQ 99
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDK-AIKRDQFTSVKPLLH 178
K ++FD+S +T+L YS V P V + T + Q++ A Q K L
Sbjct: 100 KKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAYDVNQERHATNFGQKHLPKYSLP 159
Query: 179 EEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
EE +++H+ +E EMHEDTEEINALL S + D +DDEV ST HSP+A E Y
Sbjct: 160 EESEQDHVVNEESEMHEDTEEINALLCS------DDYDSDDDDEVTSTGHSPLADERTYL 213
Query: 239 KHDLTLEISEEVASSDGPNKRQKLLNGGYNK-SSQTDTACSVQLEGSHECDNDAESGYAN 297
+ + E+ ASSD PNKR KL++GGY K S D+A SV+L EC DAES +++
Sbjct: 214 IQEQIEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNEPCECVRDAESKHSD 273
Query: 298 GQT----QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
GQ Q E+ +G++Q +KDKI LRIL+ + PGA GK PL ++DE IDYL+SL
Sbjct: 274 GQMYFARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDETIDYLKSLM 333
Query: 354 LKAVALGV 361
+ LGV
Sbjct: 334 SQTGMLGV 341
>gi|357445937|ref|XP_003593246.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355482294|gb|AES63497.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 426
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 190/368 (51%), Gaps = 34/368 (9%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMRTSLDPRQPEC-LPSLIAPENYMFSANAALPGYVSP 59
MVKAHESW Q AW N R S DP C + P F A PG+ +P
Sbjct: 83 MVKAHESWPCPQPVAWPSLYSNGARMS-DPSL--CGYSAYPTPSTCTFPDVGAFPGFTAP 139
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQ 119
+L T+Q N LQ P+ + + + + PAF LQ
Sbjct: 140 ATPSLLTDQTNEEQGFLQ--DPKTEPCLKANNMAMQNANPAF----------------LQ 181
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDK-AIKRDQFTSVKPLLH 178
K ++FD+S +T+L YS V P V + T + Q++ A Q K L
Sbjct: 182 KKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAYDVNQERHATNFGQKHLPKYSLP 241
Query: 179 EEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
EE +++H+ +E EMHEDTEEINALL S + D +DDEV ST HSP+A E Y
Sbjct: 242 EESEQDHVVNEESEMHEDTEEINALLCS------DDYDSDDDDEVTSTGHSPLADERTYL 295
Query: 239 KHDLTLEISEEVASSDGPNKRQKLLNGGYNK-SSQTDTACSVQLEGSHECDNDAESGYAN 297
+ + E+ ASSD PNKR KL++GGY K S D+A SV+L EC DAES +++
Sbjct: 296 IQEQIEDTEEDTASSDWPNKRHKLIDGGYTKLSPLVDSASSVRLNEPCECVRDAESKHSD 355
Query: 298 GQT----QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
GQ Q E+ +G++Q +KDKI LRIL+ + PGA GK PL ++DE IDYL+SL
Sbjct: 356 GQMYFARQTEDNSAAVGDIQLKKDKIRETLRILEKLTPGAKGKHPLLVIDETIDYLKSLM 415
Query: 354 LKAVALGV 361
+ LGV
Sbjct: 416 SQTGMLGV 423
>gi|224067023|ref|XP_002302331.1| predicted protein [Populus trichocarpa]
gi|222844057|gb|EEE81604.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 192/377 (50%), Gaps = 35/377 (9%)
Query: 6 ESWIYRQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLK 65
E W +Q WQ PD N + S Q P L+ P M S N LP Y FA L
Sbjct: 3 EDWGPQQQFNWQSPDTNYLGASFSSGQQNNPPLLMDPNVNMISTNG-LPEYP---FAELL 58
Query: 66 TEQIN----------GAHKALQILPPRFQNLVASPYPYLNEI-QPAFPCGFSE--QAAPN 112
Q+ G + Q P F +++ P L+ + + P E P
Sbjct: 59 RSQVGQENEPRGWFYGLPRFRQAFMPPFHSVLKEKRPLLDTVLKEKLPTAPREIKDIVPQ 118
Query: 113 EKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATL------KKEVSVNGFLQDKAIK 166
G QK LVFDQSG+QT L++SS + TPA K ++ + + K
Sbjct: 119 SDSGRAQKRFLVFDQSGDQTTLIFSSG----IGTPAQCLKSWIPKPTIAFDLNKEVTGAK 174
Query: 167 RDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKST 226
+Q + P+ +EF E+ + ++HED EE+NALLYSD D DY+ ED+EV ST
Sbjct: 175 ENQSFHLGPISTDEFVEDDGIEMQTDVHEDIEELNALLYSDDDSDYT-----EDEEVTST 229
Query: 227 DHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGY-NKSSQTDTACSVQLEGSH 285
HSP + ++K D +E+VASSDG NK++KL +GGY + S DTA SV+
Sbjct: 230 GHSPNTMT-THDKRDWFDGSTEDVASSDGSNKKRKLFDGGYIDGPSLMDTARSVKPTRDF 288
Query: 286 ECDNDAESGYANGQT-QKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDE 344
E ++DAES NG EE+ N + RK++I + ILQ +IPG GKD + +L+E
Sbjct: 289 EYEDDAESRCDNGTNLMSEEMGSESVNKRMRKERIRETVSILQNLIPGGKGKDAVIVLEE 348
Query: 345 AIDYLQSLKLKAVALGV 361
AI YL+SLK +A ALG+
Sbjct: 349 AIQYLKSLKFEAKALGL 365
>gi|356552949|ref|XP_003544822.1| PREDICTED: transcription factor bHLH145-like [Glycine max]
Length = 378
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 193/376 (51%), Gaps = 29/376 (7%)
Query: 7 SWIYRQHSAWQLPDLNCMRTS--LDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANL 64
+WI H WQ P+L+ + R+ + + + ++NAA+P Y S +
Sbjct: 7 TWIPELHFDWQSPNLSSFDAAAPFGARKQSGTSAAMNLGANVVTSNAAMPVYASSALPDS 66
Query: 65 KTEQINGAHKALQILPPRFQNLVASPYPYLNEIQPAFPCG----FSEQAAPNEKLGSLQK 120
++ H LP RF+ P N + P G E+ APN +LG QK
Sbjct: 67 QSGHSGEPHGWFYCLP-RFRQGFTMPARNFN-AKEKLPAGHAKDLGEEIAPNGELGFPQK 124
Query: 121 GLLVFDQSGNQTQLVYSSVCPSVLNT-PATLKKEVSVNGFLQDKAIKRD--QFTSVKPLL 177
LV DQ+G+QT LV+SS L + + L ++N + ++RD + P L
Sbjct: 125 QFLVIDQTGDQTTLVHSSRFGGPLASWNSKLHGFNNLNNGNELLNLRRDVNHVVGLGPTL 184
Query: 178 HEEFDENHISGK--ECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEG 235
+++ DEN + E EMHEDTEEINALLYS+ D YS +D +DDEV ST HSP +
Sbjct: 185 NDKVDENQRTDDDIESEMHEDTEEINALLYSE-SDGYST-EDDDDDEVTSTGHSPSTMT- 241
Query: 236 KYEKHDLTLE-----ISEEVASSDGPNKRQKLLNGGYNKSSQ--TDTACSVQLEGSHECD 288
HD E ++EVASS G K++KL +G Y+ DTA S+ + E
Sbjct: 242 ---THDDNQEEPDRGTAKEVASSVGETKKRKLWDGAYDDGDMQFMDTANSLNGKRLSEVG 298
Query: 289 NDAES---GYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEA 345
+DAES NG E+ + GN + RK+KI L ILQ I+PG KDP+ L+DEA
Sbjct: 299 DDAESKCSSGGNGSRGLGEMGSLSGNKKMRKEKIQDVLSILQCIVPGGKDKDPIELIDEA 358
Query: 346 IDYLQSLKLKAVALGV 361
I L+SLKLKA+ LG+
Sbjct: 359 IRCLKSLKLKAIELGL 374
>gi|224081987|ref|XP_002306548.1| predicted protein [Populus trichocarpa]
gi|222855997|gb|EEE93544.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 186/366 (50%), Gaps = 29/366 (7%)
Query: 11 RQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGY----VSPGFANLKT 66
+Q WQ P+ N + SL Q LP L+ P M N GY + P A+ +
Sbjct: 11 QQRFNWQSPNSNYLDASLAFGQQNTLPLLMDPNTNMVFTNGI--GYPFTELLPSQASQEN 68
Query: 67 E---QINGAHKALQILPPRFQNLVASPYPYLNEIQ----PAFPCGFSEQAAPNEKLGSLQ 119
E +G Q L P ++ P L+ + P P E P G Q
Sbjct: 69 EPRGWFHGLPHFRQALMPPSNSVHKERRPRLDTVLKEKLPTAPHDNKEDNMPKAVSGCDQ 128
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAI--KRDQFTSVKPLL 177
K LLVFDQSG+QT L++SS + + + + +V GF ++ I + Q + P+
Sbjct: 129 KRLLVFDQSGDQTTLIFSSGVGTPVQCLKSWIPKPTV-GFDLNREIPGAKGQNFHLGPIA 187
Query: 178 HEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKY 237
++EF E+ +MHEDTEE+NALLYSD +G +DEV ST HSP + +
Sbjct: 188 NDEFVED----DGIDMHEDTEELNALLYSD------DGSVCSEDEVTSTGHSPSTMT-TH 236
Query: 238 EKHDLTLEISEEVASSDGPNKRQKLLNGGYNKS-SQTDTACSVQLEGSHECDNDAESGYA 296
++ D +EEVASS+G NK++KL +GGY + S DTA SV+ + D ES
Sbjct: 237 DRRDWFDGSAEEVASSNGSNKKRKLFDGGYTDAPSLKDTATSVKPTRCFGHEEDVESRCD 296
Query: 297 NGQTQ-KEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
NG E+ GN + RK+ I + ILQ +IPG GKD + +L+EAI YL+SLK K
Sbjct: 297 NGTNSLSHEMGSESGNKRMRKENIRETMSILQNLIPGGKGKDAIVVLEEAIQYLKSLKFK 356
Query: 356 AVALGV 361
A ALG+
Sbjct: 357 AKALGL 362
>gi|255545906|ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor, putative [Ricinus communis]
Length = 424
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 187/360 (51%), Gaps = 19/360 (5%)
Query: 11 RQHSAWQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLKTEQIN 70
RQ WQ +LN + + +PS++ P + M S LP Y S Q N
Sbjct: 72 RQQFDWQSSNLNYLGAPFNVEHHRTIPSVMNPGSDMVSIKGTLPAYPSFDPPYSFVAQAN 131
Query: 71 GAHKALQILPPRFQNLVASPYPYLN----EIQPAFPCGFSEQA-APNEKLGSLQKGLLVF 125
H LP RF++ A P LN E PA G +++ P + G QK LVF
Sbjct: 132 EPHGWFYCLP-RFRHAFA---PSLNSGFKERLPAAANGNNKEVFTPKVESGCSQKRFLVF 187
Query: 126 DQSGNQTQLVYSSV--CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDE 183
DQSG+QT L++SS P T K + N +D K + ++ + ++ E
Sbjct: 188 DQSGDQTTLIFSSGIGTPVPGFTSWGRKPTGACNLKREDPGTKENLNIHLRAIAPDQLGE 247
Query: 184 NHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLT 243
N + + EMHEDT+E+NALLYSD + D +EDDEV ST HSP + + D
Sbjct: 248 NDGADLQSEMHEDTDELNALLYSD-----DDSDYTEDDEVTSTGHSPSTMTA-HNNQDWF 301
Query: 244 LEISEEVASSDGPNKRQKLLNGGYNK-SSQTDTACSVQLEGSHECDNDAESGYANG-QTQ 301
+EEVASS G K++KL +GG++ + DTA SV+ S E +NDAES +G
Sbjct: 302 KGSTEEVASSGGSTKKRKLFDGGFSDVPALMDTANSVKPVISFEYENDAESRCDDGLYWA 361
Query: 302 KEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
E+ N + RK+KI + ILQ IIPG GKD + +LDEAI YL+SLK+KA ALG+
Sbjct: 362 SSEMGSESSNKKMRKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALGL 421
>gi|357489915|ref|XP_003615245.1| Transcription factor bHLH143 [Medicago truncatula]
gi|355516580|gb|AES98203.1| Transcription factor bHLH143 [Medicago truncatula]
Length = 431
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 174/342 (50%), Gaps = 36/342 (10%)
Query: 46 MFSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQNLVASPYPYLNE--IQPAFPC 103
M N A P Y S +++ N H LP RF+ SP + +E + PA
Sbjct: 97 MIPRNEAAPAYGSSASPHVQLGNSNEPHGWFYCLP-RFRQGFTSPPNFTSEEKLPPASHL 155
Query: 104 -GFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVS----VNG 158
GF E APN + G QK LV DQ+G+QT ++YSS S + + +++ +NG
Sbjct: 156 KGFKEDIAPNGESGFPQKQFLVVDQTGDQTTVIYSSRFGSPVECLGSWDSKLNGCSNLNG 215
Query: 159 FLQDKAIKRD--QFTSVKPLLHEEFDENHISGKECE--MHEDTEEINALLYSDGDDDYSN 214
+ +++RD V P + DEN G E E MHEDTEEINALLYSD D
Sbjct: 216 N-DEPSLRRDVNHVIEVGPTFDYKVDENDNQGTEIESEMHEDTEEINALLYSDSD----- 269
Query: 215 GDDSEDDEVKSTDHSPVAIEGKYEKHDLTLE-ISEEVASSD-GPNKRQKLLNGGYNKSSQ 272
G +EDDEV ST HSP + + + +EEVASS G K++KL N Y+
Sbjct: 270 GYSTEDDEVTSTGHSPSTMTTHVNQQPFRIGGTAEEVASSSPGKTKKRKLFNMAYSDVDV 329
Query: 273 --TDTACSVQ------LEGSHECDNDAES-----GYANGQTQKEEIDFILGNMQSRKDKI 319
DTA S++ L + D+DAES Y G EI + G+ + RK+KI
Sbjct: 330 QFMDTASSLKRNRPFDLNRGVDDDDDAESRCSGSNYGRGSP---EIGSLTGHKKMRKEKI 386
Query: 320 HTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
L ILQ I+P K+P+ LLDEAI L SLKLKA ALG+
Sbjct: 387 QNVLSILQCIVPNGKDKEPIQLLDEAIHCLNSLKLKARALGL 428
>gi|356498829|ref|XP_003518251.1| PREDICTED: transcription factor bHLH145-like [Glycine max]
Length = 429
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 197/384 (51%), Gaps = 29/384 (7%)
Query: 1 MVKAHESWIYRQHSAWQLPDLNCMR-TSLDPRQPECLPSLIAPENYMFSANAALPGYVSP 59
++K +WI H WQ P+L+ T + + + + + NAA+P Y S
Sbjct: 48 LLKPVTTWIPELHFNWQSPNLSSFNATPFGVGKQNGTSAAMNSGANVVTRNAAMPAYASS 107
Query: 60 GFANLKTEQINGAHKALQILPPRFQNLVASPYPYLN--EIQPA-FPCGFSEQAAPNEKLG 116
+ + H LP RF+ +P N E PA G + APN + G
Sbjct: 108 ALPHSQLGHSGEPHGWFYCLP-RFRQGFTTPAQTFNAEEKLPAGHANGLGVEVAPNRESG 166
Query: 117 SLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPAT----LKKEVSVNGFLQDKAIKRD--QF 170
QK LLV DQ+G+QT LVYSS ++ + L +++N + ++RD
Sbjct: 167 FPQKQLLVIDQTGDQTTLVYSSRFGGPVDCHVSWDSKLHGSINLNNGNELLNLRRDVNHV 226
Query: 171 TSVKPLLHEEFDENHISGK--ECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDH 228
+ P L ++ EN + E EMHEDTEEINALLYSD D YS +D +DDEV ST H
Sbjct: 227 VGLGPTLDDKVHENTGTDDDIESEMHEDTEEINALLYSDSDG-YST-EDDDDDEVTSTGH 284
Query: 229 SPVAI----EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQ--TDTACSVQLE 282
SP + + + E H T +EEVASS G K++KLL+G Y+ + DTA S+ +
Sbjct: 285 SPSTMTTHDDNQEEPHRRT---AEEVASSVGETKKRKLLDGAYDDDNLQFMDTASSLNGK 341
Query: 283 GS-HECDNDAESGYANGQTQKEEIDFILG----NMQSRKDKIHTALRILQGIIPGANGKD 337
E ++DAES ++G +G N + RK+KI L ILQ I+PG KD
Sbjct: 342 KRPFEVEDDAESRCSSGGNSSSRGSGGMGSLSGNKKMRKEKIQDVLSILQCIVPGGKDKD 401
Query: 338 PLSLLDEAIDYLQSLKLKAVALGV 361
P+ LLDEAI L+SLKLKA+ LG+
Sbjct: 402 PIELLDEAIRCLKSLKLKAIELGL 425
>gi|356518416|ref|XP_003527875.1| PREDICTED: transcription factor SAC51-like [Glycine max]
Length = 370
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 168/327 (51%), Gaps = 26/327 (7%)
Query: 49 ANAALPGYVSPGFANLK---TEQINGAHKALQILPPRFQ---NLVASPYPYLNEIQPAFP 102
NA +P + S +L+ + + +G L P F N A P + ++
Sbjct: 53 TNATVPAFGSSTVPHLQLGHSYEPSGWSYCLPCFPQGFAPALNFNAEGNPPADHVKT--- 109
Query: 103 CGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQ- 161
F ++ P + SLQK +LV DQ+G QT +VYSS S A+ ++ +L+
Sbjct: 110 --FGDKIGPYGESSSLQKQILVIDQTGGQTTIVYSSRFGSPGECLASWHSKLHGANYLRG 167
Query: 162 -DKAIKRDQFTS-----VKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNG 215
+ + +R + +P L ++ D N + E EMHEDTEEINALLYSD YS
Sbjct: 168 NEPSFRRGLNLNLNLNMTEPTLADKVDGNPGTSIESEMHEDTEEINALLYSD-SYGYSTQ 226
Query: 216 DDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDT 275
DD DDEV ST HSP + + +EEVASS K++KLL+G Y+ DT
Sbjct: 227 DD--DDEVTSTGHSPSTMTTHDNCETFRRDTAEEVASSARKTKKRKLLDGYYDDIQLIDT 284
Query: 276 ACSVQL-EGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGAN 334
A S L + S D+DAES ++ + + GN + +K+KI L ILQ IIPG
Sbjct: 285 ASSQNLNKSSATGDDDAESRCSSNNNEGS----LSGNKKIKKEKIRDVLSILQSIIPGGK 340
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALGV 361
KDP+ LLD AI L+SLK KA ALG+
Sbjct: 341 DKDPVMLLDNAIHCLKSLKHKAQALGL 367
>gi|356510098|ref|XP_003523777.1| PREDICTED: transcription factor bHLH143-like [Glycine max]
Length = 379
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 141/264 (53%), Gaps = 14/264 (5%)
Query: 105 FSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQ--D 162
F ++ P + S QK LV DQ+G QT +VYSS+ + A+ ++ +L+ +
Sbjct: 116 FGDKIGPYGESSSHQKQFLVIDQTGGQTTIVYSSMFGNPDECLASWHSKLHGANYLRGNE 175
Query: 163 KAIKRD-------QFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNG 215
+ +RD + +P L + DEN + E EMHEDTEEINALLYSD YS
Sbjct: 176 PSFRRDLNLNLNLKVNMTEPTLAHKVDENLKTSIESEMHEDTEEINALLYSDSYG-YSTQ 234
Query: 216 DDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDT 275
D+ +DDEV ST HSP + E +EEVAS G K++K L+G Y+ DT
Sbjct: 235 DEDDDDEVTSTGHSPSTMTTHDNCEAFRGETAEEVASIAGKTKKRKQLDGYYDDIQLIDT 294
Query: 276 ACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANG 335
S L S +DAES ++ + + GN + +KDKI L IL+ IIPG
Sbjct: 295 GSSQNLNKSSATGDDAESRCSSNNNEGS----LSGNKKMKKDKIRDVLSILRSIIPGGKD 350
Query: 336 KDPLSLLDEAIDYLQSLKLKAVAL 359
KDP LLD+AI L++LK KA AL
Sbjct: 351 KDPAMLLDDAIHCLKNLKHKAQAL 374
>gi|449470078|ref|XP_004152745.1| PREDICTED: transcription factor bHLH145-like [Cucumis sativus]
gi|449521814|ref|XP_004167924.1| PREDICTED: transcription factor bHLH145-like [Cucumis sativus]
Length = 482
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 180/352 (51%), Gaps = 16/352 (4%)
Query: 16 WQLPDLNCMRTSLDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLKTEQINGAHKA 75
W+ LN + + +P + S I+ N M N P + + +N
Sbjct: 137 WEPSLLNSFSAAPNLGRPNLVASSIS--NNMVMKNGTFPVSSALKVPQPQVGLVNEPRSW 194
Query: 76 LQILPPRFQNLVASPYPYLNEIQPAFPCGF-SEQAAPNEKLGSLQKGLLVFDQSGNQTQL 134
L L P Q + P N+ A G E AP G+ QKG LV DQS ++T L
Sbjct: 195 LHCLGPSQQATLPVKSPIYNDNLVAQSKGLLKEDVAPLCGSGTQQKGFLVIDQSADKTTL 254
Query: 135 VYSSVCPSVLNTPATLKKEVSV----NGFLQDKAIKRDQFTSVKPLLHEEFDENHISGKE 190
V S L + + S NG +D K+D KP+L +F ENH + ++
Sbjct: 255 VLCSGVGGPLQLLTSWSPQPSAAYKFNG--EDTRNKQDFIYDSKPVLSNDFAENHETDEQ 312
Query: 191 CEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEV 250
EM EDTEE+NALLYS+ + D ++DEV ST HSP A+ K +++ E++EEV
Sbjct: 313 SEMQEDTEELNALLYSE----DESEFDEDEDEVTSTGHSPSAMTTKDKRYPCE-EMNEEV 367
Query: 251 ASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYAN-GQTQKEEIDFIL 309
ASS G K++K+ +GG++ S DTA S S E ++DAES N G E++D
Sbjct: 368 ASSAGSTKKRKI-DGGFDVMSVMDTASSPMPRRSPEYEDDAESNCGNVGSQDIEDVDSSS 426
Query: 310 GNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
N + RK+KI + IL+ +IPG GK+ + +LDEAI YL+SL+LKA G+
Sbjct: 427 INKKIRKEKIRETVGILESLIPGGKGKEAIVVLDEAIQYLKSLRLKAETFGL 478
>gi|297797451|ref|XP_002866610.1| hypothetical protein ARALYDRAFT_496639 [Arabidopsis lyrata subsp.
lyrata]
gi|297312445|gb|EFH42869.1| hypothetical protein ARALYDRAFT_496639 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 144/256 (56%), Gaps = 27/256 (10%)
Query: 111 PNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQ--DKAIKRD 168
P+E L S QK LL+FDQSGNQT+L+ CP L P+ + LQ +KA K D
Sbjct: 91 PHEALESSQKRLLIFDQSGNQTRLLQ---CPFPLRFPSHAAADPVKLSDLQGIEKAFKED 147
Query: 169 QFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDH 228
EEFD+NH+ G E EMHEDTEEINALLYSD D D + D DDEV ST H
Sbjct: 148 G---------EEFDKNHLDGTESEMHEDTEEINALLYSDDDYDDDD-DCESDDEVMSTGH 197
Query: 229 SPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLL---NGGYNKSSQTDTACSVQLEGSH 285
SP + E K +L EE+ DGP KRQKLL N + SS T S +L GS
Sbjct: 198 SPYSNERVCNKREL-----EEI---DGPCKRQKLLDKVNSSSDSSSLVGTTSSTKLNGSS 249
Query: 286 ECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEA 345
D + + + KE+ L N QS+KD I TAL+IL+ I+PGA G D L LLDEA
Sbjct: 250 FL-KDKKLPESKNISTKEDTGSGLSNDQSKKDNIRTALKILESIVPGAKGNDALLLLDEA 308
Query: 346 IDYLQSLKLKAVALGV 361
IDYL LK ++ V
Sbjct: 309 IDYLTLLKRDLISTEV 324
>gi|312282467|dbj|BAJ34099.1| unnamed protein product [Thellungiella halophila]
Length = 329
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 138/256 (53%), Gaps = 31/256 (12%)
Query: 109 AAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRD 168
