BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036175
(361 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FY69|BH143_ARATH Transcription factor bHLH143 OS=Arabidopsis thaliana GN=BHLH143
PE=2 SV=1
Length = 326
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 25/331 (7%)
Query: 28 LDPRQPECLPSLIAPENYMFSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQNLV 87
LD +Q + LP + P+ + Y PG + ++ A + L P FQ L+
Sbjct: 3 LDTKQQKWLPLGLNPQACVQDKATE---YFRPGIPFPELGKVYAAEHQFRYLQPPFQALL 59
Query: 88 ASPYPYLNEIQPAFPCGFSEQ-AAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNT 146
+ Q + G S AAP L S +K +VFDQSG QT+L+ C L
Sbjct: 60 SRYDQQSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQSGEQTRLLQ---CGFPLRF 116
Query: 147 PATLKKEV-SVNGFLQ-DKAIKRDQFTSVKPLLHEEFDENHISGKE-CEMHEDTEEINAL 203
P+++ E ++ G L +K +D K L HE +H +G+E EMHEDTEEINAL
Sbjct: 117 PSSMDAERGNILGALHPEKGFSKDHAIQEKILQHE----DHENGEEDSEMHEDTEEINAL 172
Query: 204 LYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPN-KRQKL 262
LYSD DD+ DDEV ST HSP +E + + T E+ E ++ DGP KRQKL
Sbjct: 173 LYSDDDDNDDW---ESDDEVMSTGHSPFTVE-QQACNITTEELDETESTVDGPLLKRQKL 228
Query: 263 LNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSRKDKIHTA 322
L+ Y SS + + +++G + +N ES ++ K+E L + QSRKDKIHTA
Sbjct: 229 LDHSYRDSSPS-LVGTTKVKGLSD-ENLPESNISS----KQETGSGLSDEQSRKDKIHTA 282
Query: 323 LRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
LRIL+ ++PGA GK+ L LLDEAIDYL+ LK
Sbjct: 283 LRILESVVPGAKGKEALLLLDEAIDYLKLLK 313
>sp|Q9FMF4|SAC51_ARATH Transcription factor SAC51 OS=Arabidopsis thaliana GN=SAC51 PE=2
SV=1
Length = 348
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 171/346 (49%), Gaps = 42/346 (12%)
Query: 28 LDPRQPECLPSLIAPENYM--FSANAALPGYVSPGFANLKTEQINGAHKALQILPPRFQN 85
LD RQ + LP ++P+ + LP P L ++ + LQ PP FQ+
Sbjct: 3 LDKRQRD-LPLGLSPQACFKDIVGRSVLPRIPLPELGKLYAAKLQA--RCLQ--PPPFQS 57
Query: 86 LVAS------PYPYLNEIQPAFPCGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSV 139
L+ S + ++ + P L S QK LL+FDQSG+QT+L+
Sbjct: 58 LLCSHDKESYGKRFSRSDMRSWCAAATTTTTPLGALESSQKRLLIFDQSGDQTRLLQ--- 114
Query: 140 CPSVLNTPATLKKEVSVNGFLQDKAIKRDQFTSVKPLLHEEFDENHIS-GKECEMHEDTE 198
CP L P+ E +K + ++ E+ +E H S G E EMHEDTE
Sbjct: 115 CPFPLRFPSHAAAE----------PVKLSELQGIEKAFKEDGEEFHKSDGTESEMHEDTE 164
Query: 199 EINALLYSDGDDDYSNGDDSEDDEVKSTDHSPVAIEGKYEKHDLTLEISEEVASSDGPNK 258
EINALLYSD D D DDEV ST HSP EG K +L EE+ DGP K
Sbjct: 165 EINALLYSDDDYDDDC---ESDDEVMSTGHSPYPNEGVCNKREL-----EEI---DGPCK 213
Query: 259 RQKLL---NGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNMQSR 315
RQKLL N + SS T S QL GS D + + + KE+ L N QS+
Sbjct: 214 RQKLLDKVNNISDLSSLVGTESSTQLNGSSFL-KDKKLPESKTISTKEDTGSGLSNEQSK 272
Query: 316 KDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
KDKI TAL+IL+ ++PGA G + L LLDEAIDYL+ LK ++ V
Sbjct: 273 KDKIRTALKILESVVPGAKGNEALLLLDEAIDYLKLLKRDLISTEV 318
>sp|Q9FGB0|BH145_ARATH Transcription factor bHLH145 OS=Arabidopsis thaliana GN=BHLH145
PE=2 SV=1
Length = 311
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 142/319 (44%), Gaps = 63/319 (19%)
Query: 46 MFSANAA--LPGYVSPGFANLKTEQINGA-HKALQILPPRFQNLVASPYPYLNEIQPAFP 102
MFS + + VS + + ++G+ H Q LPP+ Q + P I A
Sbjct: 43 MFSTRGSYQVSTQVSQSYFDGYCGWVHGSSHLQQQFLPPQNQCMKQVPLQVDGVISKA-- 100
Query: 103 CGFSEQAAPNEKLGSLQKGLLVFDQSGNQTQLVYSSVCPSVLNTPATLKKEVSVNGFLQD 162
EQ + QK LVFDQSG+QT L+ +S + + TLK+ + +
Sbjct: 101 ---EEQCS--------QKRFLVFDQSGDQTTLLLAS---DIRKSFETLKQHACPDMKEEL 146
Query: 163 KAIKRDQFTSVKPLLHEEFDENHISGKECEMHEDTEEINALLYSDGDDDYSNGDDSEDDE 222
+ +D F E ++ ED+EE+NALLYS+ + Y SE+DE
Sbjct: 147 QRSNKDLFVC----------HGMQGNSEPDLKEDSEELNALLYSEDESGYC----SEEDE 192
Query: 223 VKSTDHSP-VAIEGKYEKHDLTLEISEEVASSDGPNKRQKLLNGGYNKSSQTDTACSVQL 281
V S DHSP + + G+ + QK G Y + + L
Sbjct: 193 VTSADHSPSIVVSGRED---------------------QKTFLGSYGQP--LNAKKRKIL 229
Query: 282 EGSHECDNDAESGYANGQTQKEEIDFI----LGNMQSRKDKIHTALRILQGIIPGANGKD 337
E S+E DAES + G I F+ L + + ++KI + +L+ ++PG D
Sbjct: 230 ETSNESMRDAES--SCGSCDNTRISFLKRSKLSSNKIGEEKIFETVSLLRSVVPGEELVD 287
Query: 338 PLSLLDEAIDYLQSLKLKA 356
P+ ++D AIDYL+SLK++A
Sbjct: 288 PILVIDRAIDYLKSLKMEA 306
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 292 ESGYANGQTQKEEIDFILGNM--QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYL 349
SG + K ID N+ + R+ KI+ ++ LQ +IP +N D S+LDEAI+YL
Sbjct: 80 RSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYL 139
Query: 350 QSLKLKAVALGV 361
+ L+L+ L V
Sbjct: 140 KQLQLQVQTLAV 151
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+I+ +R LQ +IP N D S+LDEAI+YL+SL+L+ + +