P L S QK L++FDQSGNQT+L+ CP L P+ E
Sbjct: 84 TTPQRALESSQKRLMIFDQSGNQTRLLR---CPFPLRFPSPAVAEPM------------- 127
Query: 169 QFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDH 228
+F + E+ +EN +SGKE EMHEDTEEINALLYSD DDD DDEV ST H
Sbjct: 128 KFYGLAKAFKEDCEENDLSGKESEMHEDTEEINALLYSDDDDDDDG--CESDDEVMSTGH 185
Query: 229 SPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYN---KSSQTDTACSVQLEGSH 285
SP IE K ++ EE+ DGP KRQKLL+ N SS T S L GS
Sbjct: 186 SPYPIEQVCNKREM-----EEI---DGPCKRQKLLDKVKNISDSSSLVGTRSSTTLNGSS 237
Query: 286 ECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEA 345
D + + T KE+ L N QS+KDKI TAL+IL+ ++PGA G + L LLDEA
Sbjct: 238 FL-MDKKLPESKCST-KEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLLLDEA 295
Query: 346 IDYLQSLKLKAVALGV 361
IDYL+ LK ++ +
Sbjct: 296 IDYLKLLKRDLISRTI 311
>gi|15242422|ref|NP_196508.1| transcription factor bHLH143 [Arabidopsis thaliana]
gi|75173194|sp|Q9FY69.1|BH143_ARATH RecName: Full=Transcription factor bHLH143; AltName: Full=Basic
helix-loop-helix protein 143; Short=AtbHLH143;
Short=bHLH 143; AltName: Full=Transcription factor EN
129; AltName: Full=bHLH transcription factor bHLH143
gi|9955533|emb|CAC05472.1| putative protein [Arabidopsis thaliana]
gi|22135920|gb|AAM91542.1| putative protein [Arabidopsis thaliana]
gi|23197602|gb|AAN15328.1| putative protein [Arabidopsis thaliana]
gi|332004013|gb|AED91396.1| transcription factor bHLH143 [Arabidopsis thaliana]
Length = 326
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 25/331 (7%)
Query: 28 LDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQNLV 87
LD +Q + LP + P+ + Y PG + ++ A + L P FQ L+
Sbjct: 3 LDTKQQKWLPLGLNPQACVQDKATE---YFRPGIPFPELGKVYAAEHQFRYLQPPFQALL 59
Query: 88 ASPYPYLNEIQPAFPCGFSEQ-AAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNT 146
+ Q + G S AAP L S +K +VFDQSG QT+L+ C L
Sbjct: 60 SRYDQQSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQSGEQTRLLQ---CGFPLRF 116
Query: 147 PATLKKEV-SVNGFLQ-DKAIKRDQFTSVKPLLHEEFDENHISGKE-CEMHEDTEEINAL 203
P+++ E ++ G L +K +D K L HE +H +G+E EMHEDTEEINAL
Sbjct: 117 PSSMDAERGNILGALHPEKGFSKDHAIQEKILQHE----DHENGEEDSEMHEDTEEINAL 172
Query: 204 LYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPN-KRQKL 262
LYSD DD+ DDEV ST HSP +E + + T E+ E ++ DGP KRQKL
Sbjct: 173 LYSDDDDNDDW---ESDDEVMSTGHSPFTVE-QQACNITTEELDETESTVDGPLLKRQKL 228
Query: 263 LNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTA 322
L+ Y SS + + +++G + +N ES ++ K+E L + QSRKDKIHTA
Sbjct: 229 LDHSYRDSSPS-LVGTTKVKGLSD-ENLPESNISS----KQETGSGLSDEQSRKDKIHTA 282
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
LRIL+ ++PGA GK+ L LLDEAIDYL+ LK
Sbjct: 283 LRILESVVPGAKGKEALLLLDEAIDYLKLLK 313
>gi|297811035|ref|XP_002873401.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
gi|297319238|gb|EFH49660.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
Length = 325
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 178/340 (52%), Gaps = 44/340 (12%)
Query: 28 LDPRQPECLPSLIAPENYM--FSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQN 85
LD RQ + LP + P+ + + ++ PG P ++ A + L P F
Sbjct: 3 LDTRQQKWLPLGLNPQACVQDTATESSRPGIPFPELG-----KVYAAEHQFRYLQPPFPA 57
Query: 86 LVA--------SPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYS 137
L++ P LN CG AAP L S +K LVFDQSG+QT+++
Sbjct: 58 LLSRYDKQSCGKQVPCLNGRSS---CG----AAPEGGLKSSRKRFLVFDQSGDQTRVLQ- 109
Query: 138 SVCPSVLNTPATLKKEV-SVNGFLQ-DKAIKRDQFTSVKPLLHEEFDENHISG-KECEMH 194
C L P+++ E ++ G L +K +D K L HE +H++G +E +MH
Sbjct: 110 --CGFPLRFPSSMDAERGNILGSLHPEKGFSKDHAIQEKILQHE----DHVNGDEESDMH 163
Query: 195 EDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSD 254
EDTEEINALLYSD DD+ DDEV ST HSP +E + + T E+ E +S D
Sbjct: 164 EDTEEINALLYSDDDDNDDW---ESDDEVMSTGHSPFPVE-QQACNKTTEELDETESSVD 219
Query: 255 GPN-KRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQ 313
GP+ KRQKLL+ Y SS + V+ +N ES ++ K+E L + Q
Sbjct: 220 GPHLKRQKLLDHSYRDSSLSLVGTKVK---GLSDENLPESNISS----KQETGSGLSDEQ 272
Query: 314 SRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
S KDKI TALRIL+ ++PGA GK+ L LLDEAIDYLQ LK
Sbjct: 273 SSKDKILTALRILESVVPGAKGKEALLLLDEAIDYLQLLK 312
>gi|312283073|dbj|BAJ34402.1| unnamed protein product [Thellungiella halophila]
Length = 319
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 144/262 (54%), Gaps = 34/262 (12%)
Query: 106 SEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVC----PSVLNTPA----TLKKEVSVN 157
S AAP+ L S QK L+FD SGNQT+L+ S SV P +LK E N
Sbjct: 66 SYDAAPDGALKSSQKRFLIFDHSGNQTRLLQSGFPLQFPSSVAAEPGKILDSLKPE---N 122
Query: 158 GFLQDKAIKRDQFTSVKPLLHEEFDENHISGKECEMHE----DTEEINALLYSDGDDDYS 213
GF +D AI LLH + E GKE E DTEEI+ALLYSD +D
Sbjct: 123 GFSKDHAIPE------TILLHGDHVEKCYDGKEEEEESEMHEDTEEIDALLYSDDED--- 173
Query: 214 NGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLE-ISEEVASSDGPN-KRQKLLNGGYNKSS 271
N D DDEV ST HSP +E + D T E + E +S DGP KRQKL++ + + S
Sbjct: 174 NDDCESDDEVMSTGHSPFLVE--QQACDKTKEEVDETESSDDGPRRKRQKLVDHSH-RDS 230
Query: 272 QTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIP 331
T +L+G +D + G +N + K E L + QSRKDKIH ALRIL+ ++P
Sbjct: 231 FVGTNSFTKLKGL----SDEKLGESNSSS-KLETGSGLSDEQSRKDKIHIALRILESVVP 285
Query: 332 GANGKDPLSLLDEAIDYLQSLK 353
GA GK+ L LLDEAIDYL+ LK
Sbjct: 286 GAKGKEALLLLDEAIDYLKLLK 307
>gi|15237677|ref|NP_201239.1| transcription factor SAC51 [Arabidopsis thaliana]
gi|75171654|sp|Q9FMF4.1|SAC51_ARATH RecName: Full=Transcription factor SAC51; AltName: Full=Basic
helix-loop-helix protein 142; Short=AtbHLH142;
Short=bHLH 142; AltName: Full=Protein SUPPRESSOR OF
ACAULIS 51; AltName: Full=Transcription factor EN 128;
AltName: Full=bHLH transcription factor bHLH142
gi|9759410|dbj|BAB09865.1| unnamed protein product [Arabidopsis thaliana]
gi|17064970|gb|AAL32639.1| Unknown protein [Arabidopsis thaliana]
gi|20259970|gb|AAM13332.1| unknown protein [Arabidopsis thaliana]
gi|332010489|gb|AED97872.1| transcription factor SAC51 [Arabidopsis thaliana]
Length = 348
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 171/346 (49%), Gaps = 42/346 (12%)
Query: 28 LDPRQPECLPSLIAPENYM--FSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQN 85
LD RQ + LP ++P+ + LP P L ++ + LQ PP FQ+
Sbjct: 3 LDKRQRD-LPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQA--RCLQ--PPPFQS 57
Query: 86 LVAS------PYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSV 139
L+ S + ++ + P L S QK LL+FDQSG+QT+L+
Sbjct: 58 LLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRLLIFDQSGDQTRLLQ--- 114
Query: 140 CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHIS-GKECEMHEDTE 198
CP L P+ E +K + ++ E+ +E H S G E EMHEDTE
Sbjct: 115 CPFPLRFPSHAAAE----------PVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTE 164
Query: 199 EINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNK 258
EINALLYSD D D DDEV ST HSP EG K +L EE+ DGP K
Sbjct: 165 EINALLYSDDDYDDDC---ESDDEVMSTGHSPYPNEGVCNKREL-----EEI---DGPCK 213
Query: 259 RQKLL---NGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSR 315
RQKLL N + SS T S QL GS D + + + KE+ L N QS+
Sbjct: 214 RQKLLDKVNNISDLSSLVGTESSTQLNGSSFL-KDKKLPESKTISTKEDTGSGLSNEQSK 272
Query: 316 KDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
KDKI TAL+IL+ ++PGA G + L LLDEAIDYL+ LK ++ V
Sbjct: 273 KDKIRTALKILESVVPGAKGNEALLLLDEAIDYLKLLKRDLISTEV 318
>gi|297792281|ref|XP_002864025.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
gi|297309860|gb|EFH40284.1| transcription factor/ transcription regulator [Arabidopsis lyrata
subsp. lyrata]
Length = 303
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 121/246 (49%), Gaps = 43/246 (17%)
Query: 119 QKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLH 178
QK LVFDQSG+ T L+ +S + + TLK+ V + + + +D F V +H
Sbjct: 97 QKRFLVFDQSGDPTTLLVTS---DIRKSFETLKQPVCPDMKEEIQRSNKDLF--VCQGMH 151
Query: 179 EEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
E ++ EDTEE+NALLYS+G+ DY SE+DEV S+DHSP +
Sbjct: 152 --------GNSEPDLKEDTEELNALLYSEGESDYC----SEEDEVTSSDHSPSIV----- 194
Query: 239 KHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANG 298
V++ +G QK G Y +S + LE S+E DAES +
Sbjct: 195 -----------VSAHEG----QKAFLGSYGQS--LNAKKRKTLETSNENMRDAESSCGSC 237
Query: 299 QTQKEEIDFILGNMQSRK----DKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKL 354
I F+ + S K +KI + +L+ I+PG DP+ ++D AIDYL+SLK+
Sbjct: 238 DNDNTGISFLKRSKTSSKKIGEEKIFETVSLLRSIVPGEELVDPILVIDRAIDYLKSLKM 297
Query: 355 KAVALG 360
+ G
Sbjct: 298 EVKNRG 303
>gi|15240599|ref|NP_199812.1| transcription factor bHLH145 [Arabidopsis thaliana]
gi|75170387|sp|Q9FGB0.1|BH145_ARATH RecName: Full=Transcription factor bHLH145; AltName: Full=Basic
helix-loop-helix protein 145; Short=AtbHLH145;
Short=bHLH 145; AltName: Full=Transcription factor EN
131; AltName: Full=bHLH transcription factor bHLH145
gi|10177212|dbj|BAB10287.1| unnamed protein product [Arabidopsis thaliana]
gi|26449412|dbj|BAC41833.1| unknown protein [Arabidopsis thaliana]
gi|28950883|gb|AAO63365.1| At5g50010 [Arabidopsis thaliana]
gi|332008500|gb|AED95883.1| transcription factor bHLH145 [Arabidopsis thaliana]
Length = 311
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 142/319 (44%), Gaps = 63/319 (19%)
Query: 46 MFSANAA--LPGYVSPGFANLKTEQINGA-HKALQILPPRFQNLVASPYPYLNEIQPAFP 102
MFS + + VS + + ++G+ H Q LPP+ Q + P I A
Sbjct: 43 MFSTRGSYQVSTQVSQSYFDGYCGWVHGSSHLQQQFLPPQNQCMKQVPLQVDGVISKA-- 100
Query: 103 CGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQD 162
EQ + QK LVFDQSG+QT L+ +S + + TLK+ + +
Sbjct: 101 ---EEQCS--------QKRFLVFDQSGDQTTLLLAS---DIRKSFETLKQHACPDMKEEL 146
Query: 163 KAIKRDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDE 222
+ +D F E ++ ED+EE+NALLYS+ + Y SE+DE
Sbjct: 147 QRSNKDLFVC----------HGMQGNSEPDLKEDSEELNALLYSEDESGYC----SEEDE 192
Query: 223 VKSTDHSP-VAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQL 281
V S DHSP + + G+ + QK G Y + + L
Sbjct: 193 VTSADHSPSIVVSGRED---------------------QKTFLGSYGQP--LNAKKRKIL 229
Query: 282 EGSHECDNDAESGYANGQTQKEEIDFI----LGNMQSRKDKIHTALRILQGIIPGANGKD 337
E S+E DAES + G I F+ L + + ++KI + +L+ ++PG D
Sbjct: 230 ETSNESMRDAES--SCGSCDNTRISFLKRSKLSSNKIGEEKIFETVSLLRSVVPGEELVD 287
Query: 338 PLSLLDEAIDYLQSLKLKA 356
P+ ++D AIDYL+SLK++A
Sbjct: 288 PILVIDRAIDYLKSLKMEA 306
>gi|218192968|gb|EEC75395.1| hypothetical protein OsI_11883 [Oryza sativa Indica Group]
Length = 414
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 47/266 (17%)
Query: 124 VFDQSGNQTQLVYSSVCPSV-LNTPATLKKEVSV------NGFLQDKAIKRDQFTSVKPL 176
V D+ + + +++ PSV L+T TL+K V N F + + +V L
Sbjct: 163 VTDRPVSFSSRFVTTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPEL 222
Query: 177 LHEEFDENHIS-----GKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPV 231
+ +E +++ EC MHE+TEEI+ALL SD D+ + ++ V+
Sbjct: 223 --QGSNETNVTDVGAQNTEC-MHENTEEIDALLCSDSDEGCLKVQEL-NNRVR------- 271
Query: 232 AIEGKYEKHDLTLEISEEVASSDG--PNKRQKLLNGGYNKSSQTDTACSV-------QLE 282
KY + T+ + E VAS+ P K+++L +G S DTA S Q
Sbjct: 272 ----KYPMQNDTMSV-ESVASAGASQPAKKRRLSSG--TDRSVVDTASSARPDHSVDQKH 324
Query: 283 GSHE------CDNDAESGYANGQTQKEEIDFILG--NMQSRKDKIHTALRILQGIIPGAN 334
SH+ C + ES + + EE + G + + R+++I + L+ I+PG
Sbjct: 325 LSHDDDAQSCCIGEVESDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGI 384
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALG 360
KD ++LDEAI YL+ LKLK LG
Sbjct: 385 AKDATAVLDEAICYLKYLKLKVKTLG 410
>gi|222625055|gb|EEE59187.1| hypothetical protein OsJ_11123 [Oryza sativa Japonica Group]
Length = 359
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 47/266 (17%)
Query: 124 VFDQSGNQTQLVYSSVCPSV-LNTPATLKKEVSV------NGFLQDKAIKRDQFTSVKPL 176
V D+ + + +++ PSV L+T TL+K V N F + + +V L
Sbjct: 108 VTDRPVSFSSRFVTTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPEL 167
Query: 177 LHEEFDENHIS-----GKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPV 231
+ +E +++ EC MHE+TEEI+ALL SD D+ + ++ V+
Sbjct: 168 --QGSNETNVTDVGAQNTEC-MHENTEEIDALLCSDSDEGCLKVQEL-NNRVR------- 216
Query: 232 AIEGKYEKHDLTLEISEEVASSDG--PNKRQKLLNGGYNKSSQTDTACSV-------QLE 282
KY + T+ + E VAS+ P K+++L +G S DTA S Q
Sbjct: 217 ----KYPMQNDTMSV-ESVASAGASQPAKKRRLSSG--TDRSVVDTASSARPDHSVDQKH 269
Query: 283 GSHE------CDNDAESGYANGQTQKEEIDFILG--NMQSRKDKIHTALRILQGIIPGAN 334
SH+ C + ES + + EE + G + + R+++I + L+ I+PG
Sbjct: 270 LSHDDDAQSCCIGEVESDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGI 329
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALG 360
KD ++LDEAI YL+ LKLK LG
Sbjct: 330 AKDATAVLDEAICYLKYLKLKVKTLG 355
>gi|115453363|ref|NP_001050282.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|40539023|gb|AAR87280.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|108708576|gb|ABF96371.1| expressed protein [Oryza sativa Japonica Group]
gi|108708577|gb|ABF96372.1| expressed protein [Oryza sativa Japonica Group]
gi|113548753|dbj|BAF12196.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|215686766|dbj|BAG89616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 47/266 (17%)
Query: 124 VFDQSGNQTQLVYSSVCPSV-LNTPATLKKEVSV------NGFLQDKAIKRDQFTSVKPL 176
V D+ + + +++ PSV L+T TL+K V N F + + +V L
Sbjct: 64 VTDRPVSFSSRFVTTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPEL 123
Query: 177 LHEEFDENHIS-----GKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPV 231
+ +E +++ EC MHE+TEEI+ALL SD D+ + ++ V+
Sbjct: 124 --QGSNETNVTDVGAQNTEC-MHENTEEIDALLCSDSDEGCLKVQEL-NNRVR------- 172
Query: 232 AIEGKYEKHDLTLEISEEVASSDG--PNKRQKLLNGGYNKSSQTDTACSV-------QLE 282
KY + T+ + E VAS+ P K+++L +G S DTA S Q
Sbjct: 173 ----KYPMQNDTMSV-ESVASAGASQPAKKRRLSSG--TDRSVVDTASSARPDHSVDQKH 225
Query: 283 GSHE------CDNDAESGYANGQTQKEEIDFILG--NMQSRKDKIHTALRILQGIIPGAN 334
SH+ C + ES + + EE + G + + R+++I + L+ I+PG
Sbjct: 226 LSHDDDAQSCCIGEVESDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGI 285
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALG 360
KD ++LDEAI YL+ LKLK LG
Sbjct: 286 AKDATAVLDEAICYLKYLKLKVKTLG 311
>gi|242035575|ref|XP_002465182.1| hypothetical protein SORBIDRAFT_01g033470 [Sorghum bicolor]
gi|241919036|gb|EER92180.1| hypothetical protein SORBIDRAFT_01g033470 [Sorghum bicolor]
Length = 314
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 32/200 (16%)
Query: 180 EFDENHISGKECE-MHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
E + + +E E +HE+++EINALL SD D+ Y ++++ D V + E
Sbjct: 124 ETNVTDVGAEETEGIHENSDEINALLDSDSDEGY--------EKLQELDR--VRRQSAAE 173
Query: 239 KHDLTLE--ISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHE-----CDNDA 291
L++E S A+ P +++ L+ +KS DTA S + + S E D DA
Sbjct: 174 NDTLSVESVGSAGAAAGSAPPAKKRRLSSCTDKSV-VDTASSARPDHSIEQKLLVNDCDA 232
Query: 292 ESGYANGQTQKEEIDFILGNMQS-----------RKDKIHTALRILQGIIPGANGKDPLS 340
+S G+ + + F LG +++ R+++I + L+ I+PG KD +
Sbjct: 233 QSCCV-GEVESDH-KFSLGEVEAAEGDSPDDQKRRRERIQETVAALRNIVPGGIAKDATA 290
Query: 341 LLDEAIDYLQSLKLKAVALG 360
+LDEAI YLQ LKLK LG
Sbjct: 291 VLDEAICYLQYLKLKVKTLG 310
>gi|227202838|dbj|BAH56892.1| AT5G50010 [Arabidopsis thaliana]
Length = 274
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 36/196 (18%)
Query: 46 MFSANAA--LPGYVSPGFANLKTEQINGA-HKALQILPPRFQNLVASPYPYLNEIQPAFP 102
MFS + + VS + + ++G+ H Q LPP+ Q + P I A
Sbjct: 43 MFSTRGSYQVSTQVSQSYFDGYCGWVHGSSHLQQQFLPPQNQCMKQVPLQVDGVISKA-- 100
Query: 103 CGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQD 162
EQ + QK LVFDQSG+QT L+ +S + + TLK+ +
Sbjct: 101 ---EEQCS--------QKRFLVFDQSGDQTTLLLAS---DIRKSFETLKQHACPD----- 141
Query: 163 KAIKRDQFTSVKPLLHEEFDENHISG-KECEMHEDTEEINALLYSDGDDDYSNGDDSEDD 221
+K + S K L F + + G E ++ ED+EE+NALLYS+ + Y SE+D
Sbjct: 142 --MKEELQRSNKDL----FVCHGMQGNSEPDLKEDSEELNALLYSEDESGYC----SEED 191
Query: 222 EVKSTDHSP-VAIEGK 236
EV S DHSP + + G+
Sbjct: 192 EVTSADHSPSIVVSGR 207
>gi|357111958|ref|XP_003557777.1| PREDICTED: transcription factor bHLH145-like [Brachypodium
distachyon]
Length = 320
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 50/198 (25%)
Query: 192 EMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVA 251
+ HE+TEEINALL SD D+ Y + + D+ +++E ++ +
Sbjct: 142 DTHENTEEINALLDSDSDEGYEKVHEFNKAKKSPVDNDTLSVE--------SVASAGASV 193
Query: 252 SSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEID----F 307
+ P K++KL S DTA S A G++NGQ D
Sbjct: 194 GAAHPTKKRKL--SSDTDRSVVDTASS------------ARPGHSNGQKHPGNDDDAQSC 239
Query: 308 ILGNMQS------------------------RKDKIHTALRILQGIIPGANGKDPLSLLD 343
+G ++S R +KI + L+ I+PG KD ++LD
Sbjct: 240 CIGEVESDRKFALTLKDGEEAEGDSPDDRKLRIEKIQETVAALRKIVPGGIAKDATTVLD 299
Query: 344 EAIDYLQSLKLKAVALGV 361
EAI YL SLKLK LG
Sbjct: 300 EAISYLTSLKLKVKTLGA 317
>gi|302802899|ref|XP_002983203.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
gi|300148888|gb|EFJ15545.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
Length = 277
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 40/198 (20%)
Query: 167 RDQFTSVKPL----LHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDE 222
+D +SV L L ++ DE S +E ED+E+I+ALLYSDGD + ++E
Sbjct: 101 KDSDSSVSKLSWDHLRDDDDEQQSSVRE----EDSEDIDALLYSDGD---EGLLEEVEEE 153
Query: 223 VKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLE 282
ST H+P++ + E D E+ SS N++ + + +V
Sbjct: 154 ECSTGHTPLSEVTRDESSD-------EITSS--------FHAENSNRAVEQEAIVAV--- 195
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNMQS-RKDKIHTALRILQGIIPGANGKDPLSL 341
+ Y+N + Q+ + M+ RK++I ++ LQ I+PG + DP +
Sbjct: 196 ----------ASYSNRKRQRSLVVRRRKEMKKQRKERIRQTVKALQSIVPGGDSMDPAIV 245
Query: 342 LDEAIDYLQSLKLKAVAL 359
LDEAI Y++ L+++ L
Sbjct: 246 LDEAILYMKVLQMRVRQL 263
>gi|302812000|ref|XP_002987688.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
gi|300144580|gb|EFJ11263.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
Length = 268
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 177 LHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGK 236
L ++ DE S +E ED+E+I+ALLYSDGD+ ++E ST H+P++ +
Sbjct: 106 LRDDDDEQQSSVRE----EDSEDIDALLYSDGDEGLLE---EVEEEECSTGHTPLSEVTR 158
Query: 237 YEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYA 296
E D E+ SS N++ + + +V + Y+
Sbjct: 159 DESSD-------EITSS--------FHAENSNRAVEQEAILAV-------------ASYS 190
Query: 297 NGQTQKEEIDFILGNMQS-RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
N + Q+ + M+ RK++I ++ LQ I+PG + DP +LDEAI Y++ L+++
Sbjct: 191 NRKRQRSLVVRRRKEMKKQRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMR 250
Query: 356 AVAL 359
L
Sbjct: 251 VRQL 254
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 76/248 (30%)
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATL------KKEVSVNGFLQDKAIKRDQFTSV 173
K ++FDQ+ +++++++ PS+ N GF QD A K +
Sbjct: 81 KNYVIFDQTYDRSRVMFH---PSLANNLGNSGGGYDHHHHCGYGGFEQDYASKSAYYG-- 135
Query: 174 KPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAI 233
+++ G EDT+EI+AL+ ++ D E+D+V ST +P
Sbjct: 136 -------VEDDGGGGCSIRQKEDTDEIDALMSTE--------DGEEEDDVLSTGRTP--- 177
Query: 234 EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAES 293
G D+ CS S +C
Sbjct: 178 --------------------------------GCRAGGSPDSTCSSGASRS-DC------ 198
Query: 294 GYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
G +K E G + +K+++ +R L+GIIPG + D ++LDEA+ YL+SLK
Sbjct: 199 ----GGGRKPEA----GGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLK 250
Query: 354 LKAVALGV 361
++ LGV
Sbjct: 251 VEVKKLGV 258
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 76/247 (30%)
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATL------KKEVSVNGFLQDKAIKRDQFTSV 173
K ++FDQ+ +++++++ PS+ N GF QD A K +
Sbjct: 81 KNYVIFDQTYDRSRVMFH---PSLANNLGNSGGGYDHHHHCGYGGFEQDYASKSAYYG-- 135
Query: 174 KPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAI 233
+++ G EDT+EI+AL+ ++ D E+D+V ST +P
Sbjct: 136 -------VEDDGGGGCSIRQKEDTDEIDALMSTE--------DGEEEDDVLSTGRTP--- 177
Query: 234 EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAES 293
G D+ CS G+ D
Sbjct: 178 --------------------------------GCRAGGSPDSTCS---SGASRSDC---- 198
Query: 294 GYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
G +K E G + +K+++ +R L+GIIPG + D ++LDEA+ YL+SLK
Sbjct: 199 ----GGGRKPEA----GGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLK 250
Query: 354 LKAVALG 360
++ LG
Sbjct: 251 VEVKKLG 257
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 76/248 (30%)
Query: 120 KGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKK------EVSVNGFLQDKAIKRDQFTSV 173
K ++FDQ+ +++++++ PS+ N GF QD A K +
Sbjct: 81 KNYVIFDQTYDRSRVMFH---PSLANNLGNSGGGYDHHHHCGYGGFEQDYASKSAYYG-- 135
Query: 174 KPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAI 233
+++ G EDT+EI+AL+ ++ D E+D+V ST +P
Sbjct: 136 -------VEDDGGGGCSIRQKEDTDEIDALMSTE--------DGEEEDDVLSTGRTP--- 177
Query: 234 EGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAES 293
G D+ CS S +C
Sbjct: 178 --------------------------------GCRAGGSPDSTCSSGASRS-DC------ 198
Query: 294 GYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
G +K E G + +K+++ +R L+GIIPG + D ++LDEA+ YL+SLK
Sbjct: 199 ----GGGRKPEA----GGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLK 250
Query: 354 LKAVALGV 361
++ LG
Sbjct: 251 VEVKKLGA 258
>gi|115445769|ref|NP_001046664.1| Os02g0315600 [Oryza sativa Japonica Group]
gi|46389916|dbj|BAD15700.1| unknown protein [Oryza sativa Japonica Group]
gi|113536195|dbj|BAF08578.1| Os02g0315600 [Oryza sativa Japonica Group]
gi|125539170|gb|EAY85565.1| hypothetical protein OsI_06938 [Oryza sativa Indica Group]
gi|125581839|gb|EAZ22770.1| hypothetical protein OsJ_06445 [Oryza sativa Japonica Group]
gi|215734958|dbj|BAG95680.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741357|dbj|BAG97852.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741414|dbj|BAG97909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 254
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 294 GYANGQTQKEEIDFILGNMQSR----KDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
GY +G + G Q+R K+++ +R L+GIIPG N D ++LDEA+ YL
Sbjct: 178 GYRDGSSPDSTCSSSYGGGQARPGRKKERMKKMVRTLKGIIPGGNQMDTPAVLDEAVRYL 237
Query: 350 QSLKLKAVALGV 361
+SLK++ LGV
Sbjct: 238 KSLKVEVKKLGV 249
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 299 QTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+T++ ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+
Sbjct: 98 RTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 157
Query: 357 VALGV 361
AL V
Sbjct: 158 QALAV 162
>gi|357135599|ref|XP_003569396.1| PREDICTED: transcription factor bHLH144-like [Brachypodium
distachyon]
Length = 245
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 93/280 (33%)
Query: 97 IQPAF--PCGFSEQAAPNEKLGSLQ--------KGLLVFDQSGNQTQLVYSSVCPSVLNT 146
+ PAF P G + PN LG + + ++FD + ++ +++Y + LN
Sbjct: 39 VSPAFGVPAGMTVPQLPN-PLGGFEFQPSKVFPRNFIIFDHNEDKGRIMYHPTLANKLNA 97
Query: 147 PATLKKEVSVNGFLQ-DKAIKRDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLY 205
++N F D+A+ R D ++ EDT EI+ALL
Sbjct: 98 -------ANINAFPSYDQAVCRSCGQ----------DNGNLEENSSSFKEDTREIDALL- 139
Query: 206 SDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNG 265
S+ ++S++D+V ST +P A E
Sbjct: 140 -------SSSEESDNDDVVSTGRTPYAFE------------------------------- 161
Query: 266 GYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALR- 324
SV L+ S N + Y++ E+ I G+M+ D H ++R
Sbjct: 162 ------------SVSLDSSSTL-NSKKMRYSS-----EKSSGIHGSME---DVTHESMRK 200
Query: 325 ---ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+G+IPGA+ D ++L+EA+ YL+ LK++A LGV
Sbjct: 201 MITVLRGVIPGADQLDTPAVLEEAVRYLKFLKMEAKKLGV 240
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+DKI+ +RIL+ +IP N D S+LD+AI+YL++LKL+
Sbjct: 761 RKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQ 803
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+DKI+ L+ LQ ++P N D +S+LDEAIDYL+SL+L+ L
Sbjct: 28 RRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 292 ESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
SG + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL
Sbjct: 80 RSGAKQRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYL 139
Query: 350 QSLKLKAVALGV 361
+ L+L+ L V
Sbjct: 140 KQLQLQVQTLAV 151
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+DKI+ L+ LQ ++P N D +S+LDEAIDYL+SL+L+ L
Sbjct: 28 RRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 292 ESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
SG + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL
Sbjct: 80 RSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYL 139
Query: 350 QSLKLKAVALGV 361
+ L+L+ L V
Sbjct: 140 KQLQLQVQTLAV 151
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 292 ESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
SG + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL
Sbjct: 80 RSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYL 139
Query: 350 QSLKLKAVALGV 361
+ L+L+ L V
Sbjct: 140 KQLQLQVQTLAV 151
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 288 DNDAESGYANGQTQ----KEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSL 341
D +A NG Q K ID N+ + R+ KI+ ++ LQ +IP +N D S+
Sbjct: 71 DKNAFENKRNGGRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASM 130
Query: 342 LDEAIDYLQSLKLKAVALGV 361
LDEAI+YL+ L+L+ L V
Sbjct: 131 LDEAIEYLKQLQLQVQTLAV 150
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 311 NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
N+Q R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 8 NLQRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 52
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP +N D S+LDEAIDYL+SL+L+ + +
Sbjct: 268 RRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMMSM 316
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R+D+I+ ++ LQ +IP +N D S+LDEAIDYL+SL+L+
Sbjct: 268 RRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQV 311
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 245 EISEEVASSDGPNKRQKLLNGGYNKSSQTDTA---CSVQLEGSHECDNDAESGYANGQTQ 301
E+ + + S P +R L K +TD + C L+GS + + +++
Sbjct: 250 ELMKMIVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTLKGSKQ----VRGSTSTKRSR 305
Query: 302 KEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
E+ + + + R+D+I+ ++ LQ +IP N D S+LDEAI+YL++L+L+ + +
Sbjct: 306 AAEVHNL--SERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSM 363
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 370 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 418
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 377 RRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 425
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 306 DFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
DF + + R+D+I+ LR LQ ++P D +S+LDEAIDYL+SL+L+ L
Sbjct: 23 DFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+DKI+ +R L+ +IP N D S+LD+AIDYL++LKL+
Sbjct: 218 RKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQ 260
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+DKI+ +R L+ +IP N D S+LD+AIDYL++LKL+
Sbjct: 218 RKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQ 260
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 288 DNDAESGYANGQTQ----KEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSL 341
D +A NG Q K ID N+ + R+ KI+ ++ LQ +IP +N D S+
Sbjct: 71 DKNAFENKRNGGRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASM 130
Query: 342 LDEAIDYLQSLKLKAVALGV 361
LDEAI+Y++ L+L+ L V
Sbjct: 131 LDEAIEYMKQLQLQVQTLAV 150
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 290 DAESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAID 347
+ +G + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+
Sbjct: 74 NKRNGAKQRNSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE 133
Query: 348 YLQSLKLKAVALGV 361
YL+ L+L+ L V
Sbjct: 134 YLKQLQLQVQTLAV 147
>gi|224114345|ref|XP_002316733.1| predicted protein [Populus trichocarpa]
gi|222859798|gb|EEE97345.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 36/49 (73%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ++ K+ T ++ L+GI+PG + + +++LDEA+ YL+SLK++ LGV
Sbjct: 174 ERKRQKMKTMVKTLRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKLGV 222
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP +N D S+LDEAIDYL+ L+L+ + +
Sbjct: 744 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMMSI 792
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 44 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 86
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 306 DFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
DF + + R+D+I+ LR LQ ++P D +S+LDEAIDYL+SL+L+ L
Sbjct: 22 DFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 351 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 399
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 353 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 353 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVA 358
+ R++KI+ +R L+ +IP N D S+LD+AIDYL++LKL+ A
Sbjct: 346 KKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQA 391
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 465 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 507
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP +N D S+L EAIDYL+SL+L+ + +
Sbjct: 391 RKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSM 439
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ KI+ L+ LQ +IP +N D S+LDEAI+YL+ L+L+ L V
Sbjct: 103 RRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMV 149
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP +N D S+L EAIDYL+SL+L+ + +
Sbjct: 385 RKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSM 433
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 328 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 370
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 328 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 370
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 286 RRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 334
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 291 AESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
A+ G + +++ E+ + + + R+D+I+ +R LQ +IP N D S+LDEAI+YL+
Sbjct: 437 AKGGTGSKRSRAAEVHNL--SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 494
Query: 351 SLKLK 355
+L+L+
Sbjct: 495 TLQLQ 499
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 273 RRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 321
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 291 AESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
A+ G + +++ E+ + + + R+D+I+ +R LQ +IP N D S+LDEAI+YL+
Sbjct: 452 AKGGTGSKRSRAAEVHNL--SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 509
Query: 351 SLKLK 355
+L+L+
Sbjct: 510 TLQLQ 514
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP +N D S+LDEAI+YL+ L+L+
Sbjct: 27 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQ 69
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 291 AESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
A+ G + +++ E+ + + + R+D+I+ +R LQ +IP N D S+LDEAI+YL+
Sbjct: 316 AKGGTGSKRSRAAEVHNL--SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 373
Query: 351 SLKLK 355
+L+L+
Sbjct: 374 TLQLQ 378
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 247 SEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEID 306
S E AS D P+ R++ + + +D +C++ A G K
Sbjct: 411 SVEGASDDPPHNRKRKCHDTEDSEWHSDDV-------EEDCNDVKRVTSARGAGSKRSRA 463
Query: 307 FILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ N+ + R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 464 AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 514
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 280 RRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 328
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 309 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 351
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 318 RRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 366
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 467 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 509
>gi|225463438|ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isoform 2 [Vitis vinifera]
gi|225463440|ref|XP_002275365.1| PREDICTED: transcription factor bHLH144 isoform 1 [Vitis vinifera]
Length = 244
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 311 NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
N + ++ K+ ++ L+GI+PG++ + +++LDEA+ YL+SLK++ LGV
Sbjct: 187 NSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGV 237
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+++
Sbjct: 230 RRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQ 272
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 279 VQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDP 338
+ E + E + + + +T+ E+ + + + R+D+I+ +R LQ +IP N D
Sbjct: 298 AECEATEETKSSSRRYGSKRRTRAAEVHNL--SERRRRDRINEKMRALQELIPHCNKTDK 355
Query: 339 LSLLDEAIDYLQSLKLK 355
S+LDEAI+YL+SL+++
Sbjct: 356 ASILDEAIEYLKSLQMQ 372
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP +N D S+LDEAI+YL+ L+L+ + +
Sbjct: 605 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMSI 653
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 291 AESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQ 350
A G + +++ E+ + + + R+D+I+ +R LQ +IP N D S+LDEAI+YL+
Sbjct: 455 ARGGTGSKRSRAAEVHNL--SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 512
Query: 351 SLKLK 355
+L+L+
Sbjct: 513 TLQLQ 517
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+++