Sbjct: 353 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSM 401
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+D+I+ ++ LQ +IP N D S+LDEAI+Y++SL+L+
Sbjct: 294 RKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +R+LQ ++PG D S+LDEA +YL+ L+ + AL
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+ +I+ ++ LQ +IP +N D S+LDEAI+YL+ L+L+ L +
Sbjct: 207 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+ R+D+ + +R LQ ++P D SLLDEAI Y+++L+L+ + +
Sbjct: 239 RKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ +I +ILQ ++PG D +S+LDEAI Y++ LK
Sbjct: 53 RDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLK 93
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+DKI+ ++ LQ ++P ++ D S+LDE I+YL+ L+
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R+++I +RIL+ I+PG D S+LDEAI Y + LK + L
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>sp|Q9ASX9|BH144_ARATH Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144
PE=1 SV=1
Length = 251
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 325 ILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
+L+ I+PG + +LDEA+ YL+SLK++A LGV
Sbjct: 208 VLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 244
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L +
Sbjct: 148 RRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
I+ ++ LQ +IP + D S+LDEAIDYL+SL+L+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 309
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 208 GDDDYSNGDDSEDDEVKSTDHSPVAIEG------KYEKHDLTLEISEEVASSDGPNKRQK 261
GD D + + D S S IEG + E + +I + +S+G NKRQK
Sbjct: 44 GDADLTTAANG-DPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQK 102
Query: 262 LLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGNM--------- 312
+ D C +G E ++ Q + D+I
Sbjct: 103 I-----------DEVC----DGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSH 147
Query: 313 ----QSRKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLK 353
++R++KI ++ILQ ++PG N +L LDE I+Y+QSL+
Sbjct: 148 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 268 NKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEIDFILGN---------MQSRKDK 318
NK + + T+ ++ + H D D ES + D +GN +SR +
Sbjct: 200 NKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAE 259
Query: 319 IHT------------ALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+H ++ LQ +IP + D S+LDEAIDYL+SL+++
Sbjct: 260 VHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
R+++I ++ LQ ++P N D S+LDE IDY++ L+L+ L
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 282 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R++KI+ ++ LQ +IP N +S LD+AI+Y++SL+
Sbjct: 265 RRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQ 305
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R+++I+ LRILQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 253 RKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++K++ L+ IIP N D +S+LD+ I+YLQ L+ + L
Sbjct: 447 KKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAV 357
+ R+ +I R+L+ ++PG + D +S+L++AI Y++ LK +
Sbjct: 50 RERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVT 94
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
R+++I ++ LQ ++P N D S+LDE I+Y++ L+L+ L +
Sbjct: 117 RRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSM 163
>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
Length = 363
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 32/44 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+++++ I+ +R LQ ++P ++ D S+LDEAI+Y+ +L+L+
Sbjct: 198 RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQV 241
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI ++ LQ I+PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGK--AGMLDEIINYVQSLQQQVEFLSM 206
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 283 GSHECDNDAESGYANGQTQKEEIDFILGNMQ-------------SRKDKIHTALRILQGI 329
G+ E +D + G ++ +++D+I + +R++KI ++ LQ I
Sbjct: 158 GNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 217
Query: 330 IPGAN---GKDPLSLLDEAIDYLQSLK 353
+PG N GK +LDE I+Y+Q L+
Sbjct: 218 VPGCNKVTGK--AGMLDEIINYVQCLQ 242
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 310 GNMQSRKD-KIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
G+ + R+D K+ +R LQ ++P + D +S+LD+ I+Y+++L+L+
Sbjct: 140 GSKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQ 186
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 5/42 (11%)
Query: 315 RKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
R++KI +R+LQ ++PG N GK +LDE I+Y+QSL+