Sbjct: 241 RRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQ 283
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 309 LGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
L + + R+D+I+ L+ LQ ++P D +S+LDEAIDYL+SL+L+
Sbjct: 145 LVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 191
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+D+I+ +R LQ +IP D +S+LDEAIDYL++L+L+ + +
Sbjct: 395 RRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMSM 441
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 282 EGSHECDNDAESGY---------------ANGQTQKEEIDFILGNMQSRKDKIHTALRIL 326
E HECD ++E G ++ +T+ E+ + + + R+ +I+ ++ L
Sbjct: 104 ETDHECDCESEEGLEALIDEMSVKPAPPRSSKRTRAAEVHNL--SEKRRRSRINEKMKAL 161
Query: 327 QGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
Q +IP ++ D S+LDEAI+YL+ L+L+ L V
Sbjct: 162 QNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGLSV 196
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+D+I+ L+ LQ ++P D +S+LDEAIDYL+SL+L+ L
Sbjct: 29 RRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 279 VQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDP 338
+ E + E + + + +T+ E+ + + + R+D+I+ +R LQ +IP N D
Sbjct: 314 AECEATEETKSSSRRYGSKRRTRAAEVHNL--SERRRRDRINEKMRALQELIPHCNKTDK 371
Query: 339 LSLLDEAIDYLQSLKLK 355
S+LDEAI+YL+SL+++
Sbjct: 372 ASILDEAIEYLKSLQMQ 388
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 331 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 373
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 331 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 373
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 383 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 423
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 445 RKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 487
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 331 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 373
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP +N D S+L+EAI+YL+SL+ +
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQ 412
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 331 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 373
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ ++P N D S+LDEAI+YL+SL+L+
Sbjct: 247 RRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQ 289
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 331 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 373
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+D+I+ L+ LQ ++P D +S+LDEAIDYL+SL+L+ L
Sbjct: 23 RRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQG++PG + D S+LDEA +YL+ L+ + AL
Sbjct: 214 RQRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKAL 260
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R+D+I+ LR LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 239 RRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQV 282
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R++KI+ +R L+ +IP N D S+LD+AIDYL++LKL+
Sbjct: 336 KKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQ 378
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 338 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 380
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI YL+SL+L+ + +
Sbjct: 318 RRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSM 366
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 478 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 520
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA--VALG 360
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+ +A+G
Sbjct: 172 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMG 221
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 306 DFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
DF + + R+D+I+ L+ LQ ++P D +S+LDEAIDYL+SL+L+ L
Sbjct: 23 DFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 343 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 385
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 343 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 385
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R+D+I+ LR LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 235 RRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQV 278
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP +N D S+L+EAI+YL+SL+ +
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQ 412
>gi|147767796|emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]
Length = 289
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%)
Query: 311 NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
N + ++ K+ ++ L+GI+PG++ + +++LDEA+ YL+SLK++ LGV
Sbjct: 232 NSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGV 282
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA--VALG 360
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+ +A+G
Sbjct: 362 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMAMG 411
>gi|357143503|ref|XP_003572944.1| PREDICTED: transcription factor bHLH144-like [Brachypodium
distachyon]
Length = 268
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+R L+GIIPG N D ++LDEA+ YL+SLK++ LGV
Sbjct: 225 VRTLKGIIPGGNQMDTPAVLDEAVKYLKSLKVEVKKLGV 263
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ LR LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 238 RRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 280
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ LR LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 414 RRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 456
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 191 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 233
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL++L+L+ + +
Sbjct: 311 RRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSM 359
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 415 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 457
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+DKI+ +R LQ +IP ++ D S+LD+AI+YL++L+L+
Sbjct: 390 RKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQ 432
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R+D+I+ LR LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 338 RRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQV 381
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 322 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 364
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 324 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 366
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 450 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 492
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 394 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 436
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+ + +
Sbjct: 303 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVMSM 351
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 394 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 436
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+
Sbjct: 223 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 265
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 321
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+
Sbjct: 223 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 265
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL++L+L+ + +
Sbjct: 326 RRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSM 374
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 279 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 321
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+++
Sbjct: 245 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQ 287
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+
Sbjct: 294 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 288 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 330
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 462 RRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 504
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I T +RILQ ++PG D S+LDEAI Y++ LK + A+
Sbjct: 301 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 345
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 269 KSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRIL 326
KS D+AC V+ E E + D + + + + N + R+D+I+ ++ L
Sbjct: 226 KSIDEDSACHVESENQEE-EQDTKRVANRSHSARRSRAAAIHNQSERRRRDRINEKMKAL 284
Query: 327 QGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
Q ++P A+ D S+LDE I+YL+ L+ + + V
Sbjct: 285 QKLVPNASKTDKASMLDEVIEYLKQLQAQVQFMSV 319
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+++
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQ 258
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I T +RILQ ++PG D S+LDEAI Y++ LK + A+
Sbjct: 302 RRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 346
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 269 KSSQTDTACSVQLEGSHECDNDAESGYANGQ---TQKEEIDFILGNM-QSRKDKIHTALR 324
K++ D+AC GS D D E+ G+ T++ I + R+D+I+ ++
Sbjct: 188 KTTDEDSACH---GGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQKMK 244
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
LQ ++P ++ D S+LDE I+YL+ L+ + + V
Sbjct: 245 TLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 281
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+
Sbjct: 294 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+++
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQ 249
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 261 RRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQ 303
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 18/96 (18%)
Query: 282 EGSHECDNDAESGY----------------ANGQTQKEEIDFILGNMQSRKDKIHTALRI 325
E HECD ++E G ++ +++ E+ + + + R+ +I+ ++
Sbjct: 126 ETDHECDCESEEGLEALIEEVQTKAAPPRSSSKRSRAAEVHNL--SEKRRRSRINEKMKA 183
Query: 326 LQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 184 LQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 219
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 304 EIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
++ F+ N R+D+I+ ++ LQ ++P ++ D S+LDE IDYL+ L+
Sbjct: 2 KLRFVRKNNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQ 51
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 305 IDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
++F + + R+D+I+ L+ LQ ++P D +S+LDEAIDYL+SL+++ L
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQML 73
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP +N D S+L+EAI+YL+ L+L+
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQ 75
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 30 RRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+++
Sbjct: 46 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQ 88
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 269 KSSQTDTACSVQLEGSHECDNDAESGYANGQ---TQKEEIDFILGNM-QSRKDKIHTALR 324
K++ D+AC GS D D E+ G+ T++ I + R+D+I+ ++
Sbjct: 150 KTTDEDSACH---GGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSERRRRDRINQKMK 206
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
LQ ++P ++ D S+LDE I+YL+ L+ + + V
Sbjct: 207 TLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSV 243
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+++
Sbjct: 325 RRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQ 367
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 266 GYNKSSQTDTACSVQLEGSHECDNDAE-----SGYANGQTQKEEIDFILGNM--QSRKDK 318
G SQ +C + + S D D + + + ++ K + NM + R+D+
Sbjct: 217 GNGDRSQLKRSCHLAADCSVSPDEDMDDEPGATRRSAARSAKRSRTAEVHNMSERRRRDR 276
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 277 INEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 313
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+ + +
Sbjct: 129 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSM 177
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
R+D+I+ +R LQ +IP D +S+LDEAIDYL++L+L+
Sbjct: 26 RRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQ 66
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 30 RRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 45.4 bits (106), Expect = 0.040, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL++L+L+
Sbjct: 14 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQ 56
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 174 RRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 220
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 282 EGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSL 341
E S E A S + +++ E+ + + + R+ +I+ ++ LQ +IP +N D S+
Sbjct: 165 EPSEEMSKPAPSRSSTKRSRAAEVHNL--SEKRRRSRINEKMKALQNLIPNSNKTDKASM 222
Query: 342 LDEAIDYLQSLKLKAVALGV 361
LDEAI+YL+ L+L+ L +
Sbjct: 223 LDEAIEYLKQLQLQVQMLSM 242
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 184 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 232
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 184 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 232
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 170 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 216
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ ++P N D S+LDEAI+YL+SL+L+
Sbjct: 153 RRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQ 195
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 277 CSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGAN 334
C + GS E + A + G K + N+ + R+ KI+ ++ LQ +IP +N
Sbjct: 75 CDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSN 134
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALGV 361
D S+LDEAI+YL+ L+L+ L +
Sbjct: 135 KTDKASMLDEAIEYLKQLQLQVQMLSM 161
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 277 CSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGAN 334
C + GS E + A + G K + N+ + R+ KI+ ++ LQ +IP +N
Sbjct: 75 CDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSN 134
Query: 335 GKDPLSLLDEAIDYLQSLKLKAVALGV 361
D S+LDEAI+YL+ L+L+ L +
Sbjct: 135 KTDKASMLDEAIEYLKQLQLQVQMLSM 161
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ ++P N D S+LDEAI+YL+SL+++
Sbjct: 258 RRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 300
>gi|255557377|ref|XP_002519719.1| conserved hypothetical protein [Ricinus communis]
gi|223541136|gb|EEF42692.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 35/49 (71%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ++ K+ ++ L+GI+PG + + +++LDEA+ YL+SLK++ +GV
Sbjct: 186 ERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGV 234
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ KI+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 115 KRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 163
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 123 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 169
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 156 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ I+PG + D S+LDEA +YL+ L+ + AL
Sbjct: 401 RQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKAL 447
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I+ +R+LQ ++PG + D S+LDEA +YL+ L+ + AL
Sbjct: 352 RRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 396
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ KI+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 38 RRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 84
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ KI+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 93 KRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 141
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 156 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 387
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ ++ LQ ++P A+ D S+LDE I+YL+ L+ + A+ V
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAMSV 305
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 168 RRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQMLSA 214
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 345 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 387
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 133 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 179
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 152 RRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 198
>gi|413955365|gb|AFW88014.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413955366|gb|AFW88015.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 316
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 180 EFDENHISGKECE-MHEDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYE 238
E + + +E E +HE+T+EI+ALL S D+ + E+ P A E
Sbjct: 125 ETNVTDVGAEETEGVHENTDEIDALLDSSDSDEGPH-------ELDRARRQPAA-----E 172