Sbjct: 224 RREKISERMRLLQELVPGCNKITGK--AVMLDEIINYVQSLQ 263
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 31/43 (72%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R++KI+ ++ LQ +IP N +S+L++ I+Y++SL+++
Sbjct: 160 RRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQ 202
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 32/49 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R+++I L+ILQ ++P D +++L++AI Y++ L+++ L
Sbjct: 211 KNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLAT 259
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
+ R++K++ L+ IIP + D +S+LD+ I+YLQ L+ + L
Sbjct: 411 KKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLKLKAVALGV 361
R++KI +++LQ ++PG N +L LDE I+Y+QSL+ + L +
Sbjct: 276 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 315 RKDKIHTALRILQGIIPGANGKDPLSL-LDEAIDYLQSLKLKAVALGV 361
R++KI +++LQ ++PG N +L LDE I+Y+QSL+ + L +
Sbjct: 319 RREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 32/49 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R+++I L++LQ ++P D +++L++AI Y++ L+++ L
Sbjct: 217 KNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAA 265
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
++R++KI + +LQ ++PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGK--AVMLDEIINYVQSLQRQVEFLSM 256
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 315 RKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLKLKAVALGV 361
R++KI ++ LQ ++PG N GK +LDE I+Y+QSL+ + L +
Sbjct: 321 RREKISERMKFLQDLVPGCNKVTGK--AVMLDEIINYVQSLQRQVEFLSM 368
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 29/43 (67%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R++KI+ L+ LQ ++P D ++L+EA+ Y++ L+L+
Sbjct: 183 RKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 225
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 313 QSRKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
++R++KI + LQ IIPG N GK +LDE I+Y+QSL+
Sbjct: 169 RARREKISEKMTALQDIIPGCNKIIGK--ALVLDEIINYIQSLQ 210
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R++K++ L+ I+P + D SLL +A+ Y++SLK K
Sbjct: 255 KQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSK 297
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAV 357
+ R++K++ L+ ++P + D SLL +AI Y+ LK K V
Sbjct: 458 RQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVV 502
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
+ R+ KI+ ++ LQ ++P D S+LD+ I+Y++SL+
Sbjct: 287 RRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQ 327
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 315 RKDKIHTALRILQGIIPGAN---GKDPLSLLDEAIDYLQSLK 353
R++KI ++ LQ ++PG + GK +LDE I+Y+QSL+
Sbjct: 190 RREKISERMKFLQDLVPGCDKITGK--AGMLDEIINYVQSLQ 229
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 326 LQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
LQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 151 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>sp|O80482|BH149_ARATH Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149
PE=1 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 310 GNMQSRKDKIHT----------ALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
GN +SRK T L+IL ++PG +LLDEA DY+ +L+++ A+
Sbjct: 129 GNCKSRKGLTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAM 188
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKA 356
+ R++K++ L+ ++P + D SLL++A+ Y+ LK KA
Sbjct: 349 RMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKA 392
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 319 IHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 353
I+ +R LQ ++P A+ D +S+LD+ I++L+ L+
Sbjct: 182 INQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ 216
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSL 352
+ R+ K++ L +L+ ++P + D S+L +AIDYL+ L
Sbjct: 273 RRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 312
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 313 QSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLK 355
+ R++K++ L+ ++P + D SLL +AI Y+ LK K
Sbjct: 422 RQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSK 464
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 326 LQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVAL 359
LQ ++PG D S+LDEAI Y++ LK + +L
Sbjct: 148 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,484,453
Number of Sequences: 539616
Number of extensions: 6433843
Number of successful extensions: 21017
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 20148
Number of HSP's gapped (non-prelim): 813
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)