Query: 239 KHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHE-----CDNDAES 293
++E A S P K+++L S DTA S + + S E D DA+S
Sbjct: 173 NETSSVESVASAAGSAPPAKKRRL--SSCTDRSVVDTASSARPDHSVEQKPLASDCDAQS 230
Query: 294 GYANGQTQKEEIDF---------ILGNMQSRKDK------IHTALRILQGIIPGANGKDP 338
+ + F S D+ I + L+ I+PG KD
Sbjct: 231 CCVGEVVESGRLRFSPGEGEGEVEAAEGDSPDDQRRRRERIQETVAALRNIVPGGTAKDA 290
Query: 339 LSLLDEAIDYLQSLKLKAVALGV 361
++LDEAI YLQ LKLK LG
Sbjct: 291 TAVLDEAICYLQYLKLKVKTLGA 313
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 149 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 197
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDE I+YL+SL+++
Sbjct: 240 RRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQ 282
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 376
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+LDE I+YL+SL+++
Sbjct: 334 RRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQ 376
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 376
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP D S+LDEAI+YL+SL+L+
Sbjct: 196 RRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQ 238
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 338 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 380
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 199 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 243
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 206 KRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 137 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 181
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 135 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEA +YL+ L+ + AL
Sbjct: 287 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 333
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +R+LQ ++PG D S+LDEAI Y++ LKL+ L
Sbjct: 450 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTL 494
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 156 KRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 204
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEA +YL+ L+ + AL
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+ KI +R+L+ +IPG N D ++LDEAI+Y++ L+L+ L
Sbjct: 398 RRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 442
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RILQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 189 RRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSL 233
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +R+LQ ++PG + D S+LDEA +YL+ L+ + AL
Sbjct: 350 RRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 394
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+YL++L+++
Sbjct: 276 RRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQ 318
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEA +YL+ L+ + AL
Sbjct: 314 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 360
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 116 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 164
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 224 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 266
>gi|226495211|ref|NP_001145247.1| uncharacterized protein LOC100278531 [Zea mays]
gi|195653633|gb|ACG46284.1| hypothetical protein [Zea mays]
Length = 226
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKD-PLSLLDEAIDYLQSLKLK 355
+ +K+++ +R L+GIIPG + D P ++LDEA+ YL+SLK++
Sbjct: 172 EKKKERVKKMVRTLKGIIPGGDRMDTPAAVLDEAVRYLKSLKVE 215
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 332 RRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQ 374
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 44.3 bits (103), Expect = 0.089, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP +N D S+LDEAI+YL+ L+L+
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQ 75
>gi|413935583|gb|AFW70134.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|413943836|gb|AFW76485.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 226
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKD-PLSLLDEAIDYLQSLKLK 355
+ +K+++ +R L+GIIPG + D P ++LDEA+ YL+SLK++
Sbjct: 172 EKKKERVKKMVRTLKGIIPGGDRMDTPAAVLDEAVRYLKSLKVE 215
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 207 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 206 KRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RILQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 175 RRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 219
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 302 RRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKAL 346
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 304 RRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 348
>gi|242096204|ref|XP_002438592.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
gi|241916815|gb|EER89959.1| hypothetical protein SORBIDRAFT_10g022460 [Sorghum bicolor]
Length = 270
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 243 TLEISEEVASSDGPNKRQKLLNG---GYNKSSQTDTACSVQLEGSHECDNDAESGYANGQ 299
T EI +++ DG ++ L G G D+ CS GYA G
Sbjct: 162 TDEIDALMSTEDGDDEDDVLSTGRTPGCRAGGSPDSTCS-------------SGGYAGGG 208
Query: 300 TQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ E G + +K+++ +R L+GIIPG + D ++LDEA+ YL+SLK++
Sbjct: 209 RKHE-----TGGGEKKKERMKKMVRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKA 263
Query: 360 GV 361
G
Sbjct: 264 GA 265
>gi|380006415|gb|AFD29598.1| DEL65 [Gossypium arboreum]
Length = 620
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 292 ESGYANGQTQKEEIDFILGNM----QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAID 347
E+ + E D I GN + R++KI+ L IL+ ++P N D +S+LD I+
Sbjct: 417 ETNAVRDAAWRPEADEICGNHVLSERKRREKINERLMILKSLVPANNKADKVSILDVTIE 476
Query: 348 YLQSLKLKAVAL 359
YLQ+L+ + L
Sbjct: 477 YLQALERRVAEL 488
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 206 KRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 254
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 186 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 234
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R++++ LR+LQ ++PG N D S+LDEA YL+ LK
Sbjct: 294 RRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLK 332
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R++++ LR+LQ ++PG N D S+LDEA YL+ LK
Sbjct: 293 RRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLK 331
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 247 SEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEID 306
S + S++ P +R++ + G + ++ + G E N +G +K
Sbjct: 170 SSSLCSNNDPKRRRREEDDGVDYQTEEN--------GEGESTNRRHAGKGRLMNKKRSRS 221
Query: 307 FILGNM--QSRKDKIHTALRILQGIIPGANGK-DPLSLLDEAIDYLQSLKLKAVALGV 361
+ N+ + R+D+I+ +R LQ ++P N + D S+L+E I+YL+SL+++ A+ +
Sbjct: 222 SEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSM 279
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ +IP N D S+L+EAI+YL++L+L+
Sbjct: 279 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQ 321
>gi|302771387|ref|XP_002969112.1| hypothetical protein SELMODRAFT_409950 [Selaginella moellendorffii]
gi|300163617|gb|EFJ30228.1| hypothetical protein SELMODRAFT_409950 [Selaginella moellendorffii]
Length = 275
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 47/245 (19%)
Query: 123 LVFDQSGNQTQLVYSS-----VCPSVL----NTPA--TLKKEVSVNGFLQDKAIKRDQFT 171
++FDQ G++ +V S V P L NT TL+ +S G LQDKA +
Sbjct: 45 VLFDQCGSEKVVVVHSDGVSPVLPDALVHDHNTTGSQTLQALLSSAG-LQDKACDLQVYK 103
Query: 172 SVKPLLHEEFDENHISGKECEMHEDTEE---INALLYSDGDDDYSNGDDSEDDEVKSTDH 228
+ EF+ +H + E+ + E+ N+ + + DD +S+++EV +
Sbjct: 104 NAMAAALLEFESSHSGEERLELFDSMEQPLQANSGSWQENTDDLDALMESDEEEVSELNS 163
Query: 229 SPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECD 288
+ V E H +E+S ++S + + G + D SV+ S +
Sbjct: 164 ASVTSALTREDHSGGVELSGYLSSEGETDGK------GRSSRRSRDCRLSVRSTRSSK-- 215
Query: 289 NDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDY 348
+SR+ I +++L+ IIPG G + S+L+E I Y
Sbjct: 216 ------------------------KSRRQTIKYKIQVLRNIIPGGAGMEAASVLEETIRY 251
Query: 349 LQSLK 353
+ SL+
Sbjct: 252 ITSLE 256
>gi|224286131|gb|ACN40776.1| unknown [Picea sitchensis]
Length = 484
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 39/200 (19%)
Query: 188 GKECEMHEDTEEINALLYSDGDDDYSNGDD-----SEDDEVKSTDHSPVA--IEGKYEKH 240
G + + HEDT ++ ALL SD ++D S G + D + + D + ++ I K +
Sbjct: 276 GYQSQSHEDTRDLEALLGSDEEEDDSTGHTPSEAITNDQQSGTQDEAHISNGIPTKKRRC 335
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTAC---------SVQLEGSHECDNDA 291
+ +EV + +LNG +D C +QLE C+
Sbjct: 336 ECMEFGEQEVDFIPSAIQETAVLNG----KCSSDGVCFPPVASQESGIQLEC---CNTVK 388
Query: 292 ESGYANGQTQKEEIDFILGNMQS----------------RKDKIHTALRILQGIIPGANG 335
+S Y + Q D + GN S RK+K+ A+ +L+ I+P +
Sbjct: 389 DSDYRDEQFCDYSTDNMTGNGSSNNSASKVGQPSSRRKLRKEKVKKAINLLRSIVPEGHS 448
Query: 336 KDPLSLLDEAIDYLQSLKLK 355
D ++L+ A +L+SL+LK
Sbjct: 449 MDTAAVLEVASQHLKSLQLK 468
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RILQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 163 RRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 207
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L
Sbjct: 207 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|115438701|ref|NP_001043630.1| Os01g0626900 [Oryza sativa Japonica Group]
gi|54290253|dbj|BAD61185.1| unknown protein [Oryza sativa Japonica Group]
gi|54290353|dbj|BAD61157.1| unknown protein [Oryza sativa Japonica Group]
gi|113533161|dbj|BAF05544.1| Os01g0626900 [Oryza sativa Japonica Group]
gi|125526921|gb|EAY75035.1| hypothetical protein OsI_02932 [Oryza sativa Indica Group]
gi|125571244|gb|EAZ12759.1| hypothetical protein OsJ_02677 [Oryza sativa Japonica Group]
gi|215701144|dbj|BAG92568.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 245
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 317 DKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+++ + +L+GIIPG + D S+++EA+ YL+ LK++A LGV
Sbjct: 196 ERMRNMVTVLRGIIPGGDQLDTASVIEEAVRYLKFLKMEAKKLGV 240
>gi|357476411|ref|XP_003608491.1| Transcription factor bHLH144 [Medicago truncatula]
gi|355509546|gb|AES90688.1| Transcription factor bHLH144 [Medicago truncatula]
Length = 238
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 93/289 (32%)
Query: 78 ILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYS 137
+LPP + + +P+ N +QP+ C K +VFDQ+ Q ++++
Sbjct: 36 VLPPSARQI--TPFERFN-LQPSEVC---------------PKNFIVFDQTDQQNRILFH 77
Query: 138 SVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHISGKECEMH--- 194
N+P GF +D F+++ I+ E E+
Sbjct: 78 PATTYKFNSP----------GFNSHATCNQD------------FEKDKINQMETELSSSF 115
Query: 195 -EDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASS 253
ED+++I+ALL + DE++ D V+ +EK D T S+ +S
Sbjct: 116 VEDSKDIDALL------------SLDSDELEDYDEEEVSTARTHEKDDST---SDTCSSY 160
Query: 254 DGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQ 313
+++++LL+ +N S GY + +K+ ++
Sbjct: 161 CTKSRKKRLLSSAHNSS--------------------GTKGYCISE-KKQHLE------- 192
Query: 314 SRKDKIHTALRILQGIIP-GANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ++IL+ I+P G N D +++LDEA+ YL+SLK++ GV
Sbjct: 193 -----MKRMVKILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGV 236
>gi|357476409|ref|XP_003608490.1| Transcription factor bHLH144 [Medicago truncatula]
gi|355509545|gb|AES90687.1| Transcription factor bHLH144 [Medicago truncatula]
Length = 262
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 93/289 (32%)
Query: 78 ILPPRFQNLVASPYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYS 137
+LPP + + +P+ N +QP+ C K +VFDQ+ Q ++++
Sbjct: 60 VLPPSARQI--TPFERFN-LQPSEVC---------------PKNFIVFDQTDQQNRILFH 101
Query: 138 SVCPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHISGKECEMH--- 194
N+P GF +D F+++ I+ E E+
Sbjct: 102 PATTYKFNSP----------GFNSHATCNQD------------FEKDKINQMETELSSSF 139
Query: 195 -EDTEEINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASS 253
ED+++I+ALL + DE++ D V+ +EK D T S+ +S
Sbjct: 140 VEDSKDIDALL------------SLDSDELEDYDEEEVSTARTHEKDDST---SDTCSSY 184
Query: 254 DGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQ 313
+++++LL+ +N S GY + +K+ ++
Sbjct: 185 CTKSRKKRLLSSAHNSS--------------------GTKGYCISE-KKQHLE------- 216
Query: 314 SRKDKIHTALRILQGIIP-GANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ++IL+ I+P G N D +++LDEA+ YL+SLK++ GV
Sbjct: 217 -----MKRMVKILRNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGV 260
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 303 RRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 298 RRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 342
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 297 RRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 341
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 230 PVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQT---DTACSVQLEGSHE 286
PV++E K +L E+ S K K+ +G N+ Q + C+ +
Sbjct: 167 PVSVENFSRKRPQSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDD 226
Query: 287 CDNDAE-------SGYANGQ---TQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGK 336
C+ E S +NG+ ++ D + R+++I+ LRILQ ++P
Sbjct: 227 CNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV 286
Query: 337 DPLSLLDEAIDYLQSLKLK 355
D ++L+EA+ Y++ L+L+
Sbjct: 287 DISTMLEEAVQYVKFLQLQ 305
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEA +Y + L+ + AL
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKAL 331
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D +LDEAIDYL+ L+L+ L +
Sbjct: 85 KRRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSL 133
>gi|13346182|gb|AAK19613.1|AF336280_1 GHDEL65 [Gossypium hirsutum]
Length = 620
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 292 ESGYANGQTQKEEIDFILGNM----QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAID 347
E+ + E D I GN + R++KI+ L +L+ ++P N D +S+LD I+
Sbjct: 417 ETNAVRDAAWRPEADEICGNHVLSERKRREKINERLMMLKSLVPANNKADKVSILDVTIE 476
Query: 348 YLQSLKLKAVAL 359
YLQ+L+ + L
Sbjct: 477 YLQTLERRVAEL 488
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ LK + AL
Sbjct: 293 RRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 337
>gi|242093086|ref|XP_002437033.1| hypothetical protein SORBIDRAFT_10g019120 [Sorghum bicolor]
gi|241915256|gb|EER88400.1| hypothetical protein SORBIDRAFT_10g019120 [Sorghum bicolor]
Length = 233
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+R L+GIIPG + D ++LDEA+ YL+SLK++ LG
Sbjct: 190 VRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLGA 228
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LKL+
Sbjct: 12 RHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQ 54
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P +N D S+LDE I+YL+ L+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQ 343
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P +N D S+LDE I+YL+ L+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQ 343
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 132 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 170
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+ L+
Sbjct: 18 RKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQ 58
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+ L+
Sbjct: 18 RKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQ 58
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+ +I R+L+ ++PG + D +S+L++AIDY+Q LK
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLK 39
>gi|226493830|ref|NP_001142297.1| uncharacterized protein LOC100274466 [Zea mays]
gi|194708082|gb|ACF88125.1| unknown [Zea mays]
gi|238008516|gb|ACR35293.1| unknown [Zea mays]
gi|413944071|gb|AFW76720.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413944072|gb|AFW76721.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 270
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+R L+GIIPG + D ++LDEA+ YL+SLK++ LG
Sbjct: 227 VRTLKGIIPGVDRMDTPAVLDEAVRYLKSLKVEVKKLGA 265
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 134 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 174
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 155 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 193
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 42.7 bits (99), Expect = 0.26, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LKL+
Sbjct: 42 RHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQ 84
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 142 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 180
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D S+LDEA YL+ L+ + AL
Sbjct: 296 RRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQAL 340
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQS 351
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+S
Sbjct: 348 RRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKS 386
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 141 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 181
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 147 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 185
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++KI +R+LQ ++PG + D S+LDEA YL+ L+ + AL
Sbjct: 198 RKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++KI +R+LQ ++PG + D S+LDEA YL+ L+ + AL
Sbjct: 198 RKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L V
Sbjct: 235 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSV 281
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQS 351
+ R+D+I+ ++ LQ +IP +N D S+LDEAI+YL+S
Sbjct: 348 RRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKS 386
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 43 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 81
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA +YL+ LK
Sbjct: 363 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLK 403
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 114 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 154
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +R+LQ ++PG D S+LDEAI Y++ LK
Sbjct: 381 RRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFLK 419
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 244 LEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKE 303
++ S + S G N ++ G Q++TA +LE S E + A ++ +T+
Sbjct: 298 MDRSRTIGQSTGGNGNKRKGRDGEESECQSETA---ELE-SAEGNKTAPRSGSSRRTRAA 353
Query: 304 EIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
E+ + + + R+++I+ ++ LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 354 EVHNL--SERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQ 403
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 215 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 261
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 192 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 238
>gi|91940088|gb|ABE66390.1| transcription factor [Striga asiatica]
Length = 89
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 QSRKDKIHTALRILQGIIPGA-NGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ +K KI L+IL ++PG + KDP +++++AI YL+S+K + ALG+
Sbjct: 29 RDKKVKIRETLKILGSLVPGLESNKDPATIIEKAIVYLESMKTEVEALGL 78
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA +YL+ LK
Sbjct: 376 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLK 416
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 251 ASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQK-EEIDFIL 309
+++G NK+Q+ NGG + + Q +C + +GY + + ++ + D
Sbjct: 121 TATEGKNKKQRKNNGGLKEEDKAKEEKKDQ----RKCPEEPPTGYIHVRARRGQATDSHS 176
Query: 310 GNMQSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
+ R++KI +++LQ ++PG + +L LDE I+Y+QSL+
Sbjct: 177 LAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQ 221
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ +R LQ +IP N D S+LDEAI+YL+SL+L+
Sbjct: 445 INERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQ 481
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I LR+LQ ++PG D S+LDEA YL+ LK +
Sbjct: 348 RQRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQ 390
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ILQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQ 265
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA +YL+ LK
Sbjct: 392 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLK 432
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 265 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RILQ ++PG D S+LDEA+ Y++ LK + L
Sbjct: 124 RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTL 168
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA +YL+ LK
Sbjct: 380 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLK 420
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA +YL+ LK
Sbjct: 380 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLK 420
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LK + L
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 127 RRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 165
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 243 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 289
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 104 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 144
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 271 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 317
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 109 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 149
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+ KI +R+L+ +IPG N D ++LDEAI+Y++ L+L+ L
Sbjct: 24 RHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 154 RREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|242058101|ref|XP_002458196.1| hypothetical protein SORBIDRAFT_03g028550 [Sorghum bicolor]
gi|241930171|gb|EES03316.1| hypothetical protein SORBIDRAFT_03g028550 [Sorghum bicolor]
Length = 245
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 317 DKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+KI +L+GIIPG + D S+L+EA+ YL+ LK+++ LG+
Sbjct: 196 EKIRNVATVLKGIIPGGDQLDTSSVLEEAVRYLKFLKMESKKLGM 240
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y+ LK
Sbjct: 114 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVXFLK 154
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 310 GNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
G+ + R D++ +R LQ ++P + D +S+LD AI+Y++SL+L+ + +
Sbjct: 128 GSKRRRSDELCNKMRTLQQLVPDCHKTDKVSVLDNAIEYMKSLQLQFKVMSM 179
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA YL+ LK
Sbjct: 328 RQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLK 368
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA YL+ LK
Sbjct: 382 RQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLK 422
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ ++PG D +S+LDEAI Y++ LK
Sbjct: 58 RERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLK 98
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LK
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 209
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LK
Sbjct: 168 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 208
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 338 RREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 384
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D ++LDEA YL+ LK + AL
Sbjct: 243 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 287
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 295 YANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
++ G +Q+ +D R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 139 WSGGGSQRLTMD----TYDKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 193
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+D+I+ ++ LQ ++P ++ D S+LDE IDYL+ L+
Sbjct: 285 RKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQ 325
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +RILQ ++PG D S+LDEAI Y++ LK
Sbjct: 125 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLK 165
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 310 GNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
G + R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 98 GVARRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 147
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 222 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 268
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I +R+LQ ++PG D S+LDEAI Y++ LK
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLK 209
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D ++LDEA YL+ LK + AL
Sbjct: 287 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 331
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 274 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 320
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 313 QSRKDKIHTALRILQGI--IPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ +R LQ + IP N D S+LDEAI+YL+SL+L+
Sbjct: 176 RRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQ 220
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 338 RREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVLSM 384
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVA 358
+ R+++I+ LR LQG++P D +++L+EAI+Y++ L+L+ ++
Sbjct: 253 RQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQLLS 298
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 266 GYNKSSQTDTACSVQLEGSHECDNDAE--SGYANGQTQKEEIDFILGNM-QSRKDKIHTA 322
G ++++T TA H D+D + +G ++ T++ I + R+DKI+
Sbjct: 243 GSQENTKTATAVDENDSVCHSDDDDKQKANGKSSVSTKRSRAAAIHNQSERKRRDKINQR 302
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 303 MKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 333
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D ++LDEA YL+ LK + AL
Sbjct: 315 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++++ LR+LQ ++PG + D ++LDEA YL+ LK + AL
Sbjct: 313 RRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 357
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 338 RREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 384
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ +++
Sbjct: 268 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSM 312
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 335 RREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 381
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 338 RREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 384
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+ + +R LQ ++P D SLLDEAI Y+++L+L+ + +
Sbjct: 239 RKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+ + +R LQ ++P D SLLDEAI Y+++L+L+ + +
Sbjct: 239 RKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ ++PG D +S+LDEAI Y++ LK
Sbjct: 53 RDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLK 93
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I ++ILQ ++PG D S+LDEAI Y++ LK
Sbjct: 148 RRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLK 186
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++KI+ L+ LQ ++P D +++LDEAI Y+Q L+L+ L
Sbjct: 460 RREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLL 504
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ +++
Sbjct: 257 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSM 301
>gi|268374460|gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis]
Length = 241
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ++ K+ ++ L+GI+PG + + + ++DEA+ YL+SLK++ +G
Sbjct: 188 ERKRQKMKKMVKALRGIVPGGDQMNTVMVIDEAVRYLKSLKVEVQKIGA 236
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 300 RREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 346
>gi|219362395|ref|NP_001136920.1| uncharacterized protein LOC100217078 [Zea mays]
gi|194696182|gb|ACF82175.1| unknown [Zea mays]
gi|194697626|gb|ACF82897.1| unknown [Zea mays]
gi|413954334|gb|AFW86983.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413954335|gb|AFW86984.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
gi|413954336|gb|AFW86985.1| putative HLH DNA-binding domain superfamily protein isoform 3 [Zea
mays]
Length = 264
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+R L+GIIPG + D ++LDEA+ YL+SLK++ G
Sbjct: 221 VRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKAGA 259
>gi|77556979|gb|ABA99775.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 387
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 303 EEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ ID + R+ KI R LQ ++PG + + S LD+ I Y++SL+ + A+ V
Sbjct: 214 DSIDELFTKFHRRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSV 272
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 339 RREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQLQVKVLSM 385
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L
Sbjct: 337 RREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVL 381
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 320
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAV 357
+ R+ +I +ILQ ++PG D +S+L+EAI+Y++ LK + +
Sbjct: 47 RERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQVL 91
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 278 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 324
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 282 EGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSL 341
G +C D +S YA + R+++I+ LRILQ ++P D ++
Sbjct: 156 RGHKQCSKDTQSLYA----------------KRRRERINERLRILQQLVPNGTKVDISTM 199
Query: 342 LDEAIDYLQSLKLK 355
L+EA+ Y++ L+L+
Sbjct: 200 LEEAVQYVKFLQLQ 213
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 55 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 99
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+++I LR+LQ ++PG D S+LDEA YL+ L+
Sbjct: 330 RQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQ 370
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 122 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 166
>gi|297805516|ref|XP_002870642.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
gi|297316478|gb|EFH46901.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
Length = 637
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++K++ IL+ IIP N D +S+LD+ I+YLQ L+ + L
Sbjct: 447 KKRREKLNERFMILRSIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 41.2 bits (95), Expect = 0.87, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 311 NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
N+ +D+I LR LQ +IP + +D S+L++A++YL++LKL+
Sbjct: 29 NVSRPRDRIKGKLRALQELIPNCHKQDRPSMLEDAVEYLKALKLQ 73
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 282 EGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSL 341
G +C D +S YA + R+++I+ LRILQ ++P D ++
Sbjct: 168 RGHKQCSKDTQSLYA----------------KRRRERINERLRILQQLVPNGTKVDISTM 211
Query: 342 LDEAIDYLQSLKLK 355
L+EA+ Y++ L+L+
Sbjct: 212 LEEAVQYVKFLQLQ 225
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 333 RREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 379
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
Q R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 140 QLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 64 KRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 112
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ ++PG D +S+L+EAI+Y++ LK
Sbjct: 47 RERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLK 87
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 64 KRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 112
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 42 KRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 90
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQ 320
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVA 358
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ A
Sbjct: 177 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKA 220
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R++K+ LR LQ ++PG + D S+LDEA YL+ LK
Sbjct: 312 RREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLK 350
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L +
Sbjct: 212 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKVLSM 258
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 56 KRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 104
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+++ L +
Sbjct: 217 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSM 263
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI +++LQ I+PG N GK S+LDE I+Y+QSL+
Sbjct: 139 RARREKISERMKVLQDIVPGCNKVIGK--ASVLDEIINYIQSLQ 180
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE IDY++ L+++ L +
Sbjct: 214 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSM 260
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 257 RREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 303
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 127 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 173
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ ++PG D +S+L+EAI Y++ LK
Sbjct: 46 RERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLK 86
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 334 RREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 334 RREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 198 RRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLSM 244
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 334 RREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
+ R+D+I+ ++ LQ +IP + D S+LD AIDY++SL
Sbjct: 211 ERRRDRINERMKALQELIPHCSKTDKASILDGAIDYMKSL 250
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
R+++I +RILQ ++PG D S+L+EAI Y++ LK
Sbjct: 122 RRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLK 160
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 295
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 213 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 257
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 311 NMQS-----RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
NMQS R+++I+ LR+LQ +IP D ++L+EA+ Y++ L+L+ L
Sbjct: 172 NMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVL 225
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D ++LDE +DY++ L+L+ L +
Sbjct: 117 RRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSM 163
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 312 MQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+Q R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 265 VQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 308
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L +
Sbjct: 205 RRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D S+LDE +DY++ L+L+ L +
Sbjct: 22 RRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVLSM 68
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI +++LQ I+PG N GK S+LDE I+Y+QSL+
Sbjct: 66 RARREKISERMKVLQDIVPGCNKVIGK--ASVLDEIINYIQSLQ 107
>gi|312282945|dbj|BAJ34338.1| unnamed protein product [Thellungiella halophila]
Length = 223
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 180 VLRRIVPGGEDMNTACVLDEAVQYLKSLKIEAQKLGV 216
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 275 TACSVQLE---GSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIP 331
T C +++ GS E D + +++ E+ + + + R+ +I+ ++ LQ +IP
Sbjct: 18 TVCESEVQDALGSSESDPARPARPRGKRSRAAEVHNL--SEKRRRSRINEKMKALQTLIP 75
Query: 332 GANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 76 NSSKTDKASMLDDAIEYLKHLQLQVQMLSM 105
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+
Sbjct: 42 KRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQV 85
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 311 NMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAV 357
+ ++R++KI LR LQ +IP D +++LDEA+ Y+Q LK +
Sbjct: 461 HARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVT 507
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 78
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 231 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 275
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 213 SNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLE-ISEEVASSDGPNKRQKL-----LNGG 266
+NGD S++ + K+ S V + K E E + EE SS N Q+ NGG
Sbjct: 164 NNGDISDNQKKKTRTTSNVQRKKKTEDQKKRGENVEEEGQSSISYNSDQEENSSEEANGG 223
Query: 267 YNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRIL 326
+ +D + + S D +S YA + R+++I+ LRIL
Sbjct: 224 -GSGATSDGGVNRKSRASRGSATDPQSLYA----------------RKRRERINERLRIL 266
Query: 327 QGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
Q ++P D ++L+EA+ Y++ L+L+
Sbjct: 267 QKLVPNGTKVDISTMLEEAVHYVKFLQLQ 295
>gi|9972351|gb|AAG10601.1|AC008030_1 Unknown protein [Arabidopsis thaliana]
gi|12324164|gb|AAG52051.1|AC022455_5 unknown protein; 14666-16092 [Arabidopsis thaliana]
Length = 285
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 242 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 278
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 222 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ KI+ ++ LQ ++P ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 60 KRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 108
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 222 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D ++LDE +DY++ L+L+ L +
Sbjct: 187 RRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSM 233
>gi|18397297|ref|NP_564342.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|42571693|ref|NP_973937.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|75308016|sp|Q9ASX9.1|BH144_ARATH RecName: Full=Transcription factor bHLH144; AltName: Full=Basic
helix-loop-helix protein 144; Short=AtbHLH144;
Short=bHLH 144; AltName: Full=Transcription factor EN
130; AltName: Full=bHLH transcription factor bHLH144
gi|13605563|gb|AAK32775.1|AF361607_1 F1N18.24/F1N18.24 [Arabidopsis thaliana]
gi|18491145|gb|AAL69541.1| F1N18.24/F1N18.24 [Arabidopsis thaliana]
gi|110741245|dbj|BAF02173.1| hypothetical protein [Arabidopsis thaliana]
gi|227202688|dbj|BAH56817.1| AT1G29950 [Arabidopsis thaliana]
gi|332193032|gb|AEE31153.1| transcription factor bHLH144 [Arabidopsis thaliana]
gi|332193033|gb|AEE31154.1| transcription factor bHLH144 [Arabidopsis thaliana]
Length = 251
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 208 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 244
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ +IPG + D +S+L+EAI Y++ LK
Sbjct: 42 RERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLK 82
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 105 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 151
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L +
Sbjct: 146 RRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 192
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 206 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 250
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 332
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 201 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 245
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA++Y++ L+L+
Sbjct: 280 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQ 322
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RILQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 52 RRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSL 96
>gi|297845916|ref|XP_002890839.1| hypothetical protein ARALYDRAFT_473207 [Arabidopsis lyrata subsp.
lyrata]
gi|297336681|gb|EFH67098.1| hypothetical protein ARALYDRAFT_473207 [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 205 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 241
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 151 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSI 197
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 277 RRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 182 RRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVL 226
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+L+ L
Sbjct: 154 RRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P +N D S+LDE IDY++ L+L+ L +
Sbjct: 277 RRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L +
Sbjct: 148 RRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L +
Sbjct: 148 RRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|356512179|ref|XP_003524798.1| PREDICTED: transcription factor bHLH144-like [Glycine max]
Length = 237
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 318 KIHTALRILQGIIPGA-NGKDPLSLLDEAIDYLQSLKLKAVALGV 361
++ +R+L+ I+PG N D +++LDEA+ YL+SLK++ GV
Sbjct: 191 EMKRMVRMLRKIVPGGGNQMDSVAVLDEAVKYLKSLKVEVEQFGV 235
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 309
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 309
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 55 KRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 103
>gi|226507104|ref|NP_001143014.1| uncharacterized protein LOC100275478 [Zea mays]
gi|194702772|gb|ACF85470.1| unknown [Zea mays]
gi|195612944|gb|ACG28302.1| hypothetical protein [Zea mays]
gi|224029439|gb|ACN33795.1| unknown [Zea mays]
gi|414867113|tpg|DAA45670.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414867114|tpg|DAA45671.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 280
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 326 LQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
L+ ++PG KD ++LDEAI YLQ LKLK LG
Sbjct: 242 LRNMVPGGIAKDAAAVLDEAICYLQYLKLKVKTLGA 277
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 55 KRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSM 103
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
++R++KI LR LQ +IP D +++LDEA+ Y+Q LK + L
Sbjct: 12 RARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLL 58
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 309
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 208 GDDDYSNGDDSEDDEVKSTDHSPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQK 261
GD D + + D S S IEG + E + +I + +S+G NKRQK
Sbjct: 44 GDADLTTAANG-DPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQK 102
Query: 262 LLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--------- 312
+ D C +G E ++ Q + D+I
Sbjct: 103 I-----------DEVC----DGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSH 147
Query: 313 ----QSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N +L LDE I+Y+QSL+
Sbjct: 148 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 107 RRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 151
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 268 NKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGN---------MQSRKDK 318
NK + + T+ ++ + H D D ES + D +GN +SR +
Sbjct: 200 NKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAE 259
Query: 319 IHT------------ALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+H ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 260 VHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA++Y++ L+L+
Sbjct: 277 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQ 319
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 20/97 (20%)
Query: 263 LNGGYNKSSQTDTACSVQLEGSHECD----NDAESGYANGQTQKEEIDFILGNMQSRKDK 318
LNGG + S + +++L+G + D +S YA + R++K
Sbjct: 224 LNGGGSSSLDQKDSTTIKLKGKSRSERGSATDPQSIYA----------------RRRREK 267
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ L+ILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 268 INERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 304
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVKVL 200
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 268 NKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGN---------MQSRKDK 318
NK + + T+ ++ + H D D ES + D +GN +SR +
Sbjct: 200 NKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAE 259
Query: 319 IHT------------ALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+H ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 260 VHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 252 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 288
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N GK S+LDE I+Y+QSL+
Sbjct: 144 RARREKISERMKILQDLVPGCNKVIGK--ASVLDEIINYIQSLQ 185
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 223 VKSTDHSPVAIEGKYEKHD---LTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSV 279
V+S VA G ++ L +S S D N Q+L NGG + S + ++
Sbjct: 160 VRSKKSQKVASTGNNDEESNGGLNGPVSSGCCSEDESNASQEL-NGGASSSLSSKGTTTL 218
Query: 280 QLEG----SHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANG 335
G S D +S YA + R+++I+ LRILQ ++P
Sbjct: 219 NSSGKTRASKGAATDPQSLYA----------------RKRRERINERLRILQNLVPNGTK 262
Query: 336 KDPLSLLDEAIDYLQSLKLK 355
D ++L+EA+ Y++ L+L+
Sbjct: 263 VDISTMLEEAVQYVKFLQLQ 282
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 268 NKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGN---------MQSRKDK 318
NK + + T+ ++ + H D D ES + D +GN +SR +
Sbjct: 200 NKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAE 259
Query: 319 IHT------------ALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+H ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 260 VHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
++R+ +I+ LRILQ +IP D ++L+EAI Y++ L L+ L
Sbjct: 124 KNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N GK S+LDE I+Y+QSL+
Sbjct: 144 RARREKISERMKILQDLVPGCNKVIGK--ASVLDEIINYIQSLQ 185
>gi|414587589|tpg|DAA38160.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 308 ILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
I G Q R+ KI ++ LQ +IP +N D S+L EAI+Y ++L+
Sbjct: 226 IQGYKQLRRSKIKEKMKALQSLIPNSNKIDKASMLHEAIEYPKTLQ 271
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
++R+ +I+ LRILQ +IP D ++L+EAI Y++ L L+ L
Sbjct: 124 KNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++KI+ L+ LQ ++P D +++LDEAI Y+Q L+L+ L
Sbjct: 12 RHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE +DY++ L+L+ L
Sbjct: 258 RRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE +DY++ L+L+ L
Sbjct: 257 RRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVL 301
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 208 GDDDYSNGDDSEDDEVKSTDHSPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQK 261
GD D + + D S S IEG + E + +I + +S+G NKRQK
Sbjct: 38 GDADLTTAANG-DPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQK 96
Query: 262 LLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--------- 312
+ D C +G E ++ Q + D+I
Sbjct: 97 I-----------DEVC----DGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSH 141
Query: 313 ----QSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N +L LDE I+Y+QSL+
Sbjct: 142 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 187
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI +++LQ ++PG N GK S+LDE I+Y+QSL+
Sbjct: 140 RARREKISERMKVLQDLVPGCNKVIGK--ASVLDEIINYIQSLQ 181
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI +++LQ ++PG N GK S+LDE I+Y+QSL+
Sbjct: 142 RARREKISERMKVLQDLVPGCNKVIGK--ASVLDEIINYIQSLQ 183
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 280 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 322
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I+ LRILQ ++P D ++L+EA++Y++ L+L+ L
Sbjct: 226 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 272
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 272 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 308
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 199 RRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 245
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L
Sbjct: 151 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 76 RRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 122
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 144 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 190
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE ID+++ L+L+ L +
Sbjct: 338 RREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKVLSM 384
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L
Sbjct: 151 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQS 351
+ R+D+I+ ++ LQ +IP ++ D S+L+EAI+YL+S
Sbjct: 211 RRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKS 249
>gi|357468081|ref|XP_003604325.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355505380|gb|AES86522.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 331
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 284 SHECDNDAE------SGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKD 337
SHE + +E +G G++ + ID I+ + R+ ++ L IPG + D
Sbjct: 124 SHESNQKSEMKINQQNGVKRGRSSSQCIDHIMAE-RKRRQELSEKFIALSATIPGLSKTD 182
Query: 338 PLSLLDEAIDYLQSLK 353
S+L EAIDY++ LK
Sbjct: 183 KASILREAIDYVKQLK 198
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 208 GDDDYSNGDDSEDDEVKSTDHSPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQK 261
GD D + + D S S IEG + E + +I + +S+G NKRQK
Sbjct: 44 GDADLTTAANG-DPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQK 102
Query: 262 LLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--------- 312
+ D C +G E ++ Q + D+I
Sbjct: 103 I-----------DEVC----DGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSH 147
Query: 313 ----QSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N +L LDE I+Y+QSL+
Sbjct: 148 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P +N D S+LDE IDY++ L+L+ L
Sbjct: 50 RRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 94
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 282 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 150 RRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 196
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 279 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 321
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P +N D S+LDE IDY++ L+L+ L
Sbjct: 49 RRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 93
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQS 351
+ R+D+I+ ++ LQ +IP ++ D S+L+EAI+YL+S
Sbjct: 78 RRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKS 116
>gi|13346180|gb|AAK19612.1|AF336279_1 GHDEL61 [Gossypium hirsutum]
Length = 624
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++KI+ L IL+ ++P + D +S+LD+ I+YLQ L+ + L
Sbjct: 430 RRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLERRVEEL 476
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 282 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324
>gi|380006417|gb|AFD29599.1| DEL61 [Gossypium arboreum]
Length = 603
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++KI+ L IL+ ++P + D +S+LD+ I+YLQ L+ + L
Sbjct: 430 RRRREKINERLTILKSLVPTNSKADKVSILDDTIEYLQDLERRVEEL 476
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 212 RKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ 254
>gi|148908917|gb|ABR17563.1| unknown [Picea sitchensis]
Length = 484
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 47/204 (23%)
Query: 188 GKECEMHEDTEEINALLYSDGDDDYSNGDD-----SEDDEVKSTDHSPVA--IEGKYEKH 240
G + + HEDT ++ ALL SD ++D S G + D + + D + ++ I K +
Sbjct: 276 GYQSQSHEDTRDLEALLGSDEEEDDSTGHTPSEAITNDQQSGTQDEAHISNGIPTKKRRC 335
Query: 241 DLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTAC---------SVQLEGSHECDNDA 291
+ +EV + +LNG +D C +QLE C+
Sbjct: 336 ECMEFGEQEVDFIPSAIQETAVLNG----KCSSDGVCFPPVASQESGIQLEC---CNTVK 388
Query: 292 ESGYANGQTQKEEIDFILGNMQS--------------------RKDKIHTALRILQGIIP 331
+S Y + Q D+ NM RK+K+ A+ +L+ I+P
Sbjct: 389 DSDYRDEQF----CDYSTDNMTGNGSSNNSGSKVGQPSSRRKLRKEKVKKAINLLRSIVP 444
Query: 332 GANGKDPLSLLDEAIDYLQSLKLK 355
+ D ++L+ A +L+SL+LK
Sbjct: 445 EGHSMDTAAVLEVASQHLKSLQLK 468
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
Q R+ KI+ L+ LQ ++PG + + S LD+ I Y++SL+ + A+ V
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSV 271
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 133 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 179
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE IDY++ L+++ L
Sbjct: 162 RRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVL 206
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 281 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 323
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 233
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ ++P ++ D S+LD+AI+YL+ L+L+ L +
Sbjct: 75 KRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 123
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 98 QPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVN 157
Q FPC + A ++ G + + D+ N + ++S+ ++ L +E+S
Sbjct: 62 QYPFPCIAAAAAVYDDYYGHNHMSMSIIDEDNNNLESIFSA------SSTEFLLQEISST 115
Query: 158 GFLQDKAIKRDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDD 217
GF +D K V+ L +E D+N + H + ++++ D D N
Sbjct: 116 GFSEDH--KFLNMDIVQTHLGDEDDDNPL------FHHKRK--SSIVAPDDHDHDQNQLI 165
Query: 218 SEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTAC 277
+ +++++++ ++ K K + S++V+S+ +R+K N S D
Sbjct: 166 KPNKKIRTSNN----VQIKSRKGTESSGNSKKVSST----RRRKCEEEQENGRSSCDMNS 217
Query: 278 SVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKD 337
S + +N+A T+ D + R+++I+ LRILQ ++P D
Sbjct: 218 CSSDNSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD 277
Query: 338 PLSLLDEAIDYLQSLKLKAVAL 359
++L+EA+ Y++ L+L+ L
Sbjct: 278 ISTMLEEAVHYVKFLQLQIKLL 299
>gi|357464903|ref|XP_003602733.1| hypothetical protein MTR_3g098450 [Medicago truncatula]
gi|355491781|gb|AES72984.1| hypothetical protein MTR_3g098450 [Medicago truncatula]
Length = 67
Score = 38.9 bits (89), Expect = 3.9, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 308 ILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAI 346
+ GN + RK KI + ILQ II G + KDP+ LLDEAI
Sbjct: 4 LTGNKKMRKRKIQDLITILQCIISGED-KDPIQLLDEAI 41
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 263 LNGGYNKSSQTDTACSVQLEG----SHECDNDAESGYANGQTQKEEIDFILGNMQSRKDK 318
LNGG + S + ++ L G S D +S YA + R+++
Sbjct: 185 LNGGASSSLSSKGDAALNLNGKTRASRGAATDPQSIYA----------------RKRRER 228
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 229 INERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 265
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 280 RKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ 322
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 98 QPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVN 157
Q FPC + A ++ G + + D+ N + ++S+ ++ L +E+S
Sbjct: 62 QYQFPCIAAAAAVYDDYYGHNHMSMSIIDEDNNNLESIFSA------SSTEFLLQEISST 115
Query: 158 GFLQDKAIKRDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDD 217
GF +D K V+ L +E D+N + H + ++++ D D N
Sbjct: 116 GFSEDH--KFLNMDIVQTHLGDEDDDNPL------FHHKRK--SSIVAPDDHDHDQNQLI 165
Query: 218 SEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTAC 277
+ +++++++ ++ K K + S++V+S+ +R+K N S D
Sbjct: 166 KPNKKIRTSNN----VQIKSRKGTESSGNSKKVSST----RRRKCEEEQENGRSSCDMNS 217
Query: 278 SVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKD 337
S + +N+A T+ D + R+++I+ LRILQ ++P D
Sbjct: 218 CSSDNSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD 277
Query: 338 PLSLLDEAIDYLQSLKLKAVAL 359
++L+EA+ Y++ L+L+ L
Sbjct: 278 ISTMLEEAVHYVKFLQLQIKLL 299
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P AN D +++DE +DY++ L+L+ L +
Sbjct: 181 RRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVLSM 227
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 270 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQ 306
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 263 LNGGYNKSSQTDTACSV--QLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIH 320
LNGG S+ A + + S D +S YA + R+++I+
Sbjct: 73 LNGGTTSESKGSAALNSNGKTRASRGSATDPQSLYA----------------RKRRERIN 116
Query: 321 TALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 117 ERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 151
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L
Sbjct: 142 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 186
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 280 QLEGSHECDNDAESGYA----NGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANG 335
Q++ + DN+ + + NG+ + D + R+ +I+ LRILQ +IP
Sbjct: 74 QVDQERDHDNEVHAALSAPRKNGKKSRAAKDSQSHYAKKRRQRINERLRILQKLIPNGTK 133
Query: 336 KDPLSLLDEAIDYLQSLKLKAVALG 360
D ++L+EA+ Y++ L L+ L
Sbjct: 134 VDISTMLEEAVQYVKFLHLQIKLLS 158
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+D+I+ ++ LQ ++P ++ D S+LDE ID+L+ L+
Sbjct: 272 RKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+D+I+ ++ LQ ++P ++ D S+LDE ID+L+ L+
Sbjct: 272 RKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 42 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 88
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 175 RRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSM 221
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 303 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 345
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 303 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 345
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 253 RKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 276 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQ 312
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I +R LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 134 RRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 180
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 253 RKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P AN D S+LDE I Y++ L+L+ L
Sbjct: 48 RRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P +N D ++LDE +DY++ L+L+ L
Sbjct: 193 RRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 237
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 211 DYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKS 270
D+S+ D+E T +K + ++++EV D +++K NG N S
Sbjct: 72 DHSSKVSLSDNETSLTKKQSTGSSTVVDKLETGEQVTQEVTPVD---RKRKTTNGSLN-S 127
Query: 271 SQTDTACSVQLEGSHECDNDAE-----------------SGYANGQTQK-EEIDFILGNM 312
+Q+ V+ + +C D + +GY + + ++ + D
Sbjct: 128 AQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAE 187
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
+ R++KI +++LQ ++PG + +L LDE I+Y+QSL+
Sbjct: 188 RVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQ 229
>gi|302784356|ref|XP_002973950.1| hypothetical protein SELMODRAFT_414431 [Selaginella moellendorffii]
gi|300158282|gb|EFJ24905.1| hypothetical protein SELMODRAFT_414431 [Selaginella moellendorffii]
Length = 283
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+SR+ I +++L+ IIPG G + S+L+E I Y+ SL+
Sbjct: 220 KSRRQTIKYKIQVLRNIIPGGAGMEAASVLEETIRYITSLE 260
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 35/145 (24%)
Query: 229 SPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLE 282
S IEG + E + +I + +S+G NKRQK+ D C +
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQKI-----------DEVC----D 108
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNM-------------QSRKDKIHTALRILQGI 329
G E ++ Q + D+I ++R++KI ++ILQ +
Sbjct: 109 GKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
Query: 330 IPGANGKDPLSL-LDEAIDYLQSLK 353
+PG N +L LDE I+Y+QSL+
Sbjct: 169 VPGCNKVIGKALVLDEIINYIQSLQ 193
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 35/145 (24%)
Query: 229 SPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLE 282
S IEG + E + +I + +S+G NKRQK+ D C +
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQKI-----------DEVC----D 108
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNM-------------QSRKDKIHTALRILQGI 329
G E ++ Q + D+I ++R++KI ++ILQ +
Sbjct: 109 GKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
Query: 330 IPGANGKDPLSL-LDEAIDYLQSLK 353
+PG N +L LDE I+Y+QSL+
Sbjct: 169 VPGCNKVIGKALVLDEIINYIQSLQ 193
>gi|389827984|gb|AFL02462.1| transcription factor MYC1 [Fragaria x ananassa]
Length = 368
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++K++ IL+ ++P D +S+LD+AI+YL+ L+ K L
Sbjct: 175 RKRREKLNERFSILKSLVPSIRKDDKVSILDDAIEYLKDLEKKVEEL 221
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 18/87 (20%)
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNMQ-------------SRKDKIHTALRILQGI 329
G+ E +D + G ++ +++D+I + +R++KI ++ LQ +
Sbjct: 160 GNTEASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDL 219
Query: 330 IPGAN---GKDPLSLLDEAIDYLQSLK 353
+PG N GK +LDE I+Y+QSL+
Sbjct: 220 VPGCNKVTGK--AGMLDEIINYVQSLQ 244
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++KI ++ LQ ++P +N D S+LDE I+Y++ L+L+ L
Sbjct: 167 RREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVL 211
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 159 RRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSM 205
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P +N D ++LDE +DY++ L+L+ L
Sbjct: 169 RRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVL 213
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++KI ++ LQ ++P +N D S+LDE I+Y++ L+L+ L
Sbjct: 314 RREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVL 358
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
+ R+++I+ L+ILQ ++P D ++L+EA+ Y++ L+L+ L
Sbjct: 240 RKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 287
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ L+ILQ ++P D ++L+EA++Y++ L+L+
Sbjct: 270 RKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQ 312
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ KI+ L+ LQ ++PG + + S LD+ I Y++SL+ + A+ V
Sbjct: 202 KRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQAMSV 250
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 235 GKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESG 294
G+ D + ++ ++ NK+QK+ G + + A + SH G
Sbjct: 114 GRQPMADDSWDVPMMGTTATATNKKQKVTPEGKMGTEEMRKAPAGGSSRSHH-------G 166
Query: 295 YANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKL 354
A+ T+K R+ KI+ L+ LQ ++PG + + S LD+ I Y++SL+
Sbjct: 167 EAHNLTEKR-----------RRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQH 215
Query: 355 KAVALGV 361
+ A+ V
Sbjct: 216 QVQAMSV 222
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ L+ILQ ++P D ++L+EA++Y++ L+L+
Sbjct: 271 RKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQ 313
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI ++ILQ I+PG N GK +LDE I+Y+QSL+
Sbjct: 153 RARREKISERMKILQDIVPGCNKVIGK--ALVLDEIINYIQSLQ 194
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D ++LDE +DY++ L+L+ L +
Sbjct: 160 RRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSM 206
>gi|357145748|ref|XP_003573752.1| PREDICTED: transcription factor bHLH18-like [Brachypodium
distachyon]
Length = 307
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLL 342
GS+ C + + +G+ I + + + R++K+H L IIP D +SLL
Sbjct: 105 GSYYCPSPSSEKRLSGRRTSLSIQEHVASERRRREKMHHQFATLASIIPDIAKTDKVSLL 164
Query: 343 DEAIDYLQSL--KLKAV 357
AI Y+ L KLKA+
Sbjct: 165 GSAIQYVHKLEEKLKAL 181
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
I+ ++ LQ +IP + D S+LDEAIDYL+SL
Sbjct: 218 INERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
I+ ++ LQ +IP + D S+LDEAIDYL+SL
Sbjct: 218 INERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R++K++ IL+ I+P + D +S+LD+ I YLQ L+ K
Sbjct: 434 RRRREKLNKRFMILKSIVPSISKVDKVSILDDTIQYLQELERKV 477
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ILQ ++PG D +S+LDEAI Y++ L+ L
Sbjct: 57 FKILQSMVPGGKNMDTVSMLDEAIQYVKFLQFMHFWL 93
>gi|224112459|ref|XP_002316199.1| predicted protein [Populus trichocarpa]
gi|222865239|gb|EEF02370.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALG 360
+ R+D+I+ L IL+ ++P + D +LL AID+++ LK KA +
Sbjct: 76 KRRRDRINAQLGILRKLVPKSEKMDKAALLGSAIDHVKDLKQKATEIS 123
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 153 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 202
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++ AN D S+LDE IDY++ L+L+ +++
Sbjct: 163 RRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLSM 207
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 141 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 190
>gi|51969404|dbj|BAD43394.1| unknown protein [Arabidopsis thaliana]
Length = 44
Score = 37.7 bits (86), Expect = 8.4, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 1 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 37
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 269 KSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM-----------QSRKD 317
K S+T+ + L G E+ ++ G+ KE + + R++
Sbjct: 204 KKSRTEQNTAANLRGKQAAKQAKENSHS-GEAPKENYIHVRARRGQATNSHSLAERVRRE 262
Query: 318 KIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
KI +R+LQ ++PG N GK +LDE I+Y+QSL+
Sbjct: 263 KISERMRLLQELVPGCNKITGK--AVMLDEIINYVQSLQ 299
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++P +N D S+LDE I+Y++ L+L+ L +
Sbjct: 258 RREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSM 304
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 285 HECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDE 344
H+ D +SGY G E + L + R++K++ L+ +IP + D +S+LD+
Sbjct: 391 HQKDTPEDSGYKVGD---ETANHALSE-RKRREKLNDRFMTLRSMIPSISKIDKVSILDD 446
Query: 345 AIDYLQSLKLKAVAL 359
I+YLQ L+ + L
Sbjct: 447 TIEYLQELQRRVQEL 461
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 252 SSDGPNKRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGN 311
+S+GP + +K G N + SV+ DN+++SG A KE +
Sbjct: 215 ASNGPKEHEKRPKGEQNNGADVRGKQSVK----QAKDNNSQSGEA----PKENFIHVRAR 266
Query: 312 M-----------QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
+ R++KI +R+LQ ++PG N GK +LDE I+Y+QSL+
Sbjct: 267 RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK--AVMLDEIINYVQSLQ 320
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 206
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 206
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 206
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI + ILQ ++PG N GK S+LDE I+Y+Q+L+
Sbjct: 147 RARREKISERMNILQDLVPGCNKVIGK--ASVLDEIINYIQALQ 188
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 206
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R++KI ++ LQ ++P +N D S+LDE I+Y++ L+L+ L
Sbjct: 316 RREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVL 360
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,121,040,672
Number of Sequences: 23463169
Number of extensions: 268828582
Number of successful extensions: 796866
Number of sequences better than 100.0: 974
Number of HSP's better than 100.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 794674
Number of HSP's gapped (non-prelim): 1906
length of query: 361
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 217
effective length of database: 8,980,499,031
effective search space: 1948768289727
effective search space used: 1948768289727
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)